Metagenome / Metatranscriptome Family F069973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	117 residues
Representative Sequence	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVEA
Number of Associated Samples	103
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.72 %
% of genes near scaffold ends (potentially truncated)	28.46 %
% of genes from short scaffolds (< 2000 bps)	77.24 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (10.569 % of family members)
Environment Ontology (ENVO)	Unclassified (43.089 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.537 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.78% β-sheet: 16.22% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1th8b_	1th8	0.79563
c.14.1.3: Crotonase-like	d2a7ka1	2a7k	0.72601
c.14.1.3: Crotonase-like	d1sg4a1	1sg4	0.72291
c.14.1.0: automated matches	d2q35a1	2q35	0.71799
c.14.1.0: automated matches	d3fdua1	3fdu	0.71718

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF00664	ABC_membrane	26.83
PF01740	STAS	8.13
PF01434	Peptidase_M41	6.50
PF00196	GerE	1.63
PF00990	GGDEF	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	6.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.54 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.29 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.29 %
Unclassified	root	N/A	28.46 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	47.97 %
Unclassified	root	N/A	28.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.44 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	47.97 %
Unclassified	root	N/A	28.46 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.46 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	5.69 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	4.07 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.46 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	5.69 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.44 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.46 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5.69 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.44 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10024896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4058	Open in IMG/M
3300002568\|C688J35102_117927892	Not Available	516	Open in IMG/M
3300002568\|C688J35102_119178682	Not Available	650	Open in IMG/M
3300002568\|C688J35102_120698586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1374	Open in IMG/M
3300002568\|C688J35102_120747656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1476	Open in IMG/M
3300002568\|C688J35102_120843927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1785	Open in IMG/M
3300002568\|C688J35102_120861685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1872	Open in IMG/M
3300002568\|C688J35102_120893569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2081	Open in IMG/M
3300003267\|soilL1_10165491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2144	Open in IMG/M
3300003321\|soilH1_10353667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1282	Open in IMG/M
3300003324\|soilH2_10080341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1113	Open in IMG/M
3300004081\|Ga0063454_100354228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	954	Open in IMG/M
3300004081\|Ga0063454_100458874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	879	Open in IMG/M
3300004081\|Ga0063454_100673784	Not Available	773	Open in IMG/M
3300004081\|Ga0063454_102027629	Not Available	509	Open in IMG/M
3300004153\|Ga0063455_100214190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	969	Open in IMG/M
3300004463\|Ga0063356_100527532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1571	Open in IMG/M
3300005093\|Ga0062594_102263285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005330\|Ga0070690_100122687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1746	Open in IMG/M
3300005334\|Ga0068869_100086769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2346	Open in IMG/M
3300005334\|Ga0068869_100101982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2171	Open in IMG/M
3300005337\|Ga0070682_100022337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3746	Open in IMG/M
3300005337\|Ga0070682_100887480	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005343\|Ga0070687_100519750	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005347\|Ga0070668_100973736	Not Available	761	Open in IMG/M
3300005355\|Ga0070671_100526147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1018	Open in IMG/M
3300005356\|Ga0070674_100182732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1608	Open in IMG/M
3300005441\|Ga0070700_100701757	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005456\|Ga0070678_100055777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2886	Open in IMG/M
3300005530\|Ga0070679_101512543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300005539\|Ga0068853_101955821	Not Available	569	Open in IMG/M
3300005544\|Ga0070686_100473010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	967	Open in IMG/M
3300005578\|Ga0068854_102143938	Not Available	516	Open in IMG/M
3300005719\|Ga0068861_100267392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1467	Open in IMG/M
3300005764\|Ga0066903_102992925	Not Available	916	Open in IMG/M
3300005840\|Ga0068870_10038686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2464	Open in IMG/M
3300005841\|Ga0068863_100694964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1011	Open in IMG/M
3300006058\|Ga0075432_10410700	Not Available	586	Open in IMG/M
3300006755\|Ga0079222_10771434	Not Available	778	Open in IMG/M
3300006844\|Ga0075428_101193776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	802	Open in IMG/M
3300006871\|Ga0075434_100402155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1390	Open in IMG/M
3300006904\|Ga0075424_100103704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3000	Open in IMG/M
3300006914\|Ga0075436_100911024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300009011\|Ga0105251_10065074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1707	Open in IMG/M
3300009098\|Ga0105245_10023055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5462	Open in IMG/M
3300009098\|Ga0105245_10354855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1454	Open in IMG/M
3300009101\|Ga0105247_10026857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3479	Open in IMG/M
3300009156\|Ga0111538_11078528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1016	Open in IMG/M
3300009162\|Ga0075423_10085404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3293	Open in IMG/M
3300009174\|Ga0105241_10311209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1355	Open in IMG/M
3300009176\|Ga0105242_11183959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	783	Open in IMG/M
3300009177\|Ga0105248_10113790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3051	Open in IMG/M
3300009553\|Ga0105249_11106380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	862	Open in IMG/M
3300009840\|Ga0126313_10000474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19140	Open in IMG/M
3300009840\|Ga0126313_10763608	Not Available	785	Open in IMG/M
3300010041\|Ga0126312_10480394	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010044\|Ga0126310_10825507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	715	Open in IMG/M
3300010371\|Ga0134125_10200219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2223	Open in IMG/M
3300010373\|Ga0134128_10681929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300010375\|Ga0105239_12772032	Not Available	572	Open in IMG/M
3300010400\|Ga0134122_11180886	Not Available	764	Open in IMG/M
3300011332\|Ga0126317_10644011	Not Available	554	Open in IMG/M
3300012212\|Ga0150985_104501019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1325	Open in IMG/M
3300012212\|Ga0150985_112777060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1040	Open in IMG/M
3300012469\|Ga0150984_112140519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1994	Open in IMG/M
3300012469\|Ga0150984_122571797	Not Available	748	Open in IMG/M
3300012951\|Ga0164300_10179109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1020	Open in IMG/M
3300012984\|Ga0164309_10025337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3179	Open in IMG/M
3300012985\|Ga0164308_10090560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2120	Open in IMG/M
3300012987\|Ga0164307_10447864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	963	Open in IMG/M
3300013297\|Ga0157378_10394772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1362	Open in IMG/M
3300013306\|Ga0163162_10536142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1299	Open in IMG/M
3300013308\|Ga0157375_10726990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1145	Open in IMG/M
3300014326\|Ga0157380_12857796	Not Available	549	Open in IMG/M
3300014497\|Ga0182008_10477370	Not Available	682	Open in IMG/M
3300014745\|Ga0157377_10055325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2250	Open in IMG/M
3300014968\|Ga0157379_10141592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2168	Open in IMG/M
3300015371\|Ga0132258_12204035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1383	Open in IMG/M
3300015372\|Ga0132256_100050111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3877	Open in IMG/M
3300015373\|Ga0132257_100134795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2880	Open in IMG/M
3300015374\|Ga0132255_100480670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1822	Open in IMG/M
3300025735\|Ga0207713_1254259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300025900\|Ga0207710_10045328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1961	Open in IMG/M
3300025901\|Ga0207688_10034370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2807	Open in IMG/M
3300025901\|Ga0207688_10394020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300025903\|Ga0207680_11314125	Not Available	514	Open in IMG/M
3300025908\|Ga0207643_10026146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3230	Open in IMG/M
3300025913\|Ga0207695_11162518	Not Available	652	Open in IMG/M
3300025919\|Ga0207657_11339251	Not Available	540	Open in IMG/M
3300025921\|Ga0207652_11667667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300025927\|Ga0207687_10484196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300025931\|Ga0207644_10046933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3080	Open in IMG/M
3300025937\|Ga0207669_10794600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	784	Open in IMG/M
3300025942\|Ga0207689_10017083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6140	Open in IMG/M
3300025944\|Ga0207661_11092736	Not Available	734	Open in IMG/M
3300025961\|Ga0207712_11738099	Not Available	559	Open in IMG/M
3300025972\|Ga0207668_11326853	Not Available	648	Open in IMG/M
3300026023\|Ga0207677_10569221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300026035\|Ga0207703_10576151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1063	Open in IMG/M
3300026078\|Ga0207702_10633213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1051	Open in IMG/M
3300026116\|Ga0207674_10471794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300026118\|Ga0207675_100388896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1373	Open in IMG/M
3300028379\|Ga0268266_11019442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	801	Open in IMG/M
3300028705\|Ga0307276_10001507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3271	Open in IMG/M
3300028778\|Ga0307288_10198621	Not Available	772	Open in IMG/M
3300028812\|Ga0247825_10917993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300028889\|Ga0247827_11324300	Not Available	505	Open in IMG/M
3300030336\|Ga0247826_10003494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5192	Open in IMG/M
3300031152\|Ga0307501_10057418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300031852\|Ga0307410_10523527	Not Available	979	Open in IMG/M
3300031852\|Ga0307410_11822597	Not Available	541	Open in IMG/M
3300031901\|Ga0307406_10817026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300031901\|Ga0307406_10971753	Not Available	727	Open in IMG/M
3300031944\|Ga0310884_10960182	Not Available	530	Open in IMG/M
3300031995\|Ga0307409_101330964	Not Available	744	Open in IMG/M
3300031996\|Ga0308176_10364410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1431	Open in IMG/M
3300031996\|Ga0308176_11393402	Not Available	746	Open in IMG/M
3300032002\|Ga0307416_101213707	Not Available	860	Open in IMG/M
3300032002\|Ga0307416_101375471	Not Available	812	Open in IMG/M
3300032005\|Ga0307411_11239339	Not Available	678	Open in IMG/M
3300032013\|Ga0310906_10440970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300032174\|Ga0307470_11804593	Not Available	518	Open in IMG/M
3300034268\|Ga0372943_0059570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2154	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.72%
Environmental	Environmental	42.28%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.72%
Terrestrial	Environmental → Terrestrial	41.46%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.51%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.76%
Loam	Environmental → Terrestrial → Soil → Loam	18.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.06%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	10.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	10.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.06%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.44%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.63%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100248963	3300001686	Soil	VNGIVSTRLGERTCVIGVPAALDAGAARGLEDGVNVAMADGCRDFVLDFTAVHGCRDRRPTAALSRIAQGLAREGCDVVVAARHIDLLTFFDSVPSWSNLPLALERDEALALLLERPVET
C688J35102_1179278921	3300002568	Soil	VKGIESTRLGERTCVMCVPAALDAVAAKRLEDDVNVAMADGYRDFVLDFTAVRGCRDRRPTATLARIAHGLTRRGCDVVVAARSVDLLTFFDSVPSWSRLPLAM
C688J35102_1191786822	3300002568	Soil	DAGAAKRLEDGVNVAMADGYRDFVLDFTAVRGCRDRRPTATLSRIAHGLTRHGCDVVVAARSVDLLTFFDSVPSWSRLPLAMERNEALALLLERPVEA*
C688J35102_1206985861	3300002568	Soil	VTAITSRRLGERTCVVSVPSSLDATAARGLEDGVNVAMADGCRDFVLDFTAVRSCRDRRPTAALARIANSLVDQRCEVVVAARHIDLLTFFDSVPTWSKLQLALERDEALALLLERPVEA
C688J35102_1207476563	3300002568	Soil	VVSVPAALDDGAARRLEDRVNVAMADGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA*
C688J35102_1208439272	3300002568	Soil	VNGVMSTRLGERTCVLSVPAALDAAAARRLEERLDVAMADGCRDFVLDFTAVRGCRDRRPTAALARIAHRLGRQGCEAIVAARHIDLLTFFDSVPTWSRLPLAFERDEALALLLERPVEA
C688J35102_1208616852	3300002568	Soil	VTPVTSTRLGERTCVVSVPPSLDAGAARNLEDGVNTAMADGCRDFVLDFTAVRACRDRRPTAALARIAHRLLGQRCEVVVAARHVDLLTYFDSVPSWSKLPLALERNEALALLLERPVDG
C688J35102_1208935692	3300002568	Soil	MKVPAALDAVAARDLEDRVNGEMADGCRDFVLDFTAVRGCRDRRPTATLARIAHRLTGCGCEVVVAARHIDLLTFFDSVPSWSKLPLALERDEALALLLERPVEA*
soilL1_101654913	3300003267	Sugarcane Root And Bulk Soil	MRLGERTCVVTVPAPLDAPVARGLEAGVNEAMAEGCRDFVLDFTAVRGCRDRRPTAALARVARGLVTRGCAVVVAAHHADLLTFLDSVPSWSRLPLALERNEALALLLERPADD*
soilH1_103536672	3300003321	Sugarcane Root And Bulk Soil	MRLGERTCVVTVPAPLDAPVARGLEAGVNEAMAEGCRDFVLDFTAVRGCRDRRPTAALARVARGLVTRGCAVVVAAHHADLLTFLDSVPSWSKLPLALERNEALALLLERPADD*
soilH2_100803412	3300003324	Sugarcane Root And Bulk Soil	MSVPAALDASAAQGLEENLDVAMADGCRDFVLDFTAVRACRDRRPTAALSRIAHRLMGQGCEVVVAARHVDLLTFFDSVPSWSRLPLAHERDEALALLLERPVEN*
Ga0063454_1003542281	3300004081	Soil	VTAITSTRLGERTCVVSVPSALDAGAARSLEEDVNVAMADGCRDFVLDFTAVQGCRDRRPTAALSRIAHRLMGHDECAVIVAARHIDLLTFFDSVPSWSKLPLALERDE
Ga0063454_1004588741	3300004081	Soil	VKCIESTRLGERTCVMKVPAALDAVAARDLEDRVNGEMADGCRDFVLDFTAVRGCRDRRPTATLARIAHRLTGCGCEVVVAARHIDLLTFFDSVPSWSKLPLALERDE
Ga0063454_1006737841	3300004081	Soil	MCVPAALDAGAAKRLEDGVNVAMADGYRDFVLDFTAVRGCRDRRPTATLSRIAHGLTRHGCDVVVAARSIDLLTFFDSVPSWSRLPLAMERNEALALLLERPVEA*
Ga0063454_1020276291	3300004081	Soil	MRTGIVSRRLGERTCVIGVPAALDAVAARSLEDGVNVAMADGCRDFVLDFTAVRGCRDRRPTAALARIAHRLGRQGCEAIVAARHIDLLTFFDSVPTWSRLPLAFERDEALALLLERPVEA*
Ga0063455_1002141903	3300004153	Soil	VVSVPAALDDGAARRLEDRVNVAMADGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA
Ga0063356_1005275322	3300004463	Arabidopsis Thaliana Rhizosphere	MNGITSTRLGERTCVVEVAAALDAGAAERLDERVGTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACDVDLLTFLDSVPTFSKLPVALERDEALALLLERPVVVSR*
Ga0062594_1022632852	3300005093	Soil	MRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0070690_1001226873	3300005330	Switchgrass Rhizosphere	MRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0068869_1000867692	3300005334	Miscanthus Rhizosphere	MRLGERTCVVKVASVLDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0068869_1001019823	3300005334	Miscanthus Rhizosphere	MRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV*
Ga0070682_1000223373	3300005337	Corn Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0070682_1008874802	3300005337	Corn Rhizosphere	VNGITSTRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR*
Ga0070687_1005197502	3300005343	Switchgrass Rhizosphere	VNGITSMRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQHPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0070668_1009737361	3300005347	Switchgrass Rhizosphere	MRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVET*
Ga0070671_1005261471	3300005355	Switchgrass Rhizosphere	MRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0070674_1001827323	3300005356	Miscanthus Rhizosphere	MRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVA
Ga0070700_1007017572	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQHPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV*
Ga0070678_1000557773	3300005456	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0070679_1015125432	3300005530	Corn Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0068853_1019558211	3300005539	Corn Rhizosphere	ITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0070686_1004730101	3300005544	Switchgrass Rhizosphere	MRLGERTCVVKVASALDAGAAQGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFECDEALALLLERPVEVSR*
Ga0068854_1021439382	3300005578	Corn Rhizosphere	ITSMRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQHPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV*
Ga0068861_1002673922	3300005719	Switchgrass Rhizosphere	MRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVEA*
Ga0066903_1029929251	3300005764	Tropical Forest Soil	VSAISSTRLGERTCVMSVPAALDHNAARSLEEGVDVELADGYRDFVLDFTAVRGCRDRRPTATLSRIAHRLRGERCEVVVAARHIDLLTFFDSVPSWSKLPLAHERDEALALLLERPVEM
Ga0068870_100386863	3300005840	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR*
Ga0068863_1006949643	3300005841	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR*
Ga0075432_104107003	3300006058	Populus Rhizosphere	VNGIVSTRLGERTCVIGVPAALDAVAARGLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLTRQGCGVVVAARHIDLLTFFDSVPSGSKLPLALERDEALA
Ga0079222_107714341	3300006755	Agricultural Soil	RRGSTARVNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR*
Ga0075428_1011937761	3300006844	Populus Rhizosphere	VNVITSMRLGERTCVVKVAAGLDAGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0075434_1004021552	3300006871	Populus Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0075424_1001037044	3300006904	Populus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVEVSR*
Ga0075436_1009110241	3300006914	Populus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDYEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVEVSR*
Ga0105251_100650743	3300009011	Switchgrass Rhizosphere	VNGITSTRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR*
Ga0105245_100230552	3300009098	Miscanthus Rhizosphere	VNCITSMRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0105245_103548552	3300009098	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0105247_100268573	3300009101	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR*
Ga0111538_110785283	3300009156	Populus Rhizosphere	VSAIISTRLGERTCVVEVAAALDDGAAERLVQRVDTAMADGCRDFVLDLTAVRGCRDRRPIAALSRLARRFAGEGCEVVVAARHVDLLAFLDSVPSFSKLPVALARDEALALLLERPVEAASP*
Ga0075423_100854043	3300009162	Populus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRLAGEECEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0105241_103112091	3300009174	Corn Rhizosphere	VNGITSTRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0105242_111839593	3300009176	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDE
Ga0105248_101137903	3300009177	Switchgrass Rhizosphere	VNGITSTRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVGV
Ga0105249_111063802	3300009553	Switchgrass Rhizosphere	VSSITSMRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEAL
Ga0126313_1000047410	3300009840	Serpentine Soil	VSTVTSRRLGERTCVVSVGAALDAPAARGLEEGVTSALADGCRDFVLDFTAVRGCRDRRPTAALSRIAHDFASHGCEVVVAACHVDLLTFFDSMPDWAHLPLAHERDEALALLLERPVEG
Ga0126313_107636081	3300009840	Serpentine Soil	VNGITSKRLGERTCIVSVPAALDGPAARRLEDGVSVAMADGYRDFVLDFTAVRGCRDRRPTATLARIAHRLVAHGCEVVVAARHVDLLTFFDSVPTWSKLPLALERDEALALLLERPVES
Ga0126312_104803942	3300010041	Serpentine Soil	VSSINSTRLGERTCVVTVPAALDAGAVGRLEDGIDAAMADGYRDFVLDFTAVRGCRDGHPTAALARIAHRLVDHGCEVVVAARHVDLLTFFDSVPTWSTLPVALERDEALALLLERPVEA
Ga0126310_108255073	3300010044	Serpentine Soil	VNTVTATRLGERTCVVSVPSGLDAPVALGLEDGVSTALADGYRDFVLDFTAVRGCRDRQPTAALARIARDMARHNCEVVVAARHIDLLTFFDSVPSWSELQLAHERDEALALLLER
Ga0134125_102002193	3300010371	Terrestrial Soil	VSAIESTRLGERTCVVSVPAALDAGAARRLEDGLNVAMEDGYRDFVLDFTAVRGCRDRRPTAALARIAHRLRGDGCEVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA
Ga0134128_106819292	3300010373	Terrestrial Soil	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0105239_127720321	3300010375	Corn Rhizosphere	MRLGERTCVVKVASALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVEA*
Ga0134122_111808862	3300010400	Terrestrial Soil	VSAIESTRLGERTCVVSVPAALDAGAARRLEDGLNVAMEDGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGRGDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVEA*
Ga0126317_106440112	3300011332	Soil	RLCERTCVMSVPAALNAVAARRLEDRVNAAMAEGYRDFVLDFTAVRGCRDRRPTPTLARIAHRLTGQGCDVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA*
Ga0150985_1045010192	3300012212	Avena Fatua Rhizosphere	VNGIVSTRLGERTCVLGVPAALDAGAARGLEDGVNVAMADGCRDFVLDFTAVHGCRDRRPTAALSRIAQGLAREGCDVVVAARHIDLLTFFDSVPSWSNLPLALERDEALALLLERPVET
Ga0150985_1127770602	3300012212	Avena Fatua Rhizosphere	VKAIESTRLGERTCVMCVPAALDAGAAKRLEDGVNLAMADGYRDFVLDFTAVRGCRDRRPTATLSRIAHGLTRHGCDVVVAARSIDLLTFFDSVPSWSRLPLAMERNEALALLLERPVEA
Ga0150984_1121405193	3300012469	Avena Fatua Rhizosphere	ESTRLGERTCVMKVPAALDAVAARDLEDRVNGEMADGCRDFVLDFTAVRGCRDRRPTATLARIAHRLTGCGCEVVVAARHIDLLTFFDSVPSWSKLPLALERDEALALLLERPVEA*
Ga0150984_1225717972	3300012469	Avena Fatua Rhizosphere	VSTRLGERTCVVSVPAGLDAGAAQGLEDGVNVAMADGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA*
Ga0164300_101791092	3300012951	Soil	VNPVTSTRLGERTCVVKVGALDAGAAERLEERVHTAMADGCRDFVLDLTAVDGCGDQRPIAALSRLAHRLAGGDCEVVVAACHVDLLTFLDSVPTFSKLPVALARDEALALLLERPVGVSR*
Ga0164309_100253373	3300012984	Soil	GERTCVVKVGALDAGAAERLEERVHTAMADGCRDFVLDLTAVDGCGDQRPIAALSRLAHRLAGGDCEVVVAACHVDLLTFLDSVPTFSKLPVALARDEALALLLERPVGVSR*
Ga0164308_100905602	3300012985	Soil	VNAITSTRLGERTCVVKVADALDAGAAERLEQRIDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR*
Ga0164307_104478642	3300012987	Soil	AITSTRLGERTCVVKVADALDAGAAERLEQRIDTAMADGCRDFVLDLTAVDGCGDQRPIAALSRLAHRLAGGDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEV*
Ga0157378_103947721	3300013297	Miscanthus Rhizosphere	KVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0163162_105361423	3300013306	Switchgrass Rhizosphere	VNCITSMRLGERTCVVKVAAGLDAGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0157375_107269901	3300013308	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVEA
Ga0157380_128577962	3300014326	Switchgrass Rhizosphere	ALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR*
Ga0182008_104773702	3300014497	Rhizosphere	MRLGERTCVVSVPAALDAGAARRLEDRVNVAMEDGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPA*
Ga0157377_100553253	3300014745	Miscanthus Rhizosphere	VNGITSMRLGERTCVVKVAAGLDAGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0157379_101415923	3300014968	Switchgrass Rhizosphere	VNCITSMRLGERTCVVKVAAGLDAGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR*
Ga0132258_122040353	3300015371	Arabidopsis Rhizosphere	VNAITSMRLGQRTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCADRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVELSR*
Ga0132256_1000501112	3300015372	Arabidopsis Rhizosphere	VNAITSMRLGERTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCADRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVEVSR*
Ga0132257_1001347953	3300015373	Arabidopsis Rhizosphere	VNAITSMRLGERTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVEVSR*
Ga0132255_1004806703	3300015374	Arabidopsis Rhizosphere	VNAITSMRLGERTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCCDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVEVSR*
Ga0207713_12542591	3300025735	Switchgrass Rhizosphere	VNGITSTRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFE
Ga0207710_100453283	3300025900	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR
Ga0207688_100343703	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0207688_103940202	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0207680_113141251	3300025903	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKVPVAFERDEALALLLERPVETSR
Ga0207643_100261463	3300025908	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR
Ga0207695_111625181	3300025913	Corn Rhizosphere	MRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQHPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0207657_113392512	3300025919	Corn Rhizosphere	TTARVNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0207652_116676672	3300025921	Corn Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPMAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAF
Ga0207687_104841962	3300025927	Miscanthus Rhizosphere	MRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0207644_100469333	3300025931	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSNLPVAFERDEALALLLERPVEVSR
Ga0207669_107946001	3300025937	Miscanthus Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEA
Ga0207689_100170835	3300025942	Miscanthus Rhizosphere	VNCITSMRLGERTCVVKVAAGLDDGAAERLEERVDRAMADGCRDFVLDLTAVDGCRDQRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVGV
Ga0207661_110927361	3300025944	Corn Rhizosphere	RRGTTARVNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0207712_117380992	3300025961	Switchgrass Rhizosphere	LDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0207668_113268531	3300025972	Switchgrass Rhizosphere	MRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVET
Ga0207677_105692211	3300026023	Miscanthus Rhizosphere	SAGRRGTRARVNGITSTRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR
Ga0207703_105761512	3300026035	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAQGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0207702_106332131	3300026078	Corn Rhizosphere	VNVITSMRLGERTCVVKVASALDTGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAL
Ga0207674_104717943	3300026116	Corn Rhizosphere	VNVITSMRLGERTCVVKVAAALDAGAAERLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR
Ga0207675_1003888961	3300026118	Switchgrass Rhizosphere	MRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVEA
Ga0268266_110194421	3300028379	Switchgrass Rhizosphere	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLP
Ga0307276_100015072	3300028705	Soil	VNGVTSTRLGERTCVVSVPAALDAGAARHLEDGVNVAMADGCRDFVLDFTAVRGCRDRRPTAALARIAHRLIGQECDVVVAARHIDLLTFFDSVPSWSKLPLAFERDEALALLLERPVGA
Ga0307288_101986212	3300028778	Soil	VNGVTSTRLGERTCVVSVPAALDAGAARHLEDGVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGQECDVVVAARHIDLLTFFDSVPSWSKLPLAFERDEALALLLERPVGA
Ga0247825_109179931	3300028812	Soil	VNVITSMRLGERTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLE
Ga0247827_113243001	3300028889	Soil	RTCVVKVASALDAGAAEGLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEECEVVVAACHVDLLTFLDSVPTFSKLPVAFERDEALALLLERPVETSR
Ga0247826_100034941	3300030336	Soil	MRLGERTCVVSVPAALDAGAARHLEDRVNVAMADGCRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERERK
Ga0307501_100574182	3300031152	Soil	VTSVVSTRLGERTCVVSVPAALDAGAARRLEDGVNVAMEDGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLIGHDDCAVVVAARHIDLLTFFDSVPSWSRLPLALERNEALALLLERPVE
Ga0307410_105235272	3300031852	Rhizosphere	VSTITATRLGERTCVVSVPAALDAPVALRLEEDVKTAMADGCRDFVLDFTAVRGCRDRQPTAALSRIAHGFARHGCEVVVAARHIDLLTFFDSVPRWSDLPLALERDEALALLLERPVER
Ga0307410_118225971	3300031852	Rhizosphere	VSPITSTRLGERTCVVSVPAALDAPAARGLEDGVNTALADGYRDFVLDFTAVRACRDRRPTAALARIADGFVAHGCEVIVAARHIDLLTYFDSVPSWSSLPLAHERDEALALLLERPVEG
Ga0307406_108170261	3300031901	Rhizosphere	VSTVTATRLGERTCVVSVRPALDAPAALSLEAGVNSALADGCRDFVLDFTAVRDCRDRKPTAALSRIAHGFARHGCEVVVAARHIDLLTFFDSVPRWSDLPLALERDEALALLLERPVER
Ga0307406_109717532	3300031901	Rhizosphere	VSVPGALDAPAARGLEDGVNTALADGYRDFVLDFTAVHGCRDRRPTAALARIADDFERHDCEVIVAARHIDLLTYFDSVPTWSKLPLALERDEALALLLERPVEA
Ga0310884_109601822	3300031944	Soil	MRLGERTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCRDRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEVSR
Ga0307409_1013309642	3300031995	Rhizosphere	VSTVTATRLGERTCVVSVRPALDAPAALSLEAGVNSALADGCRDFVLDFTAVRDCRDRKPTAALSRIAHGFARHGCDVVVAARHIDLLTFFDSVPDWSTLPLALEREEALALLLERPVGR
Ga0308176_103644102	3300031996	Soil	VRTGISSRRLGERTCVIGVPAALDAVAARSLEDGVNVAMADGCRDFVLDFTAVRGCRDRRPTAALARIAHRLTGHGCEVVVAARHIDLLTFFDSVPSWSKLPVALERDEALALLLERPVE
Ga0308176_113934022	3300031996	Soil	VSVIESTRLGERTCVVSVPAALDAGAARRLEDGLNVAMEDGYRDFVLDFTAVRGCRDRRPTAALSRIAHRLMGRDDCAVVVAARHIDLLTFFDSVPSWSKLPLALERNEALALLLERPVE
Ga0307416_1012137072	3300032002	Rhizosphere	VKSIVSTRLGERTCVMSVPAALDASAARGLEENLNVAMADGCRDFVLDFTAVRGCRDRRPTAALARIAHRLTGQGCEVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA
Ga0307416_1013754712	3300032002	Rhizosphere	VSPITSTRLGERTCVVSVPAALDAPAARGLEDGVNTALADGYRDFVLDFTAVRGCRDRRPTAALARIADGFVAHGCEVIVAARHIDLLTYFDSVPTWSKLPLALERDEALALLLERPVEG
Ga0307411_112393392	3300032005	Rhizosphere	VSTVTATRLGERTCVVSVRPALDAPAALSLEAGVNSALADGCRDFVLDFTAVRGCRDRQPTAALSRIAHGFARHGCEVVVAARHIDLLTFFDSVPSWSRLPLALERDEALALLLERPVEA
Ga0310906_104409703	3300032013	Soil	VNAITSMRLGERTCVVKVATALDAGAAEHLEERVDTAMADGCRDFVLDLTAVDGCADRRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEALALLLERPVEVSR
Ga0307470_118045932	3300032174	Hardwood Forest Soil	KVVAGLDAGAAERLEERVDSAMADGCRDFVLDLTAVDGCRDQRPIAALSRLAHRFAGEDCEVVVAACHVDLLTFLDSVPTFSKLPVALERDEAIALLLERPVEDSR
Ga0372943_0059570_551_916	3300034268	Soil	VRAGVTSTRLGERTCVVSAPPTLDAPAARRLEDGVNEALADGYRDFVLDFTAVRGCRDRRPTPALTRVARGLVAHRCGVVVAARHIDLLTFLDSVPSWSKLPLALERNEALALLLERPVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences