Metagenome / Metatranscriptome Family F070502

Basic Information
Family ID	F070502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	50 residues
Representative Sequence	RDYARKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRSS
Number of Associated Samples	106
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.642 % of family members)
Environment Ontology (ENVO)	Unclassified (29.268 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.024 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.93% β-sheet: 16.28% Coil/Unstructured: 62.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13520	AA_permease_2	91.06
PF01266	DAO	0.81
PF00069	Pkinase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.25

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.86%
Host-Associated	Host-Associated	21.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.92%
Plants	Host-Associated → Plants	21.14%
Aquatic	Environmental → Aquatic	8.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.69%
Freshwater	Environmental → Aquatic → Freshwater	4.06%
Marine	Environmental → Aquatic → Marine	4.06%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.20%
Loam	Environmental → Terrestrial → Soil → Loam	8.13%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Sand	Environmental → Terrestrial → Soil → Sand	2.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.63%
Ice	Environmental → Aquatic → Freshwater → Ice	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.63%
Pond	Environmental → Aquatic → Freshwater → Pond	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.06%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.63%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	4.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.63%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.63%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026029	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026044	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055466_101039772	3300003997	Natural And Restored Wetlands	DEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRST*
Ga0055469_101609131	3300003999	Natural And Restored Wetlands	IDDEDYARKFDEVIRSFRFTPARAPDGSRVAGTTTVTFTLPGKRSS*
Ga0066599_1014253771	3300004282	Freshwater	YEVRPAIADRDYAQKFDEVIRAFRFTPARAPDGSRIAGTTRVTFTLPGKRSS*
Ga0063356_1056041302	3300004463	Arabidopsis Thaliana Rhizosphere	VEPQIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0062595_1013147692	3300004479	Soil	RDYARKFDEVIRAFRFTPARAPDGSTVAGTTTVTFTLPGKRNS*
Ga0070689_1017140401	3300005340	Switchgrass Rhizosphere	YAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0070688_1017874221	3300005365	Switchgrass Rhizosphere	QVNPAIDDEDYARKFDEVIRAFRFTPARAPDGTRVAGTTTVTFTLPGKRSS*
Ga0070663_1008482342	3300005455	Corn Rhizosphere	AVDRYEVEPAIGDRDYAQKFDEVIRAFRFTPARAPDGTKVAGTTTVTFTLPGKRNS*
Ga0070707_1021043902	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EVDPRIVDQDYARKFDEVIRAFRFTPARAADGSRIAGTTTVTFTLPGKSKS*
Ga0070679_1004695281	3300005530	Corn Rhizosphere	VDGRVERYQVTPPIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS*
Ga0070697_1015237692	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	YARKFDEVIRAFRFTPARAPDGTKVAGTTTVTFTLPGKRSS*
Ga0070696_1018090722	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RDYARKFDEVIRAFRFTPARLPDGTKVAGTTTVTFTLPGKRIS*
Ga0075278_10069952	3300005893	Rice Paddy Soil	DEVIRSFRFTPARAPDGTTVAGTTTVTFTLPGKSSS*
Ga0070716_1000911421	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DYARKFDEVIRAFRFTPARAADGSRIAGTTTVTFTLPGKSKS*
Ga0070716_1014868992	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GVVERYTVEPEIKDRDYAKKFDEVMRAFRFTPAQAPDGTRIPGTTRISFTLPGKSSS*
Ga0079220_119877761	3300006806	Agricultural Soil	DEVMRAFRFTPAQAPDGTRIPGTTRISFTLPGKSSS*
Ga0075433_105737592	3300006852	Populus Rhizosphere	KFDEVIRAFRFTPARAPDGSTVAGTTTVTFTLPGKRNS*
Ga0079217_100867081	3300006876	Agricultural Soil	DYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS*
Ga0068865_1017408132	3300006881	Miscanthus Rhizosphere	YLVEPQIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0075424_1002883302	3300006904	Populus Rhizosphere	RKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRNS*
Ga0079219_117577092	3300006954	Agricultural Soil	ARKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRNS*
Ga0066709_1022891142	3300009137	Grasslands Soil	VDGRVERYQVDPQINDRDYARKFDEVIRAVRFTPARAPDGTRVAGTTTVTFTLPGKSSS*
Ga0114129_113940001	3300009147	Populus Rhizosphere	QVDLRIDDRDYARKFDEVIRAFRFTPARAPDGTKVAVTTRVTFTLPGKRSS*
Ga0114129_121736082	3300009147	Populus Rhizosphere	EVQPVITDRDYARKFDEVIRAFRFTPARAPDGSRIAGTTRVTFTLPGKRSS*
Ga0105249_128520031	3300009553	Switchgrass Rhizosphere	GRVERYTVEPEIKDREYAKRFDEVMRAFRFTPARAPDGTRVPGTTRISFTLPGKSSS*
Ga0105062_10693952	3300009817	Groundwater Sand	VITDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS*
Ga0126306_105968281	3300010166	Serpentine Soil	YLVEPQIKDRDYARKFDEVMRAFRFTPARAPDGTSIPGTARISFTLPGKSSS*
Ga0134127_103725461	3300010399	Terrestrial Soil	QPEIKDRDYARKFDEVMRAFRFTPARAPDGTSVAGVATISFILPGKSRS*
Ga0134121_112727131	3300010401	Terrestrial Soil	VRPDGKVERYLVEPQIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0134121_128979652	3300010401	Terrestrial Soil	EVMRAFRFTPAQAADGTRIPGTTRISFTLPGKSSS*
Ga0134123_116326291	3300010403	Terrestrial Soil	KFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRST*
Ga0137462_10700212	3300011421	Soil	FWVGADGRVERYKVMPQIKDSDYAKKFDQVMRDFSFTPARATNGARVAGTYSISFTLPGKSSS*
Ga0136632_101261092	3300012093	Polar Desert Sand	RVERHQVEPQIRDRKYARKFDEIMREFRFTPARAPNGSRVAGTITISVTLPGKSSS*
Ga0137376_115614471	3300012208	Vadose Zone Soil	RVERYQVDPEINDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTTVTFTLPGKSSS*
Ga0150985_1039629912	3300012212	Avena Fatua Rhizosphere	VDGRVERYQVNPAIDDEDYARKFDEVIRAFRFTPARAPDGTRVAGTTTVTFTLPGKRSS*
Ga0137367_110506752	3300012353	Vadose Zone Soil	ERYQVDPQINDRDYARKFDEVIRAFRFTPARAPDGTRVAGTTTVTFTLPGKSSS*
Ga0137361_105066281	3300012362	Vadose Zone Soil	HDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRNS*
Ga0150984_1085042752	3300012469	Avena Fatua Rhizosphere	MDGQVERYQVNPAIDDEDYARKFDEVIRAFRFTPARAPDGSHVAGTTTVTFTLPGKRST*
Ga0157285_102309921	3300012897	Soil	ARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS*
Ga0157285_103851181	3300012897	Soil	TKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0157302_104093482	3300012915	Soil	VDGRVERYQVNPAIDDEDYAGKLDEVIRSFRFTRARARDGTRVAGTTTVTFTLPGKLSS*
Ga0164300_105485671	3300012951	Soil	RYEVAPEIADRDYARKFDEVIRAFRFTPARAPDGSSVAGTTTVTFTLPGKRNS*
Ga0164299_107616861	3300012958	Soil	EVDPAIADDDYARKFDEVIRAFRFTPARTPDGRTVAGTTTVTFTLPGKRSS*
Ga0164299_108304171	3300012958	Soil	DYARKFDEVIRSFRFTPARAPDGTRVAGTTTVTFTLPGKLSS*
Ga0164302_114396862	3300012961	Soil	YTVEPEIKDREYAKKFDEVMRAFRFTPARAPDGTRVPGTARISFTLPGKNSS*
Ga0164304_112088562	3300012986	Soil	RYEVAPEIADRDYARKFDEVIRAFRFTPARAPDGSTVAGTTTVTFTLPGKRNS*
Ga0164305_106366742	3300012989	Soil	EVMRAFRFTPAQAPDGTRIPGTTRISFTLPGKSSS*
Ga0164305_112787261	3300012989	Soil	KFDEVIRSFRFTPARAPDGTRVAGTTTVTFTLPGKLSS*
Ga0157371_112843262	3300013102	Corn Rhizosphere	EDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS*
Ga0163162_128388031	3300013306	Switchgrass Rhizosphere	DYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS*
Ga0167657_10159781	3300015079	Glacier Forefield Soil	EIKDRDYARKFDEVMRAFRFTPARAPDGTSVAGVAKISFILPGKSSS*
Ga0120098_10617541	3300015170	Fossill	DVQPAINDRDYARKFDEVIRAFRFTPARAPDGTKVAGTTRVTFTLPGKRSS*
Ga0132255_1000496321	3300015374	Arabidopsis Rhizosphere	KFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS*
Ga0136617_103364672	3300017789	Polar Desert Sand	FDEIMRAFRFTPARATNGASVADTITISVTLPGKSNS
Ga0190265_122442792	3300018422	Soil	DGRVERYEVRPVITNEDYARKFDEVIRAFRFTPARAPDGSRIAGTTRVTFTLPGKRSS
Ga0190272_131812592	3300018429	Soil	YEVEPEIKDRDYAKKFDEVMRAFRFTPARAPDGTSVAGVARISFTLPGKSSS
Ga0066655_111992152	3300018431	Grasslands Soil	DEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRNS
Ga0190275_133596601	3300018432	Soil	KFDEVMRAFRFTPARAPDGSSVAGEATISFVLPGKSSS
Ga0190268_104947652	3300018466	Soil	DYARKFDEVIRAFRFTPARTPDGTRVAGTTTVTFTLPGKRSS
Ga0190270_100896533	3300018469	Soil	TFWVRVDGRVDRYEVRPAISDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0190264_114225172	3300019377	Soil	LRGASLDVVFWVRVDGRVERYEVQPVITDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0193733_11252802	3300020022	Soil	DYAKKFDEVMRAFRFTPARAPDGTWVAGTTKISFTLPGKSSS
Ga0196964_102803781	3300020202	Soil	RDYAKKFDEVMRAFRFTPAQAADGTRIPGTTRISFTLPGKSSS
Ga0210381_102196481	3300021078	Groundwater Sediment	PEIRDRDYAKKFDEVMRAFRFTPARAPDGSQVAGTTKISFTLPGKSSS
Ga0210382_101519631	3300021080	Groundwater Sediment	GRVERYRVEPEIKDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKSSS
Ga0196959_101451011	3300021184	Soil	FWVRVDGRVERYEVRPAIDDREYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0193695_10429481	3300021418	Soil	RVERYQVVPEIKDRDYAKKFDEVMRAFRFTPARAPDGTWVAGTTKISFTLPGKSSS
Ga0182009_102779561	3300021445	Soil	VRVDGRVDRYEVAPEIADRDYARKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRN
Ga0209642_105498462	3300025167	Soil	KFDEVMRAFRFTPARAPDGSSVAGVATISFILPGKSSS
Ga0210115_10127422	3300025791	Natural And Restored Wetlands	RVERYEVRPAINDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0210113_10978202	3300025796	Natural And Restored Wetlands	GRVERYQVTPPIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRST
Ga0207643_108777491	3300025908	Miscanthus Rhizosphere	VDGRVERYQVTPPIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRST
Ga0207709_112400112	3300025935	Miscanthus Rhizosphere	NPAIDDEDYARKFDEVIRSFRFTPARAPDGTRVAGTTTVTFTLPGKLSS
Ga0207665_101075361	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DYARKFDEVIRAFRFTPARAADGSRIAGTTTVTFTLPGKSKS
Ga0207679_117827872	3300025945	Corn Rhizosphere	DYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS
Ga0210102_10327011	3300025971	Natural And Restored Wetlands	VDGKVERYQVDPAIADRDYARKFDEVIRAFRFSPARASDGSRVAGTTTVTFTLPGKRSS
Ga0208002_10070452	3300026029	Natural And Restored Wetlands	ARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0208287_10178251	3300026044	Natural And Restored Wetlands	WVRVDGRVERYEVRPAINDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0209074_102806711	3300027787	Agricultural Soil	FWVRVDGRVDRYEVAPEIADRDYARKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRNS
Ga0209074_104215431	3300027787	Agricultural Soil	RVDRYEVAPEIADHDYARKFDEVIRAFRFTPARAPDGRTVAGTTTVTFTLPGKRNS
Ga0209590_108081741	3300027882	Vadose Zone Soil	QIDPEIHDRDYARKFDEVIRAFRFTPARAPDGTRVAGTTTVTFTLPGKSSS
Ga0268265_115309012	3300028380	Switchgrass Rhizosphere	RYQVTPPIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS
Ga0272482_100171932	3300028578	Soil	RYQVRPEIKDRDYAKKFDEVMRAFRFTPARTPNGTRVAGTTSISFTLPGKSSS
Ga0247828_109984162	3300028587	Soil	RVERYLVEPQIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS
Ga0307313_100334062	3300028715	Soil	WVRVDGRVERYQVVPEIKDRDYAKKFDEVMRAFRFTPARAPDGTWVAGTTKISFTLPGKSSS
Ga0307313_101967552	3300028715	Soil	VVPEIKDRDYAKKFDEVMRAFRFTPARAADGTWVAGTTKISFTLPGKSSS
Ga0307307_101227141	3300028718	Soil	AIKDRDYAKKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKSSS
Ga0307280_102754271	3300028768	Soil	RYRVEPEIKDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKSSS
Ga0307290_100708872	3300028791	Soil	WVRMDGRVERYEVVPEIKDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKS
Ga0307284_102706382	3300028799	Soil	VIPEIKDRDYAKKFDEVMRAFRFTPARAPDGTWVAGTTKISFTLPGKSSS
Ga0307305_105055021	3300028807	Soil	DEVMRAFRFTPARTPDGKRVAGTTRISFTLPGKSSS
Ga0307310_101057601	3300028824	Soil	FDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKSNS
Ga0307310_101475201	3300028824	Soil	FWVRVDGRVERYQVDPEINDRDYARKFDEVMRAFRFTPARAPDGTRVSGTTTVTFTLPGKSSS
Ga0307310_102547111	3300028824	Soil	VPEIKDRDYARKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKSSS
Ga0307312_102448572	3300028828	Soil	VRVDGRVERYEVEPAIKDRDYAKKFDEVMRAFRFTPARAPDGTRVAGTTKISFTLPGKSS
Ga0307304_105883601	3300028885	Soil	RDYARKFDEVIRAFRFTPARAPDGTTVAGTTTVTFTLPGKRSS
Ga0247827_104538432	3300028889	Soil	VRVDGRVERYEVRPAISDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRS
Ga0247827_106846141	3300028889	Soil	ARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS
Ga0299907_107197092	3300030006	Soil	TDRNYARKFDEVIRAFRFRPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0299906_110969362	3300030606	Soil	PRIKDRDYARKFDEVMRSFRFTPARSPDGRRVAGVTSISFTLPGKRSS
Ga0299914_113615061	3300031228	Soil	VFWVRVDGRVERYEVQPVITDRDYARKFDEVIRAFRFTPARAPDGSRIAGTTRVTFTLPGKRSS
Ga0299913_111577092	3300031229	Soil	RKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0308194_101515621	3300031421	Soil	RVDGRVERYQVVPEIKDRDYAKKFDEVMRAFRFTPARAPDGTWVAGTTKISFTLPGKSSS
Ga0310886_106564712	3300031562	Soil	GRVERYEVRPAISDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0310886_107317272	3300031562	Soil	EDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS
Ga0307413_101230561	3300031824	Rhizosphere	TFWVRVDGGVERYEVDPAIGDRDYARKFDEVIRAFRFTPARAPDGTKVAGTTTVTFTLPGKRHS
Ga0310907_102599291	3300031847	Soil	ERYQVNPAIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTATVTFTLPGKRSS
Ga0310892_101526321	3300031858	Soil	KFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS
Ga0310891_101449241	3300031913	Soil	YLVEPQIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS
Ga0310885_101922672	3300031943	Soil	PIDDEDYARKFDEVIRAFRFTPARAPDGSRVAGTTTVTFTLPGKRSS
Ga0214473_114455451	3300031949	Soil	DPAIGDRDYARKFDEVIRAFRFGPARAPDGTRVAGTTTVIFTLPGKRSS
Ga0307409_1001778841	3300031995	Rhizosphere	RYEVDPAIGDRDYARKFDEVIRAFRFTPARAPDGTKVAGTTTVTFTLPGKRHS
Ga0307409_1003240412	3300031995	Rhizosphere	FWVRVDGQVDRYEVDPSIDDREYARKFDEVIRAFRFTPARAPDGRRVAGTTTVTFTLPGKRDS
Ga0307409_1008421321	3300031995	Rhizosphere	KKFDEVMRAFRFTPARAPDGTSIPGTARISFTLPGKSSS
Ga0307409_1012827612	3300031995	Rhizosphere	EIKDRDYARKFDEVMRAFRFTPARAPDGTTVAGTTKISFTLPGKSSS
Ga0307411_101156261	3300032005	Rhizosphere	YARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0310890_101316272	3300032075	Soil	QIKDRDYAKKFDEVMRAFRFTPARAPDGTFIPGTARISFTLPGKSSS
Ga0310890_106369402	3300032075	Soil	ERYEVRPAISDRDYARKFDEVIRAFRFTPARAPDGTRIAGTTRVTFTLPGKRSS
Ga0307415_1009077571	3300032126	Rhizosphere	WVRNDGRVERYVVEPAIRDRDYAKKFDEVMRAFRFTPAQAADGTRIPGTTRISFTLPGKSSS
Ga0307415_1016652151	3300032126	Rhizosphere	EVEPAIGDRDYARKFDEVIRAFRFTPARAPDGRRVAGTTTVTFTLPGKRDS
Ga0214472_109445892	3300033407	Soil	DPELTDRDYARKFDEVIRAFRFTPARAPDGTRVAGTTTVTFTLPGKART
Ga0310810_114719641	3300033412	Soil	PEIADRDYARKFDEVIRAFRFTPARAPDGSTVAGTTTVTFTLPGKRHS
Ga0373959_0137351_486_608	3300034820	Rhizosphere Soil	ARKFDEVIRAFRFTPARAPDGSTVAGTTTVTFTLPGKRNS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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