Metagenome Family F070256

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070256
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	108 residues
Representative Sequence	MIGTVDLVIAGDGSAARAAAVSALQRGQRVLVVLRSGDARQAQRLRRWLRKTAGADSGQLRVMESAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSFDASS
Number of Associated Samples	104
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.11 %
% of genes near scaffold ends (potentially truncated)	39.02 %
% of genes from short scaffolds (< 2000 bps)	83.74 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.179 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (7.317 % of family members)
Environment Ontology (ENVO)	Unclassified (37.398 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.967 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.30% β-sheet: 33.83% Coil/Unstructured: 45.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
c.3.1.2: FAD/NAD(P)-binding domain	d1n4wa1	1n4w	0.78
c.3.1.5: FAD/NAD(P)-binding domain	d1v59a2	1v59	0.77
c.3.1.2: FAD/NAD(P)-binding domain	d1pn0a1	1pn0	0.76
c.3.1.2: FAD/NAD(P)-binding domain	d2f5va1	2f5v	0.76
c.3.1.4: FAD/NAD(P)-binding domain	d1y0pa2	1y0p	0.75

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03150	CCP_MauG	10.57
PF00072	Response_reg	2.44
PF12833	HTH_18	2.44
PF00581	Rhodanese	1.63
PF13115	YtkA	1.63
PF08327	AHSA1	1.63
PF00144	Beta-lactamase	1.63
PF09334	tRNA-synt_1g	0.81
PF03795	YCII	0.81
PF03551	PadR	0.81
PF13376	OmdA	0.81
PF11158	DUF2938	0.81
PF01850	PIN	0.81
PF01578	Cytochrom_C_asm	0.81
PF00296	Bac_luciferase	0.81
PF02517	Rce1-like	0.81
PF02800	Gp_dh_C	0.81
PF13508	Acetyltransf_7	0.81
PF00069	Pkinase	0.81
PF00690	Cation_ATPase_N	0.81
PF12840	HTH_20	0.81
PF08241	Methyltransf_11	0.81
PF01548	DEDD_Tnp_IS110	0.81
PF00202	Aminotran_3	0.81
PF12697	Abhydrolase_6	0.81
PF02781	G6PD_C	0.81
PF01545	Cation_efflux	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	10.57
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.25
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.63
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.63
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.63
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.81
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.81
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.81
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.81
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.81
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.81
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.81
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.18 %
Unclassified	root	N/A	13.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.18 %
Unclassified	root	N/A	13.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.18 %
Unclassified	root	N/A	13.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.63 %
Unclassified	root	N/A	13.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.71 %
Unclassified	root	N/A	13.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.44 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.63 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.71 %
Unclassified	root	N/A	13.82 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.63 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.63 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.81 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.71 %
Unclassified	root	N/A	13.82 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	1.63 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.81 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.71 %
Unclassified	root	N/A	13.82 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	1.63 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.81 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.71 %
Unclassified	root	N/A	13.82 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.63 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.81 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.71 %
Unclassified	root	N/A	13.82 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1.63 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.81 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10910864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300002568\|C688J35102_120576678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300004081\|Ga0063454_100179012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300004081\|Ga0063454_102108262	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300004114\|Ga0062593_100279947	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300004114\|Ga0062593_100397419	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300004156\|Ga0062589_100124338	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300004463\|Ga0063356_103389607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300004463\|Ga0063356_105989911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300004479\|Ga0062595_101056313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300004633\|Ga0066395_10274673	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300004779\|Ga0062380_10460957	Not Available	560	Open in IMG/M
3300004782\|Ga0062382_10107092	Not Available	1130	Open in IMG/M
3300005093\|Ga0062594_100326786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300005093\|Ga0062594_101194350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005093\|Ga0062594_102391479	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005293\|Ga0065715_10706108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	650	Open in IMG/M
3300005332\|Ga0066388_102334144	Not Available	969	Open in IMG/M
3300005333\|Ga0070677_10574897	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005333\|Ga0070677_10664133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005335\|Ga0070666_10178911	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300005339\|Ga0070660_101777747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005345\|Ga0070692_10255982	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005355\|Ga0070671_101569045	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005444\|Ga0070694_100161742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1643	Open in IMG/M
3300005457\|Ga0070662_101766404	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005471\|Ga0070698_100391983	All Organisms → cellular organisms → Bacteria → Proteobacteria	1322	Open in IMG/M
3300005545\|Ga0070695_100520466	Not Available	923	Open in IMG/M
3300005545\|Ga0070695_101763238	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005616\|Ga0068852_100680191	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300005617\|Ga0068859_102862643	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005764\|Ga0066903_100294108	All Organisms → cellular organisms → Bacteria	2561	Open in IMG/M
3300005764\|Ga0066903_107211240	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005844\|Ga0068862_101126696	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005982\|Ga0075156_10045600	All Organisms → cellular organisms → Bacteria → Proteobacteria	2551	Open in IMG/M
3300006237\|Ga0097621_100014297	All Organisms → cellular organisms → Bacteria → Proteobacteria	5936	Open in IMG/M
3300006358\|Ga0068871_100016024	All Organisms → cellular organisms → Bacteria → Proteobacteria	5632	Open in IMG/M
3300006852\|Ga0075433_11432094	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006854\|Ga0075425_100003276	All Organisms → cellular organisms → Bacteria	16429	Open in IMG/M
3300006871\|Ga0075434_101510025	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006894\|Ga0079215_11565540	Not Available	523	Open in IMG/M
3300006914\|Ga0075436_101190301	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300009078\|Ga0105106_10681488	Not Available	735	Open in IMG/M
3300009094\|Ga0111539_11456450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300009101\|Ga0105247_10367206	Not Available	1017	Open in IMG/M
3300009148\|Ga0105243_10248919	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300009156\|Ga0111538_10410021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1716	Open in IMG/M
3300009177\|Ga0105248_10030551	All Organisms → cellular organisms → Bacteria → Proteobacteria	6017	Open in IMG/M
3300009553\|Ga0105249_11124829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300009868\|Ga0130016_10170659	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300010036\|Ga0126305_10142428	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300010037\|Ga0126304_10010218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5082	Open in IMG/M
3300010400\|Ga0134122_11946627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300010401\|Ga0134121_12441669	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010403\|Ga0134123_12633544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012469\|Ga0150984_123417019	Not Available	850	Open in IMG/M
3300012685\|Ga0137397_10174192	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300012915\|Ga0157302_10549948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012918\|Ga0137396_10242238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300012925\|Ga0137419_10039605	All Organisms → cellular organisms → Bacteria → Proteobacteria	2961	Open in IMG/M
3300012925\|Ga0137419_10131588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1782	Open in IMG/M
3300012927\|Ga0137416_10347026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300012927\|Ga0137416_11139359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012985\|Ga0164308_10360080	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300013308\|Ga0157375_13262308	Not Available	541	Open in IMG/M
3300015241\|Ga0137418_10026309	All Organisms → cellular organisms → Bacteria	5376	Open in IMG/M
3300015371\|Ga0132258_10146184	All Organisms → cellular organisms → Bacteria → Proteobacteria	5663	Open in IMG/M
3300015371\|Ga0132258_10262162	All Organisms → cellular organisms → Bacteria	4231	Open in IMG/M
3300015371\|Ga0132258_11344045	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300015374\|Ga0132255_100031032	All Organisms → cellular organisms → Bacteria	6754	Open in IMG/M
3300016445\|Ga0182038_11386602	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300017792\|Ga0163161_10892887	Not Available	752	Open in IMG/M
3300017792\|Ga0163161_11655235	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300018083\|Ga0184628_10006814	All Organisms → cellular organisms → Bacteria	5473	Open in IMG/M
3300018083\|Ga0184628_10334016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300018469\|Ga0190270_10511386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300019362\|Ga0173479_10227194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300019377\|Ga0190264_10081196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300025903\|Ga0207680_10167391	Not Available	1478	Open in IMG/M
3300025903\|Ga0207680_10238602	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300025925\|Ga0207650_11315415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025926\|Ga0207659_11604861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300025934\|Ga0207686_10164455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1558	Open in IMG/M
3300025940\|Ga0207691_10862122	Not Available	759	Open in IMG/M
3300025941\|Ga0207711_11140809	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300025945\|Ga0207679_11629625	Not Available	591	Open in IMG/M
3300026088\|Ga0207641_10497086	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300026089\|Ga0207648_11988116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300026121\|Ga0207683_10360140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1336	Open in IMG/M
3300026121\|Ga0207683_11437325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027794\|Ga0209480_10027941	All Organisms → cellular organisms → Bacteria → Proteobacteria	2838	Open in IMG/M
3300027831\|Ga0209797_10362089	Not Available	595	Open in IMG/M
3300027840\|Ga0209683_10065412	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300027870\|Ga0209023_10008089	All Organisms → cellular organisms → Bacteria	10629	Open in IMG/M
3300027874\|Ga0209465_10373795	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300028536\|Ga0137415_10209147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1768	Open in IMG/M
3300028648\|Ga0268299_1000464	All Organisms → cellular organisms → Bacteria	124777	Open in IMG/M
3300028803\|Ga0307281_10301276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300028803\|Ga0307281_10332745	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031548\|Ga0307408_101224143	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031549\|Ga0318571_10287336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031679\|Ga0318561_10420292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300031747\|Ga0318502_10261226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300031854\|Ga0310904_10133147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	1421	Open in IMG/M
3300031901\|Ga0307406_11519142	Not Available	590	Open in IMG/M
3300031903\|Ga0307407_10691956	Not Available	767	Open in IMG/M
3300031913\|Ga0310891_10086704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300031938\|Ga0308175_100062421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3280	Open in IMG/M
3300031938\|Ga0308175_100821306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300031939\|Ga0308174_11966231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031996\|Ga0308176_10326227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1506	Open in IMG/M
3300031996\|Ga0308176_11966968	Not Available	624	Open in IMG/M
3300032004\|Ga0307414_11544842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300032009\|Ga0318563_10661963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300032012\|Ga0310902_10489566	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300032013\|Ga0310906_10030465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2452	Open in IMG/M
3300032067\|Ga0318524_10155557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300032126\|Ga0307415_101015219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300033433\|Ga0326726_10294159	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300033475\|Ga0310811_10807131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300034268\|Ga0372943_1173043	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300034817\|Ga0373948_0000447	All Organisms → cellular organisms → Bacteria	5129	Open in IMG/M
3300034819\|Ga0373958_0003087	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2381	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.28%
Host-Associated	Host-Associated	41.46%
Engineered	Engineered	3.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.78%
Plants	Host-Associated → Plants	41.46%
Aquatic	Environmental → Aquatic	6.50%
Wastewater	Engineered → Wastewater	3.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.01%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Sediment	Environmental → Aquatic → Sediment	1.63%
Roots	Host-Associated → Plants → Roots	1.63%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.63%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.63%
Peat	Environmental → Terrestrial → Peat	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.20%
Loam	Environmental → Terrestrial → Soil → Loam	11.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.63%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.63%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.63%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.63%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.06%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.63%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.63%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.63%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.81%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.81%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005982	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNA	Engineered	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027794	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA (SPAdes)	Engineered	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028648	Activated sludge microbial communities from bioreactor in Nijmegen, Gelderland, Netherland - NOB reactor	Engineered	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_109108642	3300001686	Soil	MIGNVDLVVAGDGSAARAAALRALQHGQHVLVVLRSADAREARRLRRSLLETAXAEDGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNASAFASFP*
C688J35102_1205766783	3300002568	Soil	MIGNVDLVVAGDGSAARAAALRALQHGQHVLVVLRSADAREARRLRRSLLETAGAEDGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNASAFASFP*
Ga0063454_1001790121	3300004081	Soil	EPHAMIGNVDLVVAGDGSAARAAALRALQHGQHVLVVLRSADAREARRLRRSLLETAGAEDGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNASAFASFP*
Ga0063454_1021082621	3300004081	Soil	MTRTVDVVIAGDGRDARAAAVSALQRGHRVLLVLRSADTRVARRLRRSVLESAGPGTGQLEVMVCAEVVCADGVDGVEAVVLRHAATGRVSAVNAS
Ga0062593_1002799472	3300004114	Soil	VIGTVDLVIAGDGGAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLSCDTQKQGV*
Ga0062593_1003974192	3300004114	Soil	MIGTVDLVIAGDGDAACTAVIDALQRGQRVLVALRSADTGAARRLRRSLVRSARVDRKQLTVMTSAEIVCVDGVDGVEAVVLRHATTGRLSAVNASAVVSGNH*
Ga0062589_1001243383	3300004156	Soil	VIGTVDLVIAGDGCAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLSCDTQKQGV*
Ga0063356_1033896071	3300004463	Arabidopsis Thaliana Rhizosphere	MNGTVDLVITGAGGAVRAAAVSALRRGQRILVVLRSADARAARRLRRTLRRTIGAGCGQLRVLTSAEVVCVDGVDGVEAVVIRHAPTGHLSALNASAFFCCDAEKDAAT*
Ga0063356_1059899111	3300004463	Arabidopsis Thaliana Rhizosphere	MIGTVDLVVAGTASAARAPAISALRRGQRVLVVLGSADARVARRLRRILLRIADADGGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNASAFLSCDGDHRA*
Ga0062595_1010563132	3300004479	Soil	MIGTVDLVIAGDGSAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLRRTAGADCGQLRVMTSAEVVCVDGVDGVEAVVVRHAAT
Ga0066395_102746732	3300004633	Tropical Forest Soil	MTGTVDLVITGDGSAARAAAISALQNGQRVLVVLRSADERVARRFRRGVRNAAGADSGQLRVIGSADVVCVDGVDAVEAVVVRHARTGRLSAVNASVFVSFDD
Ga0062380_104609571	3300004779	Wetland Sediment	MTRTVDLVVSGDGRAARAAAVEALRCGGRVLIVLRSCDARQPQRLRRWLRKTAGADSGQLKMMAGAEVVCVDGVDAVEAVVVRHALTGRLSAVNASAFVSFDASSSSRRRLSRNENESRSRTPAAGEDGIDG
Ga0062382_101070922	3300004782	Wetland Sediment	MTRTVDLVVSGDGRAARAAAVEALRCGGRVLIVLRSCDARQPQRLRRWLRKTAGADSGQLKMMAGAEVVCVDGVDAVEAVVVRHALTGRLSAVNASAFVSFDASSSSRRRLSRNENESRSRTPAAGEDGIDGRHERH*
Ga0062594_1003267862	3300005093	Soil	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSFDRSSQSPRRRRMEANEPRSV*
Ga0062594_1011943501	3300005093	Soil	MIGTVDLVIAGDGSDARAVALSALQRGQRVLVVVRSADAGAARRFRRSLLDTAGADEGQLRVMTNAEVVCADGIDGVEAVVVRHAPTGRLSAVNASAFLSCGA*
Ga0062594_1023914792	3300005093	Soil	VIRTVDLVVSGDDEPAGAAAAVEVLRRGGRVLVVLRSGERRQARRLRRCLQRTAGADPGQLSVLAGAEVVCVDGVDMVEA
Ga0065715_107061082	3300005293	Miscanthus Rhizosphere	MIGMVDVVIAGNGSAVRAAAVSALERGQRVLVVLRSADARAARRFRRSLLDAAGAHGGQLRVMTRAEVVCADGIGGVEAVVVRHVPTGHLSAVNASAFLSYGAQKE*
Ga0066388_1023341442	3300005332	Tropical Forest Soil	MIRTVDLVIAGDGSAARAAAVEALQCGHRVLLVVRSADTRVARRLRRHLLGTATTCGGQLWVMTGGEVVCVDGVGAVEAVVLRHARTGRLSAVNASAFVSFDASSQSRRPLSTHEKKTRSI*
Ga0070677_105748972	3300005333	Miscanthus Rhizosphere	MIGTVDLVIAAPASAAHPAAVAALQGGQRVLVVLRSADARVAQRLRRSLLETAGVDGGQLSVMTSAEVVCADGVDGVEAVVIRHDRTGRVSAVNTSAFVSFDASSQSRYPRPQQRKRTALRSGAR*
Ga0070677_106641331	3300005333	Miscanthus Rhizosphere	MIGTVDLVIAGDGSDARAAALSALQRGQRVLVVLHCADPRVARRLRRSLLNNAGADGGQLMVMTSAEVVCADGVDGVEAVVIRHAPTGRLSAVTASAYLSGDGQKNENDARPD*
Ga0070666_101789112	3300005335	Switchgrass Rhizosphere	MIRTVDLVIAGDGYAARAAAVSALQRGHRVLVVLRSADTRGARRLRRNVLNCAGADGGQLRVTIRAEVVCADGVDGVEAVVIRHAPTGRLSAVNASAFVSFDASPQPPT*
Ga0070660_1017777472	3300005339	Corn Rhizosphere	MNGTVDLVIAGDGGPVRAAAVSALRRGQRVLVVLRSADARAARRLRRILRRTPGAGCGQLRVLTSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLCCDAQKE*
Ga0070692_102559822	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTRNVDLVISGDGTAARAAAVDVLRRGGRVLIVLRSGNTRRAQRLRSGLRKTPGAGAGQVRVMASAEVVCVGGVDAVEAVVVRHTPTGRLSAVNASAFLTFDASS*
Ga0070671_1015690451	3300005355	Switchgrass Rhizosphere	SRCRQRTCCETHAMIGMVDVVIAGNGSAVRAASVSALERGQRVLVVLRSADARAARRFRRSLLDAAGAHAGQLRVMTRAEVVCADGIGGVEAVVVRHVPTGHLSAVNASAFLSYGAQKE*
Ga0070694_1001617422	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIGTVDLVVAGTASAARAPAISALRRGQRVLVVLGSADARVARRLRRILLRIADAGGGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNASAFLSCDGDHRRPRLVTR*
Ga0070662_1017664042	3300005457	Corn Rhizosphere	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFV
Ga0070698_1003919833	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIGTVDVVIAGDCSAARAAAVSALERGQRVLVVLRAADARAARRLRRTLLRTADADGSQLHVMTSAEVVCADGVGGVEAVVVRHAPTGHLSA
Ga0070695_1005204661	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIGTVDLVVAGTASAARAPAISALRRGQRVLVVLGSADARVARRLRRILLRIADAGGGQLRVITSAEVVCVDGVDGVEAVVVRHAPTGRLSAVNA
Ga0070695_1017632381	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRL
Ga0068852_1006801911	3300005616	Corn Rhizosphere	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSFDRSSQSPRPRRMEANEP
Ga0068859_1028626431	3300005617	Switchgrass Rhizosphere	MIATVDLVIAGNASASRAAAVGDLRRGERVLVVLRSSDARVARRLRRSVLETAGADGGQLRVMTSAEVVCADGVDGVEAVVVRHAPT
Ga0066903_1002941082	3300005764	Tropical Forest Soil	MIETVDVVIAGDGSGGRTAAVSALERGQRVLIVLRTDVRVARRLRSTLLRTVRAGCGQLRIMTSAEVVCVDGVDGVEAVVVRHTPTGHLSAVNASAFVSFDDSSRSRRPRSRNEDEPRSV
Ga0066903_1072112401	3300005764	Tropical Forest Soil	MTGTVDLVITGDGSAARAAAISALQNGQRVLVVLRSADERVARRFRRGVRNAAGADSGQLRVIGSADVVCVDGVDAVEAVVVRHARTGRL
Ga0068862_1011266962	3300005844	Switchgrass Rhizosphere	MTRTVDLVISGDGRAARVAAVDALRCGGRVLIVLRSGDARQVQRLRRCLRKTAGTDSGQLRVMASAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVAFDGSLRSRRSRSRNENEPRSV*
Ga0075156_100456002	3300005982	Wastewater Effluent	MTRTVDLVISGGGPAASGIAVDALRRGRRVLIVLRSSDARRARQLRRWIQRTAGQDSGRLRVMTGAEVVCVDGVDAVEAIVVRQTGTGLLTAVNASAFVSCDDSS*
Ga0097621_1000142977	3300006237	Miscanthus Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRCGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALESTT*
Ga0068871_1000160243	3300006358	Miscanthus Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRCGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMRSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALESTT*
Ga0075433_114320942	3300006852	Populus Rhizosphere	MNGTVDLVIAGDGGAVRAAAVSALQRGQRVLVVLRSADARAPRRLRRTLRRTMGAACGQLRVLTRAEVVCVDGVDGVEAVVVRHAPTGHLSAV
Ga0075425_10000327619	3300006854	Populus Rhizosphere	MNQTVDLVIAGDHSAARAAAVAALRCGQSVLVVLWVDDARRGRRLRRSLLEDARTDGGQLKVITGAEVVCVDGVEGVEAVVVRHAATGRLSAVNTSAFASFDG*
Ga0075434_1015100251	3300006871	Populus Rhizosphere	MNGTVDLVIAGDGGAVRAAAVSALQRGQRVLVVLRSADARAPRRLRRTLRRTMGAACGQLRVLTRAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLCCDAQKE*
Ga0079215_115655402	3300006894	Agricultural Soil	MNGTVDLVIAGDGNAPRAAAVSALRRGQRVLVVLGSADVRVARRLRRILLRTADADGGQLRVITSGLVVCVDGVTGVEAVVIRHAATGRLSAVNAAAFISCDGQKNE*
Ga0075436_1011903012	3300006914	Populus Rhizosphere	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSF
Ga0105106_106814881	3300009078	Freshwater Sediment	MNGTVDLVIAGDGNAARAAAVSALRRGQRVLVVLGSADVRVARRLRRTLLRTADADGYQLRVITSAQVVCVDGVAGVEAVVIRQAATGRLSAVNASAFISCDGQKNEHDARPD*
Ga0111539_114564501	3300009094	Populus Rhizosphere	MIGTVDLVIAGDTSAARAAAVSALRRGQRVLVVLRSANARAARRLRRRLLETAGADGGQLRVMTRAEVVCADGVEGVEAVVIRHAPTGRL
Ga0105247_103672062	3300009101	Switchgrass Rhizosphere	VIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGGQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSFDRSSQSPRRRRMEANEPRSA*
Ga0105243_102489192	3300009148	Miscanthus Rhizosphere	MTRTVDLVISGDGRAARVAAVDALRCGGRVLIVLRSGDARQVQRLRRCLRKTAGTDSGQLRVMASAEVVCVDGVDAVEAVVVRHAPTGRLSAVNAAAFAAFDGSLRSRRPRSRNENEPRSV*
Ga0111538_104100214	3300009156	Populus Rhizosphere	MMRTVDLVIAGDGGAARVAASGALRRGQRVLVVLRSADARVAQRLRRSLLETAGVDGGQLSVMTSAEVVCADGVDGVEAVVIRHDRTGRVSAVNTSAFVSFDASS
Ga0105248_100305513	3300009177	Switchgrass Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRWGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMRSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALESTT*
Ga0105249_111248291	3300009553	Switchgrass Rhizosphere	VIGMVDLVIAGDGCAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLSCDTQKQGV*
Ga0130016_101706593	3300009868	Wastewater	MNWTVDLVIAGDGNAARAAAVSALRRGQRVLLVLGSAEVRVARRLRRILRGTADANGCQLHVVTNAEVVCVDGISAVEAVVIRHAATGRLSAVNASASISCDGQTNEYDARRD*
Ga0126305_101424282	3300010036	Serpentine Soil	MIGTTVDLVIAGDGSDARASALSALQRGQRVLVVLRSADARAARRFRRSLLDSAGADEGQLRVMTSAEVVCADGIDGVEAVVVRHAATGRLSAVNASAFLSCD*
Ga0126304_100102185	3300010037	Serpentine Soil	MIRTVDLVVAGDGSAARGAAAGALRRGDRVLVVLRSADRRVARRMRKWLRSVAPADAGQLTVMRNADVVCVDGVDGVEAVVLRHAQTGRLSAVNASAFVPFEESLGDQVRAATTRS*
Ga0134122_119466272	3300010400	Terrestrial Soil	MIWTVDLVTAGDGSAARAAAVGALQRGQRVLVVLRSADARVARRLRRTLLRNAGTDRGQLRVMTSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFVSFDASSQSRRRVLRSPRRFGYVL*
Ga0134121_124416691	3300010401	Terrestrial Soil	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSCSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSFDRSSQSPR
Ga0134123_126335441	3300010403	Terrestrial Soil	MIWTVDLVTAGDGSAARAAAVSALQRGQRVLVVLRSADARVARRLRRTLLRNAGTDRGQLRVMTSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFVSFDASSQSRRRVLRSPRRFGYVL*
Ga0150984_1234170192	3300012469	Avena Fatua Rhizosphere	MIGTVDLVIAGKGRAVCAAAASALQGGQRVLVVLRSADSRAAGRLRRTLRKTMGAGSGQLTIITSAEVVCVDGVDAVEAVVVRHVPTGHLSAVNTSAFLSCDAQ*
Ga0137397_101741922	3300012685	Vadose Zone Soil	MIGTVDLVIAGDGSAVRAAAVSALQRGQRVLVVLRSADARAARRLRRTLRTTMGAGCGQLRVITSAEVVCVDGVDGVEAVIVRHTPTGHLSAVNASAFLSCDAQKQ*
Ga0157302_105499481	3300012915	Soil	SAVRAAAARALQRGQRVLVVSRSADARAARRLRRTLRKTLVAGCGQLRVITSAEVVCVDGIDGVEAVVVRHVPTGHLSAVNASAFLSCDAQKQ*
Ga0137396_102422382	3300012918	Vadose Zone Soil	MIGTVDLVIAGNRSAARAPAISALERGQRVLVVLRSADGRAARRFRRSLLDTAGADGGQLRVMTSAEVVCADGIDGVEAVVVRHAPTGRLSAVNASAFFSCDGQKKEFDARPD*
Ga0137419_100396052	3300012925	Vadose Zone Soil	MIATVDLVIAGNRSAARAPAISALERGQRVLVVLRSADGRAARRFRRSLLDTAGADGGQLRVMTSAEVVCADGIDGVEAVVVRHAPTGRLSAVNASAFFSCDGQKKVWFANTLIAGLAD*
Ga0137419_101315881	3300012925	Vadose Zone Soil	MIGTVDLVIAGDGSAVRAAAVSALQRGQRVLVVLRSADARAARRLRRTLRATMGAGCGQLTVVTSAEVVCVDGVDGVEAVVVRHALTGHLSAVNASAFLSCDAQKQ*
Ga0137416_103470262	3300012927	Vadose Zone Soil	MIGTVDLVIAGDGSAVRAAAVSALQRGQRVLVVLRSADARAARRLRRTLRATMGAGCGQLRVVTSAEVVCVDGVDGVEAVIVRHAPTGQLSAVNASAFLSCDAQKQ*
Ga0137416_111393591	3300012927	Vadose Zone Soil	TYSEAHAMIGTVDLVIAGNRSAARAPAISALERGQRVLVVLRSADGRAARRFRRSLLDTAGADGGQLRVMTSAEVVCADGIDGVEAVIVRHAPTGQLSAVNASAFLWCDAQKQ*
Ga0164308_103600802	3300012985	Soil	VIGTVDVVIAGDGGTARRVAVRALQRGDRVLIVLRSVDARIARRLRTSLLETAGADRDQLRVMAGAEVVCADGIDGVEAVVVRHAPSGRLSAVNASAFVSFTPQ
Ga0157375_132623082	3300013308	Miscanthus Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRCGGRVLIVLRSGDARQAQRLRRFLRKTAGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAQ
Ga0137418_100263093	3300015241	Vadose Zone Soil	MIATVDLVIAGNRSAARAPAISALERGQRVLVVLRSADGRAARRFRRSLLDTAGADGGQLRVMTSAEVVCADGIDGVEAVVVRHALTGHLSAVNASAFLSCDAQKQ*
Ga0132258_101461843	3300015371	Arabidopsis Rhizosphere	MRTVDLVIAGDGNAARVAAAGALRRGQRVLVVLRSADARVARRLRKCFRTTAQTNVGQLIVMTNAEVVCVDGVDAVEAVVVRHVRTGRVSAVNASAFASFDA*
Ga0132258_102621624	3300015371	Arabidopsis Rhizosphere	MIRTVDVVLAGDGGVARAVAADALQRGRSVLIVLGSVDPRAGRRLRRCLRKVAGANVSRLQVMTGGEVVCVDGVDAVEAVVVRHARTGRLSAVNASSFVSFDVSSQSRRAAVRFANQR*
Ga0132258_113440454	3300015371	Arabidopsis Rhizosphere	VIGTVDLVIAGDGGAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLRIFTSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNAS
Ga0132255_1000310326	3300015374	Arabidopsis Rhizosphere	MIATVDLVIAGNASASRAAAVGALRRGERVLVVLRSSDARVARRLRRSVLETAGADGGQLRVMMSAEVVCADGVDGVEAVVVRHAPTGRLSAVNASAFVSFDASSQSRRPRMYHRGHGPGGP*
Ga0182038_113866023	3300016445	Soil	MIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTGGEVVCVDGVDAVEAVVLRHARTGRLS
Ga0163161_108928871	3300017792	Switchgrass Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRSGGRVLIVLRSGDARQARRLQRCLRKTGGAASGQLTVMASAEVVCVDGVDAVEAVVVRHAPTGRLSGVNASAFVSFEAES
Ga0163161_116552351	3300017792	Switchgrass Rhizosphere	MIATVDLVIAGDGSAVRAAAARALQRGQRVLVVSRSADARAARRLRRTLRKTLVAGCGQLRVITSAEVVCVDGIDGVEAVVVRHVPTGHLSAVNASAF
Ga0184628_100068142	3300018083	Groundwater Sediment	MIRTVDLVIAGDGSAAGLAAVSALQRGQRVLVVLRSADARVARRLRRSLLETADADGGQLRVMTRAEVVCVDGLDAVEAVIVRHARTGRLSAVNASAFVSFDGSSQSQGAPSTNEPRA
Ga0184628_103340161	3300018083	Groundwater Sediment	MIATVDLVIAGDGSAVRAAAARALQRGQRVLVVLRSVDARAARRLRRTLRKTLRAGCGQLRVITSAEVVCVDGVEGVEAVVVRHVPTGHLSAVNASAFLSCDAQKQ
Ga0190270_105113862	3300018469	Soil	MIGTVDLVIAGNRSAARAPVISALERGQRVLVVLRSADARAARRFRRRLLDAAGADGGQLRVMTRAEVVCADGIDGVEAVVVRHAPTGRLSAVNTSAFLSCDGQKNEYDARPD
Ga0173479_102271942	3300019362	Soil	MIATVDLVIAGDGSAVRAAAARALQRGQRVLVVSRSADARAARRLRRTLRKTLVAGCGQLRVITSAEVVCVDGIDGVEAVVVRHVPTGHLSAVNASAFLSCDAQKQ
Ga0190264_100811961	3300019377	Soil	MIGTVDLVIAGNRSAARAPAISALERGQRVLVVLRSADARAARRFRRSLLDAAGADGGQLRVMTRAEVVCADGIDGVEAVVVRHAPTGRLSAVNASAFLSCDGQKNEYDARPD
Ga0207680_101673911	3300025903	Switchgrass Rhizosphere	MIRTVDLVIAGDGPAARAAAVSALRSGRRVLVVLGSSNARIARRLRRCLCKPSRSDGSQLTVMTDAAVVCVDGVDAVEAVVVRHARTGRLSAVNASAFVSFDRSSQSPRRRRMEANEPRS
Ga0207680_102386022	3300025903	Switchgrass Rhizosphere	MIRTVDLVIAGDGYAARAAAVSALQRGHRVLVVLRSADTRGARRLRRNVLNCAGADGGQLRVTIRAEVVCADGVDGVEAVVIRHAPTGRLSAVNASAFVSFDASPQPPT
Ga0207650_113154152	3300025925	Switchgrass Rhizosphere	MIGMVDLVIAGNGSAVRAAAVSALERGQRVLVVLRSADARAARRFRRSLLDAAGAHGGQLRVMTRAEVVCADGIGGVEAVVVRHVPTGHLSAVNASAFLSYGAQKE
Ga0207659_116048611	3300025926	Miscanthus Rhizosphere	MIGTVDLVIAAPASAAHPAAVAALQGGQRVLVVLRSADARVAQRLRRSLLETAGVDGGQLSVMTSAEVVCADGVDGVEAVVIRHDRTGRVSAVNTSAFVSFDASSQSRYP
Ga0207686_101644551	3300025934	Miscanthus Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRWGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALESTT
Ga0207691_108621221	3300025940	Miscanthus Rhizosphere	AARAAAVDALRCGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALESTT
Ga0207711_111408091	3300025941	Switchgrass Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRWGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSAALEST
Ga0207679_116296251	3300025945	Corn Rhizosphere	MIATVDLVIAGNASASRAAAVGALRRGERVLVVLRSSDARVARRLRRSVLETAGADGGQLRVIIRAKVVCADGVDGVEAVVVRHAPTGRLSAINTSEFVSFDDSSQSRRPV
Ga0207641_104970861	3300026088	Switchgrass Rhizosphere	MTRTVDLVISGDGRAARAAAVDALRCGGRVLIVLRSGDARQAQRLRSCLRKTPGADSGQLRVMRSAEVVCVDGVNAVEAVVVRHAPTGRLSAVNASAFVSA
Ga0207648_119881162	3300026089	Miscanthus Rhizosphere	MIGTVDLVVAGTASAARAPAISALRRGQRVLVVLGSADARVARRLRRILLRIADAGGGQLRVITSAEVVCVDGVDGVEAVVVRHALTGHLSAVNASAFLLCDAQKERL
Ga0207683_103601402	3300026121	Miscanthus Rhizosphere	MIGMVDVVIAGNGSAVRAAAVSALERGQRVLVVLRSADARAARRFRRSLLDAAGAHGGQLRVMTRAEVVCADGIGGVEAVVVRHVPTGHLSAVNASAFLSYGAQKE
Ga0207683_114373251	3300026121	Miscanthus Rhizosphere	VIGTVDLVIAGDGGAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLLCDAQKE
Ga0209480_100279413	3300027794	Wastewater Effluent	MTRTVDLVISGGGPAASGIAVDALRRGRRVLIVLRSSDARRARQLRRWIQRTAGQDSGRLRVMTGAEVVCVDGVDAVEAIVVRQTGTGLLTAVNASAFVSCDDSS
Ga0209797_103620891	3300027831	Wetland Sediment	MTRTVDLVVSGDGRAARAAAVEALRCGGRVLIVLRSCDARQPQRLRRWLRKTAGADSGQLKMMAGAEVVCVDGVDAVEAVVVRHALTGRLSAVNASAFVSFDASSSSRRRLSRNENESRSRTPAAGEDGIDGRHER
Ga0209683_100654121	3300027840	Wetland Sediment	MTRTVDLVVSGDGRAARAAAVEALRCGGRVLIVLRSCDARQPQRLRRWLRKTAGADSGQLKMMAGAEVVCVDGVDAVEAVVVRHALTGRLSAVNASAFVSFDASSSSRRRLSRNENESRSRTPAAGEDGIDGRHERH
Ga0209023_100080893	3300027870	Freshwater And Sediment	VIGTVDLVIEEDTTATRAAAVGALQRGQRVLVVLQSTDRRVARRLRRRLLASSGADRARLRIMTGAEVVCADGLNTLEAVVVRRMLTGRLSAVNAAALVSFDAPSPPRRQTTE
Ga0209465_103737952	3300027874	Tropical Forest Soil	MTGTVDLVITGDGSAARAAAISALQNGQRVLVVLRSADERVARRFRRGVRNAAGADSGQLRVIGSADVVCVDGVDAVEAVVVRHARTGRLSAVNASVFVSFDDASPRRH
Ga0137415_102091472	3300028536	Vadose Zone Soil	MIGTVDLVIAGDGSAVRAAAVSALQRGQRVLVVLRSADARAARRLRRTLRATMGAGCGQLTVVTSAEVVCVDGVDGVEAVIVRHAPTGQLSAVNASAFLSCDAQKQ
Ga0268299_1000464112	3300028648	Activated Sludge	VIGTVDLVIAGGGDAARAAAVGALQRGQRVLLVLGSADVRVARRLRRILLRTPGADGCQLRVITSGLVVCVDGVAGVEAVVIRHAPTGRLSAVNACAFISCDGQRSEYDARRD
Ga0307281_103012761	3300028803	Soil	MIATVDLVIAGDGSAVRSAAVSALQRGQRVLVVLRSADARAARRLRRTLRKTLVAGCGQLRVITSAEVVCVDGIDGVEAVVVRHVPTGHLSAVNASAFLSCDAQKQ
Ga0307281_103327451	3300028803	Soil	MTRTVDLVISGDGRAARAAAVDALRCGGRVLIVLRSGDARQAQRLRRCLRKTAGADSGQLRVMTSAEVVCVDGVDAVEAVVVRHAPTGRLSA
Ga0307408_1012241431	3300031548	Rhizosphere	MNGTVDLVIAGDGNAARAAAVSALRRGQRVLVVLGSADVRVARRLRRILVRTADADGGQLRVITSGLVVCVDGVTGVEVVVIRHAATGRLSAVNASAFISSDGQKNEYEARPD
Ga0318571_102873361	3300031549	Soil	RLPGLAVRTRSRSTWICDPMIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTCGEVVCVDGVDAVEAVVLRHARTGRLSAVNASAFVSFDACFQSCRALSTHEKEPRSV
Ga0318561_104202921	3300031679	Soil	RSTWICDPMIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTGGEVVCVDGVDAVEAVVLRHARTGRLSAVNASAFVSFDACFQSCRALSTHEKEPRSV
Ga0318502_102612262	3300031747	Soil	MIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTGGEVVCVDGVDAVEAVVLRHARTGRLSAVNASAFVSFDACFQSCRALSTHEKEPRS
Ga0310904_101331472	3300031854	Soil	VIGTVDLVIAGDGSAAWAAAVSALQRGERVLVVLRSADARVARRLRRRALETAGVRAGQLRVMTSAEVVCADGVAGVEAVVVRHLQTG
Ga0307406_115191422	3300031901	Rhizosphere	MNGTVDLVIAGDGNAPRAAAVGALRRGQRVLVVLGSADVRVARRLRRILVRTADADGGQLRVITSGLVVCVDGVTGVEAVVIRHAATGRLSAVNASAFISCDGQKNEYDARPD
Ga0307407_106919561	3300031903	Rhizosphere	MNGTVDLVIAGDASASRAVAIGALQRGQRVLVVLRSADARVARRLRLSLLKTADADSGQLTVMTSAEVVCADGVDGVEAVVIRHASTGRLSAVNASGLFSCDGQSN
Ga0310891_100867043	3300031913	Soil	VIGTVDLVIAGDGGAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLSCDTQKQGV
Ga0308175_1000624212	3300031938	Soil	MIGTVDVVIAGDGAVARAAAVGALERGQRVLVVLRSGEARVARRLRRLLLRTAGTGGGQLSVMTATEVVCVDGVNGVEAVLVRRVATGHLSAVNASAFLSCDGENN
Ga0308175_1008213061	3300031938	Soil	RLHRTCSRTALAMIRTVDLVIAGDVSASDAAAIGSLRRGLRVLVVLRSADARAARRLRRILLHTAGAGGGQLAIMTNAEVVCADGVDGVEAVVVRHTLTGRLSAVNASAFVRAA
Ga0308174_119662311	3300031939	Soil	IAGDGAVARAAAVGALERGQRVLVVLRSGEARVARRLRRLLLRTAGTGGGQLSVMTATEVVCVDGVNGVEAVLVRRVATGHLSAVNASAFLSCDGENN
Ga0308176_103262272	3300031996	Soil	MIATVDLVVEGNDGDVRAAALSALQRGQRVLVVLRSADERAARRLRRTLRTAVGTGSDRLRVITSATVVCVDGVDGVEAVVVRHATTGRLSAVNASAFLSSDTLKRQERWPLSGQR
Ga0308176_119669681	3300031996	Soil	MTRTVDLVISGDGPEARAAAVDALRRGRRVLIVVRSGDARQAQRLRKCLRKTAGTNSGQLTVMASAEVVCVDGVDSVEAVVVRHGPTGRLSAMNASAFVSFERSPQP
Ga0307414_115448421	3300032004	Rhizosphere	RTALAMNATVDLVVAGDASPSRAAAIEALRRGQRVLIVLQSADARMARRLRRSLRIAGGGGGQLTVATAAEVVCVDGVDGVEAVVVRRRRTGRLWAVNAFRFVPCGG
Ga0318563_106619631	3300032009	Soil	DPMIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTGGEVVCVDGVDAVEAVVLRHARTGRLSAVNASAFVSFDACFQSCRALSTHEKEPRSV
Ga0310902_104895662	3300032012	Soil	MTRTVDLVISGDGPAARAAAVDALRCGGRVLMVLRSGDARQAQRLRSCLRKTAGADSGQLRVMASAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSFDTQSLSRRSRSRRDNKAGA
Ga0310906_100304654	3300032013	Soil	VIGTVDLVIAGDGCAARAAAVSALQRGQRVLVVLRSADARAARRLRRTLVKTMGTGCGQLGIITSAEVVCVDGVDGVEAVVVRHAPTGHLSAVNASAFLSCDTQKQGV
Ga0318524_101555573	3300032067	Soil	CDPMIRTVDLVIAGDGSAARAAVVDALQRGRRVLLVLRPADTRVARRLRRSLLNAAAPDGGQLWVMTGGEVVCVDGVDAVEAVVLRHARTGRLSAVNASAFVSFDACFQSCRALSTHEKEPRSV
Ga0307415_1010152192	3300032126	Rhizosphere	MIGTVDVVIAGDSSVARAAAVGALERGQRVLVVLRSGDARVARRLRRTLLRTAGADGRQLSVMTGAEVVCVDGVNGVEAVVIRHAPTGHLSAVNASAFLSCDLEQ
Ga0326726_102941592	3300033433	Peat Soil	MIGTVDLVIAGDGSAARAAAVSALQRGQRVLVVLRSGDARQAQRLRRWLRKTAGADSGQLRVMESAEVVCVDGVDAVEAVVVRHAPTGRLSAVNASAFVSFDASS
Ga0310811_108071313	3300033475	Soil	MKRSHRTVDLVVTGDGGAALAAVVTAVGRGQRVLVVLRAADTRATRRFRRCLRRGVKAADGQLAVMTNAEVVCVDGVHGVEAVVVRHAPTGRLSAVNASAFLSFDGRDELSGA
Ga0372943_1173043_1_234	3300034268	Soil	MIAGDGSAARAAAVAALQRGNLVLIVLRSADARVARRVRQSVRKAARTDAGQLTVITDADVVCVDGVDGVEAVVVRHA
Ga0373948_0000447_60_383	3300034817	Rhizosphere Soil	MIGTVDLVIAGDGSAARAAAVSALERGQRVLVVLRATDARVARRLRRSLFETTGADGGQLRVMTSAEVVCVDGVDRVEAVVVRHAPTGRLSAVNASAFVSFDASSQS
Ga0373958_0003087_2063_2380	3300034819	Rhizosphere Soil	GTVDLVIAGDGSAARAAAVSALERGQRVLVVLRATDARVARRLRRSLFETTGADGGQLRVMTSAEVVCVDGVDRVEAVVVRHAPTGRLSAVNASAFVSFDASSQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences