Metagenome / Metatranscriptome Family F070236

Basic Information
Family ID	F070236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	42 residues
Representative Sequence	VVRAWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL
Number of Associated Samples	112
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	98.37 %
% of genes from short scaffolds (< 2000 bps)	87.80 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (52.033 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.195 % of family members)
Environment Ontology (ENVO)	Unclassified (21.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.033 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF13620	CarboxypepD_reg	6.50
PF05015	HigB-like_toxin	0.81
PF13088	BNR_2	0.81
PF03729	DUF308	0.81
PF01435	Peptidase_M48	0.81
PF13202	EF-hand_5	0.81
PF12867	DinB_2	0.81
PF03918	CcmH	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.81
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.03 %
Unclassified	root	N/A	47.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.03 %
Unclassified	root	N/A	47.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.03 %
Unclassified	root	N/A	47.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.59 %
Unclassified	root	N/A	47.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	48.78 %
Unclassified	root	N/A	47.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	48.78 %
Unclassified	root	N/A	47.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	48.78 %
Unclassified	root	N/A	47.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.97 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.63 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.63 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.63 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.81 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GJ87FRN02FWOZ2	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	505	Open in IMG/M
3300001087\|JGI12677J13195_1014002	Not Available	552	Open in IMG/M
3300001356\|JGI12269J14319_10174951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	878	Open in IMG/M
3300001546\|JGI12659J15293_10066216	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	802	Open in IMG/M
3300001593\|JGI12635J15846_10096916	Not Available	2123	Open in IMG/M
3300002245\|JGIcombinedJ26739_100520407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1067	Open in IMG/M
3300002245\|JGIcombinedJ26739_101220478	Not Available	641	Open in IMG/M
3300002910\|JGI25615J43890_1070140	Not Available	602	Open in IMG/M
3300004092\|Ga0062389_102227707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	721	Open in IMG/M
3300004635\|Ga0062388_100515109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1074	Open in IMG/M
3300005176\|Ga0066679_10594276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	722	Open in IMG/M
3300005467\|Ga0070706_100380267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1315	Open in IMG/M
3300005471\|Ga0070698_100970898	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005541\|Ga0070733_10076576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2113	Open in IMG/M
3300005541\|Ga0070733_10174382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1402	Open in IMG/M
3300005542\|Ga0070732_10754790	Not Available	593	Open in IMG/M
3300005610\|Ga0070763_10057330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1869	Open in IMG/M
3300005610\|Ga0070763_10964622	Not Available	509	Open in IMG/M
3300006028\|Ga0070717_10142681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2067	Open in IMG/M
3300006052\|Ga0075029_100575684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	750	Open in IMG/M
3300006052\|Ga0075029_101307777	Not Available	509	Open in IMG/M
3300006086\|Ga0075019_10195811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1194	Open in IMG/M
3300006237\|Ga0097621_100693849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	937	Open in IMG/M
3300006642\|Ga0075521_10532819	Not Available	576	Open in IMG/M
3300009521\|Ga0116222_1559842	Not Available	501	Open in IMG/M
3300009637\|Ga0116118_1100242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	972	Open in IMG/M
3300010876\|Ga0126361_10782341	Not Available	643	Open in IMG/M
3300011120\|Ga0150983_11892182	Not Available	507	Open in IMG/M
3300012929\|Ga0137404_12132661	Not Available	524	Open in IMG/M
3300012930\|Ga0137407_11688185	Not Available	603	Open in IMG/M
3300015357\|Ga0134072_10037696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1293	Open in IMG/M
3300017823\|Ga0187818_10464039	Not Available	566	Open in IMG/M
3300017823\|Ga0187818_10565591	Not Available	513	Open in IMG/M
3300017924\|Ga0187820_1156113	Not Available	690	Open in IMG/M
3300017930\|Ga0187825_10425274	Not Available	513	Open in IMG/M
3300017935\|Ga0187848_10331349	Not Available	632	Open in IMG/M
3300017936\|Ga0187821_10128369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	948	Open in IMG/M
3300017938\|Ga0187854_10171932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	972	Open in IMG/M
3300017941\|Ga0187850_10285963	Not Available	734	Open in IMG/M
3300017943\|Ga0187819_10856193	Not Available	509	Open in IMG/M
3300017948\|Ga0187847_10108487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1527	Open in IMG/M
3300017972\|Ga0187781_10146655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1655	Open in IMG/M
3300017994\|Ga0187822_10086716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	936	Open in IMG/M
3300018007\|Ga0187805_10565302	Not Available	536	Open in IMG/M
3300018022\|Ga0187864_10196011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	961	Open in IMG/M
3300018037\|Ga0187883_10468670	Not Available	648	Open in IMG/M
3300018038\|Ga0187855_10741471	Not Available	572	Open in IMG/M
3300018042\|Ga0187871_10249259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	986	Open in IMG/M
3300018043\|Ga0187887_10745452	Not Available	579	Open in IMG/M
3300018044\|Ga0187890_10040415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2807	Open in IMG/M
3300018046\|Ga0187851_10776351	Not Available	539	Open in IMG/M
3300018047\|Ga0187859_10099509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1530	Open in IMG/M
3300018057\|Ga0187858_10284341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1052	Open in IMG/M
3300018085\|Ga0187772_10553201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	815	Open in IMG/M
3300018085\|Ga0187772_10780482	Not Available	689	Open in IMG/M
3300018090\|Ga0187770_11165550	Not Available	623	Open in IMG/M
3300019786\|Ga0182025_1174740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1938	Open in IMG/M
3300019786\|Ga0182025_1298425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2580	Open in IMG/M
3300020581\|Ga0210399_10039726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3768	Open in IMG/M
3300020582\|Ga0210395_10049659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3072	Open in IMG/M
3300020583\|Ga0210401_10611186	Not Available	952	Open in IMG/M
3300021088\|Ga0210404_10687143	Not Available	583	Open in IMG/M
3300021171\|Ga0210405_10624481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	838	Open in IMG/M
3300021401\|Ga0210393_11026687	Not Available	667	Open in IMG/M
3300021402\|Ga0210385_10647590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	807	Open in IMG/M
3300021402\|Ga0210385_10714471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	767	Open in IMG/M
3300021403\|Ga0210397_11406128	Not Available	542	Open in IMG/M
3300021420\|Ga0210394_11149102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	668	Open in IMG/M
3300021433\|Ga0210391_11483224	Not Available	520	Open in IMG/M
3300021477\|Ga0210398_10521580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967	Open in IMG/M
3300021478\|Ga0210402_11581992	Not Available	582	Open in IMG/M
3300021560\|Ga0126371_11376193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	837	Open in IMG/M
3300025439\|Ga0208323_1004506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4197	Open in IMG/M
3300025460\|Ga0208562_1097497	Not Available	575	Open in IMG/M
3300025576\|Ga0208820_1064278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	980	Open in IMG/M
3300025898\|Ga0207692_10029715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2600	Open in IMG/M
3300025905\|Ga0207685_10008087	Not Available	2975	Open in IMG/M
3300025928\|Ga0207700_10852327	Not Available	815	Open in IMG/M
3300026281\|Ga0209863_10022680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1924	Open in IMG/M
3300026328\|Ga0209802_1225244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	685	Open in IMG/M
3300026515\|Ga0257158_1125740	Not Available	516	Open in IMG/M
3300026551\|Ga0209648_10598827	Not Available	607	Open in IMG/M
3300027439\|Ga0209332_1037966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	899	Open in IMG/M
3300027439\|Ga0209332_1087674	Not Available	561	Open in IMG/M
3300027674\|Ga0209118_1118605	Not Available	740	Open in IMG/M
3300027698\|Ga0209446_1077184	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300027867\|Ga0209167_10108207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1428	Open in IMG/M
3300027867\|Ga0209167_10631474	Not Available	586	Open in IMG/M
3300027869\|Ga0209579_10249015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	954	Open in IMG/M
3300027884\|Ga0209275_10564284	Not Available	652	Open in IMG/M
3300027889\|Ga0209380_10611130	Not Available	631	Open in IMG/M
3300027895\|Ga0209624_10704924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	666	Open in IMG/M
3300027905\|Ga0209415_10359388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1206	Open in IMG/M
3300028566\|Ga0302147_10152496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	783	Open in IMG/M
3300028866\|Ga0302278_10112535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1488	Open in IMG/M
3300028874\|Ga0302155_10368153	Not Available	615	Open in IMG/M
3300028906\|Ga0308309_10657030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	911	Open in IMG/M
3300029939\|Ga0311328_10019083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6584	Open in IMG/M
3300029986\|Ga0302188_10153515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	992	Open in IMG/M
3300029992\|Ga0302276_10455473	Not Available	515	Open in IMG/M
3300030044\|Ga0302281_10151247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300030707\|Ga0310038_10063145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2040	Open in IMG/M
3300030737\|Ga0302310_10744036	Not Available	507	Open in IMG/M
3300030743\|Ga0265461_13724258	Not Available	518	Open in IMG/M
3300031122\|Ga0170822_12204131	Not Available	639	Open in IMG/M
3300031231\|Ga0170824_126448443	Not Available	727	Open in IMG/M
3300031236\|Ga0302324_101694310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	809	Open in IMG/M
3300031715\|Ga0307476_11090303	Not Available	586	Open in IMG/M
3300031718\|Ga0307474_11392303	Not Available	553	Open in IMG/M
3300031753\|Ga0307477_10089407	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300031754\|Ga0307475_10075442	Not Available	2586	Open in IMG/M
3300031820\|Ga0307473_11506107	Not Available	510	Open in IMG/M
3300031823\|Ga0307478_11396990	Not Available	581	Open in IMG/M
3300031962\|Ga0307479_10437245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1293	Open in IMG/M
3300032076\|Ga0306924_11269907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	793	Open in IMG/M
3300032160\|Ga0311301_12882098	Not Available	522	Open in IMG/M
3300032205\|Ga0307472_100903429	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	818	Open in IMG/M
3300032770\|Ga0335085_12376903	Not Available	528	Open in IMG/M
3300032805\|Ga0335078_10719567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1233	Open in IMG/M
3300032805\|Ga0335078_11802674	Not Available	665	Open in IMG/M
3300032893\|Ga0335069_10874578	Not Available	1006	Open in IMG/M
3300032955\|Ga0335076_11802368	Not Available	501	Open in IMG/M
3300033134\|Ga0335073_10238740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2225	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.98%
Aquatic	Environmental → Aquatic	25.20%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Freshwater	Environmental → Aquatic → Freshwater	22.76%
Peat	Environmental → Terrestrial → Peat	7.32%
Sediment	Environmental → Aquatic → Sediment	2.44%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.76%
Loam	Environmental → Terrestrial → Soil → Loam	17.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.20%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.06%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.63%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_09157220	2124908006	Soil	MLFAGFATVILVVRAWKNRPAPAIADGLRPVRGAELEQFRDQAGKETDL
JGI12677J13195_10140023	3300001087	Forest Soil	LVIRAWKNRPAPAIADGLRPMHGAELEQFRDQARQETDL*
JGI12269J14319_101749513	3300001356	Peatlands Soil	VVREWKNRPAPAIADGLQPVRGAELEQFRDQARKETDL*
JGI12659J15293_100662163	3300001546	Forest Soil	SWKNRPAPALADGLSPVRGAELEQFRDQAGKETDL*
JGI12635J15846_100969161	3300001593	Forest Soil	LGFGLVIMIVRSWKNRPAPAIAGGLPPVRGAELEQFRDQAGKETDL*
JGIcombinedJ26739_1005204073	3300002245	Forest Soil	LFLGFFAVVAVVRAWKNRPAPALAAGLHPVQGAELDQFRDQARKETEL*
JGIcombinedJ26739_1012204781	3300002245	Forest Soil	GLVIMIVRSWKNRPAPAIAGGLPPVRGAELEQFRDQAGKETDL*
JGI25615J43890_10701401	3300002910	Grasslands Soil	LLGFVAVAAVVRAWRSRPAPAIADGLRPVRGAERDQFREQARKETDL*
Ga0062389_1022277073	3300004092	Bog Forest Soil	VLVIRAWKNRPAPALADGLRPARGAELEQFRDQARKETDL*
Ga0062388_1005151093	3300004635	Bog Forest Soil	LFFGFGLIVLVIRAWKNRPAPALADGLRPIGGAELEQFRNQARKDTDL*
Ga0066679_105942761	3300005176	Soil	FGLIVLVIRSWKNRPAPALADGLRPVRGAELEQFRSQATKETDL*
Ga0070706_1003802673	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ALGLSIVVLVIRAWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL*
Ga0070698_1009708981	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VATVVRAWRNRPAPAIADGLRPVRGAALDQFREQARKETDL*
Ga0070733_100765761	3300005541	Surface Soil	VIRAWKNRPAPAIADGLRPVRGVELEQFRDQARKETDL*
Ga0070733_101743821	3300005541	Surface Soil	GFGLIVLVIRAWKNRPAPALADGLRPIRGAELEQFRDQARKETDL*
Ga0070732_107547902	3300005542	Surface Soil	FGLVIYIVRLWKNRPAPAIADGLRPLHGAELEQFRDQARKEIDL*
Ga0070763_100573303	3300005610	Soil	LGFGLIVMVVRSWKNRPAPAIADGLRPAHGAELEQFRDQARKETDL*
Ga0070763_109646223	3300005610	Soil	WKNRPAPALADGLTPVRGADLAQFREQARKETDL*
Ga0070717_101426811	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLGFGLIVLVIRSWKNRPAPAIADGLRPIRGAELEQFRDQAGKETDL*
Ga0075029_1005756841	3300006052	Watersheds	ALALGFGIVVMVVRSWKNRPAPALADGLRPIRGTELDEFRDKAREETDL*
Ga0075029_1013077771	3300006052	Watersheds	VRAWKNRPAPAIADGLRPVGGAELEQFREKARQETDL*
Ga0075019_101958113	3300006086	Watersheds	VIYIVRLWKNRPAPAIADGLHPLRGAELEEFRDQARKETDL*
Ga0097621_1006938491	3300006237	Miscanthus Rhizosphere	ALALGLTIVIMVVRAWKNRPAPAIADGLRPVRGAELEEFREKAREETDL*
Ga0075521_105328191	3300006642	Arctic Peat Soil	LVIRSWKNRPAPAIADGLRPVRGAELEEFREKAREETDL*
Ga0116222_15598422	3300009521	Peatlands Soil	ILGFGLIGLVIHSWQNRPAPALAEGLPPVPGAEPDRFRDQAGKETDL*
Ga0116118_11002423	3300009637	Peatland	FGLIVLVIRSWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL*
Ga0126361_107823411	3300010876	Boreal Forest Soil	LVVRAWKNRPAPAIADGLPPVRGAELEEFREKAREETDL*
Ga0150983_118921822	3300011120	Forest Soil	GFGLIMLVIRDWKNRPEPALADGLRPVRGAELEQFRDQARKDTDL*
Ga0137404_121326611	3300012929	Vadose Zone Soil	AWKNRPSPAIAGGLRPIRGAELEQFRDQAEKETDV*
Ga0137407_116881852	3300012930	Vadose Zone Soil	RAWKNRPTPAIAGGLRPIRGAELEQFRDQADKETDL*
Ga0134072_100376961	3300015357	Grasslands Soil	VVIYAWKNGSAPITASGLRSIRGAKLERFRDQARRETTL*
Ga0187818_104640393	3300017823	Freshwater Sediment	VWKNRPAPAIADGLQPLRGPELQQFRDQASKETDL
Ga0187818_105655912	3300017823	Freshwater Sediment	VVRAWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL
Ga0187820_11561132	3300017924	Freshwater Sediment	GLVVYIVRLWKNRPEPAIADGLRPVRGAELEEFRDQARKETDL
Ga0187825_104252743	3300017930	Freshwater Sediment	AWKSRPAPALADGLRPLRGAELEQFRDQARKETEL
Ga0187848_103313492	3300017935	Peatland	FLGFGLIALVIRSWKNRPAPAIADGLTPIPGPELEQFRDQARKETDL
Ga0187821_101283691	3300017936	Freshwater Sediment	IRSWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL
Ga0187854_101719323	3300017938	Peatland	FGLIVLVIRSWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL
Ga0187850_102859633	3300017941	Peatland	LIVLVIRAWKNRPAPALADGLRPVRGAELEQFRDQARKETDL
Ga0187819_108561932	3300017943	Freshwater Sediment	GLAIVILIVRAWKNRPAPAIADGLRPATGAELDRFREQARKETDL
Ga0187847_101084873	3300017948	Peatland	LGLGLVVVVIRSWKNRPAPAIAEGLHPVRGAELEQFRDQARKETDL
Ga0187781_101466553	3300017972	Tropical Peatland	LLFGFAIVVFVVRAWKNRPAPALADNLHPVAGANLDKFREQAREETEL
Ga0187822_100867161	3300017994	Freshwater Sediment	SIVVLVIRSWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL
Ga0187805_105653022	3300018007	Freshwater Sediment	VLLLGFGLVVYIVRLWKNRPEPAIADGLRPVRGAELEEFRDQARKETDL
Ga0187864_101960113	3300018022	Peatland	VLVIRSWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL
Ga0187883_104686702	3300018037	Peatland	LVIRAWKNRPAPAIADGLQPIAGAELEQFRDQARKETDL
Ga0187855_107414712	3300018038	Peatland	GFGLIALVIRTWKNRPAPALADGLRPLRGPELEQFRDQAGKETDL
Ga0187871_102492591	3300018042	Peatland	VIRSWKNRPAPAIAEGLHPVRGAELEQFRDQARKETDL
Ga0187887_107454523	3300018043	Peatland	FIVVVIREWKNRPAPALAEGLHPASSADLERFRDQAGKETDL
Ga0187890_100404155	3300018044	Peatland	FGLIVLVIRTWKNRPAPAIADGLHPVRGIELEQFRDQARKDTDL
Ga0187851_107763511	3300018046	Peatland	FGIVILVIRAWKNRPAPALADGIRPVRGAELEQFRDQARQETDL
Ga0187859_100995093	3300018047	Peatland	FLGFGLIVLVIRAWKNRPAPAIADGLQPIAGAELEQFRDQARKETDL
Ga0187858_102843411	3300018057	Peatland	IREWKNRPAPALAEGLHPASSADLERFRDQAGKETDL
Ga0187772_105532013	3300018085	Tropical Peatland	VVRAWKNRPAPAIADGLHPATGADLERFREQAREETDL
Ga0187772_107804823	3300018085	Tropical Peatland	GFGLVVYIVRIWKDRPAPAIADGLRPVRGSELEQFRDQARKETEL
Ga0187770_111655503	3300018090	Tropical Peatland	VRAWRRRPEPAIADGLRPARGAEFDQFRDQARKETEL
Ga0182025_11747404	3300019786	Permafrost	LIVLVIRAWKNRPTPAIADGLRPVRGAELEQFRDQARKETDL
Ga0182025_12984256	3300019786	Permafrost	FFGFGLIVLVIRAWKNRPTPAIADGLRPVRGAELEQFRDQARKETDL
Ga0210399_100397265	3300020581	Soil	IVRAWRNRPAPALAEGLCPVRGADLEPFRTQARKETEL
Ga0210395_100496591	3300020582	Soil	GFGLIVMVVRSWKNRPAPAIADGLRPASGAELEQFRDQARKETDL
Ga0210401_106111861	3300020583	Soil	VVLIIRAWKNRPTPAIADGLRPLRGAELEQFREKARKETDL
Ga0210404_106871431	3300021088	Soil	FGLIVMVVRSWKNRPAPAIADGLRPASGTELEQFRDQARKETDL
Ga0210405_106244811	3300021171	Soil	GFGLIVLVIRAWKSRPAPAIADGLRPVRGAELEQFRDQARQETDL
Ga0210393_110266873	3300021401	Soil	GFGLIVLVIRAWKNRPAPAIADGLRPIGGAELERFRDQARKETDL
Ga0210385_106475901	3300021402	Soil	LGFGLVGLVIRSWRKRPAPAIAGGLRPVSGARLEQFRDKARIETDL
Ga0210385_107144713	3300021402	Soil	LGLGIVVLVIRSWKNRPAPAIADGLRPVRGIELEQFRDQARKETDL
Ga0210397_114061283	3300021403	Soil	LILGFGLIVLVIRAWKNRPAPAIADGLRPVRGAELEQFRDQARQETDL
Ga0210394_111491023	3300021420	Soil	AWKNRPAPALADGLRPVRGAELEQFRDQAGKETDL
Ga0210391_114832241	3300021433	Soil	VYIVRLWKNRPAPALADGLHPIRAAELEQFRDQARKETDL
Ga0210398_105215803	3300021477	Soil	VLVIRAWKNRPAPALAGGLRPVGGAELEQFRDQARKETDL
Ga0210402_115819923	3300021478	Soil	LGFGLVIFVVRAWKNRPAPAIADGLRPIRGAELEQFRERARRETDL
Ga0126371_113761933	3300021560	Tropical Forest Soil	LIAGIVVLILIVRAWKNRPAPALADGIRPAHGTELDQFREQARKETDL
Ga0208323_10045061	3300025439	Peatland	IRSWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL
Ga0208562_10974971	3300025460	Peatland	SWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL
Ga0208820_10642781	3300025576	Peatland	GFGLIVLVIRSWKNRPAPAIADGLSPVRGAELQQFRDQARKETDL
Ga0207692_100297151	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SVVLIVRAWKNRPAPALADGIQPLHGAELERYRDQADKETDL
Ga0207685_100080874	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RAWKNRPAPAIADGLRPVRGAELDEFREKAREETDL
Ga0207700_108523273	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VILVVRAWKNRPTPAIADGIRPLRGIELEQFRDQARKDTEL
Ga0209863_100226803	3300026281	Prmafrost Soil	VVFVVRAWKNRPTPAIAGGLRHIRGAELEQFRDQADKETDV
Ga0209802_12252441	3300026328	Soil	TVVFIVRAWRNRPAPALAEGLCPVRGADLEPFRAQARKETEL
Ga0257158_11257403	3300026515	Soil	VVLVIRSWKNRPAPAIADGLRPVRGVELEHFRDQARKETDL
Ga0209648_105988271	3300026551	Grasslands Soil	VRAWRSRPAPALAEDLRPVRGADLEQFCAQARKETEL
Ga0209332_10379663	3300027439	Forest Soil	RSWKNRPAPAIAGGLRPLRGAELEQFRDQAGKETDL
Ga0209332_10876743	3300027439	Forest Soil	RSWKNRPAPAIAGGLRPVRGAELEQFRDQAGKDTDL
Ga0209118_11186053	3300027674	Forest Soil	FGLVVMVVRSWKNRPAPAIAGGLRPVRGAELEQFRDQAGKETDL
Ga0209446_10771841	3300027698	Bog Forest Soil	IVRGWKNRPSPAIADGLQPLRGAQLEQFRDQARKETDL
Ga0209167_101082071	3300027867	Surface Soil	GFGLIVLVIRAWKNRPAPALADGLRPIRGAELEQFRDQARKETDL
Ga0209167_106314742	3300027867	Surface Soil	VIRAWKNRPAPAIADGLRPVRGVELEQFRDQARKETDL
Ga0209579_102490151	3300027869	Surface Soil	LMLVVLVIRSWKNRPTPAIADGLRPARGAELEQFRDQAGKDTDL
Ga0209275_105642841	3300027884	Soil	FGLIVLVIRSWKNRPAPAIADGLRAVRGAELEQFRDQAGKETDL
Ga0209380_106111302	3300027889	Soil	VIRSWKNRPAPAIADGLRPSRGAELEQFRDQAGKETDL
Ga0209624_107049241	3300027895	Forest Soil	FLGFFAVVAVVRAWKNRPAPALAAGLHPVQGAELNQFRDQARKETEL
Ga0209415_103593881	3300027905	Peatlands Soil	IFGFGLIVLVIRSWKNRPAPALADGLISVRGAELEQFRDQARKETDL
Ga0302147_101524961	3300028566	Bog	RSWKNRPAPALADGLHTVYGTELEKFRDQAGKETDL
Ga0302278_101125353	3300028866	Bog	FGLIVLVIRSWKNRPAPALADGLHTVYGTELEKFRDQAGKETDL
Ga0302155_103681533	3300028874	Bog	FGFGLIVLVIRAWKNRPAPALADGLRPVRGAELEQFRDQARKETDL
Ga0308309_106570301	3300028906	Soil	VRSWRNRPAPAIADGLRPVRGAELEQFRDQARKDTDL
Ga0311328_100190837	3300029939	Bog	MVLVIRAWKNRPAPALADGLHPVHGAELDQFRDQARKETDL
Ga0302188_101535151	3300029986	Bog	GFGLIVLVIRSWKNRPAPALADGLHTVYGTELEKFRDQAGKETDL
Ga0302276_104554731	3300029992	Bog	RAWKNRPAPALADGLHPVHGAELDQFRDQARKETDL
Ga0302281_101512471	3300030044	Fen	VLGFGLIVLVIRSWKNRPAPALADGLHTVYGTELEKFRDQAGKETDL
Ga0310038_100631451	3300030707	Peatlands Soil	LGIVVMVVRAWKNRPAPAIADGLNPARGADLEQFRDQARKETDL
Ga0302310_107440361	3300030737	Palsa	ILGFGLVIFVVRAWKNRPTPAIADGLHPIRGAELEQFRDQAGKETDL
Ga0265461_137242582	3300030743	Soil	VLIFGFGFVVFVVRSWKNRPAPAIADGLRPVRGAELEQFRDQARKETDL
Ga0170822_122041313	3300031122	Forest Soil	YIVRSWKNRPAPAIADGLRPAHGTDLDEFREQARKETDL
Ga0170824_1264484434	3300031231	Forest Soil	IVILVVRSWKNRPAPALAGGVRPVRGAELDQFREQAQKETEQ
Ga0302324_1016943103	3300031236	Palsa	MVVLVILAWKNRPAPALADGLRPVHGAELEQFRDQARKETDL
Ga0307476_110903033	3300031715	Hardwood Forest Soil	LFVGLAIVILIVRAWKNRPTPAIADGLRPAKGVEFDRFREQARKETDL
Ga0307474_113923031	3300031718	Hardwood Forest Soil	LGFGLIALVIRSWKNHPPPVVANGIHPVRGASLEHFRAQARKETNQ
Ga0307477_100894071	3300031753	Hardwood Forest Soil	FGFGLMLLVIRSWKNRPARTGEDGLTPITGARLEQFRDQARKEADL
Ga0307475_100754424	3300031754	Hardwood Forest Soil	SWKNKPAPALADGLTPARGTELDQFREQARKETDL
Ga0307473_115061071	3300031820	Hardwood Forest Soil	TVVFIVRAWRNRPAPALAEDLFPVRGADLEQFRAQARKETEL
Ga0307478_113969902	3300031823	Hardwood Forest Soil	GLIVIVIRSWKNRPAPAIAGGLQPARGAELEQFRDQARKETDL
Ga0307479_104372453	3300031962	Hardwood Forest Soil	FGLIVLVIRSWKNRPAPAIADGLKPLRGPELEQFRDQARRETDV
Ga0306924_112699071	3300032076	Soil	VVYIVRAWKNRPAPAIADGIAPVRGPQLDEFRAQARKETDL
Ga0311301_128820981	3300032160	Peatlands Soil	VVLVIRSWKNRPTPAIADGLRPVRGAELEEFREKAREETDL
Ga0307472_1009034291	3300032205	Hardwood Forest Soil	TWKNRPAPAIADGLTPVRGRDFDEFREQARKETDL
Ga0335085_123769032	3300032770	Soil	IFVVVYIVRSWKNRPAPALADGLTPRRGADLDEFRDQARKETDL
Ga0335078_107195673	3300032805	Soil	GFGVVVLVVRAWKNRPEPAFADGLQPVRGSELDQFREQARKETDV
Ga0335078_118026743	3300032805	Soil	VFVVVYIVRTWKNRPAPALADGIAPIRGQQLDQFRDQARKETDL
Ga0335069_108745783	3300032893	Soil	GLVVLIVRGWKNRPTPAIASGLLPDRSAELEQFRALARKETDL
Ga0335076_118023682	3300032955	Soil	VRAWKNRPAPAIADGLHPVRGAELDHFREQASKETDL
Ga0335073_102387403	3300033134	Soil	VRAWKNRPAPAPAFAVPVKAADLEKFRNQAREETDL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F070236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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