Metagenome Family F070389

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F070389
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	100 residues
Representative Sequence	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYSYPADGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGAR
Number of Associated Samples	103
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.78 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	96.75 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.374 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.016 % of family members)
Environment Ontology (ENVO)	Unclassified (28.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.033 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.48% β-sheet: 29.51% Coil/Unstructured: 59.02%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF05922	Inhibitor_I9	1.63
PF00082	Peptidase_S8	1.63
PF05711	TylF	0.81
PF03861	ANTAR	0.81
PF02300	Fumarate_red_C	0.81
PF03640	Lipoprotein_15	0.81
PF06803	DUF1232	0.81
PF13578	Methyltransf_24	0.81
PF01345	DUF11	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG3029	Fumarate reductase subunit C	Energy production and conversion [C]	0.81
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.81
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.81
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.37 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.12 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.12 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	89.43 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.44 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	88.62 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	2.44 %
Unclassified	root	N/A	1.63 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.62 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	2.44 %
Unclassified	root	N/A	1.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119546975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300004479\|Ga0062595_101549542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300005093\|Ga0062594_100986972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300005093\|Ga0062594_102407590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005180\|Ga0066685_10669731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300005187\|Ga0066675_10706168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300005187\|Ga0066675_11460439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005330\|Ga0070690_101650815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005340\|Ga0070689_102095617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005355\|Ga0070671_102038289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005440\|Ga0070705_101355898	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005440\|Ga0070705_101722106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300005467\|Ga0070706_100398415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1281	Open in IMG/M
3300005471\|Ga0070698_101216759	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300005558\|Ga0066698_11111819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005560\|Ga0066670_10260260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1052	Open in IMG/M
3300005568\|Ga0066703_10897470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300006032\|Ga0066696_10214440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1233	Open in IMG/M
3300006034\|Ga0066656_10415430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300006034\|Ga0066656_10860352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300006175\|Ga0070712_100875041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300006791\|Ga0066653_10288839	Not Available	829	Open in IMG/M
3300006871\|Ga0075434_102326529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300006954\|Ga0079219_10827802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300009012\|Ga0066710_101713713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300009012\|Ga0066710_104377017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300009088\|Ga0099830_11631139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300009090\|Ga0099827_10225148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1568	Open in IMG/M
3300009090\|Ga0099827_11565832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300009094\|Ga0111539_11104925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300009137\|Ga0066709_100028373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5863	Open in IMG/M
3300009137\|Ga0066709_104625130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300009147\|Ga0114129_10572674	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300009176\|Ga0105242_10581876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300009177\|Ga0105248_13340433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300009792\|Ga0126374_10658212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300009801\|Ga0105056_1070116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300009818\|Ga0105072_1061081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	725	Open in IMG/M
3300010038\|Ga0126315_10767369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300010039\|Ga0126309_10914469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300010043\|Ga0126380_11840612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300010046\|Ga0126384_12230954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300010322\|Ga0134084_10227501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300010333\|Ga0134080_10626774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300010371\|Ga0134125_11681889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300010399\|Ga0134127_10888223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300010401\|Ga0134121_12229105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300011119\|Ga0105246_12317602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300012010\|Ga0120118_1173200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300012011\|Ga0120152_1181293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012096\|Ga0137389_11640838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012202\|Ga0137363_11598850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300012204\|Ga0137374_10394625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1102	Open in IMG/M
3300012204\|Ga0137374_10781667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300012205\|Ga0137362_11229630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012206\|Ga0137380_10977255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300012206\|Ga0137380_11014059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300012207\|Ga0137381_10137692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2094	Open in IMG/M
3300012207\|Ga0137381_11166041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300012350\|Ga0137372_11117422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012351\|Ga0137386_10914850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300012355\|Ga0137369_11042740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012356\|Ga0137371_10075140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2620	Open in IMG/M
3300012359\|Ga0137385_10558945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300012685\|Ga0137397_10947374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300012951\|Ga0164300_10662303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300012985\|Ga0164308_10965374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300012986\|Ga0164304_10929415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300013764\|Ga0120111_1156071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300014058\|Ga0120149_1057180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300014745\|Ga0157377_10262326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300014969\|Ga0157376_11949649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300015241\|Ga0137418_10719655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300015245\|Ga0137409_11609734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300015372\|Ga0132256_102858329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300015374\|Ga0132255_103472399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300018000\|Ga0184604_10382816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018028\|Ga0184608_10407106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300018032\|Ga0187788_10407558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300018053\|Ga0184626_10130982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300018076\|Ga0184609_10353031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300018431\|Ga0066655_10626377	Not Available	726	Open in IMG/M
3300018482\|Ga0066669_10574283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300019875\|Ga0193701_1101801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300020002\|Ga0193730_1036214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1430	Open in IMG/M
3300021080\|Ga0210382_10476137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300021344\|Ga0193719_10467606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300022756\|Ga0222622_10211324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1294	Open in IMG/M
3300025910\|Ga0207684_10068134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3025	Open in IMG/M
3300025910\|Ga0207684_10357141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300025915\|Ga0207693_11367297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300025927\|Ga0207687_10135559	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300026538\|Ga0209056_10697901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300027379\|Ga0209842_1011007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1786	Open in IMG/M
3300027862\|Ga0209701_10492810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300027882\|Ga0209590_10415300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300027882\|Ga0209590_10878925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028710\|Ga0307322_10130517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300028714\|Ga0307309_10142516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300028715\|Ga0307313_10249828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028716\|Ga0307311_10086985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300028716\|Ga0307311_10121490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300028718\|Ga0307307_10194168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300028718\|Ga0307307_10217423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300028718\|Ga0307307_10293187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300028784\|Ga0307282_10117843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300028787\|Ga0307323_10061707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300028796\|Ga0307287_10147472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300028799\|Ga0307284_10391283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028811\|Ga0307292_10253947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300028814\|Ga0307302_10074715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1601	Open in IMG/M
3300028814\|Ga0307302_10341928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300028824\|Ga0307310_10226467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300028824\|Ga0307310_10233130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300028828\|Ga0307312_10859026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300028878\|Ga0307278_10210341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300028881\|Ga0307277_10140342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300028881\|Ga0307277_10157790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300028881\|Ga0307277_10482600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300028884\|Ga0307308_10077773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1571	Open in IMG/M
3300028884\|Ga0307308_10334606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300031198\|Ga0307500_10131327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300033475\|Ga0310811_10431851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1421	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.24%
Host-Associated	Host-Associated	9.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.37%
Plants	Host-Associated → Plants	9.76%
Aquatic	Environmental → Aquatic	4.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.94%
Sediment	Environmental → Aquatic → Sediment	4.06%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.17%
Loam	Environmental → Terrestrial → Soil → Loam	8.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.06%
Sand	Environmental → Terrestrial → Soil → Sand	2.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.25%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1195469752	3300002568	Soil	VALFLVFAAPARAGTLGLAEVRGSDGALIGRAASGAYAYPSDGSVLRIGSSRATAARVELKDVSMFNGRVTVDRLVVPARGLKGARI
Ga0062595_1015495421	3300004479	Soil	MAVILLAVATPAQAGTLGLAEVRSPDGTLLGKAGSGAFAYPADGSVLRIGSAHATAARVELRNVSMFNGRVTVRRLVVPARGLAGARVDGLVVDGTGYV
Ga0062594_1009869723	3300005093	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSTLRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGARIEGLVVDGTSYVVGANAIIPLDGGSYIVALQEAVSPGRT
Ga0062594_1024075901	3300005093	Soil	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAYAYPADGSVLRIGWSRATAARVELRNVSMFNGRVTVKRLVVPARGLAGARVDGLVVDGTGYV
Ga0066685_106697312	3300005180	Soil	MLRRAAGVAALLLVFAAPARAGTLGLAEVRAPDGTLLGKANAGVFAYPADGSVLRIGSSRATSARVELRDVSMFNGRITVRRLLVPARGLTGARIDGLVVDGTDYVVGP
Ga0066675_107061681	3300005187	Soil	MLRRAAAAGFVFLFFAAPARAGTLGLAEVRSSDGTLIGKAGAGAYAYPADGSILRIGFSRANAARVELRDVSMFNGRITVRRLVVPARGLAGARVEGLVVDGKSYVVGPNAIIPLAGGSYLVALQEAVSPGRTGS
Ga0066675_114604391	3300005187	Soil	MRRGAGVVLVLLVFAAPGGAGTLGRVEVRAADGTLIGMAGAGAYAYPADGSILRIGSSRVSAGRVELRDVTMFNGRVTVRRLVVPARGLHGARIDGLVVDGTGYIVGPNAIIPLQGGSYLVALQ
Ga0070690_1016508151	3300005330	Switchgrass Rhizosphere	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSTLRIGSSRANAARVELRDVSMFNGRVTVR
Ga0070689_1020956171	3300005340	Switchgrass Rhizosphere	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAYAYPADGSVLRIGWSRATAARVEL
Ga0070671_1020382891	3300005355	Switchgrass Rhizosphere	MVRRAAVVGALSFLLATPAHAGSLGLAEVRGSDGAMLAKAGTGPYAYPADGSVLRIGSSRPTASRVELRDVSMFNGRVT
Ga0070705_1013558982	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MARRVAGLAALLLVLVGPARAGTLGLAEVRASDGSLIGKADGGAFAYPADGSVLRIGSSHVTTARVVLRNVSMFNGRVTVRRLVVPARGL
Ga0070705_1017221061	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLRRGLGVAAILLVFAAPVRAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLV
Ga0070706_1003984151	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLRRGLWLAAILLVFAAPARAGTVGLAEVRGADGTLIGKAGVGAYAYPADGSVLRIGSSRVTAARVELRNVSMF
Ga0070698_1012167591	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARRVAGLAALLLVLVGPARAGTLGLAEVRASDGSLIGKADGGAFAYPADGSVLRIGSSHVTAARVVLRNVSMFNGRVTVRRLVVPARGLAGARVDGLVVDGT
Ga0066698_111118192	3300005558	Soil	MLRRGLGVAAVLFVFASPARAGTLGLAEVRSSDGTLLGKAGVGAYAYPVDGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGARIEGLVVDGTGYVVGPNAIIPLDGGSYIVALQEAVSPGR
Ga0066670_102602601	3300005560	Soil	MLRRAAGVAALLLVFAAPARAGTLGLAEVRAPDGTLLGKANAGVFAYPADGSVLRIGSSRATSARVELRDVSMFNGRI
Ga0066703_108974701	3300005568	Soil	MLRRGAAVAFVFLVFAAPARAGTLGLAEVRSSDGTLIGKAVAGAYAYPADGSILRIGSSRANAARVELRNVSMFDGRVTVRRLVVPARGLAGARIEGLVVDGKSYVVGPNAIIPLAGGSYLVALQEAVSPGRTGSG
Ga0066696_102144402	3300006032	Soil	MLRRAAGVAALLLVFAAPARAGTLGLAEVRAPDGTLLGKANAGVFAYPADGSVLRIGSSRATSARVELR
Ga0066656_104154301	3300006034	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLLGKAGVGAYAYPVDGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVASRGLGGARIEGLVVDGTGYVVGPN
Ga0066656_108603522	3300006034	Soil	MLRRAAGVAALLLVFVAPARAATLGPAEVEAPDGTLLGKATRGAYSYPADGSVLRIGSSRITAARLVLRSVSMFNGRITVRRIVVPARGLAGGRVDGLVVDGTGYVVGPNALISLGGG
Ga0070712_1008750411	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAYAYPADGSVLRIGWSRATGARVELRNVSMFNGRVTVKRLVVPARGLAGARVDGLVVDGTGYIVGPNALISLGGGSYIVALQEAV
Ga0066653_102888391	3300006791	Soil	MLRRAAAVVFVFFVFAAPASAGSLGLAEVRASDGTLIGKAQAGAYAYPSDGSVLRIGSSRVNTARVELRDVA
Ga0075434_1023265291	3300006871	Populus Rhizosphere	MVRRAAGVAALFLVFAAPAQAGSLGLAEVRGTDGALIGKATGGSYAYPADGSVLRIGWSRATAAKVELRNVSMFNGR
Ga0079219_108278022	3300006954	Agricultural Soil	MVRRAAGVAALFLVFAAPARAGTLGLAEVRGTDGTLIGKAGAGTYAYPADGSVLRIGWSRATAAKVELRDISMFNGRVTVKRLVVPARGLQGARVDGLAVDGTGYVVGPNALI
Ga0066710_1017137133	3300009012	Grasslands Soil	MLRRGSGVAAVLFLLAAPAQGGTLGLAEVRSADGTLIGKAGAGTYTYPADGSVLRIGSARATAARVELRNVTMFNGRVTVRRLVVPARGLDGARVEGPVVDGIGYVVGPNSPIPLDGGSYLGALQEAVS
Ga0066710_1043770171	3300009012	Grasslands Soil	MLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGRAGAGAYSYPADGSILRIGSSRATAAHVELRNVSMFNGRITVRRLVVPSRGLRGARIDGLVVDGTGYVVGPN
Ga0099830_116311391	3300009088	Vadose Zone Soil	MLRRGLWLAAVLLVFAAPARAGTVGLAEVRGADGTLIGKAGVGTYSYPADGSILRIGASRATAARVELRNVSMFNGRITVRR
Ga0099827_102251481	3300009090	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGGTLGLAEVRSSDGTLIGKAGAGAYSYPADGSILRIGSSRATAARVVLRNVSMFNGRVTV
Ga0099827_115658322	3300009090	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGTLGLAEVRSADGTLLGRAGAGAYSYPADGSILRIGWSRVTSARFELRNVSMFNGRITVRRLVVPSRGLAGARIDGLVVDG
Ga0111539_111049252	3300009094	Populus Rhizosphere	MVFLALAPAAHGGTLGLAEVRASDGTLLAKAGAGAFDYPADGSVLRVGSADVNAARVELRDVTMFNGRVTIQRVVVPSRGLNGAHIDGLVVDGTGYVVGPNALIPLGGGSYLVALQEAVSPGRTGS
Ga0066709_1000283731	3300009137	Grasslands Soil	MLRRGLGLAAILLVFAAPARAGTLGLAEVRAADGTLLGKAGAGAYSYPADGSILRIGWSRVTAARVELRNVSMFNGRITVRRLVVPSRGLAGARIAGLVVDGTSFVVGPNAIIPLD
Ga0066709_1046251301	3300009137	Grasslands Soil	MLRRTVGVAVVLLIFAAPAHAGSLGPAEVRSPDGTLIGKAGAGAYAYPADGSVLRIGSSRVTAARVELRNVTMFNGRVSVRRLVVPARGLTGARVDGLVVDG
Ga0114129_105726743	3300009147	Populus Rhizosphere	MVRRAAGVAALFLVFAAPAQAGSLGLAEVRGTDGALIGKATGGSYAYPADGSVLRIGWSRATAAKVELRNISMFNGRVTVKRLVVPA
Ga0105242_105818764	3300009176	Miscanthus Rhizosphere	MLRRGFGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSTLRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGARIEGLVVDGTS
Ga0105248_133404331	3300009177	Switchgrass Rhizosphere	LTRLMVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGQAPGGAYAYPADGSVLRIGWSRATAARVELRNVSMFNGRVMVKRLVVPARGLAGARVDGLVVDGTAFYDSIAFDDLWNRVSP*
Ga0126374_106582122	3300009792	Tropical Forest Soil	MARRAAGVVALFLVLAAPARAGTLGLAEVRGTDGTLIGKAAGGAYAYPADGSVLRIGWSRATAARVELRDISMFNGRVTVKRLVVPARG
Ga0105056_10701162	3300009801	Groundwater Sand	MLRRGVGVAIVFLALAAPAHAGTLGLAEVRSSDGTLIGRAGAGAYSYPADGSVLRIGSARATAASVELRDVTMFNGRVTVRRLVEPSRGLGGARVEGLVVDGTGYVVGPNAL
Ga0105072_10610811	3300009818	Groundwater Sand	MLRRGVGVAIVFLALAAPARAGTLGLAEVRSSDGTLIGRAGAGAYSYPADGSVLRIGSARATAASVELRDVTMFNGRVTVRRLVVPSRGLGGARVEGLVVDGTGYVV
Ga0126315_107673691	3300010038	Serpentine Soil	MLRRLAGVAVVFLALAPTARGGTLGLAEVRSPDGTLVAKAGAGAYGYPADGSVLRIGSALVNAARVELRDVTMFNGRVTIRRLVVP
Ga0126309_109144691	3300010039	Serpentine Soil	MFVLLAFAAPAHAGTLGLAEVRASDGTLIGKAGAGAYAYPADGSVLRIGSARSNAARVELRNVTMFNGRITVRRLVVPARGLGGARVEGLVVDGTGYVVGP
Ga0126380_118406121	3300010043	Tropical Forest Soil	MARRAAGVVALFLVLAAPARAGTLGLAEVRGTDGTLIGKAAGGAYAYPADGSVLRIGWSRATAARVELRDVSMFNGRVTVERLVVPARGLQGARVDGLVVDGTG
Ga0126384_122309542	3300010046	Tropical Forest Soil	MVRRAAGVVALFLVLAAPARAGTLGLAEVRGTDGTLIGKAGGGAYAYPADGSVLRIGWSRATAARVELRDISMFNGRITVRRLVVPARGLQGARVEGLVVDGTGYVVGPNALISLG
Ga0134084_102275011	3300010322	Grasslands Soil	MLRRAAAVVFVFFVFAAPASAGSLGLAEVRASDGTLIGKAQAGAYAYPSDGSVLRIGSSRVNAARVELRDVAMFSGRVTVD
Ga0134080_106267742	3300010333	Grasslands Soil	MDCSLAPTTPVWSFFSFASNIRASMLRRGLGVAAILLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRR
Ga0134125_116818893	3300010371	Terrestrial Soil	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAYAYPADGSVLRIGWSRATGARVELRNVSMFNGRV
Ga0134127_108882231	3300010399	Terrestrial Soil	MVRRAAGVAALLFLLVAPAHAATLGLAEVRGSDGALIGEADSGSYAYPADGSVLRIGWSRATAAKVELRDVSMFNGRVTVKRLVVPARGLKGARVE
Ga0134121_122291051	3300010401	Terrestrial Soil	MVRRAAVVGALFFLLATPAHAGSLGLAEVRGSDGAMLAKAGTGAYAYPADGSVLRIGSSRATASRVELRDVSMFNGRVTV
Ga0105246_123176022	3300011119	Miscanthus Rhizosphere	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSILRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGARIEGLVVDGTSYVVGANAI
Ga0120118_11732001	3300012010	Permafrost	MLRRGLGLAAILLVFAAPAQAGGTLGLAEVRSSDGTLIGRAGAGAYSYPADGSILRIGSSRSTAARVELRNVSMFNGRVTVRRLVVPARGLQGARIDGLVVDGTS
Ga0120152_11812931	3300012011	Permafrost	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLIGKAGAGDYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVHRLVVPSRGLG
Ga0137389_116408382	3300012096	Vadose Zone Soil	MLRRGLWLAAVLLVFAAPARAGTVGLAEVRGADGTLIGKAGVGTYSYPADGSILRIGSSRVTAARVELRNVSMFNGRITVRRLVVPSRGLAGARIDGLVVDGTGFVVGPNAIIPLDGGSYVVALQEAVSPGR
Ga0137363_115988502	3300012202	Vadose Zone Soil	MLRRGLGLAAILLFFAAPARAGTVGLAEVRGADGTLIGKAGVGAYAYPADGSILRIGSSRVTAARVELRNVSMFNGRITVRR
Ga0137374_103946253	3300012204	Vadose Zone Soil	MLRRAAGVAFVLLCFAAPARAGTLGLAEVRSADGTLIGRADAGAYGFPADGSVLRIGSSRATAARVELRNVSMFNGRVTVRRIIVPARGLKGARLDGLVVDGTGYVVGANAIISLDGGSYLVALQEAVSPG
Ga0137374_107816672	3300012204	Vadose Zone Soil	MVLRAVGVAALLLVFAVPARAGTLGLAEVRGSDGTLIGKAGGGAYAYPADGSVLRIGWARATAARVELRDVSMFNGRLTVGRLVVPARGLTGARVDGLVVDGTGYVVG
Ga0137362_112296302	3300012205	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGWSRVTAARVELRNVSMFNGRITVRRLVVPSRGLAGARIAGLVVDGTSFVVGPN
Ga0137380_109772551	3300012206	Vadose Zone Soil	VLVLLVFAAPARAGTLGLAEVRSADGTLIGKAGGGAYAYPADGSILRIGSSRVSAGRVELRDVTMFNG
Ga0137380_110140591	3300012206	Vadose Zone Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGRLIGKAGAGAYAYPADGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGARIEGLVVDGTGY
Ga0137381_101376921	3300012207	Vadose Zone Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLLGKAGVAAYAYPADGSILRIGSSRATAARVELSDVSMFNGRITVRRLVVPSRGLGGARIEGLVVDGTVYVVGPNAIIPLDGGSYIVALQEAVSPG
Ga0137381_111660411	3300012207	Vadose Zone Soil	MLRRGLGVAAILLVFVAPARAAGTLGLAEVRSADGTLIGQAGAGAYSYPADGSILRISWSRATAARVELRNVSMFNGRVYVSRIVVPARALAGASVDGLIADGKAYVVGPNALIHLQGGSYLVALQEA
Ga0137372_111174222	3300012350	Vadose Zone Soil	MLRHGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLLGKAGVGAYAYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVVPSRGLAGARIDGLVVD
Ga0137386_109148501	3300012351	Vadose Zone Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLLGKAGVAAYAYPADGSILRIGSSRATAARVELRDVS
Ga0137369_110427401	3300012355	Vadose Zone Soil	MLRRGVGVAIVLLVFAAPARAGTLGLAEVRSADGTLVGKAGAGVYKYPADGSVLRIGSARANAAKVELRNVTMFNGRVTVRRLVVP
Ga0137371_100751401	3300012356	Vadose Zone Soil	MLAAPARAATLGLAEVRGSDGTLIGRAGAGAYAYPTDGSVIRIGWARATAARVELRNVSMFNGRVTVKRLVVPARGLKGARVDGLVVDGTGYIVGPNALISLGGGSYVVALQEAVSPGRAGSGL
Ga0137385_105589452	3300012359	Vadose Zone Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLLGKAGVGAYAYPADGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGARIE
Ga0137397_109473741	3300012685	Vadose Zone Soil	MLRRGLGVAAVLLVFAAPARAGTLGLAEVRSADGTLLGKAGTGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVVPS
Ga0164300_106623031	3300012951	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSIFNGRITVRRLVVPSRGLGGARIDGLVVDGTSYVVGPNAIIPL
Ga0164308_109653741	3300012985	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSILRIGSSHANAARVELRDVSMFNGRVTVRRLVVPSRGLGGAKIEGLVVDGTGYVVGANAIIPLDGGSY
Ga0164304_109294152	3300012986	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNG
Ga0120111_11560711	3300013764	Permafrost	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYSYPADGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGAR
Ga0120149_10571801	3300014058	Permafrost	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYSYPADGSILRIGSSRATAARVELRDVSMFNGRITVRRLVVPSRGLGGARIEGLVVDGTGYVVGPNAIIPLDGGSYIVALQEAVSPGRTG
Ga0157377_102623264	3300014745	Miscanthus Rhizosphere	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSILRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGARIEGLVVDGTSYVVGANAII
Ga0157376_119496492	3300014969	Miscanthus Rhizosphere	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSTLRIGSSRANAARVELRDVSMFNGRV
Ga0137418_107196552	3300015241	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGWSRVTAARVELRH*
Ga0137409_116097342	3300015245	Vadose Zone Soil	MLRRGLGVAAALLVFASPARAGTLGLAEVRSSDGTLIGKAGAGAYAYPADGSILRIGSSRATAARVELRNVS
Ga0132256_1028583291	3300015372	Arabidopsis Rhizosphere	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAYAYPADGSVLRIGWSRATAARVELRNVSMFNGRVMVKRLIVPARGLAGA
Ga0132255_1034723991	3300015374	Arabidopsis Rhizosphere	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGSLLGKAPGGAFAYPADGSVLRIGWSRATAARVELRNISMFNGRVTVKRLVVPARGLAGARVDGLVVDGTGYVVGPNALISLGGGSYIVALQEAVS
Ga0184604_103828161	3300018000	Groundwater Sediment	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELHDVSIFNGRITVRRLVVPSRGLGGARIDGL
Ga0184608_104071062	3300018028	Groundwater Sediment	MLRRGLGMAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFN
Ga0187788_104075582	3300018032	Tropical Peatland	MVRRAAGVAALFLVFAAPAHAGSLGLAEVRGSDGALIGKAGEGAYAYPADGSVLRIGWSRATAARVELRNVSMFNGRVTVQ
Ga0184626_101309821	3300018053	Groundwater Sediment	VVFVLLAFAAPAHAGTLGLAEVRSPDGTLIGKAGTGAYFYPADGSVLRVGSARSTAASVELRDVSMFNGRVTVRRLVVPARGLGGARVEGLVVDGTGYVVGPNSLIPLN
Ga0184609_103530313	3300018076	Groundwater Sediment	MLRRGLGVAAILLVFAAPARAGTLGLAEVRAADGTLIGKAGVGAYSYPADGSILRIGSSRVTAARVELR
Ga0066655_106263771	3300018431	Grasslands Soil	MLRRAAGVAALLLVFVAPARAATLGPAELEAPDGTLLGKATRRAYSYPADGSVLRIGSSRLTAARLVLRSVSMFNRRITARRIVVPARRRARGLVARLV
Ga0066669_105742831	3300018482	Grasslands Soil	MLRRAAAVVFVFFVFAAPASAGSLGLAEVRASDGTLIGKAQAGAYAYPSDGSVLRIGSSRVNAARVELRDVAMFSGRVTV
Ga0193701_11018011	3300019875	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITV
Ga0193730_10362144	3300020002	Soil	MLRRGLGVAAVLLVFAAPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVDLRDVSMFNGRITVSRLVVPSRGLGGARIDGLVVDGTGYVVGPN
Ga0210382_104761371	3300021080	Groundwater Sediment	MLRRGLGMAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLM
Ga0193719_104676061	3300021344	Soil	MAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSTLRIGSSRADAARVELRDVSMFNGRITVRRLVVPSRGLGSARIDGLV
Ga0222622_102113241	3300022756	Groundwater Sediment	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSIFNGRITVRRLVVPSRGLGGATID
Ga0207684_100681341	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAVILLAFATPAPAGTLGLAEVRSPDGTLLGKAASGAFAYPGDGSVLRIGSARATAARVELRDVSMFNGRVTVRRLVVPARGLAGARV
Ga0207684_103571412	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLRRGLWLAAILLVFAAPARAGTVGLAEVRGADGTLIGKAGVGAYAYPADGSVLRIGSSRVTAARVELRNVSMFNGRITVRLIVVPSRGLAGARIDGLVVDGTGFVVGPNAIIPLDGGSYVVA
Ga0207693_113672971	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLRRGFGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAGSGAYSYPSDGSILRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGA
Ga0207687_101355591	3300025927	Miscanthus Rhizosphere	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSPDGTLLGKAGSGAYSYPSDGSTLRIGSSRANAARVELRDVSMFNGRVTVRRLVVPSRGLGGARIEGLVVDGTSYVVGANAIIPLDGGSYIV
Ga0209056_106979011	3300026538	Soil	MLRRAAAVVFVFFVFAAPASAGSLGLAEVRASDGTLIGKAQAGAYAYPSDGSVLRIGSSRVNTARVELRDVAMFSGRVTVDRIVVPARGLLGARIDGLVVDGKSYVVGPNAII
Ga0209842_10110071	3300027379	Groundwater Sand	MLRRGVGVAIVFLALAAPARAGTLGLAEVRSSDGTLIGRAGAGAYSYPADGSVLRIGSARATAASVELRDVTMFNGRVTVRRLVVPSRGLGGARVEGLVVDGTGYVVGPNALIPL
Ga0209701_104928101	3300027862	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGGTLGLAEVRSSDGTLIGRAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRVTVRRVVVPSRGLQGARIDGLVVDGTSYVVGPNAII
Ga0209590_104153001	3300027882	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARAGGTLGLAEVRSSDGTLIGKAGAGAYSYPADGSILRIGSSRATAARVVLRNV
Ga0209590_108789251	3300027882	Vadose Zone Soil	MLRRGLGLAAILLVFAAPARTGTLGLAEVRSADGTLLGRAGAGAYSYPADGSILRIGWSRVTSARFELRNVSMFNGRITVRRLVVPSRGLEGARIDGLV
Ga0307322_101305171	3300028710	Soil	MLRRGFGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAASGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLVVPSRGLGGAKVEGLVVDGTGYVVGANAIIPLDGGS
Ga0307309_101425161	3300028714	Soil	VAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITVRRL
Ga0307313_102498282	3300028715	Soil	VAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITVRRLVVPSRGLGSARI
Ga0307311_100869853	3300028716	Soil	MLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVVPSR
Ga0307311_101214903	3300028716	Soil	MLRRGVGVGIVALAFAAPAQAGTLGLAEVRSADGTLIGKAGPGGYAYPADGSVIRIGSARATAAKVELRNVSMFNGRVTVSRL
Ga0307307_101941681	3300028718	Soil	MLRRGLGVAAVLLVFAAPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRD
Ga0307307_102174232	3300028718	Soil	MLRRGVGVGIVALAFAAPAQAGTLGLAEVRSADGTLIGKAGPGGYAYPADGSVIRIGSARATAAKVELRNVSMFNGRVTVSRLVVPSRGLEGAR
Ga0307307_102931871	3300028718	Soil	MPSWSFFSFVSNIRASMLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVVPSR
Ga0307282_101178433	3300028784	Soil	MPSWSFFSFVSNIRASMLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVV
Ga0307323_100617071	3300028787	Soil	MLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVR
Ga0307287_101474721	3300028796	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLVVPSRGLGGATIGGLVVDGTSYVVGPNAII
Ga0307284_103912831	3300028799	Soil	MLRRGFGVAAVLLVFASPARAGTLGLAEVRSADGTLLGKAASGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLVVPSR
Ga0307292_102539471	3300028811	Soil	VAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITVRRLVVPSRGLGSARIDGL
Ga0307302_100747153	3300028814	Soil	MLRRGFGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITVRRLVVPSRGLGSARIDGLVVDGTGYVVGPN
Ga0307302_103419281	3300028814	Soil	MLRRGLGVAAVLLVFASPARAGTLGVAEVRSSDGTLIGKAGAGAYSYPADGSILRIGASRANAAQVELRDVSMFNGRITVRRLVMPSRGLDGARIEGLVVDGTGYVVGPNAIIPLDGGSYIVALQEAVSP
Ga0307310_102264671	3300028824	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSADGTLIGKAGAGAYAYPADGSILRIGSSRADAARVELRDVSMFNGRITVRRLMVPSRGLAGARIDGLVVDGTGYVVGPNAIIPLDGGSYVVAL
Ga0307310_102331301	3300028824	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRSSDGTLIGKAGAGAYSYPADGSILRIGASRANAAQVELRDVSMFNGRITVRRLVMPSRGLDGARIEGLVVDGTGYVVGPNAIIPLEG
Ga0307312_108590262	3300028828	Soil	MLRRGLGMAAVLLVFASPARAWTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLVVP
Ga0307278_102103411	3300028878	Soil	MLAAPARAATLGLAEVRGSDGTLIGRAGAGAYAYPTDGSVIRIGWARATAARVELRNVSMFNGRVTVKRLVAPARGLKGARVDGLVVDGTAYVVGPNALISLGGGSY
Ga0307277_101403423	3300028881	Soil	MAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRIT
Ga0307277_101577902	3300028881	Soil	MLRRGLGVAAILLVFAAPARAGTLGLAEVRSADGTLLGKAGAGAYSYPADGSILRIGSSRATAARVELRNVSMFNGRITVRRLVVPSRGLQGARIDGLVVDGTGYVVGPNAIIPLDGGSYIVALQEAVSPG
Ga0307277_104826001	3300028881	Soil	MLRRGVGVGIVALAFAAPAQAGTLGLAEVRSADGTLIGKAGPGGYAYPADGSVIRIGSARATAAKVELRNVSMFNGRVTVSRLVVPSRGLEGARVDGLVVDGTGYVVGPNALIPLDGGSYLVVLQEAV
Ga0307308_100777731	3300028884	Soil	MLRRGLGVAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLMVPSRGLGGARIEGLVVDGTGYVVGP
Ga0307308_103346062	3300028884	Soil	MRRGLGMAAVLLVFASPARAGTLGLAEVRAADGTLIGKAGAGAYAYPADGSILRIGSSRANAARVELRDVSMFNGRITVRRLVVPSRGLGGATIDGLVVDG
Ga0307500_101313271	3300031198	Soil	MLRRGLGVAAVLLVFTAPARAAGTLGPAEVRSADGTLIGKAGAGSYAYPADGSVLRIGSSRATAARVVLQDVSMFNGRVTVRRLVVPARGLAGARVEGLVVDGTSYVVGPNAII
Ga0310811_104318511	3300033475	Soil	MVRRAAGVAALLLVLTAPARAATLGLAEVRGTDGSLIGKAGGGAYSYPADGSVLRIGWSRATAARVELRNISMFNGRVTVKRLVVPARGLQGARVDGLVVDGTGYVVGPNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070389

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences