Metagenome Family F070001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F070001
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	72 residues
Representative Sequence	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Number of Associated Samples	36
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	39.29 %
% of genes near scaffold ends (potentially truncated)	52.03 %
% of genes from short scaffolds (< 2000 bps)	78.86 %
Associated GOLD sequencing projects	24
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (89.431 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (89.431 % of family members)
Environment Ontology (ENVO)	Unclassified (98.374 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.74% β-sheet: 0.00% Coil/Unstructured: 80.26%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF03592	Terminase_2	9.76

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	9.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.43 %
All Organisms	root	All Organisms	10.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.43 %
Viruses	superkingdom	All Organisms → Viruses	6.50 %
cellular organisms	root	All Organisms → cellular organisms	4.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.07 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006736\|Ga0098033_1130349	Not Available	709	Open in IMG/M
3300006736\|Ga0098033_1203037	Not Available	549	Open in IMG/M
3300006751\|Ga0098040_1180192	Not Available	620	Open in IMG/M
3300006753\|Ga0098039_1105225	Not Available	971	Open in IMG/M
3300006753\|Ga0098039_1310172	Not Available	526	Open in IMG/M
3300008050\|Ga0098052_1151719	Not Available	918	Open in IMG/M
3300008216\|Ga0114898_1013426	Not Available	3039	Open in IMG/M
3300008216\|Ga0114898_1061522	Not Available	1176	Open in IMG/M
3300008216\|Ga0114898_1061703	Not Available	1174	Open in IMG/M
3300008216\|Ga0114898_1063133	Not Available	1157	Open in IMG/M
3300008216\|Ga0114898_1078215	Not Available	1014	Open in IMG/M
3300008216\|Ga0114898_1098568	Not Available	876	Open in IMG/M
3300008216\|Ga0114898_1185541	Not Available	584	Open in IMG/M
3300008217\|Ga0114899_1031851	Not Available	1962	Open in IMG/M
3300008217\|Ga0114899_1038308	Not Available	1759	Open in IMG/M
3300008217\|Ga0114899_1063941	Not Available	1286	Open in IMG/M
3300008217\|Ga0114899_1073757	Not Available	1178	Open in IMG/M
3300008217\|Ga0114899_1095292	Not Available	1007	Open in IMG/M
3300008217\|Ga0114899_1101721	Not Available	967	Open in IMG/M
3300008217\|Ga0114899_1112923	Not Available	907	Open in IMG/M
3300008217\|Ga0114899_1117089	Not Available	887	Open in IMG/M
3300008217\|Ga0114899_1118955	Not Available	878	Open in IMG/M
3300008217\|Ga0114899_1120543	Not Available	871	Open in IMG/M
3300008218\|Ga0114904_1033799	Not Available	1406	Open in IMG/M
3300008218\|Ga0114904_1058955	Not Available	987	Open in IMG/M
3300008219\|Ga0114905_1030235	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300008219\|Ga0114905_1071567	Not Available	1240	Open in IMG/M
3300008219\|Ga0114905_1273802	Not Available	524	Open in IMG/M
3300008220\|Ga0114910_1051811	Not Available	1313	Open in IMG/M
3300008220\|Ga0114910_1071927	Not Available	1068	Open in IMG/M
3300008220\|Ga0114910_1093286	Not Available	903	Open in IMG/M
3300008220\|Ga0114910_1163837	Not Available	627	Open in IMG/M
3300009412\|Ga0114903_1013342	Not Available	2266	Open in IMG/M
3300009412\|Ga0114903_1056728	Not Available	908	Open in IMG/M
3300009412\|Ga0114903_1074657	Not Available	767	Open in IMG/M
3300009413\|Ga0114902_1016963	All Organisms → cellular organisms → Bacteria	2400	Open in IMG/M
3300009413\|Ga0114902_1054445	Not Available	1149	Open in IMG/M
3300009414\|Ga0114909_1058278	Not Available	1125	Open in IMG/M
3300009414\|Ga0114909_1059862	Not Available	1106	Open in IMG/M
3300009414\|Ga0114909_1086188	Not Available	876	Open in IMG/M
3300009418\|Ga0114908_1020477	All Organisms → Viruses → Predicted Viral	2591	Open in IMG/M
3300009418\|Ga0114908_1057888	Not Available	1372	Open in IMG/M
3300009602\|Ga0114900_1021201	Not Available	2341	Open in IMG/M
3300009602\|Ga0114900_1047546	Not Available	1333	Open in IMG/M
3300009602\|Ga0114900_1048429	Not Available	1315	Open in IMG/M
3300009603\|Ga0114911_1031074	Not Available	1735	Open in IMG/M
3300009603\|Ga0114911_1071053	Not Available	1048	Open in IMG/M
3300009603\|Ga0114911_1073777	Not Available	1024	Open in IMG/M
3300009603\|Ga0114911_1083259	Not Available	950	Open in IMG/M
3300009603\|Ga0114911_1102296	Not Available	834	Open in IMG/M
3300009603\|Ga0114911_1105182	Not Available	820	Open in IMG/M
3300009603\|Ga0114911_1135745	Not Available	697	Open in IMG/M
3300009603\|Ga0114911_1140632	Not Available	681	Open in IMG/M
3300009604\|Ga0114901_1024445	All Organisms → Viruses → Predicted Viral	2307	Open in IMG/M
3300009604\|Ga0114901_1028981	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300009604\|Ga0114901_1066117	All Organisms → Viruses → Predicted Viral	1205	Open in IMG/M
3300009604\|Ga0114901_1069610	Not Available	1164	Open in IMG/M
3300009604\|Ga0114901_1090836	Not Available	977	Open in IMG/M
3300009604\|Ga0114901_1105397	Not Available	884	Open in IMG/M
3300009605\|Ga0114906_1019287	Not Available	2817	Open in IMG/M
3300009605\|Ga0114906_1045372	Not Available	1694	Open in IMG/M
3300009605\|Ga0114906_1116393	Not Available	948	Open in IMG/M
3300009605\|Ga0114906_1164537	Not Available	758	Open in IMG/M
3300009605\|Ga0114906_1214825	Not Available	639	Open in IMG/M
3300009620\|Ga0114912_1070874	Not Available	861	Open in IMG/M
3300021791\|Ga0226832_10029185	All Organisms → Viruses → Predicted Viral	1840	Open in IMG/M
3300021791\|Ga0226832_10163123	Not Available	853	Open in IMG/M
3300025078\|Ga0208668_1071084	Not Available	625	Open in IMG/M
3300025251\|Ga0208182_1009895	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300025251\|Ga0208182_1016450	Not Available	1910	Open in IMG/M
3300025251\|Ga0208182_1017130	All Organisms → Viruses → Predicted Viral	1858	Open in IMG/M
3300025251\|Ga0208182_1023295	Not Available	1502	Open in IMG/M
3300025251\|Ga0208182_1037063	Not Available	1078	Open in IMG/M
3300025251\|Ga0208182_1044411	Not Available	947	Open in IMG/M
3300025264\|Ga0208029_1043338	Not Available	977	Open in IMG/M
3300025267\|Ga0208179_1013208	Not Available	2521	Open in IMG/M
3300025267\|Ga0208179_1015523	Not Available	2232	Open in IMG/M
3300025267\|Ga0208179_1037023	Not Available	1175	Open in IMG/M
3300025267\|Ga0208179_1040509	Not Available	1102	Open in IMG/M
3300025267\|Ga0208179_1044707	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300025267\|Ga0208179_1059431	Not Available	835	Open in IMG/M
3300025267\|Ga0208179_1065308	Not Available	781	Open in IMG/M
3300025270\|Ga0208813_1044849	Not Available	991	Open in IMG/M
3300025270\|Ga0208813_1046977	Not Available	963	Open in IMG/M
3300025270\|Ga0208813_1048030	Not Available	949	Open in IMG/M
3300025270\|Ga0208813_1067501	Not Available	758	Open in IMG/M
3300025270\|Ga0208813_1109227	Not Available	544	Open in IMG/M
3300025274\|Ga0208183_1012189	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300025274\|Ga0208183_1038649	Not Available	994	Open in IMG/M
3300025274\|Ga0208183_1056365	Not Available	777	Open in IMG/M
3300025277\|Ga0208180_1016875	Not Available	2259	Open in IMG/M
3300025277\|Ga0208180_1054402	Not Available	1014	Open in IMG/M
3300025280\|Ga0208449_1036039	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300025282\|Ga0208030_1027453	All Organisms → Viruses → Predicted Viral	1801	Open in IMG/M
3300025282\|Ga0208030_1048936	Not Available	1210	Open in IMG/M
3300025286\|Ga0208315_1026281	Not Available	1741	Open in IMG/M
3300025286\|Ga0208315_1062960	Not Available	950	Open in IMG/M
3300025286\|Ga0208315_1079263	Not Available	810	Open in IMG/M
3300025286\|Ga0208315_1154336	Not Available	510	Open in IMG/M
3300025293\|Ga0208934_1012762	Not Available	1818	Open in IMG/M
3300025293\|Ga0208934_1037480	Not Available	919	Open in IMG/M
3300025301\|Ga0208450_1022144	Not Available	1814	Open in IMG/M
3300025301\|Ga0208450_1079963	Not Available	743	Open in IMG/M
3300025301\|Ga0208450_1102142	Not Available	626	Open in IMG/M
3300025301\|Ga0208450_1129863	Not Available	529	Open in IMG/M
3300025305\|Ga0208684_1020572	Not Available	2083	Open in IMG/M
3300025305\|Ga0208684_1062342	Not Available	994	Open in IMG/M
3300025305\|Ga0208684_1069917	Not Available	922	Open in IMG/M
3300028022\|Ga0256382_1174163	Not Available	514	Open in IMG/M
3300028039\|Ga0256380_1032564	Not Available	831	Open in IMG/M
3300032820\|Ga0310342_101778812	Not Available	736	Open in IMG/M
3300034629\|Ga0326756_017321	Not Available	836	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	95.94%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.63%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	95.94%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.63%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.63%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	89.43%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.69%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.63%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.63%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.81%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0098033_11303493	3300006736	Marine	MNPWEFLQKYFNVARDHFRGPVGDKRFKQPVELDWRGMLLPLIDVSSFEKDHRGKRVYTHKKKKYNIPEVPEWRP*
Ga0098033_12030372	3300006736	Marine	MAREHLRGPVDDERFKQPVELDWKGMLLPLIDVASFEKDHRGDRPYFKKKKKYN
Ga0098040_11801922	3300006751	Marine	VNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPE*
Ga0098039_11052252	3300006753	Marine	MNPWEFLQKYFNVARDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYTHKKKKYNIPEVPEWRP*
Ga0098039_13101721	3300006753	Marine	RYEYAIWTRHIRKEARKTAKEKEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0098052_11517192	3300008050	Marine	MAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114898_10134263	3300008216	Deep Ocean	MNPWEFLQKYFNVAKDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYFNKKKKYNIPEVPEWRP*
Ga0114898_10615222	3300008216	Deep Ocean	VNPWEYLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYLKKKKKYNIPEVPEWRPR*
Ga0114898_10617031	3300008216	Deep Ocean	FRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114898_10631332	3300008216	Deep Ocean	MAREHLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQKDHLGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114898_10782152	3300008216	Deep Ocean	KEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114898_10985681	3300008216	Deep Ocean	IWTRHIRKEARKTAKEKEEEVNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114898_11855411	3300008216	Deep Ocean	YAIWTRHIRKEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114899_10318512	3300008217	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFERDHEGNRVYFKKKKKYNIPEVPEWRPR*
Ga0114899_10383081	3300008217	Deep Ocean	KTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGNRVYLKKKKKYNIPEVPEWRPM*
Ga0114899_10639412	3300008217	Deep Ocean	GPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114899_10737572	3300008217	Deep Ocean	VNPGEYLQRYLGMAREHFRGSVDDKRFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYFHKKKKYNIPEVPEWRPR*
Ga0114899_10952921	3300008217	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114899_11017211	3300008217	Deep Ocean	EEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDKEGDRVYFKKKKKYNIPEVPEWRPR*
Ga0114899_11129231	3300008217	Deep Ocean	MNPWEYLQRYLGMAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114899_11170891	3300008217	Deep Ocean	NIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114899_11189552	3300008217	Deep Ocean	MNPWEYLQRYLNIAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEV
Ga0114899_11205433	3300008217	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYFHKKKKYNIPE
Ga0114904_10337992	3300008218	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114904_10589552	3300008218	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114904_11377841	3300008218	Deep Ocean	DKRFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYFHKKKKYNIPEVPEWRPR*
Ga0114905_10302353	3300008219	Deep Ocean	EYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114905_10715672	3300008219	Deep Ocean	MNPWEYLQRYLNIAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114905_12738022	3300008219	Deep Ocean	EYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114910_10518112	3300008220	Deep Ocean	YLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114910_10719272	3300008220	Deep Ocean	REHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114910_10932862	3300008220	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114910_11638372	3300008220	Deep Ocean	YLGMAREHFRGPVDDERSKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114903_10133422	3300009412	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKSMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114903_10567282	3300009412	Deep Ocean	MNPWEYLQRYLGMAREHLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114903_10746571	3300009412	Deep Ocean	IRKEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114902_10169633	3300009413	Deep Ocean	VNPWEYLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDLASFEKDYKGDRPFLKKKKKYNIPEVPEWRPR*
Ga0114902_10544451	3300009413	Deep Ocean	VNPWEYLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114909_10582782	3300009414	Deep Ocean	EKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVEMDWKGMLLPLIDITSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114909_10598621	3300009414	Deep Ocean	KEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114909_10861882	3300009414	Deep Ocean	KEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDLASFEKDYKGDRPFLKKKKKYNIPEVPEWRPR*
Ga0114908_10204771	3300009418	Deep Ocean	RYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVASFERDHEGNRVYLKKKKKYNIPEVPEWRPR*
Ga0114908_10578883	3300009418	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114900_10212013	3300009602	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114900_10475462	3300009602	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114900_10484293	3300009602	Deep Ocean	DHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYFNKKKKYNIPEVPEWRP
Ga0114900_10784942	3300009602	Deep Ocean	ERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114911_10310741	3300009603	Deep Ocean	KEEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114911_10605222	3300009603	Deep Ocean	PVDDERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114911_10710531	3300009603	Deep Ocean	MNPWEYLQRYLGMAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPE
Ga0114911_10737771	3300009603	Deep Ocean	RKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114911_10832591	3300009603	Deep Ocean	WEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQKDHLGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114911_11022961	3300009603	Deep Ocean	EYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVASFERDHEGNRVYLKKKKKYNIPEVPEWRPR*
Ga0114911_11051822	3300009603	Deep Ocean	VNPWEYLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114911_11357452	3300009603	Deep Ocean	FRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114911_11406321	3300009603	Deep Ocean	RYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114901_10244451	3300009604	Deep Ocean	AREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114901_10289811	3300009604	Deep Ocean	EYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114901_10661172	3300009604	Deep Ocean	AREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFHKKKKYNIPEVPEWRPR*
Ga0114901_10696102	3300009604	Deep Ocean	LNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114901_10908362	3300009604	Deep Ocean	QRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114901_11053972	3300009604	Deep Ocean	HLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0114906_10192872	3300009605	Deep Ocean	MNPWEYLQRYLNIAREHLRGPVDDERFKQPVELDWKGMLLPLIDVASFERDHEGNRVYLKKKKKYNIPEVPEWRPR*
Ga0114906_10453722	3300009605	Deep Ocean	VNPWEYLQRYLGMAREHFRGPVDDERFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114906_10795462	3300009605	Deep Ocean	DERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR*
Ga0114906_10991981	3300009605	Deep Ocean	RFKQPVELDWKGMLLPLIDITSFQKDHRGDRPYFHKKKKYNIPEVPEWRPR*
Ga0114906_11163932	3300009605	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQKDHLGDRPYFKKKKKYNIPEVPEWRPM*
Ga0114906_11645372	3300009605	Deep Ocean	PVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114906_12148251	3300009605	Deep Ocean	TRHIRKEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0114912_10708741	3300009620	Deep Ocean	NIWTRHIRKEARKTAKEKEEEVNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR*
Ga0114912_11050392	3300009620	Deep Ocean	RFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR*
Ga0226832_100291852	3300021791	Hydrothermal Vent Fluids	MNPWEFLQKYFSVAKDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYTHKKKKYNIPEVPEWRP
Ga0226832_101631232	3300021791	Hydrothermal Vent Fluids	MAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPE
Ga0208668_10710843	3300025078	Marine	LMNPWEFLQKYFNVARDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYTHKKKKYNIPEVPEWRP
Ga0208182_10098954	3300025251	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKSMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208182_10164503	3300025251	Deep Ocean	MNPWEFLQKYFNVAKDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYFNKKKKYNIPEVPEWRP
Ga0208182_10171301	3300025251	Deep Ocean	EYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR
Ga0208182_10232951	3300025251	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR
Ga0208182_10370632	3300025251	Deep Ocean	MAREHLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208182_10444112	3300025251	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208029_10433382	3300025264	Deep Ocean	FRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208179_10132082	3300025267	Deep Ocean	MNPWEFLQKYFSVAKDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYFNKKKKYNIPEVPEWRP
Ga0208179_10155233	3300025267	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208179_10370231	3300025267	Deep Ocean	FRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0208179_10405092	3300025267	Deep Ocean	MNPWEYLQRYLGMAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208179_10447071	3300025267	Deep Ocean	AKEKEEEVNPWEYLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0208179_10594312	3300025267	Deep Ocean	FRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYLKKKKKYNIPEVPEWRPR
Ga0208179_10653081	3300025267	Deep Ocean	MAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208813_10349932	3300025270	Deep Ocean	DERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0208813_10448492	3300025270	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208813_10469771	3300025270	Deep Ocean	LQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFERDHLGDRPYFKKKKKYNIPEVPEWRPM
Ga0208813_10480302	3300025270	Deep Ocean	MNPWEYLQRYLNIAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR
Ga0208813_10675012	3300025270	Deep Ocean	GNIWTRHIRKEARKTAKEKEEEVNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208813_11092273	3300025270	Deep Ocean	MNPWEFLQKYFNVAKDHFRGPVGDKRFKQPVELDWRGMLLPLVDVSSFEKDHEGKRVYFNKKKKYNI
Ga0208183_10121893	3300025274	Deep Ocean	RKEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHKGDRPYFKKKKKYNIPEVPEWRPR
Ga0208183_10386492	3300025274	Deep Ocean	RKEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208183_10563652	3300025274	Deep Ocean	PWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208180_10168751	3300025277	Deep Ocean	YGKKEKEEEVNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208180_10461941	3300025277	Deep Ocean	GPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFHKKKKYNIPEVPEWRPR
Ga0208180_10544022	3300025277	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208449_10360392	3300025280	Deep Ocean	VNPWEYLQRYLNIARKHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0208030_10274531	3300025282	Deep Ocean	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208030_10489361	3300025282	Deep Ocean	MNPWEYLQRYLNIAREHLRGPVDDERFKQPVELDWKGMLLPLIDVASFERDHEGNRVYLKKKKKYNIPEVPEWRPR
Ga0208315_10262812	3300025286	Deep Ocean	KEARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHEGNRVYLKKKKKYNIPEVPEWRPM
Ga0208315_10288552	3300025286	Deep Ocean	GPVDDERFKQPVELDWKGMLLPLIDITSFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208315_10629602	3300025286	Deep Ocean	NIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPM
Ga0208315_10792631	3300025286	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFQKDHLGDRPYFKKKKKYN
Ga0208315_11543362	3300025286	Deep Ocean	YLQRYLGMAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYFHKKKKYNIPEVPEWRPR
Ga0208934_10127621	3300025293	Deep Ocean	NIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208934_10374802	3300025293	Deep Ocean	MNPWEYLQRYLGMAREHLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208450_10221441	3300025301	Deep Ocean	ARKTAKEKEEEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208450_10264172	3300025301	Deep Ocean	VDDERFKQPVELDWKGMLLPLIDVTSFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208450_10799632	3300025301	Deep Ocean	GPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHLGDRPYLKKKKKYNIPEVPEWRPR
Ga0208450_11021421	3300025301	Deep Ocean	MNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0208450_11298632	3300025301	Deep Ocean	VNPWEYLQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR
Ga0208684_10205722	3300025305	Deep Ocean	LQRYLGMAREHLRGPVDDERFKQPVELDWKGMLLPLIDITSFQRDHRGDRPYLKKKKKYNIPEVPEWRPR
Ga0208684_10623424	3300025305	Deep Ocean	MAREHLRGPVDDERFKQPVELDWKGMLLPLIDVASFERDHRGDRPYFKKKKKYNIPEVPEWRPR
Ga0208684_10699171	3300025305	Deep Ocean	EEVNPWEYLQRYLNIAREHFRGPVDDKRFKQPVELDWKGMLLPLIDITSFEKDHLGDRPYFKKKKKYNIPEVPEWRPR
Ga0208684_10939981	3300025305	Deep Ocean	RGPVDDERFKQPVELDWKGMLLPLIDVTSFEKDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0256382_11741631	3300028022	Seawater	VNPWEYLQRYLNIAREHFRGPVDDERFKQPVELDWKGMLLPLIDVTSFERDHEGKRVYFHKKKKYNIPEVPEWRPR
Ga0256380_10325641	3300028039	Seawater	GPVDDERFKQPVELDWKGMLLPLIDVTSFQRDHRGDLPYFKKKKKYNIPEVPEWRPR
Ga0310342_1017788121	3300032820	Seawater	MAREHLRGPVDDKRFKQPVELDWKGMLLPLIDVTSFQRDNEGDWPYFKKKKKPQVSEVPEWRP
Ga0326756_017321_188_415	3300034629	Filtered Seawater	MNPWEFLQKYFKVAKEHFRGPVGDKRFKQPVELDWKNILLPLLDVTSFQKDHMGDRVYFHKKKKYNIPEVPEWKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F070001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences