NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069880

Metagenome / Metatranscriptome Family F069880

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069880
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 84 residues
Representative Sequence MRIYVDFNTMTTDPKERVYINTQMQPDLAKDLCSGLVVTLYDEEMEVEAIVEFDEKDHVWLGQPNWSTRRDLPFPSSKDTRPV
Number of Associated Samples 95
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 87.80 %
% of genes near scaffold ends (potentially truncated) 17.89 %
% of genes from short scaffolds (< 2000 bps) 89.43 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (53.659 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.894 % of family members)
Environment Ontology (ENVO) Unclassified
(38.211 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.593 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.11%    β-sheet: 30.63%    Coil/Unstructured: 61.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF07883Cupin_2 5.69
PF00106adh_short 4.07
PF08028Acyl-CoA_dh_2 4.07
PF00202Aminotran_3 3.25
PF04255DUF433 2.44
PF13458Peripla_BP_6 2.44
PF13186SPASM 2.44
PF12680SnoaL_2 1.63
PF00884Sulfatase 1.63
PF03781FGE-sulfatase 0.81
PF01451LMWPc 0.81
PF03886ABC_trans_aux 0.81
PF08450SGL 0.81
PF00211Guanylate_cyc 0.81
PF02776TPP_enzyme_N 0.81
PF01764Lipase_3 0.81
PF01266DAO 0.81
PF13378MR_MLE_C 0.81
PF01797Y1_Tnp 0.81
PF05685Uma2 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 4.07
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 2.44
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.81
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.81
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.81
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.81
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.81
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A53.66 %
All OrganismsrootAll Organisms46.34 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0599894Not Available935Open in IMG/M
2228664022|INPgaii200_c0612921Not Available679Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101997082All Organisms → cellular organisms → Bacteria3061Open in IMG/M
3300000789|JGI1027J11758_12143239Not Available518Open in IMG/M
3300004463|Ga0063356_101607457Not Available968Open in IMG/M
3300004463|Ga0063356_102133475All Organisms → cellular organisms → Bacteria → Proteobacteria851Open in IMG/M
3300005181|Ga0066678_10631040Not Available713Open in IMG/M
3300005445|Ga0070708_101070970Not Available755Open in IMG/M
3300005447|Ga0066689_10940764Not Available533Open in IMG/M
3300005467|Ga0070706_100051297All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3807Open in IMG/M
3300005536|Ga0070697_101553760All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium592Open in IMG/M
3300005555|Ga0066692_10709916Not Available623Open in IMG/M
3300005559|Ga0066700_10328083All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300005598|Ga0066706_11216296Not Available572Open in IMG/M
3300005598|Ga0066706_11288320Not Available553Open in IMG/M
3300005764|Ga0066903_103043247Not Available908Open in IMG/M
3300005764|Ga0066903_103865002All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium804Open in IMG/M
3300005985|Ga0081539_10086657All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1629Open in IMG/M
3300005985|Ga0081539_10472527Not Available519Open in IMG/M
3300006049|Ga0075417_10015952All Organisms → cellular organisms → Bacteria2913Open in IMG/M
3300006797|Ga0066659_10299122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1227Open in IMG/M
3300006844|Ga0075428_100035567All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5490Open in IMG/M
3300006846|Ga0075430_100405971All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300006847|Ga0075431_101124689Not Available750Open in IMG/M
3300006852|Ga0075433_10457957All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300006853|Ga0075420_100648956Not Available910Open in IMG/M
3300006871|Ga0075434_101203116All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium770Open in IMG/M
3300006904|Ga0075424_100167663All Organisms → cellular organisms → Bacteria → Proteobacteria2328Open in IMG/M
3300007255|Ga0099791_10169197Not Available1025Open in IMG/M
3300009012|Ga0066710_100761084All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis1482Open in IMG/M
3300009038|Ga0099829_10102053All Organisms → cellular organisms → Bacteria2233Open in IMG/M
3300009038|Ga0099829_10661694Not Available868Open in IMG/M
3300009038|Ga0099829_11002345Not Available693Open in IMG/M
3300009088|Ga0099830_10215342All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300009089|Ga0099828_10043480All Organisms → cellular organisms → Bacteria3693Open in IMG/M
3300009090|Ga0099827_10547861All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300009090|Ga0099827_10872688All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300009137|Ga0066709_101371457All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300009147|Ga0114129_10870549All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1144Open in IMG/M
3300009168|Ga0105104_10751392Not Available563Open in IMG/M
3300009444|Ga0114945_10207488All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300009444|Ga0114945_10512096Not Available723Open in IMG/M
3300009691|Ga0114944_1013541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2747Open in IMG/M
3300009691|Ga0114944_1042006All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 11655Open in IMG/M
3300009691|Ga0114944_1081807All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300009691|Ga0114944_1093728Not Available1141Open in IMG/M
3300009691|Ga0114944_1161016Not Available884Open in IMG/M
3300009691|Ga0114944_1231190Not Available746Open in IMG/M
3300009792|Ga0126374_11659281All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium530Open in IMG/M
3300009821|Ga0105064_1122604Not Available545Open in IMG/M
3300010043|Ga0126380_10512450All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium924Open in IMG/M
3300010362|Ga0126377_10534862All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300010373|Ga0134128_12694315Not Available548Open in IMG/M
3300010391|Ga0136847_13380658Not Available557Open in IMG/M
3300012096|Ga0137389_10681717Not Available883Open in IMG/M
3300012096|Ga0137389_10697083All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300012189|Ga0137388_10562876Not Available1060Open in IMG/M
3300012201|Ga0137365_11174567All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300012204|Ga0137374_10351054Not Available1189Open in IMG/M
3300012204|Ga0137374_10731799Not Available740Open in IMG/M
3300012204|Ga0137374_10960268All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012211|Ga0137377_11687429Not Available555Open in IMG/M
3300012212|Ga0150985_100487739All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300012349|Ga0137387_10263509All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300012350|Ga0137372_10828749Not Available662Open in IMG/M
3300012351|Ga0137386_10072986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2397Open in IMG/M
3300012351|Ga0137386_10552496Not Available829Open in IMG/M
3300012351|Ga0137386_10614694Not Available782Open in IMG/M
3300012357|Ga0137384_11098784Not Available637Open in IMG/M
3300012359|Ga0137385_10436912All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300012360|Ga0137375_10273365All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300012361|Ga0137360_10210680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1578Open in IMG/M
3300012361|Ga0137360_10663832All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300012362|Ga0137361_11094480Not Available718Open in IMG/M
3300012469|Ga0150984_118793372Not Available572Open in IMG/M
3300012582|Ga0137358_10913046Not Available575Open in IMG/M
3300012685|Ga0137397_10265645Not Available1278Open in IMG/M
3300012918|Ga0137396_10424816Not Available985Open in IMG/M
3300012927|Ga0137416_10919415Not Available779Open in IMG/M
3300012948|Ga0126375_11455056Not Available583Open in IMG/M
3300017997|Ga0184610_1051700All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella1216Open in IMG/M
3300018056|Ga0184623_10126097Not Available1184Open in IMG/M
3300018063|Ga0184637_10031533All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella3212Open in IMG/M
3300018074|Ga0184640_10120040Not Available1156Open in IMG/M
3300018076|Ga0184609_10257625Not Available816Open in IMG/M
3300018077|Ga0184633_10197760All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella1039Open in IMG/M
3300018077|Ga0184633_10207511Not Available1011Open in IMG/M
3300018078|Ga0184612_10400115Not Available690Open in IMG/M
3300018082|Ga0184639_10175176All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1139Open in IMG/M
3300019233|Ga0184645_1284661Not Available633Open in IMG/M
3300019248|Ga0180117_1203813All Organisms → cellular organisms → Bacteria → Acidobacteria890Open in IMG/M
3300019257|Ga0180115_1196387Not Available519Open in IMG/M
3300020065|Ga0180113_1034969Not Available559Open in IMG/M
3300020067|Ga0180109_1053839Not Available614Open in IMG/M
3300021073|Ga0210378_10397000Not Available512Open in IMG/M
3300021357|Ga0213870_1211808Not Available571Open in IMG/M
3300022195|Ga0222625_1007828All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300022563|Ga0212128_10015373All Organisms → cellular organisms → Bacteria4907Open in IMG/M
3300022563|Ga0212128_10056011All Organisms → cellular organisms → Bacteria2544Open in IMG/M
3300022563|Ga0212128_10210895All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300022563|Ga0212128_10415981All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300022563|Ga0212128_10445440Not Available797Open in IMG/M
3300025910|Ga0207684_10292023Not Available1406Open in IMG/M
3300025910|Ga0207684_11640207Not Available520Open in IMG/M
3300025961|Ga0207712_11766119Not Available554Open in IMG/M
3300027846|Ga0209180_10343250Not Available852Open in IMG/M
3300027862|Ga0209701_10289776Not Available944Open in IMG/M
3300027873|Ga0209814_10034955All Organisms → cellular organisms → Bacteria2079Open in IMG/M
3300027875|Ga0209283_10090789All Organisms → cellular organisms → Bacteria → Proteobacteria1989Open in IMG/M
3300027880|Ga0209481_10108257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1347Open in IMG/M
3300027882|Ga0209590_10090474Not Available1808Open in IMG/M
3300027882|Ga0209590_10109732Not Available1662Open in IMG/M
3300027882|Ga0209590_10742161All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300028536|Ga0137415_10880409Not Available706Open in IMG/M
3300030006|Ga0299907_10218821All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300030619|Ga0268386_10718860Not Available649Open in IMG/M
3300031092|Ga0308204_10333870Not Available517Open in IMG/M
3300031093|Ga0308197_10109387All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300031114|Ga0308187_10448594Not Available520Open in IMG/M
3300031852|Ga0307410_10573981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium938Open in IMG/M
3300033417|Ga0214471_10155294Not Available1886Open in IMG/M
3300034177|Ga0364932_0316218Not Available590Open in IMG/M
3300034662|Ga0314783_160563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi526Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.89%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs10.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.32%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment5.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.06%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.25%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.63%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.63%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009691Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020065Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021357Freshwater microbial communities from subterranean cave lake in Wind Cave National Park, South Dakota, United States - WICALVC2017EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_059989422228664022SoilMALRIYVDFNTMTTDPQERVYINTHMQPELAERLRSGLVVTLFDEEMEVEARVEFDEQDYIWLGQPDWSTRRDLSSPNSKTHRPA
INPgaii200_061292122228664022SoilMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSSGQDTRLA
INPhiseqgaiiFebDRAFT_10199708223300000364SoilMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSSGQDTRLA*
JGI1027J11758_1214323923300000789SoilMALRIYVDFNTMTTDPQERVYINTHMQPELAERLRSGLVVTLFDEEMEVEARVEFDEQDYIWLGQPDWSTRRDLSSPNSKTHRPA*
Ga0063356_10160745713300004463Arabidopsis Thaliana RhizosphereMNMRLYVDFNTISTDPKDRIYINTHLHPALGQTLRPGLRVTLYDQEMEVHALVGFDEHDQVWLGRPDWSTRRDLSLPRHTEH*
Ga0063356_10213347523300004463Arabidopsis Thaliana RhizosphereMTVRLYVDFNTMAIDPKERVYINPHTQPVLMQELHPGLVVTLYDEEMEVEAVVEFDEHDRVWLGRPHWSTRRDLSLPTFYLKTLDADG*
Ga0066678_1063104023300005181SoilMVVRLYVDFNTMTTDPKERVYINTQLQPALAQDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDRPLQGTSGAH*
Ga0070708_10107097013300005445Corn, Switchgrass And Miscanthus RhizosphereMAIRIYVDFNTMTTDPKERVYINTPMQPDLAERLRSGLVVILFDEEMEVEAVLEFDEKDHIWLGQPDWSTRRDLSSLNSKTYRPV*
Ga0066689_1094076413300005447SoilMVVRLYVDFNTMTTDPKERVYINTQLQPALAQDLRPELAVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDRPLQGT
Ga0070706_10005129743300005467Corn, Switchgrass And Miscanthus RhizosphereMAIRIYVDFNTITTDPKDRVYINTRMHPALVQMLRPGLSVTLYDEEMEVEAVVEFDEHDQVWLGQPDWSTQRDLPLPSSTDTRPA*
Ga0070697_10155376013300005536Corn, Switchgrass And Miscanthus RhizosphereRIYVDFNTMTTDPKERVYINTHMQPDLTERLRSGLVVILFDEEMEVEAVLEFDEKDHIWLGQPDWSTRRDLSSLNSKTYRPV*
Ga0066692_1070991613300005555SoilMVVRLYVDFNTMTTDPKERVYINTQLQPALAQDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRR
Ga0066700_1032808333300005559SoilMEMRIYVDFNTMTIAPEEKVYLNMQMQPALEKDLRPGLVVTLCDEEMEVEAIVEFDEQNQAWLGQPNWSTHRDLPFPSSKDTSPP*
Ga0066706_1121629613300005598SoilMAIRIYVDFNTIATDSKERVHINTQVQPALAKNLHPGLVVTLYDEEMEVEALVEFDEHDRIWLGQPDWSTRRDLPLSSSQDTRLS*
Ga0066706_1128832013300005598SoilMRIYVDFNTMTTDPKERVYINTQMQPDLAKDLCSGLVVTLYDEEMEVEAIVEFDEKDHVWLGQPNWSTRRDLPFPSSKDTRPV*
Ga0066903_10304324723300005764Tropical Forest SoilMAVRLYVDFNTMAMDPKERVYINPHTQSALAQKLHPGLAVTLYDEEMEVEAIVEFNEHDHAWLGQPNWSTRRDLPLPNNIDTRPA*
Ga0066903_10386500223300005764Tropical Forest SoilMAVRLYVDFNTMAIDPKERAYIHPHTQPVLMQELHPGLVVTLYDEEMEVDAVVGFDEHDRAWLGQPNWSTRHDLPLPSSNNARPA*
Ga0081539_1008665723300005985Tabebuia Heterophylla RhizosphereMQMMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDRVWLGQPNWSTRRDLPLSSGQDTRLA*
Ga0081539_1047252723300005985Tabebuia Heterophylla RhizosphereMDMRLYVDFNTISTDPKDRIYINTHLHPALVQTLRPGLRVTLYDEEMEVQALVEFDEHDQAWLGRPDWSTRRDLSLPRHTEH*
Ga0075417_1001595223300006049Populus RhizosphereMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDRPLSSGQDTRLA*
Ga0066659_1029912223300006797SoilMAMRLYVDFNTMAIDPKERVYINPHTQRGLMQALHPGSVVTLYDEEMEVEAVVEFDEHDKAWLGQPNWSTRRDLSLPSNNDARPA*
Ga0075428_10003556733300006844Populus RhizosphereMAVRRYVDFNTMAIDPKERVYINAHTQPVLMQELHPGLVVTLYDEEMEVEAVVEFDEHDRAWLGQPNWSTRRDLPLPSNNNARPA*
Ga0075430_10040597123300006846Populus RhizosphereMEMRIYVDFNTTATDSKERVYINTQVQPALVRDLHPGLVVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSSGQATRRA*
Ga0075431_10112468923300006847Populus RhizosphereMEMRIYVDFNTTATDSKERVYINTQVQPALVRDLHPGLVVTLYDEEMEVEAIVEFDEHEHVWLGQPNWSTRRDLPLSSGQATRRA*
Ga0075433_1045795723300006852Populus RhizosphereMAIRIYVDFNTMTTDPKERVYINTHMQPDLTERLRSGLVVILFDEEMEVKAVLEFDEKDHTWLGQPDWSTRRDLSSLNSKTHRPV*
Ga0075420_10064895623300006853Populus RhizosphereMEMRIYVDFNTTATDSKERVYINTQVQPALVRDLHPGLVVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSSGQDTRRA*
Ga0075434_10120311613300006871Populus RhizosphereERVYINTPMQPDLAERLRSGLVVILFDEEMEVKAVLEFDEKDHTWLGQPDWSTRRDLSSLNSKTHRPV*
Ga0075424_10016766353300006904Populus RhizosphereMAVRRYVDFNTMAIDPKERVYINAHTQPVLMQELHPGLVVTLYDEEMEVEAVVEFDEHDRAWLGQPNWSTRRDLPLPSNNDARPA*
Ga0099791_1016919723300007255Vadose Zone SoilMAVRLYVDFNTMTMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDAR
Ga0066710_10076108433300009012Grasslands SoilMAIRIYVDFNTIATDSKERVYINTQVQPALAKNLHPGLVVTLYDEEMEVEALVEFDEHDRIWLGQPDWSTRRDLPLSSSQDTRLS
Ga0099829_1010205313300009038Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQPDLAKDLRSGLVVMLYDEEMEVEAIMEFDEKDRVWRGQPNWSTRRDLPFPSSKDTRPA*
Ga0099829_1066169423300009038Vadose Zone SoilKERVYINTQLQPALAQDLRPGIVVTLYDEEMEVDALVEFDEQEQVWLGQPHWSTRRDRPLQGTSGAH*
Ga0099829_1100234523300009038Vadose Zone SoilMRIYVDFNTMTTDPKERVYINTHMQSDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTEPA*
Ga0099830_1021534213300009088Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQSDLVKDLRSGLVVMLYDEEMEVEAIMEFDEKDRVWRGQPNWSTRRDLLFPSSKDTGPA*
Ga0099828_1004348063300009089Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQSDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTGPA*
Ga0099827_1054786123300009090Vadose Zone SoilMQIMQMRIYVDFNTTTTDSQERVYINTQVQPALEKDLYPGLTVTLYDEEMEVEAIVEFDEHGHVWLGQPNWSTRRDLPLSSGQDTRLV*
Ga0099827_1087268823300009090Vadose Zone SoilMAVRLYVDFNTMAMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDARSA*
Ga0066709_10137145723300009137Grasslands SoilMAIRIYVDFNTIATDSKERVHINTQVQPALAKNLHPGLVVTLYDEEMEVEALVEFDEHDRIWLGQPDWSTRRDLPLSSSQDTRLA*
Ga0114129_1087054923300009147Populus RhizosphereMAIRIYVDFNTMTTDPKERVYINTHMQPDLAERLRSGLVVILFDEEMEVKAVLEFDEKDHTWLGQPDWSTRRDLSSLNSKTHRPV*
Ga0105104_1075139213300009168Freshwater SedimentMDMRIYVDFNTISTDPKDRVCINTHLHTALVQTLRPGLRVTLYDEEMEVQALVEFDEHDQVWLGQPDWSTRRDLPLPSHTEN*
Ga0114945_1020748823300009444Thermal SpringsMIGENLMAVRLYVDFNTMTTDPKERVYINPHIHSALAQKLHPGLVVTLYDEEMEVEAVVEFDAHDQAWLGQPDWSTRRDLPLPSNNDARPA*
Ga0114945_1051209623300009444Thermal SpringsMVVRFYGDFNTMTTDPKERVSINTHLQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLAQPHWSTRRDLPWQEKSGSY*
Ga0114944_101354163300009691Thermal SpringsMNVRIYVDFNTSTTDPKERVYLNTHMHPTLAQDLRPGLIVTLYDEEMEVEASVEFDEQDQVWLGQPNWSTRRALSCPSSTDTNPA*
Ga0114944_104200633300009691Thermal SpringsMAIRIYVDFNTMTTDPKERVYINTRMQPDRAKDLRSGLVVTLYDEEMEVEAIVEFDEKDHTWLGQPDWSTRRDLSSLNSKDTGPA*
Ga0114944_108180723300009691Thermal SpringsMIGENLMAVRLYVDFNTMTTDPRERVYINPHTHSALAQKLHPGLVVTLYDEEMEVEAVVEFDEHDQAWLGQPNWSTRRELALPSNNDARPA*
Ga0114944_109372823300009691Thermal SpringsMAVRLYVDFNTMTTDPKERVSINTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEPNQVWLGQPHWSTRRDRPLQGKS*
Ga0114944_116101623300009691Thermal SpringsMPIRIYDDFNTMITDPKERVYINTHTQPDLAKDLRLGLVVTLYDEEMEVEASVEFDEKDHVWLGQPNWSTRRDLPFPRGKGTSPA*
Ga0114944_123119023300009691Thermal SpringsMVVRLYVDFNTMTSDPKERVSINTQIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDLPWQGKSGSH*
Ga0126374_1165928123300009792Tropical Forest SoilLEYVDFNPMVMASKKRVYINPHAQPVLIQELHTGLVVTLYNEEMKVGAVVEFDDHDRVWLGQPHWSTRRDLS*
Ga0105064_112260423300009821Groundwater SandMQIIQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVILYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSRGQDTRLA*
Ga0126380_1051245023300010043Tropical Forest SoilLEYIDFNPMVMASKKRVYINPHAQPVLIQELHTGLVVTLYNEEMKVGAVVEFDDHDRVWLGQPHWSTRRDLS*
Ga0126377_1053486223300010362Tropical Forest SoilMAVRLYVDFNTMTTDPKERVYISPHTHSALAQKLHPGLVVTLYDEEMEVDAVVELDEYDQAWLGQPDWSTRRDLPLPSDNDARPS*
Ga0134128_1269431513300010373Terrestrial SoilMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALAKDLHPGLTVTLYDEEMEVEAIVEFDEHEHVWLGQPNWSTRRDLPLSSGQDTR
Ga0136847_1338065823300010391Freshwater SedimentMVVRLYVDFNTMTTDPKDRVSINTQMQPALAQDLRPGLVVTLYDEEMEVDALVEFDERDRVWLGQPHWSTRRDPPWQEKSGSH*
Ga0137389_1068171723300012096Vadose Zone SoilMATRIYVDFNTMTTDPKESVYINTHIQPDLAKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTGPA*
Ga0137389_1069708323300012096Vadose Zone SoilMEMRIYVDFNTMAIDPKERVYLNTHMQPALEKDLRPGLVVTLCDEEMEVEAIVEFDEQDQAWLGQPNWSTRRDRPFPSSKDTSPP*
Ga0137388_1056287623300012189Vadose Zone SoilMATRIYVDFNTMTTDPKERVYINTHIQPDLAKDLRSGLVVMLYDEEMEVEAIMEFDEKDRVWRGQPNWSTRRDLPFPSSKDTRPA*
Ga0137365_1117456713300012201Vadose Zone SoilMAMRLYVDFNTMAIDPKERVYINPHTQLVPMQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDARSA*
Ga0137374_1035105413300012204Vadose Zone SoilMVVRLYVDFNTMTTDPKERVYINTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDLPWQEKSGSH*
Ga0137374_1073179913300012204Vadose Zone SoilMEESLIVARLYVDFNTMTTDPKARVYINTQIQPVLAQDLRPGLVVTLYDEEMEVAALVEFDQQDQVWLGQPYWSTRRDLPVQEKSGSH*
Ga0137374_1096026813300012204Vadose Zone SoilMAMRIYVDFNTMTTDPKERVSINTHIQPDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTR
Ga0137377_1168742913300012211Vadose Zone SoilMEMRIYVDFNTMTIAPEEKVYLNTQMQPALEKDLRPGLVVTLCDEEMEVEAIVEFDEQNQAWLGQPNWSTHR
Ga0150985_10048773923300012212Avena Fatua RhizosphereMQSMPMRIYVDFNTTATDSKERVYINTQVQPALEKDLYPGLTVTLYDEEMEVEAIVEFDEHGQVWLGQPNWSTRRDPPLSSGQDTRLV*
Ga0137387_1026350923300012349Vadose Zone SoilMEESLMAVRLYVDFNTMAMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQRNWSMRRDLPLPGNNDARSA*
Ga0137372_1082874913300012350Vadose Zone SoilMVVRLYVDFNTMTTDPKERVYINTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTHRDLPWQEKSGSH*
Ga0137386_1007298623300012351Vadose Zone SoilMRIYVDFNTMTTDPKERVYINTQMQPDLAKDLCSGLVVTLYDEEMEVEAIVEFDEKDHVWLGQPNWSTRRDLPFPSSKDTSPP*
Ga0137386_1055249623300012351Vadose Zone SoilMVVRLYVDFNTMTTDPKERVYINTQLQPALEQDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDRPLQGTSGAH*
Ga0137386_1061469423300012351Vadose Zone SoilMAIRIYVDFNTIATDSKERVYINTQVQPALAKNLHPGLVVTLYDEEMEVEALVEFDEHDRIWLGQPDWSTRRDLPLSSSQDTRLA*
Ga0137384_1109878413300012357Vadose Zone SoilGGIHKMRIYVDFNTMTTDPKERVYINTRMQPDLAKDLCSGLVVTLYDEEMEVEAIVEFDEKDHVWLGQPNWSTRRDLPFPSSKDTRPV*
Ga0137385_1043691223300012359Vadose Zone SoilAIRIYVDFNTIATDSKERVHINTQVQPALAKRLHPGLVVTLYDEEMEVEALVEFDEHDRIWLGQPDWSTRRDLPLSSSQDTRLA*
Ga0137375_1027336533300012360Vadose Zone SoilMAMRIYVDFNTMTTDPKERVSINTHIQPDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTRPA*
Ga0137360_1021068023300012361Vadose Zone SoilMAVRLYVDFNTMTMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDARSA*
Ga0137360_1066383223300012361Vadose Zone SoilDFNTTTTDSKERVYINTQVQPALAKDLHPGLTVTLYDEEMEVEAIVGFDEHDHIWLGQPNWSTRRDLPLSSGQDTRLA*
Ga0137361_1109448013300012362Vadose Zone SoilMRIYVDFNTMTTDPKERVYINTQMQPDLAKDLCSGLVVTLYDEEMEVEAIVEFDEKDHVWLGQPNWSTRRDLPFPSSKDTRPV
Ga0150984_11879337223300012469Avena Fatua RhizosphereMQSMPMRIYVDFNTTATDSKERVYINTQVQPALEKALHPGLIVTLYDEEMEVEAIAEFDAHGHVWLGQPNWSTRRDLPLSNGQDTRLA*
Ga0137358_1091304613300012582Vadose Zone SoilMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVGFDEHDHIWLGQPNWSTRRDLPLSSGQDTRLA*
Ga0137397_1026564523300012685Vadose Zone SoilMAVRLYVDFNTMTTDPKERVSINTHIQPALAKDLRPGLIVTLYDEEMEVDALVEFDEQDQVWLAQPHWWTRRDLPLQEKSGSH*
Ga0137396_1042481623300012918Vadose Zone SoilMGMRIYIDFNTIAIDSKERVYINTQVQPALEKDLQPGLTVTLYDEEMEVEAIVEFDVHDHVWLGQPNWSTRRDLPLSSGQDPRLA*
Ga0137416_1091941523300012927Vadose Zone SoilMGMRIYIDFNTIAMDSKERVYINTQVQPALEKDLQPGLTVTLYDEEMEVEAIVEFDVHEHVWLGQPNWSTRRDLPLSSGQDPRLA*
Ga0126375_1145505613300012948Tropical Forest SoilMPVRLYVDFNTMAMDPKERVYINSHTQPALTQDLHTGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDARSA*
Ga0184610_105170023300017997Groundwater SedimentVKMQIYVDFNTMTTDPKERVYINTHMQPDLAKDLCPGLVVALYDEEMEVEALVEFDEQDQVWLGQPNWSTRRDLALPSSKDTRPV
Ga0184623_1012609733300018056Groundwater SedimentMVVRLYVDFNTMTTDPRERVYINTQIQPALAKDLRPGLIVTLYDEEMEVDALVEFDEQDQVWLAQPHWWTRRDLPWQEKSGSQ
Ga0184637_1003153323300018063Groundwater SedimentVKMRIYVDFNTMTTDPKERVYINTHMQPDLAKDLCPGLVVALYDEEMEVEALVEFDEQDQVWLGQPNWSTRRDLALPSSKDTRPV
Ga0184640_1012004023300018074Groundwater SedimentMKMRIYVDFNTMTTDPKERVYINTHLQPDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKGRVWRGQPNWSTRRDLPFLSSKDTRPA
Ga0184609_1025762523300018076Groundwater SedimentMVVRLYVDFNTMTTDPKERVSINTHLQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLAQPHWSTRRDLPWQGKSGSH
Ga0184633_1019776023300018077Groundwater SedimentSPEDPKERVYINTHRQLALAQDLRLGLVVALYDKEMEVEALGEFDEQDQVWLGQPNWSTRRDLALPSSKDTRPV
Ga0184633_1020751113300018077Groundwater SedimentMVVRLYVDFNTMTTDPKERVSINTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDLPLQEKSGSH
Ga0184612_1040011513300018078Groundwater SedimentMVVRLYVDFNTMATDPKERDSINTHLQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDLPLQGKSGSH
Ga0184639_1017517613300018082Groundwater SedimentVKMRIYVDFNTMTTDPKERVYINTHMQPDLAKDLCPGLVVALYDEKMEVEALVEFDEQDQVWLGQPNWSTRRDLALPSSKDTRPV
Ga0184645_128466113300019233Groundwater SedimentMVVRLYVDFNTMITDPKGRVSINTHIQPALAKDLRPGLIVTLYDEEMEVDALVEFDEQDQVWLAQPHWWTRRDLPWQEKSGSQ
Ga0180117_120381323300019248Groundwater SedimentMGMRIYVDFNTIATDSKERVYINTQVQPALEKALHPGLIVTLYDEEMEVEAIAEFDACDHVWLGQPNWSTRRDLPLSHGQDTRLA
Ga0180115_119638713300019257Groundwater SedimentMRIYVDFNTISTDPKDRVCINTHLHPALVQTLRPGLRVTLYDEEMEVQALVDFDEHDQVWLGQPDWSTRRDLPLPSHTENW
Ga0180113_103496913300020065Groundwater SedimentMEMRIYVDFNTTAIDVKERVAIPTQMQPALAQALRPGMVVTLYDEEMEVRATLEFNAHDQVWLGQPHWSTRRELPSLSGQDA
Ga0180109_105383923300020067Groundwater SedimentMDMRIYVDFNTISTDPKDRVCINTHLHPALVQTLRPGLRVTLYDEEMEVQALVDFDEHDQVWLGQPDWSTR
Ga0210378_1039700013300021073Groundwater SedimentMVVRLYVDFNTMTTDPRERVYINTQIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDRVWLGQPHWSTRRDLPLQGKSGSH
Ga0213870_121180823300021357FreshwaterMAMRIYVDFNTMTTDPKERVYINTNIRPDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPHWSTRRDLPFPSSKDTRPA
Ga0222625_100782823300022195Groundwater SedimentMAVRLYVDFNTMAMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLLLPGNNDARSA
Ga0212128_1001537323300022563Thermal SpringsMAIRIYVDFNTMTTDPKERVYINTRMQPDRAKDLRSGLVVTLYDEEMEVEAIVEFDEKDHTWLGQPDWSTRRDLSSLNSKDTGPA
Ga0212128_1005601163300022563Thermal SpringsMNVRIYVDFNTSTTDPKERVYLNTHMHPTLAQDLRPGLIVTLYDEEMEVEASVEFDEQDQVWLGQPNWSTRRALSCPSSTDTNPA
Ga0212128_1021089523300022563Thermal SpringsMAVRLYVDFNTMTTDPRERVYINPHTHSALAQKLHPGLVVTLYDEEMEVEAVVEFDEHDQAWLGQPNWSTRRELALPSNNDARPA
Ga0212128_1041598123300022563Thermal SpringsLYVDFNTMTTDPKERVYINPHTHSALAQKLHPGLVVTLYDEEMEVEAVVEFDAHDQAWLGQPDWSTRRDLPLPSNNDASPA
Ga0212128_1044544013300022563Thermal SpringsMAVRLYVDFNTMTTDPKERVSINTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEPNQVWLGQPHWSTRRDRPLQGKS
Ga0207684_1029202323300025910Corn, Switchgrass And Miscanthus RhizosphereMAIRIYVDFNTITTDPKDRVYINTRMHPALVQMLRPGLSVTLYDEEMEVEAVVEFDEHDQVWLGQPDWSTQRDLPLPSSTDTRPA
Ga0207684_1164020723300025910Corn, Switchgrass And Miscanthus RhizosphereMAIRIYVDFNTMTTDPKERVYVNTHMQPDLAEDLRSGLVVTLYDEEMEVEAVLEFDEKDHIWLGQPDWSTRRDLSSLNSKTYRPV
Ga0207712_1176611913300025961Switchgrass RhizosphereMAVRLYVDFNTMAIDPKERVYINAHTQPVLMQELHPGLVVTLYDEEMEVEAIVEFDKHDRAWLGQPNWSTRRDLPLPSNNNARPA
Ga0209180_1034325023300027846Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQPDLAKDLRSGLVVMLYDEEMEVEAIMEFDEKDRVWRGQPNWSTRHDLPFPSSKDTRPA
Ga0209701_1028977623300027862Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQSDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDT
Ga0209814_1003495523300027873Populus RhizosphereMQIMQMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDRPLSSGQDTRLA
Ga0209283_1009078923300027875Vadose Zone SoilMAMRIYVDFNTMTTDPKERVYINTHIQSDLVKDLRSGLVVMLYDEEMEVEAIVEFDEKDRVWRGQPNWSTRRDLPFPSSKDTGPA
Ga0209481_1010825723300027880Populus RhizosphereMAVRRYVDFNTMAIDPKERVYINAHTQPVLMQELHPGLVVTLYDEEMEVEAVVEFDEHDRAWLGQPNWSTRRDLPLPSNNNARPA
Ga0209590_1009047433300027882Vadose Zone SoilMEMRIYVDFNTMAIDPKERVYLNTHMQPALEKDLRPGLVVTLCDEEMEVEAIVEFDEQDQAWLGQPNWSTRRDRPFPSSKDTSST
Ga0209590_1010973223300027882Vadose Zone SoilMVVRLYVDFNTMTTDPKERVYINTQLQPALAQDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDRPLQGTSGAH
Ga0209590_1074216123300027882Vadose Zone SoilMAVRLYVDFNTMAMDPKARVSINPHMQPVLTQELHPGLVVTLYDEEMEVEAVVEFDEHDHTWLGQPNWSMRRDLPLPGNNDARSA
Ga0137415_1088040913300028536Vadose Zone SoilMGMRIYIDFNTIATDSKERVYINTQVQPALEKDLQPGLTVTLYDEEMEVEAIVEFDVHEHVWLGQPNWSTRRDLPLSSGQDPRLA
Ga0299907_1021882133300030006SoilMAMRLYVDFNTMTIDAKERVYINPRMQPALAKDLRPGLVVTLYDEEMEVEAIVEFDEYVDAWLGQPNWST
Ga0268386_1071886023300030619SoilMAMRLYVDFNTMTIDAKERVYINPRMQPALAKDLRPGLVVTLYDEEMEVEAIVEFDEYVDAWLGQPNWSTRRDLPLPSNSDTRPA
Ga0308204_1033387023300031092SoilMDMRLYVDFNTISTDPKDRIYINTHLHPALVQTLRPGLRVTLYDEEMEVQALVEFDEHDQVWLGRPDWSTRRDLSLPRHIEH
Ga0308197_1010938713300031093SoilMQSMPMRIYVDFNTTATDSKERVYINTQVQPALEKALHPGLIVTLYDEEMEVEAIAEFDAHGHVWLGQPNWSTRRDLPLSNGQDTRLA
Ga0308187_1044859413300031114SoilMQIMQMRIYVDFNTTTTDSKERVYINTQLQPALEKALHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSNGQDTRLA
Ga0307410_1057398113300031852RhizosphereLMTMRLYVDFNTMAIDPRERVYINPHTQPVLMKELHPGLVVTLYDEEMEVEAVVEFDEHDKVWLGQPHWSTRRDLSLPSNNDARPA
Ga0214471_1015529413300033417SoilMVVRFYVDFNTMTTDPKERVSINTHIQPALAKDLRPGLVVTLYDEEMEVDALMEFDEQDQVWLAQPHWSTRRDLPWQEKSGSH
Ga0364932_0316218_303_5543300034177SedimentMVVRLYVDFNTMTTDPKERVSNNTHIQPALAKDLRPGLVVTLYDEEMEVDALVEFDEQDQVWLGQPHWSTRRDLPLQEKSGSH
Ga0314783_160563_270_5213300034662SoilMRIYVDFNTTTTDSKERVYINTQVQPALEKDLHPGLTVTLYDEEMEVEAIVEFDEHDHVWLGQPNWSTRRDLPLSSGQDTRLA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.