Metagenome / Metatranscriptome Family F070359

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070359
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	56 residues
Representative Sequence	MSTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEVTRAARKH
Number of Associated Samples	83
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.99 %
% of genes near scaffold ends (potentially truncated)	26.02 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.285 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (43.089 % of family members)
Environment Ontology (ENVO)	Unclassified (38.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.033 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF04392	ABC_sub_bind	6.50
PF10592	AIPR	4.88
PF03050	DDE_Tnp_IS66	1.63
PF00753	Lactamase_B	1.63
PF13531	SBP_bac_11	1.63
PF05866	RusA	0.81
PF12071	DUF3551	0.81
PF00034	Cytochrom_C	0.81
PF01042	Ribonuc_L-PSP	0.81
PF00486	Trans_reg_C	0.81
PF04226	Transgly_assoc	0.81
PF13360	PQQ_2	0.81
PF06537	DHOR	0.81
PF03472	Autoind_bind	0.81
PF07536	HWE_HK	0.81
PF13795	HupE_UreJ_2	0.81
PF00990	GGDEF	0.81
PF02518	HATPase_c	0.81
PF01139	RtcB	0.81
PF13505	OMP_b-brl	0.81
PF05231	MASE1	0.81
PF13669	Glyoxalase_4	0.81
PF03747	ADP_ribosyl_GH	0.81
PF00561	Abhydrolase_1	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.50
COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	Transcription [K]	1.63
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.63
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.81
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.81
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.81
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.81
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.81
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.81
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.81
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.81
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.81
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
All Organisms	root	All Organisms	44.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
cellular organisms	root	All Organisms → cellular organisms	44.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.01 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.25 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.25 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.28 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.25 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.81 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100287336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1529	Open in IMG/M
3300002917\|JGI25616J43925_10059337	Not Available	1637	Open in IMG/M
3300002917\|JGI25616J43925_10244096	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300004633\|Ga0066395_10011896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3245	Open in IMG/M
3300004633\|Ga0066395_10730403	Not Available	590	Open in IMG/M
3300005332\|Ga0066388_100286928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2289	Open in IMG/M
3300005332\|Ga0066388_100637524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1682	Open in IMG/M
3300005332\|Ga0066388_103316826	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005542\|Ga0070732_10510994	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005555\|Ga0066692_10563506	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_100177757	Not Available	3130	Open in IMG/M
3300005764\|Ga0066903_100564940	Not Available	1957	Open in IMG/M
3300005764\|Ga0066903_105550686	Not Available	664	Open in IMG/M
3300005764\|Ga0066903_108713580	Not Available	516	Open in IMG/M
3300005921\|Ga0070766_10090155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1800	Open in IMG/M
3300006028\|Ga0070717_10199050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1754	Open in IMG/M
3300006176\|Ga0070765_100204862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1792	Open in IMG/M
3300007258\|Ga0099793_10031337	Not Available	2261	Open in IMG/M
3300007258\|Ga0099793_10054439	All Organisms → cellular organisms → Bacteria → Proteobacteria	1774	Open in IMG/M
3300007258\|Ga0099793_10437237	Not Available	646	Open in IMG/M
3300007788\|Ga0099795_10502195	Not Available	566	Open in IMG/M
3300009038\|Ga0099829_10105648	Not Available	2197	Open in IMG/M
3300009038\|Ga0099829_10291527	Not Available	1337	Open in IMG/M
3300009038\|Ga0099829_10991550	Not Available	697	Open in IMG/M
3300009089\|Ga0099828_11860288	Not Available	528	Open in IMG/M
3300009090\|Ga0099827_10293429	Not Available	1374	Open in IMG/M
3300009143\|Ga0099792_10044822	Not Available	2128	Open in IMG/M
3300009143\|Ga0099792_10240726	Not Available	1049	Open in IMG/M
3300009143\|Ga0099792_10355722	Not Available	885	Open in IMG/M
3300009523\|Ga0116221_1116931	Not Available	1171	Open in IMG/M
3300010047\|Ga0126382_12365073	Not Available	515	Open in IMG/M
3300010159\|Ga0099796_10075678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1224	Open in IMG/M
3300010358\|Ga0126370_10031494	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M
3300010358\|Ga0126370_10420988	Not Available	1104	Open in IMG/M
3300010360\|Ga0126372_10199623	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300010360\|Ga0126372_10680514	Not Available	1001	Open in IMG/M
3300010361\|Ga0126378_10094717	All Organisms → cellular organisms → Bacteria	2931	Open in IMG/M
3300010361\|Ga0126378_10100527	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300010362\|Ga0126377_10600536	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300010362\|Ga0126377_12325614	Not Available	612	Open in IMG/M
3300010366\|Ga0126379_10173578	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300010379\|Ga0136449_102530510	Not Available	735	Open in IMG/M
3300010398\|Ga0126383_12667711	Not Available	583	Open in IMG/M
3300011270\|Ga0137391_10384151	Not Available	1202	Open in IMG/M
3300011271\|Ga0137393_10484385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1061	Open in IMG/M
3300012096\|Ga0137389_10130689	Not Available	2035	Open in IMG/M
3300012096\|Ga0137389_11312206	Not Available	618	Open in IMG/M
3300012189\|Ga0137388_10302275	Not Available	1467	Open in IMG/M
3300012189\|Ga0137388_10954185	Not Available	792	Open in IMG/M
3300012189\|Ga0137388_11482083	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012202\|Ga0137363_10096503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2237	Open in IMG/M
3300012205\|Ga0137362_11293987	Not Available	614	Open in IMG/M
3300012361\|Ga0137360_10037828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3393	Open in IMG/M
3300012361\|Ga0137360_10137525	Not Available	1920	Open in IMG/M
3300012361\|Ga0137360_10242094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1478	Open in IMG/M
3300012361\|Ga0137360_10393475	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300012362\|Ga0137361_11683711	Not Available	554	Open in IMG/M
3300012362\|Ga0137361_11702053	Not Available	550	Open in IMG/M
3300012582\|Ga0137358_10240969	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300012582\|Ga0137358_10517715	Not Available	803	Open in IMG/M
3300012582\|Ga0137358_10865168	Not Available	595	Open in IMG/M
3300012683\|Ga0137398_10577758	Not Available	776	Open in IMG/M
3300012683\|Ga0137398_10678992	Not Available	715	Open in IMG/M
3300012685\|Ga0137397_10051611	All Organisms → cellular organisms → Bacteria → Proteobacteria	2952	Open in IMG/M
3300012685\|Ga0137397_10432610	Not Available	980	Open in IMG/M
3300012917\|Ga0137395_10135615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1673	Open in IMG/M
3300012917\|Ga0137395_10316534	Not Available	1108	Open in IMG/M
3300012923\|Ga0137359_10257992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1554	Open in IMG/M
3300012924\|Ga0137413_10458533	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300012925\|Ga0137419_10103846	Not Available	1973	Open in IMG/M
3300012927\|Ga0137416_11035197	Not Available	734	Open in IMG/M
3300012971\|Ga0126369_11179649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	855	Open in IMG/M
3300015241\|Ga0137418_10497277	Not Available	976	Open in IMG/M
3300015242\|Ga0137412_10796065	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300015245\|Ga0137409_10177887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300016294\|Ga0182041_11613967	Not Available	599	Open in IMG/M
3300016319\|Ga0182033_11433087	Not Available	622	Open in IMG/M
3300016371\|Ga0182034_11729499	Not Available	550	Open in IMG/M
3300016387\|Ga0182040_10030554	All Organisms → cellular organisms → Bacteria	3146	Open in IMG/M
3300020579\|Ga0210407_10482577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300020581\|Ga0210399_10659128	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300021086\|Ga0179596_10093292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1354	Open in IMG/M
3300021088\|Ga0210404_10164976	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300021168\|Ga0210406_10811700	Not Available	711	Open in IMG/M
3300021170\|Ga0210400_11178086	Not Available	618	Open in IMG/M
3300021178\|Ga0210408_10041342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3620	Open in IMG/M
3300021180\|Ga0210396_10667466	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300021420\|Ga0210394_11215247	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021560\|Ga0126371_10069461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3423	Open in IMG/M
3300021560\|Ga0126371_12297632	Not Available	651	Open in IMG/M
3300022528\|Ga0242669_1110855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300022724\|Ga0242665_10130727	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300026304\|Ga0209240_1014364	Not Available	3020	Open in IMG/M
3300026355\|Ga0257149_1019863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	914	Open in IMG/M
3300026355\|Ga0257149_1048308	Not Available	613	Open in IMG/M
3300026359\|Ga0257163_1004795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1917	Open in IMG/M
3300026467\|Ga0257154_1063489	Not Available	580	Open in IMG/M
3300026481\|Ga0257155_1007184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300026508\|Ga0257161_1000393	All Organisms → cellular organisms → Bacteria → Proteobacteria	11132	Open in IMG/M
3300026508\|Ga0257161_1026434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300026515\|Ga0257158_1031141	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300026551\|Ga0209648_10043800	Not Available	3860	Open in IMG/M
3300026557\|Ga0179587_10064483	All Organisms → cellular organisms → Bacteria → Proteobacteria	2143	Open in IMG/M
3300026557\|Ga0179587_11194504	Not Available	501	Open in IMG/M
3300027635\|Ga0209625_1052010	Not Available	914	Open in IMG/M
3300027643\|Ga0209076_1170090	Not Available	605	Open in IMG/M
3300027903\|Ga0209488_10046611	Not Available	3187	Open in IMG/M
3300027903\|Ga0209488_10208245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1473	Open in IMG/M
3300027903\|Ga0209488_10357242	Not Available	1086	Open in IMG/M
3300027903\|Ga0209488_10468907	Not Available	926	Open in IMG/M
3300027903\|Ga0209488_11023676	Not Available	570	Open in IMG/M
3300028047\|Ga0209526_10016302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5150	Open in IMG/M
3300028047\|Ga0209526_10243356	Not Available	1233	Open in IMG/M
3300031543\|Ga0318516_10715915	Not Available	568	Open in IMG/M
3300031719\|Ga0306917_10997972	Not Available	654	Open in IMG/M
3300031720\|Ga0307469_10071082	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300031890\|Ga0306925_10923898	Not Available	896	Open in IMG/M
3300031942\|Ga0310916_10035544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3702	Open in IMG/M
3300031942\|Ga0310916_11624129	Not Available	524	Open in IMG/M
3300032001\|Ga0306922_10630825	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300032180\|Ga0307471_101116614	Not Available	954	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.99%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	43.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002873362	3300002245	Forest Soil	MSTQTKKDAITKAWTYAVLDALEAADEHTRLELARRLCPAGFQIVQLEMSRTSKH*
JGI25616J43925_100593373	3300002917	Grasslands Soil	VGIVNPADAQGGGGLMSTRDENDAMKKARTHAVLDAVEAADENTRLEIARMLCPAGFEIVEIEVTKAGWKH*
JGI25616J43925_102440961	3300002917	Grasslands Soil	MSTPDENDAMKKAWTYAVLDAVEAADEDTRLEIARILCPAGFEIVEIEVTRLARKH*
Ga0066395_100118963	3300004633	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLGAVKAADENTRLEIARILCPAGFEIVKIEATRAARKH*
Ga0066395_107304032	3300004633	Tropical Forest Soil	MLTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAARKH*
Ga0066388_1002869281	3300005332	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVETGATRAARKH*
Ga0066388_1006375242	3300005332	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIKATRASRKH*
Ga0066388_1033168261	3300005332	Tropical Forest Soil	GGGLMLTPDENDAMKKAWTYAVLDAVKAAEENTRLEIARILCPAGFEIVEIGATRAARKH
Ga0070732_105109942	3300005542	Surface Soil	MSIQNEYDAVTEAWTHAVLDALEAADESTRLEVARILCPAGFEIVQAEPTNGARH*
Ga0066692_105635061	3300005555	Soil	MLTPDENDAITKAWTYAVLDAVKAADENTRLEVARILCPAGFEIVEIEPTRAARKH*
Ga0066903_1001777575	3300005764	Tropical Forest Soil	MLTPDENDAMKKAWTFAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAARKH*
Ga0066903_1005649402	3300005764	Tropical Forest Soil	MSIQRECDAVTEAWTHAVLDALEAADESTRLEVARILCPAGFEIVEAGPTNGRRH*
Ga0066903_1055506861	3300005764	Tropical Forest Soil	MSIESEYDAVTEAWTHAVLDALEAADENTRLELARILCPAGFEIVQAEPTNGPRH*
Ga0066903_1087135802	3300005764	Tropical Forest Soil	MITRDVSDAMKRAWTFAVLDAVKAADENTRLEIARILCPAGFEIVEIE
Ga0070766_100901552	3300005921	Soil	MSIQSEYDAVREAWTHAVLDALQAADEDTRLEVARILCPAGFEIVQAEPANGPRH*
Ga0070717_101990503	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KAWTYAVLDALEAADEDTRLELARRLCPAGFEIIQLETVEARRH*
Ga0070765_1002048622	3300006176	Soil	MSSQGENDAVIESWTYAVLDALEAADDNTRLEIARILCPMGFEIVRVEVINLIKH*
Ga0099793_100313374	3300007258	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIKVTKAGWKH*
Ga0099793_100544391	3300007258	Vadose Zone Soil	TPDENDAMKKAWTYAVLDAIEEADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0099793_104372373	3300007258	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVT
Ga0099795_105021951	3300007788	Vadose Zone Soil	AQGRGGLMSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0099829_101056482	3300009038	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTTAAWKH*
Ga0099829_102915272	3300009038	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEVTRAARKH*
Ga0099829_109915502	3300009038	Vadose Zone Soil	MSNPEKKDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTRSTRKH*
Ga0099828_118602881	3300009089	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTKAARKH*
Ga0099827_102934294	3300009090	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0099792_100448224	3300009143	Vadose Zone Soil	MSTLNENDAMKKAWTYAVLDAVEAADEDTRLEIARILCPAGFEIVEIEVTRLARKH*
Ga0099792_102407261	3300009143	Vadose Zone Soil	MLTSDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTRAARKH*
Ga0099792_103557222	3300009143	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADQNTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0116222_14181611	3300009521	Peatlands Soil	MMDEIKSDATTQAWFDAVLDALVAADEMTRLEIARILCPTGFEIVADEVTNPDYARR*
Ga0116221_11169312	3300009523	Peatlands Soil	MMDEIKSDATTQAWFDAVLDALVAADEMTRLEIARILCPTGFEIVADEVTNARKH*
Ga0126382_123650731	3300010047	Tropical Forest Soil	SGAALMLTRYESDAMKKAWTYAVLDAVKAADENTRLEIVRVLCPAGFAIVEIEATRAARKH*
Ga0099796_100756782	3300010159	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEEADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0126370_100314943	3300010358	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVRAADENTRLEIARILCPAGFEIVETGATRAARKH*
Ga0126370_104209881	3300010358	Tropical Forest Soil	MLTPDENDAMKKAWTFAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAAAKH*
Ga0126372_101996231	3300010360	Tropical Forest Soil	NDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAARKH*
Ga0126372_106805142	3300010360	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIRATRASRKH*
Ga0126378_100947172	3300010361	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEAARAARKH*
Ga0126378_101005273	3300010361	Tropical Forest Soil	PDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVETGATRAARKH*
Ga0126377_106005363	3300010362	Tropical Forest Soil	MLTADESDAMKRAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIKATRASRKH*
Ga0126377_123256141	3300010362	Tropical Forest Soil	MKKAWTYAVLDAVRAADENTRLEIVRILCPAGFEIIEIEATRAARKH*
Ga0126379_101735783	3300010366	Tropical Forest Soil	MLTPDESDTLKKAWTYAVLDAVKAADENTRLEIARILCPDGFEIVETEASRAARKH*
Ga0136449_1003039776	3300010379	Peatlands Soil	MMDEIKSDATTQAWFDAVLDALVAADEMTRLEIARILCPTGFEIVADEVTN
Ga0136449_1025305102	3300010379	Peatlands Soil	MSAQGENDAMTKAWTFAVLDALEAADEDTRLEVVRILCPAGFEVVALEVAETRTQLVS*
Ga0126383_126677111	3300010398	Tropical Forest Soil	GGGLMLTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIRAARKH*
Ga0137391_103841511	3300011270	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTKAGWKH*
Ga0137393_104843852	3300011271	Vadose Zone Soil	MSTPDENDAMKQAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137389_101306892	3300012096	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADQNTRLEIARILCPAGFEIVEIEVARAARKH*
Ga0137389_113122062	3300012096	Vadose Zone Soil	RDEKDAMKKAWTYAVLEAVEAADENTRLEIARILCPAVFEIVESEVTRAARKH*
Ga0137388_103022754	3300012189	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137388_109541851	3300012189	Vadose Zone Soil	FLVSGDRRPADAQGRGGLTKTWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTMAAWKH*
Ga0137388_114820832	3300012189	Vadose Zone Soil	MSTRDENDAMKKAWTYLVLDAVEAADENTRLEIARILCPAGFEIVEIEVTRAAQKLGT*
Ga0137363_100965033	3300012202	Vadose Zone Soil	MLTPDENDAITKVWTYAVLDADKAADENTTLEIAPILCPAGFEIVEIEPTRAARKH*
Ga0137362_112939871	3300012205	Vadose Zone Soil	LTSDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTGAARKH*
Ga0137360_100378283	3300012361	Vadose Zone Soil	MLTPDENDAITKVWTYAVLDADKAADENTRLEIAPILCPAGFEIVEIEPTRAARKH*
Ga0137360_101375251	3300012361	Vadose Zone Soil	MLTSDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTGAARKH*
Ga0137360_102420942	3300012361	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADANTRLEIARILCPAGFEIVETEVARAVRKH*
Ga0137360_103934752	3300012361	Vadose Zone Soil	STPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137361_116837112	3300012362	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137361_117020532	3300012362	Vadose Zone Soil	MLTSDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPT
Ga0137358_102409691	3300012582	Vadose Zone Soil	ASGVETSGRGGGLMLTSDENDAITKAWTYAVLDAVNAADEKTMLKIVLILCPAGFEIVEIEPTRAARKH*
Ga0137358_105177152	3300012582	Vadose Zone Soil	MLTPDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTRAARKH
Ga0137358_108651681	3300012582	Vadose Zone Soil	RGGGSMLTPDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTRAARKH*
Ga0137398_105777583	3300012683	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEEADENTRLEIARILCPAGFEIVEIEVTRVARKH*
Ga0137398_106789922	3300012683	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVE
Ga0137397_100516112	3300012685	Vadose Zone Soil	MLTSDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137397_104326103	3300012685	Vadose Zone Soil	MSTPDENDAMKKAWTFAVLDAVKAADENTRLEIARILCPAGFEIVAIELTRAGWKH*
Ga0137395_101356153	3300012917	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEEVDENTRLEIARILCPAGFEIVEIEVTRAARKH*
Ga0137395_103165344	3300012917	Vadose Zone Soil	MSTPDENDAMKQAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAAR
Ga0137359_102579922	3300012923	Vadose Zone Soil	MLTPDENDAITKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTRAARKH*
Ga0137413_104585332	3300012924	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEEADENTRLEIARILCPAGFEIVEIEMTRAARKH*
Ga0137419_101038461	3300012925	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEMTRAARKH*
Ga0137416_110351971	3300012927	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIKVTKAGWKH*
Ga0126369_111796492	3300012971	Tropical Forest Soil	MKKAWTYAVLDAVKAADENTRLEIVRILCPAGFEIVEIEATRAARKH*
Ga0137418_104972772	3300015241	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTKAARKR*
Ga0137412_107960652	3300015242	Vadose Zone Soil	LNSQGRGGVMSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRVARKH*
Ga0137409_101778871	3300015245	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIKVTKAGWKH*
Ga0182041_116139672	3300016294	Soil	MLTADENEAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIE
Ga0182033_114330871	3300016319	Soil	MSIQSEYDAVAEAWTHAVLDALEGADENTRLELARILCPAGFEIVQADPTNGPRH
Ga0182034_117294991	3300016371	Soil	MSIQSEYDEVTEAWTHAVLDALEAADENTRLELARILCPAGFEIVQADPTNGPRH
Ga0182040_100305543	3300016387	Soil	MLTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGTTRAARKH
Ga0210407_104825772	3300020579	Soil	MSIQSEYDAVREAWTHAVLDALQAADEDTRLEVARILCPAGFEIVQAAPANGPRH
Ga0210399_106591281	3300020581	Soil	MSIQSEYDAVREAWTHAVLDALQAADEDTRLEVARILCPAGFEIVQAEPANGPRH
Ga0179596_100932922	3300021086	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEVTRAARKH
Ga0210404_101649762	3300021088	Soil	MSNPEKNDAMKKAWTYAILDAVEAADEKTRLEIARILCPAGFEIVEIEVTRSARKH
Ga0210406_108117001	3300021168	Soil	MSTQTKKDAITKAWTYAVLDALEAADEHTRLELARRLCPAGFQIVQLEMSRTSKH
Ga0210400_111780861	3300021170	Soil	QWRVRGTVKGGVMSTQTKKDAITKAWTYAVLDALEAADEHTRLELARRLCPAGFQIVQLEMSRALKH
Ga0210408_100413424	3300021178	Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEPTRAARNH
Ga0210396_106674662	3300021180	Soil	MSSQGENDAVIESWTYAVLDALEAADDNTRLEIARILCPMGFEIVRVEVINLIKH
Ga0210394_112152472	3300021420	Soil	MSSQGENDAVIESWTYAVLDALEAADDNTRLEIARILCPMGFEIVRVEVINLLKH
Ga0126371_100694613	3300021560	Tropical Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVETGATRAARKH
Ga0126371_122976321	3300021560	Tropical Forest Soil	MLTPDENDAMKKAWTFAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAARKH
Ga0242669_11108552	3300022528	Soil	MSIQSEYDAVREAWTHAVLDALQAADEDTRLEVARILCPAGFEIVQAESANGPRH
Ga0242665_101307272	3300022724	Soil	ANRGGVMSIQSEYDAVREAWTHAVLDALQAADEDTRLEVARILCPAGFEIVQAEPANGPR
Ga0209240_10143643	3300026304	Grasslands Soil	MSTRDENDAMKKARTHAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTKAGWKH
Ga0257149_10198633	3300026355	Soil	MSTLDENDAMKKAWTYAVLDAVEAADEDTRLEIARILCPAGFEIVEIEVTREARKH
Ga0257149_10483082	3300026355	Soil	MKKAWTYAVLDAVEAADEDTRLEIARILCPAGFEIVEIEVTRSAWKH
Ga0257163_10047952	3300026359	Soil	MSNPEKNDAIKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTRSAWKH
Ga0257154_10634891	3300026467	Soil	MSNPEKNDAIRKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTRS
Ga0257155_10071843	3300026481	Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEMTRAARKH
Ga0257161_10003931	3300026508	Soil	MLSPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVKTAARKH
Ga0257161_10264341	3300026508	Soil	MSTPDENDAMKKAWTYAVLDAIEAADENTRLEIARILCPAGFEIVEIEVTRAARKH
Ga0257158_10311412	3300026515	Soil	MSNPEKNDAIRKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIAVTRSARKH
Ga0209648_100438008	3300026551	Grasslands Soil	MSTPDENDAMKKAWTYAVLDAVEAADEDTRLEIARILCPAGFEIVEIEVTRLARKH
Ga0179587_100644833	3300026557	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTWLEIARILCPAGFEIVEIKVTKAGWKH
Ga0179587_111945042	3300026557	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEVTRAARKH
Ga0209625_10520102	3300027635	Forest Soil	MLSPDESDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIKATRATAKH
Ga0209076_11700902	3300027643	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIKVTKAGWKH
Ga0209488_100466111	3300027903	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIEVTRAARKRQH
Ga0209488_102082452	3300027903	Vadose Zone Soil	MSNPEKNDAMKKAWTYAVLDAVEAADENTRLDIARILCPAGFEIVEIEMTRAVRKH
Ga0209488_103572422	3300027903	Vadose Zone Soil	MLTPDENDAITKAWTYAVLDAVKAADENTRLEIARLLCPAGFEIVEIEPT
Ga0209488_104689073	3300027903	Vadose Zone Soil	MSTRDENDAMKKAWTYAVLDAVEAADENTRLEIARILCPAGFEIVEIEVTKAARKH
Ga0209488_110236761	3300027903	Vadose Zone Soil	MSTPDENDAMKKAWTYAVLDAIEAADQNTRLEIARILCPAGFEIVEIEVTRAARKH
Ga0209526_100163023	3300028047	Forest Soil	MLTPDESDAMKKAWTYAVLDAVKAADQNTRLEIARILCPAGFEIVEIEPTRAARNH
Ga0209526_102433562	3300028047	Forest Soil	MLTPDESDAVKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIKATRATAKH
Ga0318516_107159151	3300031543	Soil	MSIQSEYDEVTEAWTHAVLDALEAADENTRLELARILCPAGFEIVQAEPTDGPRH
Ga0306917_109979721	3300031719	Soil	MLTADENEAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGTTRAARKH
Ga0307469_100710823	3300031720	Hardwood Forest Soil	MLTPDESEAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIKATRASRKH
Ga0306925_109238983	3300031890	Soil	MLTADENEAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGTTRAARK
Ga0310916_100355445	3300031942	Soil	MSIQSEYDAVTEAWTHAVLDALEAADENTRLELARILCPAGFEIVQAEPTDGPRH
Ga0310916_116241291	3300031942	Soil	MLTADENEAMKKAWTYAVLDAVKAADENTRLEIARILCPAGFEIVEIGATRAARKH
Ga0306922_106308251	3300032001	Soil	MSIQSEYDEVTEAWTHAVLDALEAADENTRLELARILCPAGFEIVQAEPINGPRH
Ga0307471_1011166142	3300032180	Hardwood Forest Soil	MLTPDESDAMKKAWIYAVLNAVKAADENTRLEIARILCPAGFEIVEIQATRAAPKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070359

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences