Metagenome / Metatranscriptome Family F070388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	48 residues
Representative Sequence	TMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Number of Associated Samples	69
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.07 %
% of genes near scaffold ends (potentially truncated)	92.68 %
% of genes from short scaffolds (< 2000 bps)	91.06 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.309 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.707 % of family members)
Environment Ontology (ENVO)	Unclassified (59.350 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.602 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.64% β-sheet: 0.00% Coil/Unstructured: 89.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13202	EF-hand_5	5.69
PF07758	DUF1614	2.44
PF00196	GerE	1.63
PF13186	SPASM	1.63
PF00239	Resolvase	1.63
PF09899	DUF2126	0.81
PF13676	TIR_2	0.81
PF07730	HisKA_3	0.81
PF07813	LTXXQ	0.81
PF10056	DUF2293	0.81
PF13833	EF-hand_8	0.81
PF00216	Bac_DNA_binding	0.81
PF00085	Thioredoxin	0.81
PF00873	ACR_tran	0.81
PF01523	PmbA_TldD	0.81
PF02705	K_trans	0.81
PF07045	DUF1330	0.81
PF11941	DUF3459	0.81
PF13899	Thioredoxin_7	0.81
PF01799	Fer2_2	0.81
PF13649	Methyltransf_25	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.25
COG4089	Uncharacterized membrane protein	Function unknown [S]	2.44
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.63
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.63
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.81
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.81
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.81
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.81
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.81
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.81
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.81
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.31 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.62 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	68.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.26 %
Unclassified	root	N/A	5.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	68.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.94 %
Unclassified	root	N/A	5.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	68.29 %
Unclassified	root	N/A	5.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.88 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	68.29 %
Unclassified	root	N/A	5.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.07 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	68.29 %
Unclassified	root	N/A	5.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.07 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10093892	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	743	Open in IMG/M
3300005332\|Ga0066388_100294740	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2266	Open in IMG/M
3300005332\|Ga0066388_100526174	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300005332\|Ga0066388_101425664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300005332\|Ga0066388_103249863	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	830	Open in IMG/M
3300005332\|Ga0066388_103661231	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	784	Open in IMG/M
3300005332\|Ga0066388_105986383	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	614	Open in IMG/M
3300005363\|Ga0008090_15308879	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	775	Open in IMG/M
3300005764\|Ga0066903_101320091	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1349	Open in IMG/M
3300005764\|Ga0066903_102442447	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1011	Open in IMG/M
3300005764\|Ga0066903_103608370	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	833	Open in IMG/M
3300005764\|Ga0066903_103633501	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_106228860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300006175\|Ga0070712_100927714	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	751	Open in IMG/M
3300006755\|Ga0079222_10232221	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1142	Open in IMG/M
3300010048\|Ga0126373_10772902	Not Available	1021	Open in IMG/M
3300010048\|Ga0126373_10854579	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	973	Open in IMG/M
3300010048\|Ga0126373_11110242	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	857	Open in IMG/M
3300010048\|Ga0126373_11711097	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	693	Open in IMG/M
3300010048\|Ga0126373_11798817	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	676	Open in IMG/M
3300010358\|Ga0126370_10259304	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1354	Open in IMG/M
3300010359\|Ga0126376_10772505	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300010361\|Ga0126378_10682991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300010361\|Ga0126378_10745709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300010361\|Ga0126378_11814322	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	694	Open in IMG/M
3300010362\|Ga0126377_10659002	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300010366\|Ga0126379_13494134	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	526	Open in IMG/M
3300010376\|Ga0126381_103687426	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	600	Open in IMG/M
3300010398\|Ga0126383_10449014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1338	Open in IMG/M
3300012198\|Ga0137364_10941297	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	654	Open in IMG/M
3300012199\|Ga0137383_10771372	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	702	Open in IMG/M
3300012206\|Ga0137380_11713970	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	512	Open in IMG/M
3300012207\|Ga0137381_11295635	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	621	Open in IMG/M
3300012207\|Ga0137381_11544228	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	555	Open in IMG/M
3300012210\|Ga0137378_10061789	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3385	Open in IMG/M
3300012971\|Ga0126369_10412729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1391	Open in IMG/M
3300012971\|Ga0126369_12421695	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	611	Open in IMG/M
3300016270\|Ga0182036_11068424	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	667	Open in IMG/M
3300016270\|Ga0182036_11239535	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	621	Open in IMG/M
3300016294\|Ga0182041_10110685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2040	Open in IMG/M
3300016294\|Ga0182041_12073398	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	530	Open in IMG/M
3300016319\|Ga0182033_10987081	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	749	Open in IMG/M
3300016319\|Ga0182033_11054362	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	725	Open in IMG/M
3300016319\|Ga0182033_11804410	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	555	Open in IMG/M
3300016341\|Ga0182035_10098772	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300016341\|Ga0182035_10905949	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	778	Open in IMG/M
3300016341\|Ga0182035_11105559	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	705	Open in IMG/M
3300016341\|Ga0182035_11294372	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	653	Open in IMG/M
3300016357\|Ga0182032_10415278	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300016357\|Ga0182032_10473516	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1026	Open in IMG/M
3300016371\|Ga0182034_10711865	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	854	Open in IMG/M
3300016371\|Ga0182034_10729988	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	844	Open in IMG/M
3300016371\|Ga0182034_10959149	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	737	Open in IMG/M
3300016387\|Ga0182040_10722483	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	816	Open in IMG/M
3300016387\|Ga0182040_11711243	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	537	Open in IMG/M
3300016404\|Ga0182037_10621647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300016404\|Ga0182037_10716362	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	857	Open in IMG/M
3300016404\|Ga0182037_11009686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	725	Open in IMG/M
3300016404\|Ga0182037_11883912	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	535	Open in IMG/M
3300016422\|Ga0182039_11042612	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	735	Open in IMG/M
3300016422\|Ga0182039_11718836	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	574	Open in IMG/M
3300016422\|Ga0182039_12251770	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	503	Open in IMG/M
3300016445\|Ga0182038_10910972	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	775	Open in IMG/M
3300016445\|Ga0182038_11812124	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	551	Open in IMG/M
3300017924\|Ga0187820_1103484	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	821	Open in IMG/M
3300017942\|Ga0187808_10400233	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	628	Open in IMG/M
3300017970\|Ga0187783_10013193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6088	Open in IMG/M
3300017970\|Ga0187783_11182802	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	551	Open in IMG/M
3300017973\|Ga0187780_10221757	Not Available	1321	Open in IMG/M
3300017974\|Ga0187777_10627321	Not Available	759	Open in IMG/M
3300018086\|Ga0187769_10681135	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	777	Open in IMG/M
3300020150\|Ga0187768_1014790	Not Available	1631	Open in IMG/M
3300020580\|Ga0210403_10204375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1621	Open in IMG/M
3300026865\|Ga0207746_1021593	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	533	Open in IMG/M
3300031545\|Ga0318541_10766082	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	538	Open in IMG/M
3300031573\|Ga0310915_10031133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3333	Open in IMG/M
3300031573\|Ga0310915_10044543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2840	Open in IMG/M
3300031679\|Ga0318561_10719118	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	549	Open in IMG/M
3300031680\|Ga0318574_10256988	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300031682\|Ga0318560_10140324	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1274	Open in IMG/M
3300031682\|Ga0318560_10407215	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300031719\|Ga0306917_11301460	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	562	Open in IMG/M
3300031724\|Ga0318500_10024334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	2356	Open in IMG/M
3300031736\|Ga0318501_10531530	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	643	Open in IMG/M
3300031736\|Ga0318501_10609571	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	599	Open in IMG/M
3300031744\|Ga0306918_10069207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2415	Open in IMG/M
3300031744\|Ga0306918_11549746	Not Available	506	Open in IMG/M
3300031747\|Ga0318502_10193457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300031747\|Ga0318502_10689639	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	617	Open in IMG/M
3300031763\|Ga0318537_10386715	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	516	Open in IMG/M
3300031768\|Ga0318509_10043655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	2256	Open in IMG/M
3300031768\|Ga0318509_10398797	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	769	Open in IMG/M
3300031768\|Ga0318509_10468125	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	705	Open in IMG/M
3300031768\|Ga0318509_10604334	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	611	Open in IMG/M
3300031768\|Ga0318509_10738870	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	545	Open in IMG/M
3300031781\|Ga0318547_10758142	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	604	Open in IMG/M
3300031797\|Ga0318550_10240646	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	878	Open in IMG/M
3300031819\|Ga0318568_10535906	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	730	Open in IMG/M
3300031879\|Ga0306919_10110645	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300031879\|Ga0306919_11521903	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	503	Open in IMG/M
3300031890\|Ga0306925_10188541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2222	Open in IMG/M
3300031890\|Ga0306925_10524956	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1258	Open in IMG/M
3300031890\|Ga0306925_11715854	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	605	Open in IMG/M
3300031897\|Ga0318520_10108042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1570	Open in IMG/M
3300031897\|Ga0318520_10271561	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300031897\|Ga0318520_10352308	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	894	Open in IMG/M
3300031912\|Ga0306921_10782251	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1091	Open in IMG/M
3300031946\|Ga0310910_10442163	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1031	Open in IMG/M
3300031947\|Ga0310909_11629209	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	511	Open in IMG/M
3300031954\|Ga0306926_11215893	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300031962\|Ga0307479_10533704	Not Available	1156	Open in IMG/M
3300032001\|Ga0306922_11199945	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	772	Open in IMG/M
3300032025\|Ga0318507_10254129	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	762	Open in IMG/M
3300032025\|Ga0318507_10506841	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	525	Open in IMG/M
3300032035\|Ga0310911_10101277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1580	Open in IMG/M
3300032035\|Ga0310911_10346401	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	857	Open in IMG/M
3300032035\|Ga0310911_10551174	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	669	Open in IMG/M
3300032065\|Ga0318513_10185788	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300032091\|Ga0318577_10198832	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	958	Open in IMG/M
3300032091\|Ga0318577_10317464	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	745	Open in IMG/M
3300032180\|Ga0307471_101426094	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	852	Open in IMG/M
3300032180\|Ga0307471_101569467	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	815	Open in IMG/M
3300032261\|Ga0306920_101589183	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.37%
Aquatic	Environmental → Aquatic	1.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.37%
Freshwater	Environmental → Aquatic → Freshwater	1.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.93%
Loam	Environmental → Terrestrial → Soil → Loam	10.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100938923	3300000597	Forest Soil	NQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0066388_1002947404	3300005332	Tropical Forest Soil	LGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0066388_1005261743	3300005332	Tropical Forest Soil	MTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRARPD
Ga0066388_1014256641	3300005332	Tropical Forest Soil	GGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA*
Ga0066388_1032498631	3300005332	Tropical Forest Soil	PVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0066388_1036612312	3300005332	Tropical Forest Soil	LGFESAKEFWEHHPLYNSWKFKGWACQFGNRAPPDRGKA*
Ga0066388_1059863831	3300005332	Tropical Forest Soil	GGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPNRGKA*
Ga0008090_153088791	3300005363	Tropical Rainforest Soil	NSNQEQLTMGGCLGLLGFESAKDFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0066903_1013200911	3300005764	Tropical Forest Soil	GGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0066903_1024424471	3300005764	Tropical Forest Soil	CLGLEGFESAKEFWEHHPLYHTWKLKGWACQIGNRAAPERGKI*
Ga0066903_1036083702	3300005764	Tropical Forest Soil	MAGCLGLVGFESAKEFWGHHPLYHNWKFKGWACQIGNRAAPEYGKV*
Ga0066903_1036335011	3300005764	Tropical Forest Soil	PVVNSNQEQVTMTGCLGLEGFESAKEFWEHHPLYHNWKFKRWACQISNRAAPEHGKV*
Ga0066903_1062288602	3300005764	Tropical Forest Soil	GFESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0070712_1009277143	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA*
Ga0079222_102322212	3300006755	Agricultural Soil	GLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA*
Ga0126373_107729022	3300010048	Tropical Forest Soil	MGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDR
Ga0126373_108545792	3300010048	Tropical Forest Soil	VVNSNQEQLTMGGCLGLLGFESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0126373_111102422	3300010048	Tropical Forest Soil	GFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA*
Ga0126373_117110972	3300010048	Tropical Forest Soil	VVNCLGLEGFESAKEFWEHHPLYHTWKLKGWACQIGNRAAPERGKI*
Ga0126373_117988171	3300010048	Tropical Forest Soil	LGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0126370_102593043	3300010358	Tropical Forest Soil	MTEPVVNSNQEQLTMGGCLGLLGFESAKEFWERHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0126376_107725052	3300010359	Tropical Forest Soil	EPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA*
Ga0126378_106829911	3300010361	Tropical Forest Soil	MNEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKLKGWACQFGNRAPPDRGKA
Ga0126378_107457093	3300010361	Tropical Forest Soil	CLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0126378_118143222	3300010361	Tropical Forest Soil	MTSCLGLEGFESAKEFWEQHPLYHNWKFKGWACQIGNRAAPEHGKV*
Ga0126377_106590022	3300010362	Tropical Forest Soil	MGGCLGLLGFESAKEFWEHHPLYHSWQFKGWACQFGNRAPPDRGKA*
Ga0126379_134941341	3300010366	Tropical Forest Soil	EQLTMGGCLGLLGFESAKEFWEHHPLYPTWKFKGWACQFGNRAPPDRGKA*
Ga0126381_1036874261	3300010376	Tropical Forest Soil	AKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0126383_104490143	3300010398	Tropical Forest Soil	LGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0137364_109412972	3300012198	Vadose Zone Soil	MTERVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0137383_107713721	3300012199	Vadose Zone Soil	RVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA*
Ga0137380_117139702	3300012206	Vadose Zone Soil	MTERVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWVCQFGNRAPPDRGKA
Ga0137381_112956352	3300012207	Vadose Zone Soil	MTERVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFNGWACQIGNHAPPDRGKA
Ga0137381_115442281	3300012207	Vadose Zone Soil	SNQEQLTMGGCLGLLGFESAKEFCEHHPLYHTWKFKGWACQFGNRAPPDRGKA*
Ga0137378_100617891	3300012210	Vadose Zone Soil	GCLGLLGFESAKEFWGHHPLYHSWKFKGWVCQFGNRAPPDRGKA*
Ga0126369_104127293	3300012971	Tropical Forest Soil	VVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA*
Ga0126369_124216951	3300012971	Tropical Forest Soil	QEQLTMGGCLGLLGFESAREFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA*
Ga0182036_110684241	3300016270	Soil	QEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0182036_112395352	3300016270	Soil	GFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRSKA
Ga0182041_101106851	3300016294	Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNRAPPE
Ga0182041_120733982	3300016294	Soil	VNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182033_109870813	3300016319	Soil	CLGLLGFESAKEFWERHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0182033_110543622	3300016319	Soil	GFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0182033_118044101	3300016319	Soil	TEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182035_100987721	3300016341	Soil	TMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0182035_109059491	3300016341	Soil	NSNQEQLTMGGCLGLLGFESAKEFWERHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182035_111055592	3300016341	Soil	GCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0182035_112943721	3300016341	Soil	NSNQEQLTLGGCLGLLGFESAKEFWEHHPLYPTWKFKGWACQFGNRAPPDRGKA
Ga0182032_104152783	3300016357	Soil	SNQEQLTMGGCLGLLGFESAREFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0182032_104735164	3300016357	Soil	SAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182034_107118653	3300016371	Soil	TCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0182034_107299881	3300016371	Soil	EPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYNSWKFKGWACQFGNRAPPDRGKA
Ga0182034_109591491	3300016371	Soil	TCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182040_107224833	3300016387	Soil	FESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182040_117112432	3300016387	Soil	VDSNQEQLTMGGCLGLLGFESAREFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0182037_106216471	3300016404	Soil	QLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0182037_107163622	3300016404	Soil	NSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0182037_110096862	3300016404	Soil	VVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182037_118839122	3300016404	Soil	GGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNSAPPDRGKA
Ga0182039_110426123	3300016422	Soil	TEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0182039_117188361	3300016422	Soil	QLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0182039_122517702	3300016422	Soil	TCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHIWKFKGWACQFGNRAPPDRGKA
Ga0182038_109109722	3300016445	Soil	LGLLGFESAKEFWERHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0182038_118121241	3300016445	Soil	GTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0187820_11034843	3300017924	Freshwater Sediment	VVNSNQEQMTMGGCLGLLGFESAKEFWERHPLYHAWKFKGWACQIGNRAPPERGKA
Ga0187808_104002331	3300017942	Freshwater Sediment	TPVVDSNQDLVTMGGCMGIAGFESAKEFWEHHPLYHNWQFKGWSCQIGNRALPAKSKA
Ga0187783_100131935	3300017970	Tropical Peatland	SAKEFWEHHPLYHSWQFKGWACQIGNGAPPEKRKA
Ga0187783_111828021	3300017970	Tropical Peatland	MGGCLGVAGFESAKEFWEQHPIYHSWKFKGWSCQIGNRAPPAKSNA
Ga0187780_102217572	3300017973	Tropical Peatland	MTGCLGLEGFESAKEFWEHHPLYHTWKLRGGACQIGNRV
Ga0187777_106273211	3300017974	Tropical Peatland	MTGCLGLEGFESAKEFWEHHPLYHTWKLRGGACQIGNRVAPERGKI
Ga0187769_106811351	3300018086	Tropical Peatland	GLESAKEFWEHHPLYRSWQFKGWTCQIGNRAPPEKRKA
Ga0187768_10147901	3300020150	Tropical Peatland	CMGLEGFESAKEFWEHHPLYHSWQFKGWACQIGNSAPPDKRNT
Ga0210403_102043753	3300020580	Soil	LGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0207746_10215931	3300026865	Tropical Forest Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRG
Ga0318541_107660822	3300031545	Soil	NQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0310915_100311333	3300031573	Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNRAPPERGKA
Ga0310915_100445431	3300031573	Soil	EPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318561_107191181	3300031679	Soil	GFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0318574_102569882	3300031680	Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNRAPPERG
Ga0318560_101403241	3300031682	Soil	TEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318560_104072152	3300031682	Soil	TMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0306917_113014601	3300031719	Soil	EQLTMGGCLGPLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0318500_100243341	3300031724	Soil	EQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0318501_105315301	3300031736	Soil	NSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0318501_106095711	3300031736	Soil	SGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0306918_100692071	3300031744	Soil	ESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0306918_115497461	3300031744	Soil	TMTGCLGLEGFESAKEFWEHHPFITTGNKGWACQIGNRAAPEHGKI
Ga0318502_101934571	3300031747	Soil	LGLLGFKSAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318502_106896391	3300031747	Soil	LGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0318537_103867152	3300031763	Soil	CLTEPAVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGK
Ga0318509_100436553	3300031768	Soil	GCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0318509_103987971	3300031768	Soil	TCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYNSWKFKGWACQFGNRAPPDRGKA
Ga0318509_104681251	3300031768	Soil	LTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318509_106043341	3300031768	Soil	GLLGFESAKEFWKHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0318509_107388701	3300031768	Soil	ESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318547_107581421	3300031781	Soil	MTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318550_102406462	3300031797	Soil	VNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNRAPPERGKA
Ga0318568_105359061	3300031819	Soil	LTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0306919_101106451	3300031879	Soil	EQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0306919_115219031	3300031879	Soil	EQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0306925_101885411	3300031890	Soil	PVVNSSQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0306925_105249564	3300031890	Soil	TMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNSAPPDRGKA
Ga0306925_117158541	3300031890	Soil	GLLGFESAKEFWEHHPLYHTWKFKGWACQFDNRAPPERGKA
Ga0318520_101080423	3300031897	Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGK
Ga0318520_102715611	3300031897	Soil	LTMGGCLGLLGFESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0318520_103523083	3300031897	Soil	VVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYNSWKFKGWACQFGNRAPPDRGKA
Ga0306921_107822511	3300031912	Soil	GLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0310910_104421631	3300031946	Soil	SNQEHLTMGGCLGLLGFESAKEFWERHPLYHTWKFKGWACQFGNRAPPEHGKA
Ga0310909_116292091	3300031947	Soil	MGGCLGLLGFESAKEFWEHHPLYHNWKFKGWACQFGNRAPPERGKA
Ga0306926_112158932	3300031954	Soil	MGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0307479_105337042	3300031962	Hardwood Forest Soil	GLLGFESAKDFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA
Ga0306922_111999451	3300032001	Soil	QEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318507_102541291	3300032025	Soil	VVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318507_105068411	3300032025	Soil	ESAKEFWEHHPLYNSWKFKGWACQFGNRAPPDRGKA
Ga0310911_101012771	3300032035	Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNR
Ga0310911_103464011	3300032035	Soil	EGMESAKEFWQHHPLYHSWQFKGWACQIGNSAPPDKRNT
Ga0310911_105511741	3300032035	Soil	GFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318513_101857882	3300032065	Soil	LTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPERGKA
Ga0318577_101988322	3300032091	Soil	SNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKGWACQFGNRAPPDRGKA
Ga0318577_103174641	3300032091	Soil	LTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWAGQFGNRAPPERGKA
Ga0307471_1014260942	3300032180	Hardwood Forest Soil	MGGCLGLLGFESAKEFWEHHPLYHTWKFKGCACQFGN
Ga0307471_1015694671	3300032180	Hardwood Forest Soil	LTMGDCLGLLGFESAKEFWEHHPLYHTWKFKGWACQLGNRAPPDRGKA
Ga0306920_1015891832	3300032261	Soil	NSTQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKGWACQFGNRAPPDRGKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences