Metagenome Family F069862

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069862
Family Type	Metagenome
Number of Sequences	123
Average Sequence Length	69 residues
Representative Sequence	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Number of Associated Samples	77
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.33 %
% of genes near scaffold ends (potentially truncated)	41.46 %
% of genes from short scaffolds (< 2000 bps)	87.80 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.764 % of family members)
Environment Ontology (ENVO)	Unclassified (38.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.41% β-sheet: 26.53% Coil/Unstructured: 53.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF09361	Phasin_2	7.32
PF04392	ABC_sub_bind	1.63
PF06411	HdeA	1.63
PF01135	PCMT	1.63
PF01925	TauE	0.81
PF07568	HisKA_2	0.81
PF13783	DUF4177	0.81
PF14295	PAN_4	0.81
PF04430	DUF498	0.81
PF04286	DUF445	0.81
PF00005	ABC_tran	0.81
PF00528	BPD_transp_1	0.81
PF00248	Aldo_ket_red	0.81
PF00313	CSD	0.81
PF00672	HAMP	0.81
PF02796	HTH_7	0.81
PF01176	eIF-1a	0.81
PF13649	Methyltransf_25	0.81
PF06863	DUF1254	0.81
PF14065	Pvc16_N	0.81
PF13185	GAF_2	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.63
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.63
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.63
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.63
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.63
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.81
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.81
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.81
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.81
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.81
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.81
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.81
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
All Organisms	root	All Organisms	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
cellular organisms	root	All Organisms → cellular organisms	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.33 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.63 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.50 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.44 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.63 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.44 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	2.44 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.54 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.44 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1030157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10010971	Not Available	2502	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1078827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300003505\|JGIcombinedJ51221_10430620	Not Available	534	Open in IMG/M
3300005175\|Ga0066673_10326156	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	896	Open in IMG/M
3300005332\|Ga0066388_100451760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1926	Open in IMG/M
3300005332\|Ga0066388_100939590	Not Available	1437	Open in IMG/M
3300005332\|Ga0066388_102150973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1005	Open in IMG/M
3300005332\|Ga0066388_102936122	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005332\|Ga0066388_104719610	Not Available	693	Open in IMG/M
3300005332\|Ga0066388_106183461	Not Available	604	Open in IMG/M
3300005332\|Ga0066388_107047516	Not Available	565	Open in IMG/M
3300005554\|Ga0066661_10056130	All Organisms → cellular organisms → Bacteria → Proteobacteria	2266	Open in IMG/M
3300005764\|Ga0066903_101092889	Not Available	1469	Open in IMG/M
3300005764\|Ga0066903_101106373	Not Available	1461	Open in IMG/M
3300005764\|Ga0066903_101114686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1456	Open in IMG/M
3300005764\|Ga0066903_105256175	Not Available	685	Open in IMG/M
3300005764\|Ga0066903_108311740	Not Available	530	Open in IMG/M
3300006046\|Ga0066652_101178098	Not Available	726	Open in IMG/M
3300006102\|Ga0075015_100049860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1978	Open in IMG/M
3300006800\|Ga0066660_11386292	Not Available	551	Open in IMG/M
3300006804\|Ga0079221_11068486	Not Available	614	Open in IMG/M
3300009792\|Ga0126374_11101078	Not Available	630	Open in IMG/M
3300010046\|Ga0126384_11515506	Not Available	629	Open in IMG/M
3300010048\|Ga0126373_12755707	Not Available	549	Open in IMG/M
3300010162\|Ga0131853_10957022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300010358\|Ga0126370_10384197	Not Available	1147	Open in IMG/M
3300010358\|Ga0126370_11217158	Not Available	701	Open in IMG/M
3300010358\|Ga0126370_11399110	Not Available	660	Open in IMG/M
3300010359\|Ga0126376_10744538	Not Available	949	Open in IMG/M
3300010359\|Ga0126376_11792576	Not Available	651	Open in IMG/M
3300010359\|Ga0126376_12709040	Not Available	545	Open in IMG/M
3300010360\|Ga0126372_12396266	Not Available	578	Open in IMG/M
3300010366\|Ga0126379_11113776	Not Available	895	Open in IMG/M
3300010366\|Ga0126379_12677587	Not Available	596	Open in IMG/M
3300010376\|Ga0126381_101941084	Not Available	849	Open in IMG/M
3300010376\|Ga0126381_104095879	Not Available	566	Open in IMG/M
3300010376\|Ga0126381_105133514	Not Available	501	Open in IMG/M
3300010398\|Ga0126383_10544557	Not Available	1225	Open in IMG/M
3300010398\|Ga0126383_10915898	Not Available	963	Open in IMG/M
3300010398\|Ga0126383_11493412	Not Available	765	Open in IMG/M
3300012198\|Ga0137364_10403004	Not Available	1024	Open in IMG/M
3300012199\|Ga0137383_11183188	Not Available	550	Open in IMG/M
3300012207\|Ga0137381_10401831	Not Available	1195	Open in IMG/M
3300012207\|Ga0137381_10568017	Not Available	989	Open in IMG/M
3300012207\|Ga0137381_10743513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300012208\|Ga0137376_11088833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300012210\|Ga0137378_11285699	Not Available	648	Open in IMG/M
3300012349\|Ga0137387_11293525	Not Available	510	Open in IMG/M
3300012356\|Ga0137371_10520998	Not Available	917	Open in IMG/M
3300012948\|Ga0126375_10139328	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300012971\|Ga0126369_10857397	Not Available	992	Open in IMG/M
3300012971\|Ga0126369_11879827	Not Available	687	Open in IMG/M
3300012971\|Ga0126369_13247526	Not Available	533	Open in IMG/M
3300016270\|Ga0182036_10231813	Not Available	1372	Open in IMG/M
3300016270\|Ga0182036_10281323	Not Available	1258	Open in IMG/M
3300016294\|Ga0182041_11724883	Not Available	580	Open in IMG/M
3300016341\|Ga0182035_10564725	Not Available	979	Open in IMG/M
3300016341\|Ga0182035_10981417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	748	Open in IMG/M
3300016371\|Ga0182034_10000393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19858	Open in IMG/M
3300016371\|Ga0182034_10786548	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300016371\|Ga0182034_11780230	Not Available	543	Open in IMG/M
3300016404\|Ga0182037_10567356	Not Available	959	Open in IMG/M
3300016422\|Ga0182039_10258800	Not Available	1422	Open in IMG/M
3300016445\|Ga0182038_10415726	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300016445\|Ga0182038_10991644	Not Available	743	Open in IMG/M
3300016445\|Ga0182038_11145538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	692	Open in IMG/M
3300017822\|Ga0187802_10001622	All Organisms → cellular organisms → Bacteria → Proteobacteria	6128	Open in IMG/M
3300017822\|Ga0187802_10009739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	3074	Open in IMG/M
3300017823\|Ga0187818_10016421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3162	Open in IMG/M
3300017924\|Ga0187820_1039711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1246	Open in IMG/M
3300017928\|Ga0187806_1017802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2037	Open in IMG/M
3300017937\|Ga0187809_10309506	Not Available	584	Open in IMG/M
3300017970\|Ga0187783_10967369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300017970\|Ga0187783_11374564	Not Available	509	Open in IMG/M
3300018433\|Ga0066667_11093987	Not Available	690	Open in IMG/M
3300021560\|Ga0126371_10210692	Not Available	2043	Open in IMG/M
3300021560\|Ga0126371_10408658	Not Available	1500	Open in IMG/M
3300021560\|Ga0126371_10950642	Not Available	1002	Open in IMG/M
3300021560\|Ga0126371_11184050	Not Available	901	Open in IMG/M
3300021560\|Ga0126371_11429211	Not Available	822	Open in IMG/M
3300021560\|Ga0126371_12131228	Not Available	676	Open in IMG/M
3300026909\|Ga0207858_1022536	Not Available	602	Open in IMG/M
3300026959\|Ga0207852_1003553	Not Available	1836	Open in IMG/M
3300027680\|Ga0207826_1000358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13038	Open in IMG/M
3300027680\|Ga0207826_1048318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1180	Open in IMG/M
3300031231\|Ga0170824_105941336	Not Available	1657	Open in IMG/M
3300031231\|Ga0170824_106079241	Not Available	687	Open in IMG/M
3300031231\|Ga0170824_125922402	Not Available	541	Open in IMG/M
3300031446\|Ga0170820_15839945	Not Available	824	Open in IMG/M
3300031545\|Ga0318541_10009475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4324	Open in IMG/M
3300031545\|Ga0318541_10604841	Not Available	613	Open in IMG/M
3300031545\|Ga0318541_10774066	Not Available	535	Open in IMG/M
3300031546\|Ga0318538_10083719	Not Available	1624	Open in IMG/M
3300031546\|Ga0318538_10111552	Not Available	1422	Open in IMG/M
3300031564\|Ga0318573_10753866	Not Available	523	Open in IMG/M
3300031572\|Ga0318515_10715847	Not Available	529	Open in IMG/M
3300031573\|Ga0310915_10596470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300031679\|Ga0318561_10417208	Not Available	738	Open in IMG/M
3300031719\|Ga0306917_11299398	Not Available	563	Open in IMG/M
3300031747\|Ga0318502_10919031	Not Available	532	Open in IMG/M
3300031771\|Ga0318546_10538047	Not Available	820	Open in IMG/M
3300031796\|Ga0318576_10357651	Not Available	690	Open in IMG/M
3300031879\|Ga0306919_10000332	All Organisms → cellular organisms → Bacteria	20049	Open in IMG/M
3300031912\|Ga0306921_10333001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1776	Open in IMG/M
3300031912\|Ga0306921_10806577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300031942\|Ga0310916_10399172	Not Available	1170	Open in IMG/M
3300031945\|Ga0310913_10693698	Not Available	720	Open in IMG/M
3300031945\|Ga0310913_11255186	Not Available	515	Open in IMG/M
3300031954\|Ga0306926_10859146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1089	Open in IMG/M
3300031954\|Ga0306926_11203894	Not Available	890	Open in IMG/M
3300032025\|Ga0318507_10494476	Not Available	532	Open in IMG/M
3300032052\|Ga0318506_10071804	Not Available	1439	Open in IMG/M
3300032059\|Ga0318533_10453617	Not Available	938	Open in IMG/M
3300032063\|Ga0318504_10219907	Not Available	890	Open in IMG/M
3300032076\|Ga0306924_10034626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5511	Open in IMG/M
3300032076\|Ga0306924_10848133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300032091\|Ga0318577_10518544	Not Available	568	Open in IMG/M
3300032261\|Ga0306920_101917524	Not Available	832	Open in IMG/M
3300033289\|Ga0310914_10221096	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300033290\|Ga0318519_10053545	Not Available	2027	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.50%
Aquatic	Environmental → Aquatic	5.69%
Arthropoda	Host-Associated → Arthropoda	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.50%
Freshwater	Environmental → Aquatic → Freshwater	4.88%
Sediment	Environmental → Aquatic → Sediment	0.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.42%
Loam	Environmental → Terrestrial → Soil → Loam	14.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.44%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.44%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10301572	3300000580	Forest Soil	MKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPRDDIKVCEITEESNGRNSLALT*
AF_2010_repII_A1DRAFT_100109712	3300000597	Forest Soil	MKNGIATYGSLAHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
AF_2010_repII_A100DRAFT_10788271	3300000655	Forest Soil	KNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPRDDIKVCEITEESNGRNSLALT*
JGIcombinedJ51221_104306201	3300003505	Forest Soil	MGCLMKNGIATNNNLSREYFVIQINGRTDSIHRRYEDAVRAGLLLKNQFPHVDIKVC
Ga0066673_103261561	3300005175	Soil	MGCLMKNGIATYGSLPHDYLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQQGTVLH*
Ga0066388_1004517604	3300005332	Tropical Forest Soil	MGCLTKNGIATYGSLPHDYYVLKINGRANSIHRHYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTALH*
Ga0066388_1009395902	3300005332	Tropical Forest Soil	MKNGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH*
Ga0066388_1021509731	3300005332	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIYRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0066388_1029361221	3300005332	Tropical Forest Soil	MKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTV
Ga0066388_1047196101	3300005332	Tropical Forest Soil	MKNGIATYGRLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0066388_1061834612	3300005332	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0066388_1070475162	3300005332	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTV
Ga0066661_100561304	3300005554	Soil	MGCFMQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVTEEAKQDTAVH*
Ga0066903_1010928894	3300005764	Tropical Forest Soil	MKNGIAAHGSLSHDYYVLKINGRGNSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVLQGTVLH*
Ga0066903_1011063732	3300005764	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPDDDIKVCEITEEVMQGTVLH*
Ga0066903_1011146862	3300005764	Tropical Forest Soil	MGLLPRGAVTMGCLMNNGIATYGSISHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0066903_1052561752	3300005764	Tropical Forest Soil	MGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH*
Ga0066903_1083117402	3300005764	Tropical Forest Soil	MKNGIATDGSLPHDYYVLKINGRASSIHRRDEDAVREGLLLRYQFPHDDIKVCEITEEVMQGTALH*
Ga0066652_1011780981	3300006046	Soil	MGCVMTNGIATYGSLPHEYYVLKMNGRIKSIHRRYQDALRAGLLLKNQFPHDDIKVWEVTEEAKQD
Ga0075015_1000498603	3300006102	Watersheds	PKLLGVGECFRAVSRSVVMGCLMKNGIATYSSLSHEHYVLKINGRTNSIHRRYGDALRAGLLLRYRFPHDDIKVCEITEEVMQGTVLH*
Ga0066660_113862921	3300006800	Soil	MGCFMQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVTEEAKQDTALH*
Ga0079221_110684861	3300006804	Agricultural Soil	MKHGIATESSVSHEYFVLQVNGRISSAHRRYQDALRAGLQLKYQFPHDDIKVQEVASEQIAPETGWH
Ga0126374_111010782	3300009792	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYASKSTGVLIRYIDVMALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0126384_115155062	3300010046	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGSVLH*
Ga0126373_127557071	3300010048	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDAMREGLLLRYQFPHDDIKVCEITEEVMQGT
Ga0131853_109570221	3300010162	Termite Gut	GQLMGCLMKNGIATHGLPHEYYVLVVNGHVSSTHRRYGDAVREGLLLKYQFPDHDIKVREINSTEESGTVLH*
Ga0126370_103841971	3300010358	Tropical Forest Soil	MKNGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTV
Ga0126370_112171581	3300010358	Tropical Forest Soil	MKNGIATYGSLAHDYYVLKINGRANSIHQRYEDALREGLLLRYQFPRDDIKVCEITEEVMQGTALH*
Ga0126370_113991101	3300010358	Tropical Forest Soil	MGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0126376_107445383	3300010359	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRHYEDALREGLLLRYQFPHDDIKVCEITEEV
Ga0126376_117925761	3300010359	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIYRRYEDALRKGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0126376_127090402	3300010359	Tropical Forest Soil	MGCLMNNGIATYGSISHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0126372_123962661	3300010360	Tropical Forest Soil	MVCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0126379_111137762	3300010366	Tropical Forest Soil	HRRVACRVTVSRGAVTMGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0126379_126775872	3300010366	Tropical Forest Soil	VGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMPGTVLH*
Ga0126381_1019410842	3300010376	Tropical Forest Soil	MGGLMKNGIATYGSLSHEYHVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH*
Ga0126381_1040958791	3300010376	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRHYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTALH*
Ga0126381_1051335141	3300010376	Tropical Forest Soil	SPSSGVPSKQCLGRVVGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMPGTVLH*
Ga0126383_105445572	3300010398	Tropical Forest Soil	VSRGAVTMGCLMNNGIATYGSISHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0126383_109158982	3300010398	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINDRANSIHRRYEDVLREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0126383_114934121	3300010398	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITQEVMQGTVLH*
Ga0137364_104030042	3300012198	Vadose Zone Soil	MKNGIATYGSLSHEYYVLKINGRTNSIHRRYQDALKAGLLLKNQFPHDDIKVWEITEEAKQDTVLH*
Ga0137383_111831881	3300012199	Vadose Zone Soil	MQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVIEEAQQDTALH*
Ga0137381_104018312	3300012207	Vadose Zone Soil	MGCVMTNGIATYGSLPHEYYVLKMNGRINSIHRRYQDALRAGLLLKNQFPHDDIKVWEVTEEAKQDTVLH*
Ga0137381_105680171	3300012207	Vadose Zone Soil	MKNGIATYGSLSHEYYVLKINGRTNSIHRRYQDALKAGLLLKNQFPHDDIKVWEITEEAKQDTVL
Ga0137381_107435133	3300012207	Vadose Zone Soil	MSSEQCLGGNLMGCLMKNGIATNDSLSREYFVLQINGRTDSIHRRYGDVVRAGLLLKYEFPHMDI
Ga0137376_110888332	3300012208	Vadose Zone Soil	MQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVTEEAKQD
Ga0137378_112856991	3300012210	Vadose Zone Soil	MTNGIATYGSLSHEYYVLKINGRTESIHRRYQDALRAGLLLKNQFPHDDIKVWEVTEEAKQDAVLH*
Ga0137387_112935251	3300012349	Vadose Zone Soil	MQNGIATYSSLSHEYYVLKINGRANSIHRRDEDALREGLLLKNQFPHDDIKVYEVIEE
Ga0137371_105209981	3300012356	Vadose Zone Soil	MKNGIATYGSLSHAYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVCEITEEVMEETVLH*
Ga0137384_115887431	3300012357	Vadose Zone Soil	MKNGIATYGSLSHEYYVLKINGRTNSIHRRYQDALKAGLLLKNQFPHVDVKVCEI
Ga0126375_101393281	3300012948	Tropical Forest Soil	MGCFMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH*
Ga0126369_108573972	3300012971	Tropical Forest Soil	MGCLMKNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH*
Ga0126369_118798271	3300012971	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVIQGTVLH*
Ga0126369_132475262	3300012971	Tropical Forest Soil	IDLNSPSSGVPSKQCLGRVVGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMPGTVLH*
Ga0182036_102318132	3300016270	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEQVMQGTVLH
Ga0182036_102813231	3300016270	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPRDDIKVCEITEEVME
Ga0182041_117248831	3300016294	Soil	KNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0182035_105647253	3300016341	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEDVMQGTVLH
Ga0182035_109814171	3300016341	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEIT
Ga0182034_100003937	3300016371	Soil	MGGLMKNRIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH
Ga0182034_107865481	3300016371	Soil	GCVPSKQCLGRVMGCLMKNGIATYGSIPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0182034_117802301	3300016371	Soil	MGCLMKNGIATYGSPCHEYYVLKINGRASSIHRCYEDAVREGLLLRYKFPHDDIKVCEITEEVMQGTVLH
Ga0182037_105673561	3300016404	Soil	MGCLMKNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH
Ga0182039_102588001	3300016422	Soil	KGIETYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0182038_104157261	3300016445	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGT
Ga0182038_109916441	3300016445	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEIT
Ga0182038_111455382	3300016445	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRCQFPHDDIKVCEITEEVM
Ga0187802_100016227	3300017822	Freshwater Sediment	MTNGIATYDSLSHEYYVLKINGRTNSIHRRYGDALRAGLLLRYQFPHDDIKVCEITEEVMEGTVLH
Ga0187802_100097393	3300017822	Freshwater Sediment	MGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAMQDTVLH
Ga0187818_100164217	3300017823	Freshwater Sediment	MGCLMKNGIATYSSLSHEHYVLKINGRTNSIHRRYGDALRAGLLLRYQFPHDDIKVCEITEEVMEGTVLH
Ga0187820_10397112	3300017924	Freshwater Sediment	RVACRVTVSRGAVTMGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAMQDTVLH
Ga0187806_10178025	3300017928	Freshwater Sediment	MSSEQCLGGNLMGCLMKNGITTNGSLSHEYYVLQINGRTDSIHRRYGDALRAGLILKYQFPHVDIKVREI
Ga0187809_103095061	3300017937	Freshwater Sediment	MGCLMKNGIATYSSLSHEHYVLKINGRTNSIHRRYGDALRAGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0187778_100111383	3300017961	Tropical Peatland	MKNGIATYGSLREYYVLQINGQVNSTHRRYQDALIAGLQLKYQFPHDDIKVCVKNPAEEVVQGTILH
Ga0187783_109673692	3300017970	Tropical Peatland	GRLMGCLMKNGIATHGSLSHEYYVLRVNGQANSIHRRYEDAVKAGLLLKYQSPHDDIKVCEITTEEVTQGTVLH
Ga0187783_113745641	3300017970	Tropical Peatland	LSHEYYVLRVNGQANSIHRRYEDAVRAGLLLKYQFPRNGIKVCEITTEEVVQGTVLH
Ga0066667_110939872	3300018433	Grasslands Soil	MGCFMQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVTEEAKQDTALH
Ga0126371_102106921	3300021560	Tropical Forest Soil	RRLMGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0126371_104086583	3300021560	Tropical Forest Soil	MKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEQVM
Ga0126371_109506422	3300021560	Tropical Forest Soil	RVVGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMPGTVLH
Ga0126371_111840501	3300021560	Tropical Forest Soil	MKNGIATYGSLPYDYYVLKINGRANSIHRCYEDALREGLLLRYQFPHDDIKVCEMTEEVMQGTVLHRLGVGEDLH
Ga0126371_114292111	3300021560	Tropical Forest Soil	MGCLMKNGIAAHGSLSHDYYVLKINGRGNSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVLQGTVLH
Ga0126371_121312282	3300021560	Tropical Forest Soil	MKNGIATYGSLAHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPRDDIKVCEITEE
Ga0207858_10225361	3300026909	Tropical Forest Soil	GCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEVMQGTVLH
Ga0207852_10035531	3300026959	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEAVQDTVLH
Ga0207826_100035813	3300027680	Tropical Forest Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0207826_10483182	3300027680	Tropical Forest Soil	VSRGAVTMGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH
Ga0170824_1059413363	3300031231	Forest Soil	MGCLMKNGIATYDSLSHDYYVLKINGRTNSIHRRYQDALRAGLLLKNQFPHDDIKVWEVTEEAKQDTVLH
Ga0170824_1060792411	3300031231	Forest Soil	MGCFMQNGIATYSSLSHEYYVLKINGRANSIHRRYQDALRAGLLLKNQFPHDDIKVWEVTEEAKLDTALH
Ga0170824_1259224021	3300031231	Forest Soil	MQNGSATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVIEEAQQDTALH
Ga0170820_158399452	3300031446	Forest Soil	MQNGIATYSSLSHEYYVLKINGRANSIHRRYEDALREGLLLKNQFPHDDIKVYEVTEEAKQDTAVH
Ga0318541_100094754	3300031545	Soil	MKNGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNQFPNDDVKVYEVTEEVKHDTVLH
Ga0318541_106048411	3300031545	Soil	GTLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH
Ga0318541_107740661	3300031545	Soil	SRRRLMGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0318538_100837193	3300031546	Soil	MKNGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH
Ga0318538_101115523	3300031546	Soil	MGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDVKVYEVTEEAKHDTVLH
Ga0318573_107538662	3300031564	Soil	MGCLMKNGVATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0318515_107158471	3300031572	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTALH
Ga0310915_105964702	3300031573	Soil	GSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQVLL
Ga0318561_104172081	3300031679	Soil	NGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH
Ga0306917_112993982	3300031719	Soil	MGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTFLH
Ga0318502_109190311	3300031747	Soil	RRRLMGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGAVLH
Ga0318546_105380471	3300031771	Soil	GRGTPRINVEAALMGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH
Ga0318576_103576512	3300031796	Soil	MGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLHXSDLESLDRII
Ga0306919_1000033223	3300031879	Soil	MGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRRYRDALREGLLLKNQFPHDDIKVYEVTEEAKHDTVLH
Ga0306921_103330011	3300031912	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQ
Ga0306921_108065772	3300031912	Soil	MGCLMKNGIATYGSLSHEYYVLKINGRASSIHRCYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH
Ga0310916_103991722	3300031942	Soil	MGGLMKNGIATHGSLSHDYYVLRVNGRANSIHRRYEDAVRAGLLLKYQFPHDDIKVCEITTEEVTQGTVSH
Ga0310913_106936982	3300031945	Soil	GSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGTVLH
Ga0310913_112551862	3300031945	Soil	MGCLMKNGIATYGSPCHEYYVLKINGRASSIHRCYEDAVREGLLLGYKFPYDDIKVCEITEEVMQGSVLH
Ga0306926_108591463	3300031954	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGAVLH
Ga0306926_112038942	3300031954	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYEFPHDDIKVCEITEEVMQGTVLH
Ga0318507_104944761	3300032025	Soil	LSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH
Ga0318506_100718043	3300032052	Soil	MGLRPILSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH
Ga0318533_104536171	3300032059	Soil	GHTVSRRRLMGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQGAVLH
Ga0318504_102199071	3300032063	Soil	RGTPRINVEAALMGGLMKNGIATYGSLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH
Ga0306924_100346262	3300032076	Soil	MGCLMKNGIATHGSLSHDYYVLRVNGRANSIHRRYEDAVRAGLLLKYQFPHDDIKVCEITTEEVTQGTVSH
Ga0306924_108481332	3300032076	Soil	MGCLMKNGIATYGSLSHEYYVLKINGRASSIHRCYEDAVREGLLLRYKFPHDDIKVCEITEEVMQGTVLH
Ga0318577_105185442	3300032091	Soil	MTMGCLMNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH
Ga0306920_1019175241	3300032261	Soil	MNNGIATYGSLSHEYYVLKINGRANSIHRRYEDAVREGLLLRYKFPHDDIKVCEITEEAVQDTVLH
Ga0310914_102210962	3300033289	Soil	MGCLMKNGIATYGSLPHDYYVLKINGRANSIHRRYEDALREGLLLRYQFPHDDIKVCEITEEVMQVLH
Ga0318519_100535451	3300033290	Soil	WGYLMKNGIASYGTLSHEYYVLKVNGRTNSIHRLYRDALREGLLLKNHFPNDDVKVYEVTEEVKHDTVLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069862

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences