Metagenome / Metatranscriptome Family F069643

Basic Information
Family ID	F069643
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	75 residues
Representative Sequence	VRSGFGVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMNHFVLPKLRLVFS
Number of Associated Samples	77
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.50 %
% of genes near scaffold ends (potentially truncated)	93.50 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (50.407 % of family members)
Environment Ontology (ENVO)	Unclassified (86.992 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (85.366 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005617\|Ga0068859_101498531	Not Available	744	Open in IMG/M
3300005617\|Ga0068859_101856286	Not Available	665	Open in IMG/M
3300005719\|Ga0068861_102339554	Not Available	536	Open in IMG/M
3300005841\|Ga0068863_101705917	Not Available	639	Open in IMG/M
3300005841\|Ga0068863_101861868	Not Available	611	Open in IMG/M
3300005841\|Ga0068863_102438662	Not Available	532	Open in IMG/M
3300005841\|Ga0068863_102646194	Not Available	510	Open in IMG/M
3300005843\|Ga0068860_101301738	Not Available	747	Open in IMG/M
3300005843\|Ga0068860_101792740	Not Available	635	Open in IMG/M
3300005843\|Ga0068860_102676577	Not Available	517	Open in IMG/M
3300009011\|Ga0105251_10320979	Not Available	704	Open in IMG/M
3300009972\|Ga0105137_110296	Not Available	513	Open in IMG/M
3300009980\|Ga0105135_112538	Not Available	673	Open in IMG/M
3300009980\|Ga0105135_113672	Not Available	656	Open in IMG/M
3300009980\|Ga0105135_123289	Not Available	556	Open in IMG/M
3300009992\|Ga0105120_1021214	Not Available	718	Open in IMG/M
3300009992\|Ga0105120_1038982	Not Available	582	Open in IMG/M
3300009992\|Ga0105120_1043566	Not Available	558	Open in IMG/M
3300009992\|Ga0105120_1044817	Not Available	552	Open in IMG/M
3300009992\|Ga0105120_1052647	Not Available	517	Open in IMG/M
3300009994\|Ga0105126_1038828	Not Available	581	Open in IMG/M
3300009995\|Ga0105139_1063657	Not Available	673	Open in IMG/M
3300009995\|Ga0105139_1063657	Not Available	673	Open in IMG/M
3300010371\|Ga0134125_11757106	Not Available	675	Open in IMG/M
3300010397\|Ga0134124_12954743	Not Available	519	Open in IMG/M
3300010403\|Ga0134123_12966842	Not Available	543	Open in IMG/M
3300010937\|Ga0137776_1210688	Not Available	640	Open in IMG/M
3300014968\|Ga0157379_11483990	Not Available	659	Open in IMG/M
3300015270\|Ga0182183_1093767	Not Available	505	Open in IMG/M
3300015273\|Ga0182102_1021528	Not Available	622	Open in IMG/M
3300015278\|Ga0182099_1039134	Not Available	603	Open in IMG/M
3300015284\|Ga0182101_1086182	Not Available	531	Open in IMG/M
3300015290\|Ga0182105_1062841	Not Available	610	Open in IMG/M
3300015290\|Ga0182105_1076579	Not Available	570	Open in IMG/M
3300015290\|Ga0182105_1081870	Not Available	557	Open in IMG/M
3300015293\|Ga0182103_1104136	Not Available	500	Open in IMG/M
3300015301\|Ga0182184_1096632	Not Available	510	Open in IMG/M
3300015309\|Ga0182098_1056597	Not Available	669	Open in IMG/M
3300015310\|Ga0182162_1102038	Not Available	551	Open in IMG/M
3300015310\|Ga0182162_1108165	Not Available	539	Open in IMG/M
3300015310\|Ga0182162_1108165	Not Available	539	Open in IMG/M
3300015316\|Ga0182121_1030225	Not Available	908	Open in IMG/M
3300015317\|Ga0182136_1031503	Not Available	861	Open in IMG/M
3300015318\|Ga0182181_1068151	Not Available	605	Open in IMG/M
3300015320\|Ga0182165_1038789	Not Available	826	Open in IMG/M
3300015324\|Ga0182134_1059677	Not Available	710	Open in IMG/M
3300015324\|Ga0182134_1060521	Not Available	707	Open in IMG/M
3300015325\|Ga0182148_1092004	Not Available	601	Open in IMG/M
3300015326\|Ga0182166_1117755	Not Available	546	Open in IMG/M
3300015326\|Ga0182166_1124910	Not Available	534	Open in IMG/M
3300015327\|Ga0182114_1135310	Not Available	543	Open in IMG/M
3300015327\|Ga0182114_1153794	Not Available	514	Open in IMG/M
3300015328\|Ga0182153_1067435	Not Available	687	Open in IMG/M
3300015328\|Ga0182153_1144816	Not Available	514	Open in IMG/M
3300015330\|Ga0182152_1036479	Not Available	861	Open in IMG/M
3300015330\|Ga0182152_1135006	Not Available	532	Open in IMG/M
3300015331\|Ga0182131_1098695	Not Available	605	Open in IMG/M
3300015333\|Ga0182147_1113618	Not Available	595	Open in IMG/M
3300015334\|Ga0182132_1120706	Not Available	581	Open in IMG/M
3300015335\|Ga0182116_1136486	Not Available	568	Open in IMG/M
3300015335\|Ga0182116_1173921	Not Available	509	Open in IMG/M
3300015338\|Ga0182137_1133695	Not Available	571	Open in IMG/M
3300015339\|Ga0182149_1061724	Not Available	761	Open in IMG/M
3300015339\|Ga0182149_1084272	Not Available	677	Open in IMG/M
3300015339\|Ga0182149_1151791	Not Available	533	Open in IMG/M
3300015339\|Ga0182149_1162489	Not Available	517	Open in IMG/M
3300015339\|Ga0182149_1162489	Not Available	517	Open in IMG/M
3300015340\|Ga0182133_1176897	Not Available	521	Open in IMG/M
3300015348\|Ga0182115_1264506	Not Available	546	Open in IMG/M
3300015349\|Ga0182185_1140812	Not Available	714	Open in IMG/M
3300015350\|Ga0182163_1167398	Not Available	686	Open in IMG/M
3300015350\|Ga0182163_1189877	Not Available	643	Open in IMG/M
3300015352\|Ga0182169_1246775	Not Available	581	Open in IMG/M
3300015352\|Ga0182169_1276573	Not Available	544	Open in IMG/M
3300015352\|Ga0182169_1278401	Not Available	541	Open in IMG/M
3300015353\|Ga0182179_1218426	Not Available	610	Open in IMG/M
3300015353\|Ga0182179_1236391	Not Available	587	Open in IMG/M
3300015353\|Ga0182179_1250456	Not Available	571	Open in IMG/M
3300015354\|Ga0182167_1181810	Not Available	773	Open in IMG/M
3300017414\|Ga0182195_1106499	Not Available	675	Open in IMG/M
3300017422\|Ga0182201_1134100	Not Available	517	Open in IMG/M
3300017439\|Ga0182200_1046750	Not Available	775	Open in IMG/M
3300017440\|Ga0182214_1129749	Not Available	551	Open in IMG/M
3300017445\|Ga0182198_1135672	Not Available	590	Open in IMG/M
3300017446\|Ga0182217_1148532	Not Available	551	Open in IMG/M
3300017692\|Ga0182210_1162786	Not Available	500	Open in IMG/M
3300017693\|Ga0182216_1064399	Not Available	818	Open in IMG/M
3300017693\|Ga0182216_1153286	Not Available	587	Open in IMG/M
3300020023\|Ga0182178_1022899	Not Available	505	Open in IMG/M
3300025903\|Ga0207680_11039483	Not Available	586	Open in IMG/M
3300028051\|Ga0268344_1024357	Not Available	516	Open in IMG/M
3300028051\|Ga0268344_1025960	Not Available	507	Open in IMG/M
3300028053\|Ga0268346_1032443	Not Available	558	Open in IMG/M
3300028054\|Ga0268306_1013616	Not Available	682	Open in IMG/M
3300028054\|Ga0268306_1035545	Not Available	500	Open in IMG/M
3300028056\|Ga0268330_1042203	Not Available	581	Open in IMG/M
3300028058\|Ga0268332_1009158	Not Available	1014	Open in IMG/M
3300028058\|Ga0268332_1074110	Not Available	515	Open in IMG/M
3300028061\|Ga0268314_1014316	Not Available	796	Open in IMG/M
3300028061\|Ga0268314_1033023	Not Available	602	Open in IMG/M
3300028061\|Ga0268314_1033094	Not Available	601	Open in IMG/M
3300028063\|Ga0268350_1070533	Not Available	500	Open in IMG/M
3300028064\|Ga0268340_1023914	Not Available	788	Open in IMG/M
3300028064\|Ga0268340_1062001	Not Available	570	Open in IMG/M
3300028064\|Ga0268340_1077437	Not Available	524	Open in IMG/M
3300028064\|Ga0268340_1084951	Not Available	506	Open in IMG/M
3300028141\|Ga0268326_1009583	Not Available	567	Open in IMG/M
3300028143\|Ga0268348_1019054	Not Available	556	Open in IMG/M
3300028150\|Ga0268343_1016047	Not Available	542	Open in IMG/M
3300028152\|Ga0268336_1022742	Not Available	555	Open in IMG/M
3300028152\|Ga0268336_1022742	Not Available	555	Open in IMG/M
3300028153\|Ga0268320_1029042	Not Available	509	Open in IMG/M
3300028153\|Ga0268320_1029221	Not Available	508	Open in IMG/M
3300028154\|Ga0268341_1018624	Not Available	596	Open in IMG/M
3300028248\|Ga0268312_1015518	Not Available	670	Open in IMG/M
3300028251\|Ga0268324_1022670	Not Available	527	Open in IMG/M
3300028251\|Ga0268324_1023691	Not Available	520	Open in IMG/M
3300028262\|Ga0268310_1015447	Not Available	751	Open in IMG/M
3300028262\|Ga0268310_1028780	Not Available	616	Open in IMG/M
3300028262\|Ga0268310_1052066	Not Available	503	Open in IMG/M
3300028468\|Ga0268317_1005843	Not Available	636	Open in IMG/M
3300028475\|Ga0268327_1011881	Not Available	647	Open in IMG/M
3300033534\|Ga0314757_1150910	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	96.75%
Environmental	Environmental	3.25%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	96.75%
Terrestrial	Environmental → Terrestrial	2.44%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	76.42%
Unclassified	Host-Associated → Plants → Unclassified	9.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.13%
Soil	Environmental → Terrestrial → Soil	2.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	76.42%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	9.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	76.42%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	9.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.63%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	50.41%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	26.02%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	9.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.44%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009972	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015270	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015273	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015293	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015301	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015320	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015331	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017445	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017446	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017692	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028063	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028141	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028152	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028262	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300033534	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068859_1014985312	3300005617	Switchgrass Rhizosphere	VRSGFGVHKMHHIVLPKLLLVFSQQTCPIHFFRPKTKFLGGFTRFRCREVPVVRSGFGVHKMHHFVLPKLRFVFSQRT
Ga0068859_1018562862	3300005617	Switchgrass Rhizosphere	VRSGFGVHTMHHIVLPMLRLVFSHRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVDTMHHFVLPKLRLVFRNEHAQ
Ga0068861_1023395541	3300005719	Switchgrass Rhizosphere	VRLGFGVHTMHHVVLPKLRLIFSQRTCPIQFFRPKTKFLGGFSRFRCRVIQVVRSGFGVHKMHHFVLSKLRLVFSQ
Ga0068863_1017059172	3300005841	Switchgrass Rhizosphere	VRSGFRVHTMHHFVLPKLCLVFSQRTCPIDFFRPKTKFLGGFARFRCREVPVVRSGFGVHKMHHFVLP
Ga0068863_1018618682	3300005841	Switchgrass Rhizosphere	MRSGFGVHTMHHFMLPKLRLVFSQRICPVHLFRPKTKFLGGFLRFRCQEVLVVRSGFGVHTLHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGF
Ga0068863_1024386621	3300005841	Switchgrass Rhizosphere	VRSGFRVHTMHHFVLLKLCLVFSQRTCPIDFFRPKTNFLGGFVRFRCREVPIVRSGFGVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGG
Ga0068863_1026461941	3300005841	Switchgrass Rhizosphere	VRSGFGVHTLHHFMLPKLRLVFSQRTCPTHFFRPKTKFLGGFARFRCREVQVVRSGFGVHKMHYFVLPKLRLVF
Ga0068860_1013017382	3300005843	Switchgrass Rhizosphere	VRSGFGVHTMHDFMHPKLRLVFSQRTCPIHLLRPKTKFLGGFVRFRYREVPVVRSGFG
Ga0068860_1017927402	3300005843	Switchgrass Rhizosphere	MRSGFGEHTMHHFVLLKLRLVFSQRTCSIHFFRPKTKFLRGFARFRCREVPVVRSGFGVHTMHHFVLQKLRLVFSQRTRPIHFLRPKTKFLGGF
Ga0068860_1026765771	3300005843	Switchgrass Rhizosphere	VPVVRSGFGVHTMHHFMLPKLRLVFSQRTCPIHFFRPKIMFLGGFARFRCREVQVVISGFGVHKMHHFVVPKLRLIFFATNMPNPLLEAQN*
Ga0105251_103209792	3300009011	Switchgrass Rhizosphere	VRSGFRVHTMHHFVLLKLCLVFSQRTCPIDFFRPKTKFLCGFARFRCREVPIVRSGFGAHTMHHFVLPKL
Ga0105137_1102961	3300009972	Switchgrass Associated	VRSGFGVHEMQHFVLPKLRLVFSQRTCPIHFFGPKTKFLGGFARFRCREVPVVRSGFGAHTMHHFMLPKLRL
Ga0105135_1125381	3300009980	Switchgrass Associated	VRSGFGVPKMHHIVLPKLRLAFSQRTCPIHFFRPNTKFLGGFARFRCREVPVVRSGFGVH
Ga0105135_1136721	3300009980	Switchgrass Associated	VRSGFRVHTMHHFVLPKLYLVFSQRTRQIHFFRPKTKILGGFARFRCRVVQVVRSGFRVHEMHHFVLPKLHLVFSQPTCPIHFFRPKTKFLGGFT*
Ga0105135_1232891	3300009980	Switchgrass Associated	VRSGFEVHKMHHFVLPKLRLVFSLRTSPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMHHFMLPKLRLVFSQRTYPIHF
Ga0105120_10212142	3300009992	Switchgrass Associated	VRSGFRVHTMQHFVLRKFCLVFSQRTCPIDFFRPKTKFLGGFARFCCREVPVVRSGFGVDKMHHFVLSKLRLFFATKMPNPLL*
Ga0105120_10389821	3300009992	Switchgrass Associated	MFLGGFARFRCREVPVLRSGLGLHTMHHFVLPKLCLVCSQRTCLIDFFRSKTKLLGGFARFRCREVPVVRSGFGVHKIHHFVLPKL
Ga0105120_10435661	3300009992	Switchgrass Associated	VRSGFGVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMNHFVLPKLRLVFS
Ga0105120_10448171	3300009992	Switchgrass Associated	VRSGFRVHTMDHFVLRKLCLVFSQRTCPIDFFRPKTKFVGGFARFCCREVPVVRSCFGVHKTHHFVLPKLRLFFAMNMPNPLL*
Ga0105120_10526471	3300009992	Switchgrass Associated	VRSGFGMHKMHHFVLPKLRLVFLERTCPIHFFMPKTKFLGGFARFRCREVPVVRSGFGVH
Ga0105126_10388281	3300009994	Switchgrass Associated	VKSGFGVHTMHHFMLPKMRLVFSQRTCPIHLFRPKTKFLCGFARFRCREVQVVRSGFGVHTMHHFMLPKLRLVFRNEHAQ
Ga0105139_10636571	3300009995	Switchgrass Associated	LEVPVVRTGFGVHTMHHFMLPKLRLVFSQRTCPIHFFRPKTMFLGGFVRFRCREVQVVISGFGVHKMHHIVLPKLRLVFLQRTPNPLH*
Ga0105139_10636572	3300009995	Switchgrass Associated	VITGFGVHTMHRFMLPKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVISGFGVHKMHH
Ga0134125_117571062	3300010371	Terrestrial Soil	VRSGFGVHTMHHFVLLKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVRSGFGVHTMHHFMLPKLH
Ga0134124_129547431	3300010397	Terrestrial Soil	VRSGFGVHTMHHFVLPKLRLVCNQRTCPINFFRPKTKFLGGFARFRCRVVQVVRSGFGVHKMHHFVLPKLRLVFATN
Ga0134123_129668421	3300010403	Terrestrial Soil	MRSGFGEHTMHHFVLLKLRLVFSQRTCSIHFFRPKTKFLGGFARFRCREVPFVRSGFRVHTMHHFVLLKLRLVFS*
Ga0137776_12106881	3300010937	Sediment	VVHTMHHFVLPKLRLVFLKRTCSIPFFIPKTMFLDGFARFCCGEVPVARSGIGVHTMHHFVLPKLRLV
Ga0157379_114839902	3300014968	Switchgrass Rhizosphere	VRSGFGVHKMHYFVLPKLRLVFSQRTCPIHFFRPKTRFLGGFARFRCREVPVVRSGMRVHKIHHFVLPKLRLVFSQR
Ga0182183_10937671	3300015270	Switchgrass Phyllosphere	VRSGFGVHTMHHIVLPMLRLVFSHRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVDTMHHFVLPKL
Ga0182102_10215282	3300015273	Switchgrass Phyllosphere	VRSGFGVHTMYHFVLRKLRLVFSQRACPIDFFRLKTKFLGGFARFCCRGVHDVRSGLGV
Ga0182099_10391341	3300015278	Switchgrass Phyllosphere	VRSGFGVHKMHHFVLPKLRLVFSQQTCPIHFFRPKTKFLGGFARFRCPEVQVVRSGFGLHTMHHFVLPKLHIV
Ga0182101_10861822	3300015284	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVCNQRTCPIHFFRPKTKFLGGIARFRCRVVQVVRSGFGVHEMHHLVLPKLRLVF
Ga0182105_10628411	3300015290	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVCNQRTCPIHFFRPKTKFLGGIARFHCRVVQVVRSGFGVHEMHHLVLPKLRLV
Ga0182105_10765791	3300015290	Switchgrass Phyllosphere	VRSCFGVHTMHHFVLPKLRLVFSQRTRPIHFLRPKTKFLGGFARFRCREVPVVRSGFGVHTMHHFVL
Ga0182105_10818701	3300015290	Switchgrass Phyllosphere	VRSGFGVHKMQHFVLRTLRLVFSQRTFPIHFVGPKTKFLGSFARFRGQEVTVV
Ga0182103_11041361	3300015293	Switchgrass Phyllosphere	MRSGFGEHTMHHFVLLKLRLVFSQRTCSIHFFRPKTKFLRGFARFRCREVPVVRSGFEVHKMHHFVLPKLRLVFSLRTSPIQFFRPK
Ga0182184_10966321	3300015301	Switchgrass Phyllosphere	VILLPGGTVVRSGFRVHTMHHFVLLKLCLVFSQRTCPIDFFRPKTNFLGGFVRFRCREVPIVRSGFGVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFA
Ga0182098_10565971	3300015309	Switchgrass Phyllosphere	VRSDFGVHKMHHFVLPKLRLVVSQRTCPIHFFRPKTKFLGGFSRFRCRVVQVVRSGFGVH
Ga0182162_11020381	3300015310	Switchgrass Phyllosphere	VRSGFGVHKMQHFVLPKLRLVFSLRSCPIHFFRPKTKFLGGFARFRCLEVPVVRTGFGVHTMHRFMLPKLRLVFSQRTC
Ga0182162_11081651	3300015310	Switchgrass Phyllosphere	VRSGFGMHTMHHFVLPKLRLVFSQGTCPIHFFRPKTKFLRGFARFRCWEVPVVRSGFGVHTMHHFVLPKL
Ga0182162_11081652	3300015310	Switchgrass Phyllosphere	REVPVVRSGFVVHTMHHFVLPKLRLVFSQQTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMHHFVLPKLRLVFFATNMPNPLL*
Ga0182121_10302251	3300015316	Switchgrass Phyllosphere	VRSGIVVHTMHHFVLPKLRLVFSQRTRPIHFLRPKTKFMGGFARFRCREVPVVRSGFGVHTMHHFVLPKLCLV
Ga0182136_10315032	3300015317	Switchgrass Phyllosphere	VRSGFGVHIMHHFVLPKLRLVFSQRTCPIHFFRHKTKFLGGFARFSCREV
Ga0182181_10681511	3300015318	Switchgrass Phyllosphere	VRSGFRVHTMHHFVLLKLCLVFSQRTCPIDFFRPKTNFLGGFVRFRCREVPIVRSGFGVHKMHHFV
Ga0182165_10387891	3300015320	Switchgrass Phyllosphere	VISGFGVHKMHQFVLPKLRLVFSQRTCPIHFFRPKTKFLAGFARFRCREVQVVRSGLGVHKMHHF
Ga0182134_10596771	3300015324	Switchgrass Phyllosphere	REVQVVRSGFGVHKMHYFVLPKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVISGFGVHKMHHFVVPKLRLVFSQRTCPIHFLWPKTKFLGGFARF*
Ga0182134_10605211	3300015324	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRIVFSQRTCPIHFFRPKTKFLGGFARFRCREVQVVRSGFGVHKMQHYVLPKLRLVFS
Ga0182148_10920041	3300015325	Switchgrass Phyllosphere	VRSGFGLQTMHHFVLPKLRLVFSQRTCPIHFFRLKTKFLGGLSRFRCRVVQVVRSSFGVHKMHHFVLPKLRLV
Ga0182166_11177551	3300015326	Switchgrass Phyllosphere	VRSCFGVHTMHHFVLPKLRLVFSQRTRPIHFLRPKTKFLGGFARFRCREVQVVRSGFGVH
Ga0182166_11249101	3300015326	Switchgrass Phyllosphere	VRSGFGVHKMQHYVLPKLRLVFSLRSCPIHFFRPKTKFLGGFARFSCLEVPVVRTGFGVHTMHRFMLPKLRLVFSQ
Ga0182114_11353101	3300015327	Switchgrass Phyllosphere	VRSGFGVHTVHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFAQFRCREVQVVRSGFGVHKMHHFVLRKF
Ga0182114_11537941	3300015327	Switchgrass Phyllosphere	VRSGLGVHTMHHFVLPKLRLVFSQRTCPIHLFRPKTKFLGGFARFRCREVQVVRSGFGVHTMHQFMLPKLSLVFRNE
Ga0182153_10674351	3300015328	Switchgrass Phyllosphere	VIPLPGGTVVRSGFRVHTMHHFVLLKLCLVFSQRTYPIDFFRPKTNFLGGFVRFRCREVQVVRSGFGVHKMHHFVLPKLCLVFSQRTCRIHFFRPKTKFLGGFVRFRCREVPVV
Ga0182153_11448161	3300015328	Switchgrass Phyllosphere	VRSGFRVHTMHHFVLRKLCLVFSQRTCPFDFFRAKTKFLGGFARFRCREVPVVRSGFGVHKMHHFVLPKLRLYFATNMPNPLL*
Ga0182152_10364792	3300015330	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVFSQRTCPIHLFRPKTKFLGGFARFRCREVHVVRSGFGAHTMRHFMLPKLRVVFSQ
Ga0182152_11350061	3300015330	Switchgrass Phyllosphere	VRSGFGVQKMHHFVHPKLRLVFSQRTCPIHFFRPKTKFLGGFARFHCREVPVVRSGFGVHKMHHFVLPKLCLVFS
Ga0182131_10986951	3300015331	Switchgrass Phyllosphere	VRSGFGVHTIHHFMLPKLHLVFPQRTGPIHLFRPKTKFMGGFTRFRCREVQVVRSGFGVHKMHH
Ga0182147_11136181	3300015333	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKMHIVFSQRTCPIHFFRPKTKFLGGFVRFRCREVHVVRSGFGVHKMHYF
Ga0182132_11207062	3300015334	Switchgrass Phyllosphere	VRSGFVVHTMHHFVLPKVRLIFKQRTCPIDFFRPKTKFLGGFAQFCCREVQVVRSGFRVHKMHHFVLPKLLLVFSQQTCPIHFFRPKTKFLGGFA*
Ga0182116_11364861	3300015335	Switchgrass Phyllosphere	VRSGFGVHTMNHFMLPKLRLVFSQRTCPIHLFRPKTKFLGGFARFRRREVQVVRSGFGVHTMHHFMLPKLRLVFRNEHAQSTCL
Ga0182116_11739211	3300015335	Switchgrass Phyllosphere	VRSGFGVHTMHHFMLPKLRLVFSQRTCPIHFFRTKTKFLGGFARFRCREVPVVRSGFGVHTMHHFVLPKLRLVF
Ga0182137_11336951	3300015338	Switchgrass Phyllosphere	VRLGFGVHKMHHFVLPKLRLVFSQRTCPIHLFRPKPKFLGGFVRFRCREVQVVRSGFGVHTMHHFMLPKMRLIFSQRTCPIHFFRPKTKFLAG
Ga0182149_10617241	3300015339	Switchgrass Phyllosphere	MRSGFGEHTMHHFVLLKLRLVFSQRTCSIHFFRPKNKFLRGFARFRCREVPVVRSGFGVHTMHHFVLPKLHLD
Ga0182149_10842721	3300015339	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVFSQRTCPIHFFRSKTKFLRGFARFRCWEVLVVRSGFGVHTMHHFVLPKLRI
Ga0182149_11517911	3300015339	Switchgrass Phyllosphere	VRSGFGVHKMHHFVLPKLRLVFSEQTCPIHFFRPKTKLLGGFTRFRYLEVPVVRTGFGVHTM
Ga0182149_11624891	3300015339	Switchgrass Phyllosphere	VRSGFGVHKMQHFVLRTLRLVFSQRTFPIHFVRPKSKFLGSFARFRCREVQVVISGFGVHKMQHFVLP
Ga0182149_11624892	3300015339	Switchgrass Phyllosphere	VERSGVGVHKMHHFVLPKLRLVFRNERAQCTSLGQTKFLGGFVRFRCREVPVERSGVGVHKMHHFVLPKLRLVFSQ*
Ga0182133_11768971	3300015340	Switchgrass Phyllosphere	VRSGFGVHTMHHIVLPMLRLVFSHRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVDTMHHFVL
Ga0182115_12645061	3300015348	Switchgrass Phyllosphere	VRSGFGVHTMHHFVFPKLRLVFSQRTCPIDFFRPKTKFLGGIARFRCREVPVERSGVGVHKMHHFVLPKLRFVFRNEHAQSTSL
Ga0182185_11408121	3300015349	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVCNQRTCPIHFFRPKTKFLGGIARFRCRVVQVVRSGFGVHEMHHLVLPKLRLVFATNLPNPLF*
Ga0182163_11673982	3300015350	Switchgrass Phyllosphere	VRSGFGMHTMHHFVLPKLRLVFSQGTCPIHFFRPKTKFLRGFARFRCWEVPVVRSGFGVHTMH
Ga0182163_11898772	3300015350	Switchgrass Phyllosphere	VRSGFGVHTMHRFVLPKLRLVFSQRTCPIHFLKPKTKFLGGFARFRSREVQVVRSGFRVHKMHHFVLPKLRLVFRNE
Ga0182169_12467751	3300015352	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLPKLRLVFSQRTYPIHFFRPKTKFLGGFERFRCREVPVVRSGFGVHTMHHFVLPKLRLVFSQR
Ga0182169_12765731	3300015352	Switchgrass Phyllosphere	VRSGFGVHEMHHFVLPKLRLVFSQRTCSIHFFRPKTKFLVGFARFRCREVPVLRSGFGVHTMHHFMLPKLHLVC
Ga0182169_12784011	3300015352	Switchgrass Phyllosphere	VRSGFGVHKMHHFVLPNLRLVFWQRTCPIHFFRPKTKFLGGFVRFRCREVPVVRSGFGVHTMHHFVLPKLRL
Ga0182179_12184261	3300015353	Switchgrass Phyllosphere	VRTGFGVHTIHRFMLPKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVISGFGVHKMHHFVLPKLRLVF
Ga0182179_12363912	3300015353	Switchgrass Phyllosphere	VVRSGFGVHTMHHFVLLKLRLVFSQRTRPIHFLRPKTKFLGGFARFRCREVPVVRLDFGVHTMHHFVLPKLRLVFSQRSFPMHFVRPKTKFLGGFA*
Ga0182179_12504561	3300015353	Switchgrass Phyllosphere	VRSGFGVHTMPHFMLPKLGLVFSQRTCPIHYFRPKTKILGGFARFCCREVQVVRSGFGVHKMHHFVLPKLLLIFSQ
Ga0182167_11818101	3300015354	Switchgrass Phyllosphere	VILLPGGTVVRSGFRVHTMHHFVLLKLCLVFSQRTCPINFFRPKTNFLGGFVRFRCREVPIVRSG
Ga0182195_11064992	3300017414	Switchgrass Phyllosphere	VRSGFGVHTMYHFMLPKLRLVFSQRTYPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVH
Ga0182201_11341001	3300017422	Switchgrass Phyllosphere	VRSGFGLHTMHHFVLQKLRLVFSQQTYPIHFFRSKTKFLGGFARFRCWEVPVVRSGFGVHKMHHFVLPKLRL
Ga0182200_10467501	3300017439	Switchgrass Phyllosphere	VRSGFRLHTMHHFLVPKLCLVFSQRTCPIDFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMHHFVLPKLRLV
Ga0182214_11297491	3300017440	Switchgrass Phyllosphere	VRTGFGVHTMHHFMLPKLRLVFSQQTCPIHFFRPKTKFLGGFARFRCLEVSVVRTGFGVHTMHHFMLPKLRLVFSQRTC
Ga0182198_11356721	3300017445	Switchgrass Phyllosphere	VRSGFGVHTMHHFVLLKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVRSG
Ga0182217_11485322	3300017446	Switchgrass Phyllosphere	VRSGFGVHTTHHFVLPKLRLVFSQRTCPIHLFRPKTKFRVGFARFCCREVQVVRSGFGVHKMHHFVLPKLRLVLS
Ga0182210_11627861	3300017692	Switchgrass Phyllosphere	VRSGFGVHTMHRFVLPKLRLVFSQRTSPIQFFRPKTKFLRGFARFHCWEVPVVRSGFGVHTMHHFVLPKLRIVFS
Ga0182216_10643991	3300017693	Switchgrass Phyllosphere	VRSGFGVHTIHHFMLPKLRLVFSQRTCPTHFFRPKTKFLGGFARFRCREVPVVRSGFLVRTMHHFMLLKLRLVFSQPTWPIHFFRPKTKFLGGFARFRCREVPVVR
Ga0182216_11532861	3300017693	Switchgrass Phyllosphere	VISGFGLHKMHHFVLPKLLLVFSQQTCPIHFFRPKTKFLGGFARFRCREVQVVRSGFGVHKMHHF
Ga0182178_10228991	3300020023	Switchgrass Phyllosphere	VRFRYREVQVVRSCFGVHKMPHFVLPKLRLVFWQRTCQIHFFRPKIEFLGGFARFRCREVPVVRSGFGVHTMH
Ga0207680_110394831	3300025903	Switchgrass Rhizosphere	VRLGFGVHKMQHYVLPKLRLVFSLRSCPIHFFRPKTKFLGGFARFSCLEVPVVRTGFGV
Ga0268344_10243571	3300028051	Phyllosphere	VRSGFGVHTMHHFVLPKLCLVFSKQTCPIHFFRPKTMFLGGFVRFRSREVQVVRSDFGVHKMHHFVLPKLRFV
Ga0268344_10259601	3300028051	Phyllosphere	VRSGFGVHKMQHFVLPKLRLVFLLRSCPIHFFRAKTKFLGGFARFRCLEIPVVRTGFGVHTMHRFMLPKLRLVFSQRTCPIHFFRPKTMF
Ga0268346_10324432	3300028053	Phyllosphere	VRSGFGVHTMHHFVLPKLHIVFSQRTCPIHFFRLKTKFLGGFARFRCREVHVLRSGFGVHKMHHFVL
Ga0268306_10136161	3300028054	Phyllosphere	VRSGFGVHTMHHFVLPKLRLVCNQRTCPIHFFRPKTKFLGGIARFRCRVVQVVRSGFGVHKMHHFVLPKLRLVFSQR
Ga0268306_10355452	3300028054	Phyllosphere	VRSGFGVHTMHRFVLPKLRLVFSQQTCPIQFFRPKTKFLRGFARFHCWEVPVVRSGFGVHTMHHFVLPKLRLVFSQRTCP
Ga0268330_10422031	3300028056	Phyllosphere	VRSGIRVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFVRFRCREVPVVRSGFGVHTMHHFVLPKLRLVFRNELA
Ga0268332_10091581	3300028058	Phyllosphere	VRSGFGVHTMHHFVLLKLRLVFSQRTCPIHFFRPKTMFLGGFARFRCREVQVVRSGFGVHTMHHFMLPKLHLVFPQR
Ga0268332_10741102	3300028058	Phyllosphere	VRPGFGVHKMHHHFVHPKLRLVFSQRTCRIHFFRPKTKFLGGFAQFRCREVPVVRSGFGVHKMHHFVLPKLRLVFSQQTWPIHFFRPKTKFLGGFA
Ga0268314_10143161	3300028061	Phyllosphere	VRSGFGVHTMHHFVLPKLRIVFSQRTCPIHFFRPKTKFLGGFARFRSREVHVVRSGFGVH
Ga0268314_10330231	3300028061	Phyllosphere	VRSGFGVHKMQHFMLPKLRLVFLLRSCPIHFFRPKTKFLGGFARFSILEVPVVRSGFGVHTMHHFMLPKLRLV
Ga0268314_10330942	3300028061	Phyllosphere	VISGFGVHKMHYFVLPKLRLVFSQRTWPIHFFRPKTRFLGGFARFRCREVPVVRSGM
Ga0268350_10705331	3300028063	Phyllosphere	VRSGFGVHKMHHFVLPKLRLVLSQRTCPIHFFRPKTKFLGGFARFRCREVQVVRSGFGVHKMH
Ga0268340_10239142	3300028064	Phyllosphere	MIPLPGGTRCEIAFWVHTMHHFVLPKLRLVFLQRTCPIHFFRPKTKFLGGFDRFCCREVQVVRSDFGVHKMHHFVLPKLRLVFSQRT
Ga0268340_10620011	3300028064	Phyllosphere	VRSGFGVHTMHHFMLPKLRLVFPQRTCPIHLFRPKTKFMGGFARFRCREVQVVRSGFGVHKMHHFVLPKLRLVFRNEHAQ
Ga0268340_10774371	3300028064	Phyllosphere	VRSGFGVHKMHYFVLPKLRLVFSQRTCPMHFHRPKTKFLGGFARFRCREVAVVRSGFGL
Ga0268340_10849511	3300028064	Phyllosphere	VRSGFGVHKMHHFVLPKLRLVFLQQTCPILFFSPKTKFLGGFVRFRCLEVSVMRTG
Ga0268326_10095832	3300028141	Phyllosphere	VRSGFGVHTMHHFVLPKLRLVCNQRTCPIHFFGPKTKFLGGIARFRCRVVQVVRSGFGVHEMHHLVLPKLRLVF
Ga0268348_10190541	3300028143	Phyllosphere	VRSGFGVHKMHHFVHPKLRLVFSQRTCRIHFFRPKTKFLGGFARFRCREVPVVRLGFVVHKVHHFVLSKF
Ga0268343_10160471	3300028150	Phyllosphere	VRSGFGVHKMHHFVLPKLLLVFSQRTCPIHFFRPQTKFLGGFSRFRCREVPVVTSGFGVHTMQHFVLPKLRLIF
Ga0268336_10227421	3300028152	Phyllosphere	VRSGFGVHKMHHFVLPKLLLVFSQRTCPIHFFRPQTKFLGGFSRFRCREVPVVTSGFGVHTMQHFVLPKLRLIFSQRTHP
Ga0268336_10227422	3300028152	Phyllosphere	VTSGFGVHTMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFARFRGREVPVVTSGFGVHTMHHFVLPKLLLVFPQ
Ga0268320_10290421	3300028153	Phyllosphere	VILLPGGTVVRSGFRVHTMHHFVLLKLCLVFSQRTCPIDFFRPKTNFLGGFVRFRCREVPIVRSGFGVHKMHHFVLPKLHLVFSQRTCPIHIFRPKT
Ga0268320_10292211	3300028153	Phyllosphere	VRTGFGVHTMHHFMLPKLRLVFSQQTCPIHFFRPKTKFLGGFARFRCLEVSVVRSGFGVQKMH
Ga0268341_10186241	3300028154	Phyllosphere	VRSGFGVHRMLHILLPMLRLVFSHRTCPIDFFRPKTKFLGGFARFRCREVPVVRSGFGVDTMHHFVLPKLRLVFRNEHAQSTS
Ga0268312_10155182	3300028248	Phyllosphere	FVLPKLRLVFSQRTCPIHFFRPKTKFLGGFARFRGREVPVVTSGFGVHTMHHFVLPKLLLVFPQ
Ga0268324_10226701	3300028251	Phyllosphere	VRSGFGVHTMHHFVLPKLCLVFSKQTCPIHFFRPKTMFLGGFVRFRSREVQVVRSDFGVHKMHHFVLPKLRFVFSQRTCPIHFFRPKTMFQGGFARFRCREVPIVR
Ga0268324_10236911	3300028251	Phyllosphere	VRSGFGVHKMHHFVLPKLRLVFSQRTCPIHFFRPKTKFLGGFARFRCREVPVVRSGFGVHTMHHFVL
Ga0268310_10154471	3300028262	Phyllosphere	VRSGFGVHTMHHFVLPKMHIVFSQRTCPIHFFRPKTKFLGGFVRFRCREVHVVRSGFGVHKMHYFVLPKLRLVFFATNLPN
Ga0268310_10287801	3300028262	Phyllosphere	VRSGFGVHTMHHFVLPMLRLDFSQRTCPIHFFRPKTMFLGGFARFRCREVPVVRSGFWVHTMHHFVLPNLRLVFFTT
Ga0268310_10520661	3300028262	Phyllosphere	VRSGFGAHTLHHFVLPKLRLVFSQQTCPIHFFRPKTKFQGGFARFRYRKVPVVRSRFRVHTMHHFVLPKL
Ga0268317_10058432	3300028468	Phyllosphere	VRSGFGVHTMHRFVLPKLRLVFSQRTCPIHFLKPKTKFLGGFARFRSREVQVVRSGFRVHKMHHFVLPKLRLVFRN
Ga0268327_10118811	3300028475	Phyllosphere	VRSGFGAHTMHHFVLPKLRLVFSQRTFPIHFLRPKTKFLGGFTRFRYREVPVVRSGFGVHTMHRFML
Ga0314757_11509101	3300033534	Switchgrass Phyllosphere	VRTGFGVHTMHRFMLPKLRLVFSQRTFPIHFFRPKTMFLGGFARFRCREVQVVISGFGVHKMHHFVLPKLRLVFSQPTCPIHFFR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069643

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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