NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070529

Metagenome / Metatranscriptome Family F070529

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070529
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 39 residues
Representative Sequence CPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Number of Associated Samples 116
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 9.76 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 99.19 %
Associated GOLD sequencing projects 115
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.561 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(34.959 % of family members)
Environment Ontology (ENVO) Unclassified
(35.772 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.650 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.05%    β-sheet: 2.63%    Coil/Unstructured: 76.32%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF13936HTH_38 84.55
PF04392ABC_sub_bind 1.63
PF13924Lipocalin_5 1.63
PF00578AhpC-TSA 1.63
PF03401TctC 0.81
PF07282OrfB_Zn_ribbon 0.81
PF04986Y2_Tnp 0.81
PF05598DUF772 0.81
PF01527HTH_Tnp_1 0.81
PF00903Glyoxalase 0.81
PF09423PhoD 0.81
PF07536HWE_HK 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.63
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.81
COG3920Two-component sensor histidine kinase, HisKA and HATPase domainsSignal transduction mechanisms [T] 0.81
COG4251Bacteriophytochrome (light-regulated signal transduction histidine kinase)Signal transduction mechanisms [T] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.56 %
UnclassifiedrootN/A2.44 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000532|CNAas_1013245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila570Open in IMG/M
3300000596|KanNP_Total_noBrdU_T14TCDRAFT_1008797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNJC394B001124Open in IMG/M
3300000651|AP72_2010_repI_A10DRAFT_1010174All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300000652|ARCol0yngRDRAFT_1008900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila725Open in IMG/M
3300000709|KanNP_Total_F14TBDRAFT_1002554All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300000912|JGI12032J12867_1005712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila727Open in IMG/M
3300001661|JGI12053J15887_10146420All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300002075|JGI24738J21930_10059085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila786Open in IMG/M
3300005566|Ga0066693_10296826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila645Open in IMG/M
3300005578|Ga0068854_101708360All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila575Open in IMG/M
3300006038|Ga0075365_10176527All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300006038|Ga0075365_10666014All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300006172|Ga0075018_10091700All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300006880|Ga0075429_100495509Not Available1070Open in IMG/M
3300006914|Ga0075436_100250151All Organisms → cellular organisms → Bacteria1262Open in IMG/M
3300009094|Ga0111539_13222429All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria526Open in IMG/M
3300009100|Ga0075418_10676241All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300009100|Ga0075418_12071583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium620Open in IMG/M
3300010159|Ga0099796_10536375All Organisms → cellular organisms → Bacteria → Proteobacteria526Open in IMG/M
3300010379|Ga0136449_101046109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1307Open in IMG/M
3300012924|Ga0137413_10161331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L2C054A0001474Open in IMG/M
3300018466|Ga0190268_10109121All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300019871|Ga0193702_1009720All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300019875|Ga0193701_1023267All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300019877|Ga0193722_1037275All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300019879|Ga0193723_1068176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNJC394B001028Open in IMG/M
3300019881|Ga0193707_1055030All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300019883|Ga0193725_1035757All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300019887|Ga0193729_1078605All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300019890|Ga0193728_1110948All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300019997|Ga0193711_1028644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila700Open in IMG/M
3300019999|Ga0193718_1026075All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300020000|Ga0193692_1030131All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300020001|Ga0193731_1038154All Organisms → cellular organisms → Bacteria1268Open in IMG/M
3300020002|Ga0193730_1045144All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300020004|Ga0193755_1030076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1797Open in IMG/M
3300020006|Ga0193735_1050343All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300020015|Ga0193734_1056146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila716Open in IMG/M
3300020021|Ga0193726_1113661All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300020022|Ga0193733_1044465All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300020579|Ga0210407_10443228All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300020581|Ga0210399_10333341All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300021080|Ga0210382_10041434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1778Open in IMG/M
3300021082|Ga0210380_10072414All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300021086|Ga0179596_10293808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila809Open in IMG/M
3300021168|Ga0210406_10308788All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300021170|Ga0210400_10325492All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300021178|Ga0210408_10307255All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300021344|Ga0193719_10208811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila832Open in IMG/M
3300021404|Ga0210389_10405413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNJC394B001072Open in IMG/M
3300021415|Ga0193694_1011698All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300021418|Ga0193695_1025621All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300021432|Ga0210384_10379155All Organisms → cellular organisms → Bacteria1273Open in IMG/M
3300021478|Ga0210402_10403307All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300021479|Ga0210410_10379253All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300021559|Ga0210409_10337529All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300024288|Ga0179589_10077290All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300024288|Ga0179589_10085956All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300024432|Ga0209977_10097347All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300025898|Ga0207692_10420906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila836Open in IMG/M
3300025928|Ga0207700_10364884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium1260Open in IMG/M
3300025937|Ga0207669_10279408All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300025938|Ga0207704_10610252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila894Open in IMG/M
3300025961|Ga0207712_10640881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila923Open in IMG/M
3300025972|Ga0207668_10742278All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila865Open in IMG/M
3300025981|Ga0207640_11475788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila610Open in IMG/M
3300026285|Ga0209438_1053665All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300026301|Ga0209238_1060648All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300026340|Ga0257162_1007283All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300026341|Ga0257151_1013198All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila862Open in IMG/M
3300026355|Ga0257149_1009572All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300026356|Ga0257150_1010821All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300026480|Ga0257177_1010602All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300026481|Ga0257155_1008977All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300026497|Ga0257164_1006464All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300026995|Ga0208761_1007094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila893Open in IMG/M
3300027310|Ga0207983_1017932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila844Open in IMG/M
3300027903|Ga0209488_10449392Not Available949Open in IMG/M
3300027903|Ga0209488_11115642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria537Open in IMG/M
3300028380|Ga0268265_10819308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila908Open in IMG/M
3300028589|Ga0247818_10227280All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300028592|Ga0247822_10243615All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300028705|Ga0307276_10021210All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300028711|Ga0307293_10050691All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300028717|Ga0307298_10038437All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300028721|Ga0307315_10038054All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300028722|Ga0307319_10031256All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300028744|Ga0307318_10099222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria985Open in IMG/M
3300028754|Ga0307297_10026074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1686Open in IMG/M
3300028768|Ga0307280_10027978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1668Open in IMG/M
3300028790|Ga0307283_10025107All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300028799|Ga0307284_10023414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2004Open in IMG/M
3300028799|Ga0307284_10069057All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300028802|Ga0307503_10091960All Organisms → cellular organisms → Bacteria1272Open in IMG/M
3300028814|Ga0307302_10089162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1465Open in IMG/M
3300028872|Ga0307314_10031457All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300028880|Ga0307300_10042066All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300028884|Ga0307308_10110970All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300030847|Ga0075405_11603789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium1361Open in IMG/M
3300030902|Ga0308202_1008792All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300030966|Ga0075383_11266595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila796Open in IMG/M
3300031170|Ga0307498_10160734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila753Open in IMG/M
3300031199|Ga0307495_10012602All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300031199|Ga0307495_10031649Not Available977Open in IMG/M
3300031422|Ga0308186_1013331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila737Open in IMG/M
3300031546|Ga0318538_10465920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila684Open in IMG/M
3300031547|Ga0310887_10333574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila874Open in IMG/M
3300031640|Ga0318555_10120664All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300031744|Ga0306918_11132221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila605Open in IMG/M
3300031792|Ga0318529_10437733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila608Open in IMG/M
3300031797|Ga0318550_10613405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila522Open in IMG/M
3300031880|Ga0318544_10296329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila627Open in IMG/M
3300032052|Ga0318506_10399517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila609Open in IMG/M
3300032065|Ga0318513_10470602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila614Open in IMG/M
3300032068|Ga0318553_10153876All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300032076|Ga0306924_10583261All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300032205|Ga0307472_101173687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila731Open in IMG/M
3300032261|Ga0306920_100550663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1710Open in IMG/M
3300032261|Ga0306920_100793729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster1390Open in IMG/M
3300033290|Ga0318519_10646120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila644Open in IMG/M
3300033550|Ga0247829_10667997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila864Open in IMG/M
3300034151|Ga0364935_0023014All Organisms → cellular organisms → Bacteria1698Open in IMG/M
3300034818|Ga0373950_0060881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia psychrophila758Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil34.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.25%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.63%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.63%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.63%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000532Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300000596Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TCEnvironmentalOpen in IMG/M
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300000652Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNAHost-AssociatedOpen in IMG/M
3300000709Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondanceEnvironmentalOpen in IMG/M
3300000912Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019871Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020000Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026341Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-AEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026995Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)EnvironmentalOpen in IMG/M
3300027310Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030966Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031422Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
CNAas_101324513300000532Quercus RhizospherePLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
KanNP_Total_noBrdU_T14TCDRAFT_100879723300000596SoilSSGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
AP72_2010_repI_A10DRAFT_101017413300000651Forest SoilLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
ARCol0yngRDRAFT_100890023300000652Arabidopsis RhizosphereGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
KanNP_Total_F14TBDRAFT_100255423300000709SoilSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
JGI12032J12867_100571213300000912Forest SoilVGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
JGI12053J15887_1014642013300001661Forest SoilCPLSIGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
JGI24738J21930_1005908513300002075Corn RhizosphereAGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
Ga0066693_1029682613300005566SoilPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG*
Ga0068854_10170836013300005578Corn RhizosphereLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
Ga0075365_1017652713300006038Populus EndosphereMSDLSPKSGGGFNWSAQHLLILLDEEVADGDVTDIVHGE
Ga0075365_1066601423300006038Populus EndosphereMSALRPLPGGGFNWSAQHLLILLDEEVADGDVTDIIHGEAEGR
Ga0075018_1009170033300006172WatershedsCRANRAEQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
Ga0075429_10049550913300006880Populus RhizosphereMAPRPVLTGGFNWSAQHLLILLDEEVADGDVTDIIHG
Ga0075436_10025015113300006914Populus RhizospherePGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG*
Ga0111539_1322242923300009094Populus RhizosphereMSALRPLPGGGFNWSAQHLLILLDEEVADGDVTDIIHGEAEG
Ga0075418_1067624123300009100Populus RhizosphereMSDLSPKSGGGFNWSAQHLLILLDEEVADGDVTDIVHGEAEGR
Ga0075418_1207158323300009100Populus RhizosphereMSDLRPLSGDGFNWSAQHLLISLDEEVADGDVTDIVHGEAE
Ga0099796_1053637523300010159Vadose Zone SoilMAGSRPLCPGDLNRSTQHLLILLDKEVADGDVTDIV
Ga0136449_10104610913300010379Peatlands SoilMARQVLGGGFNWSAQHLLILLDEEVAHVDVPDIVHGEAEGR
Ga0137413_1016133133300012924Vadose Zone SoilMPRPRPLLPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAE
Ga0190268_1010912113300018466SoilHRKSADRLPFSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193702_100972023300019871SoilQGPLCPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193701_102326713300019875SoilVMLAQCPVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193722_103727513300019877SoilSGNPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193723_106817623300019879SoilTSLIWPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193707_105503013300019881SoilECLLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193725_103575713300019883SoilPSPLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193729_107860513300019887SoilRVEQCPVSEGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193728_111094823300019890SoilQCPVYSGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193711_102864423300019997SoilCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193718_102607523300019999SoilAQCPVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193692_103013113300020000SoilSRPDYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193731_103815423300020001SoilRANQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193730_104514423300020002SoilASRPVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193755_103007633300020004SoilRLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193735_105034323300020006SoilCPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193734_105614613300020015SoilIWPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193726_111366123300020021SoilVSPLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193733_104446513300020022SoilPVSEGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0210407_1044322813300020579SoilMALFCRASRATQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEA
Ga0210399_1033334113300020581SoilYLGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210382_1004143413300021080Groundwater SedimentAARLLCPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0210380_1007241423300021082Groundwater SedimentMPRPRPLLPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0179596_1029380813300021086Vadose Zone SoilTEGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0210406_1030878813300021168SoilQCPDYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210400_1032549223300021170SoilQCLICRGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210408_1030725513300021178SoilSAQCPDYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0193719_1020881123300021344SoilLAECPVYAGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0210389_1040541323300021404SoilLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0193694_101169823300021415SoilALCLFVPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0193695_102562113300021418SoilLCPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0210384_1037915513300021432SoilPAHDRFWGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210402_1040330723300021478SoilAARPLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210410_1037925323300021479SoilVRCPLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0210409_1033752913300021559SoilSLDGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0179589_1007729023300024288Vadose Zone SoilMALSGHARRVDDCPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGE
Ga0179589_1008595623300024288Vadose Zone SoilEGPLLGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0209977_1009734733300024432Deep SubsurfaceHLWSVGQCPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207692_1042090613300025898Corn, Switchgrass And Miscanthus RhizosphereCPVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207700_1036488413300025928Corn, Switchgrass And Miscanthus RhizosphereCPSDLNRSTQHLLILLDKEVVDGDVTDIVHGEAEG
Ga0207669_1027940823300025937Miscanthus RhizosphereRAEQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207704_1061025213300025938Miscanthus RhizosphereCRLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207712_1064088123300025961Switchgrass RhizosphereRISAARLLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207668_1074227823300025972Switchgrass RhizospherePVSAFEGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207640_1147578823300025981Corn RhizosphereCPDYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0209438_105366513300026285Grasslands SoilLARSCRVGGAYQCPKLGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0209238_106064823300026301Grasslands SoilANDGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0257162_100728323300026340SoilAEAAGACPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0257151_101319823300026341SoilLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0257149_100957213300026355SoilLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0257150_101082113300026356SoilLGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0257177_101060223300026480SoilDFDGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0257155_100897733300026481SoilYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0257164_100646423300026497SoilPNSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0208761_100709413300026995SoilPLWPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0207983_101793213300027310SoilTNRAERCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0209488_1044939223300027903Vadose Zone SoilMPGLSPQSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAK
Ga0209488_1111564223300027903Vadose Zone SoilMSAHCPVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEA
Ga0268265_1081930823300028380Switchgrass RhizosphereRPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0247818_1022728013300028589SoilPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0247822_1024361533300028592SoilLFLGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307276_1002121023300028705SoilRHFRDGDLNRSTQHLLILLDKEVADGDVTDIVHGEAKG
Ga0307293_1005069123300028711SoilPPMSVIWPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307298_1003843723300028717SoilFDLRPNRGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307315_1003805423300028721SoilSAERCPFSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307319_1003125633300028722SoilNRAERCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307318_1009922223300028744SoilMSQPLALFCRANSAERCPFSGGDLNRSTQHLLILLDKEVADGDVTDIV
Ga0307297_1002607433300028754SoilISAARLLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307280_1002797813300028768SoilMSATRPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAE
Ga0307283_1002510713300028790SoilYLAAFGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307284_1002341433300028799SoilMPRPRPLLPGDLNRSTQHLLILLDKEVADGDVTDIV
Ga0307284_1006905713300028799SoilGACPFWVGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307503_1009196023300028802SoilAEQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307302_1008916233300028814SoilSRTSAVSPLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307314_1003145713300028872SoilSAARLLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307300_1004206623300028880SoilNSDWPDLPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307308_1011097023300028884SoilFCRANRAEQCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0075405_1160378933300030847SoilVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0308202_100879213300030902SoilPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0075383_1126659513300030966SoilSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307498_1016073413300031170SoilGMSASRQLYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307495_1001260223300031199SoilRANGAERCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307495_1003164923300031199SoilMPRPRPLLPGDLNRSTQHLLILLDKEVADGDVTDIVHGEA
Ga0308186_101333123300031422SoilVYPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318538_1046592023300031546SoilRTAGPYISGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0310887_1033357423300031547SoilALFCRANRAERCPVSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318555_1012066413300031640SoilERLIASQQIGCPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0306918_1113222123300031744SoilSLCPDCLGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318529_1043773313300031792SoilFCPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318550_1061340523300031797SoilGPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318544_1029632913300031880SoilSGVPCPLYPGEFNRSVQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318506_1039951713300032052SoilISGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318513_1047060213300032065SoilCPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0318553_1015387623300032068SoilFMGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0306924_1058326123300032076SoilGCPLSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0307472_10117368723300032205Hardwood Forest SoilPDYSGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0306920_10055066313300032261SoilMSDLSPQSGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAE
Ga0306920_10079372913300032261SoilVARNGRSMRAGECLFMGGDLNRSTQHLLILLDKEVADGDVTDIVHGEA
Ga0318519_1064612013300033290SoilRNGRSMRAGECLFMGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0247829_1066799723300033550SoilPLLTGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0364935_0023014_1582_16983300034151SedimentCPLIGGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG
Ga0373950_0060881_2_1093300034818Rhizosphere SoilLPGDLNRSTQHLLILLDKEVADGDVTDIVHGEAEG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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