NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069607

Metagenome / Metatranscriptome Family F069607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069607
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 127 residues
Representative Sequence QFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Number of Associated Samples 71
Number of Associated Scaffolds 122

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.28 %
% of genes near scaffold ends (potentially truncated) 69.11 %
% of genes from short scaffolds (< 2000 bps) 82.93 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.187 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.138 % of family members)
Environment Ontology (ENVO) Unclassified
(41.463 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.902 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.19%    β-sheet: 12.90%    Coil/Unstructured: 52.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 122 Family Scaffolds
PF02355SecD_SecF 17.21
PF02272DHHA1 2.46
PF00873ACR_tran 1.64
PF07973tRNA_SAD 1.64
PF05198IF3_N 0.82
PF01368DHH 0.82
PF00005ABC_tran 0.82
PF13560HTH_31 0.82
PF07991IlvN 0.82
PF00069Pkinase 0.82
PF07549Sec_GG 0.82
PF02518HATPase_c 0.82
PF02470MlaD 0.82
PF02699YajC 0.82

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 122 Family Scaffolds
COG0341Preprotein translocase subunit SecFIntracellular trafficking, secretion, and vesicular transport [U] 18.03
COG0342Preprotein translocase subunit SecDIntracellular trafficking, secretion, and vesicular transport [U] 18.03
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.28
COG0059Ketol-acid reductoisomeraseAmino acid transport and metabolism [E] 1.64
COG0290Translation initiation factor IF-3Translation, ribosomal structure and biogenesis [J] 0.82
COG0499S-adenosylhomocysteine hydrolaseCoenzyme transport and metabolism [H] 0.82
COG1862Protein translocase subunit YajCIntracellular trafficking, secretion, and vesicular transport [U] 0.82

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104608659All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium509Open in IMG/M
3300000956|JGI10216J12902_106975708All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium800Open in IMG/M
3300003308|Ga0006777J48905_1004806All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium701Open in IMG/M
3300003316|rootH1_10182710All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1139Open in IMG/M
3300003320|rootH2_10060820All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum1355Open in IMG/M
3300003322|rootL2_10090207All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum2128Open in IMG/M
3300003323|rootH1_10144894All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum5255Open in IMG/M
3300003323|rootH1_10160244All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1452Open in IMG/M
3300003323|rootH1_10175866All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum2143Open in IMG/M
3300004463|Ga0063356_100024084All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus5751Open in IMG/M
3300005337|Ga0070682_100702120All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium811Open in IMG/M
3300005337|Ga0070682_100780398All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium774Open in IMG/M
3300005367|Ga0070667_102104616All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium532Open in IMG/M
3300005539|Ga0068853_101310045All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium700Open in IMG/M
3300005548|Ga0070665_102386798All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium531Open in IMG/M
3300005563|Ga0068855_100000258All Organisms → cellular organisms → Bacteria → Proteobacteria66506Open in IMG/M
3300005618|Ga0068864_100128407All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum2274Open in IMG/M
3300005719|Ga0068861_100174372All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1785Open in IMG/M
3300005841|Ga0068863_101447980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium695Open in IMG/M
3300009448|Ga0114940_10003011All Organisms → cellular organisms → Bacteria → Proteobacteria6311Open in IMG/M
3300010042|Ga0126314_11108815All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium589Open in IMG/M
3300010166|Ga0126306_10166145All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae1648Open in IMG/M
3300010400|Ga0134122_12717337All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium547Open in IMG/M
3300010403|Ga0134123_11708123All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium680Open in IMG/M
3300011332|Ga0126317_10700142All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium556Open in IMG/M
3300011424|Ga0137439_1033977All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium916Open in IMG/M
3300012212|Ga0150985_103132058All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium669Open in IMG/M
3300012212|Ga0150985_104141922All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium559Open in IMG/M
3300012212|Ga0150985_105403164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium533Open in IMG/M
3300012212|Ga0150985_105707072All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium574Open in IMG/M
3300012212|Ga0150985_106173237All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium672Open in IMG/M
3300012212|Ga0150985_107639556All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium676Open in IMG/M
3300012212|Ga0150985_108828676All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium589Open in IMG/M
3300012212|Ga0150985_110150578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium652Open in IMG/M
3300012212|Ga0150985_110240417All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium704Open in IMG/M
3300012212|Ga0150985_112234729All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium583Open in IMG/M
3300012212|Ga0150985_113931164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium703Open in IMG/M
3300012212|Ga0150985_116210884All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium900Open in IMG/M
3300012212|Ga0150985_117446590All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium626Open in IMG/M
3300012212|Ga0150985_118051515All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium539Open in IMG/M
3300012212|Ga0150985_120256710All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium733Open in IMG/M
3300012406|Ga0134053_1435312All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium771Open in IMG/M
3300012469|Ga0150984_100556715All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium772Open in IMG/M
3300012469|Ga0150984_101702935All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium608Open in IMG/M
3300012469|Ga0150984_103542143All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium704Open in IMG/M
3300012469|Ga0150984_105161190All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium530Open in IMG/M
3300012469|Ga0150984_106514605All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium708Open in IMG/M
3300012469|Ga0150984_107219691All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium504Open in IMG/M
3300012469|Ga0150984_107603285All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium883Open in IMG/M
3300012469|Ga0150984_108061175All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium659Open in IMG/M
3300012469|Ga0150984_109586164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium588Open in IMG/M
3300012469|Ga0150984_111458749All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium588Open in IMG/M
3300012469|Ga0150984_111806418All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1046Open in IMG/M
3300012469|Ga0150984_112913014All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium719Open in IMG/M
3300012469|Ga0150984_114363217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium703Open in IMG/M
3300012469|Ga0150984_114494569All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1211Open in IMG/M
3300012469|Ga0150984_117558244All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium764Open in IMG/M
3300012469|Ga0150984_118540019All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium711Open in IMG/M
3300012469|Ga0150984_119632603All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium773Open in IMG/M
3300012469|Ga0150984_119891426All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium686Open in IMG/M
3300012904|Ga0157282_10369923All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium528Open in IMG/M
3300012916|Ga0157310_10088272All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium976Open in IMG/M
3300012930|Ga0137407_10222393All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1702Open in IMG/M
3300012943|Ga0164241_10000263All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae115742Open in IMG/M
3300012943|Ga0164241_10000842All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales45224Open in IMG/M
3300012943|Ga0164241_10016434All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae5955Open in IMG/M
3300012985|Ga0164308_10365879All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1168Open in IMG/M
3300012987|Ga0164307_10036095All Organisms → cellular organisms → Bacteria2725Open in IMG/M
3300012988|Ga0164306_10019693All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3694Open in IMG/M
3300015360|Ga0163144_10033767All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum9668Open in IMG/M
3300015360|Ga0163144_11053524All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium769Open in IMG/M
3300018432|Ga0190275_10201666All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1882Open in IMG/M
3300019263|Ga0184647_1321997All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium519Open in IMG/M
3300019279|Ga0184642_1243668All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium763Open in IMG/M
3300020000|Ga0193692_1005847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium3130Open in IMG/M
3300020034|Ga0193753_10177051All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium995Open in IMG/M
3300020078|Ga0206352_10859521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium527Open in IMG/M
3300020192|Ga0163147_10054043All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium3009Open in IMG/M
3300020213|Ga0163152_10284754All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium840Open in IMG/M
3300021315|Ga0179958_1063750All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium703Open in IMG/M
(restricted) 3300021517|Ga0224723_1025653All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2341Open in IMG/M
3300025949|Ga0207667_10000320All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales66680Open in IMG/M
3300025986|Ga0207658_11080035All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium733Open in IMG/M
3300026118|Ga0207675_100266421All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1662Open in IMG/M
3300028379|Ga0268266_11681823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium610Open in IMG/M
3300028778|Ga0307288_10355960All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium590Open in IMG/M
3300028794|Ga0307515_10167970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium2202Open in IMG/M
3300029984|Ga0311332_10768955All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium767Open in IMG/M
3300029990|Ga0311336_11082899All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium698Open in IMG/M
3300030730|Ga0307482_1290663All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium523Open in IMG/M
3300030905|Ga0308200_1102544All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium611Open in IMG/M
3300030905|Ga0308200_1149041All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium539Open in IMG/M
3300030988|Ga0308183_1068569All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium751Open in IMG/M
3300031058|Ga0308189_10092093All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium944Open in IMG/M
3300031058|Ga0308189_10092093All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium944Open in IMG/M
3300031058|Ga0308189_10202838All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium720Open in IMG/M
3300031058|Ga0308189_10383293All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium576Open in IMG/M
3300031082|Ga0308192_1035302All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium708Open in IMG/M
3300031091|Ga0308201_10348273All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium542Open in IMG/M
3300031091|Ga0308201_10420383All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium507Open in IMG/M
3300031092|Ga0308204_10090460All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium826Open in IMG/M
3300031092|Ga0308204_10284608All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium548Open in IMG/M
3300031123|Ga0308195_1081433All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium517Open in IMG/M
3300031232|Ga0302323_100785927All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1045Open in IMG/M
3300031456|Ga0307513_11096381All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium508Open in IMG/M
3300031521|Ga0311364_11269346All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium731Open in IMG/M
3300031616|Ga0307508_10000993All Organisms → cellular organisms → Bacteria → Proteobacteria32982Open in IMG/M
3300031730|Ga0307516_10007140All Organisms → cellular organisms → Bacteria → Proteobacteria12897Open in IMG/M
3300031911|Ga0307412_11914976All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium547Open in IMG/M
3300033475|Ga0310811_10450478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium1377Open in IMG/M
3300034659|Ga0314780_043045All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium876Open in IMG/M
3300034659|Ga0314780_084539All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium699Open in IMG/M
3300034659|Ga0314780_141491All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium586Open in IMG/M
3300034659|Ga0314780_182821All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium537Open in IMG/M
3300034659|Ga0314780_187481All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium533Open in IMG/M
3300034660|Ga0314781_038670All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium819Open in IMG/M
3300034660|Ga0314781_119587All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium547Open in IMG/M
3300034660|Ga0314781_142282All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium514Open in IMG/M
3300034660|Ga0314781_152310All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium502Open in IMG/M
3300034661|Ga0314782_057336All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium793Open in IMG/M
3300034661|Ga0314782_162746All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium555Open in IMG/M
3300034662|Ga0314783_105502All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium606Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.14%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere16.26%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere12.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.76%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil4.88%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat3.25%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.25%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.25%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.25%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.44%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.63%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.63%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.63%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.81%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.81%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.81%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003308Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300003316Sugarcane root Sample L1Host-AssociatedOpen in IMG/M
3300003320Sugarcane root Sample H2Host-AssociatedOpen in IMG/M
3300003322Sugarcane root Sample L2Host-AssociatedOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300009448Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek SourceEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011424Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020000Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020192Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1EnvironmentalOpen in IMG/M
3300020213Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021517 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaGEnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031123Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034660Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10460865913300000364SoilTPHFPSPAVGKLPLALSPELWEALTPTQRELFERADHLLGEFTFNPELAQSLDDLVEKSGDDADDVLSALRLLDTMALVNIESSEDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPRTLN*
JGI10216J12902_10697570813300000956SoilRPGAAVDSLGPVLTFSRMSAPQFPASTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEQEQSLDDLVEKSGNDAHDVLSALRLLDTMALVNVETSDEGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPNTLN*
Ga0006777J48905_100480613300003308Avena Fatua RhizosphereELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
rootH1_1018271023300003316Sugarcane Root And Bulk SoilMAAPTTSVPTPAKLPLALSQELWEGLTPSQRELFQRADHLLDAFTFNPQLAQSLDDLVEKSGDDADEVLSALRLLDTMALVGVEASEDGPVFSLRATPEEHVRIQGPDNKPRWVFIARPIEPKEIDPKALN*
rootH2_1006082023300003320Sugarcane Root And Bulk SoilMAATNSLPVSTTEKLPLALSQELWEALTPTQRELFQRADHLLDAFTFDPASSQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSEEGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEPKDVDPRTLN*
rootL2_1009020723300003322Sugarcane Root And Bulk SoilMAAPTTSVPTPAKLPLALSQELWEGLTPSQRELFQRADHLLDAFTFNPQLAQSLDDLVEKSGDDADEVLSALRLLDTMALVNVEASEDGPVFSLRATPEEHVRIQGPDNKPRWVFIARPIEPKEIDPKALN*
rootH1_1014489443300003323Sugarcane Root And Bulk SoilMAAPELSVPQKLPLALSPELWEALTPSQRELFQRADHLLDAFAFAPEVSQTLDDLVEKSGDDADDVLSALRLLDNMALVNVESSDEGPVFSLRATPEEHVRIQGPDNKPRWVFIARPVEPKDVDPRTLN*
rootH1_1016024413300003323Sugarcane Root And Bulk SoilMAAPELSNPQKLPLALSTELWEALTPSQRELFQRADHLLDAFAFAPEVSQTLEDLVEKSGDDADDVLSALRLLDNMALVNVESSDDGPVFSLRATPEEHVRIQGPDNKPRWVFIA
rootH1_1017586623300003323Sugarcane Root And Bulk SoilMPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPERAQSLDDLVEKSGDEADDVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEPKDVDPSTLN*
Ga0063356_10002408443300004463Arabidopsis Thaliana RhizosphereMAASHPPVSIPEKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPERTQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0070682_10070212023300005337Corn RhizosphereLALGLPPRRAVDRAGSVLTFSAMAAQHPPVATPEKLPLALSPELWEALTPTQRELFQRADHLLDTFAFAPEVEQSLDDLVEKSGSDADEVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0070682_10078039813300005337Corn RhizosphereMAASHPPVSIHDKLPLALSQELWEALTPTQRELFQRADHLLDTFTFQPELAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEA
Ga0070667_10210461613300005367Switchgrass RhizosphereTEKLPLALSQELWEALTPTQRELFQRADHLLDAFTFDPASTQSLDDLVEQSGDDADEVLSALRLLDTMALVNVESSEEGPIFSLRATPEEHVRITGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0068853_10131004513300005539Corn RhizosphereAASHPPVSIHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPEAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEAKDVDPKSLN*
Ga0070665_10238679813300005548Switchgrass RhizospherePEKLPLALSQELWEALTPTQQELFQRADHLLDTFTFAPEQEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVETSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPRDVDPNTLN*
Ga0068855_100000258473300005563Corn RhizosphereMAASHPPVSIHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPEAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEAKDVDPKSLN*
Ga0068864_10012840733300005618Switchgrass RhizosphereMHAPQSPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVEPSEDGPIFSLRATPEEHLRINGPDNKPRWVFIARPVEPKDVDPSSLN*
Ga0068861_10017437213300005719Switchgrass RhizosphereMLTYFGMAAINLPVSASEKLPLALSQELWEALTPTQRALFQRADHLLDAFTFAPQAAHSLDDLVEKSGDDADEVLSALRLLDTMALVSVEPSEDGPIFSLRATPEEHVRITGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0068863_10144798013300005841Switchgrass RhizosphereDSAGPVLTFSSMHAPQSPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVEPSEDGPIFSLRATPEEHLRINGPDNKPRWVFIARPVEPKDVDPSSLN*
Ga0114940_1000301113300009448GroundwaterMAAPQFPVLTPEKLPLALSPELWDALTPSQRVLFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSEDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0126314_1110881513300010042Serpentine SoilVSTTEKLPLALSQELWEALTPTQRELFQRADHLLDAFTFDPASTQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSEEGPIFSLRATPEEHVRITGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0126306_1016614523300010166Serpentine SoilMSAPQFPASTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEQEQSLDDLVEKSGNDAHDVLSALRLLDTMALVNVETSDDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPNSLN*
Ga0134122_1271733713300010400Terrestrial SoilALTPTQRELFQRADHLLDTFAFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVERRDVDPSTLN*
Ga0134123_1170812313300010403Terrestrial SoilDSAGPVLTFSSMHAPQSPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGNDADEVLSALRLLDNMALVNVEPSEDGPIFSLRATPEEHLRINGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0126317_1070014213300011332SoilPLALSQELWEALTPTQQELFQRADHLLDTFTFDPELAQSLDDLVEKSGNDADDVLSALRLLDTMALVNVEPSDDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPNTLN*
Ga0137439_103397713300011424SoilMAAFHPPVSTPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPERAQSLDDLVERSGDEADEVLSALRLLDTMALVNIEPSEDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0150985_10313205823300012212Avena Fatua RhizospherePHFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150985_10414192213300012212Avena Fatua RhizosphereFPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDEGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0150985_10540316413300012212Avena Fatua RhizosphereHFPVASHDKLPLALSPELWEALTPTQRELFERADHLLGEFTFNPELPQSLDDLVEKSGDDADDVLSALRLLDTMSLVNVEASEDGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEAKEVDPSTLN*
Ga0150985_10570707213300012212Avena Fatua RhizospherePVSIHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPEAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDEGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150985_10617323713300012212Avena Fatua RhizosphereHAPVSIHDKIPLALSQELWEALTPTQRELFQRADHLLDTFTFQPELAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150985_10763955613300012212Avena Fatua RhizosphereSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVESSEDGPVFSLRATPEEHLRINGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150985_10882867623300012212Avena Fatua RhizosphereTPEKLPLALSPELWEALTPTQKELFKRADHLLDAFTFQPELEQSLDDLVEKSGDDADEVLSALRLLDTMALVNIESSDDGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEARDVDPSTLN*
Ga0150985_11015057823300012212Avena Fatua RhizosphereMLGPGVDTAGSVLKFPGIAALQVPVSTPEKLPLALSQELWEALTPTQKELFKRADHLLDAFAFQPELEQSLDDLVEKSGDDADEVLSALRLLDTMALVNIESSDDGPVFSLRATPEEHVRIQGPDNKPRWVFIARPVEPRDVDPNTLN*
Ga0150985_11024041713300012212Avena Fatua RhizosphereAHPPVSTLEKLPLALSQELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSEDGPIFSLRATPEEHMRIQGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150985_11223472913300012212Avena Fatua RhizosphereSTVEKLPLALSQELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGDDADEVLSALRLLDNMALVNVESSDEGPVFSLRATPEEHVRINGPDNKPRWVFIARPVEPKDVDPSSLN*
Ga0150985_11393116413300012212Avena Fatua RhizosphereHFPVASHDKLPLALSPELWEALTPTQRELFERADHLLGEFTFNPELPQSLDDLVEKSGDDADDVLSALRLLDTMSLVNVEASEDGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEAKDVDPSALN*
Ga0150985_11621088413300012212Avena Fatua RhizosphereQAPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVEPSEDGPIFSLRATPEEHLRINGPDNKPRWVFIARPVEPKDVDPSSLN*
Ga0150985_11744659013300012212Avena Fatua RhizospherePHFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDNGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150985_11805151513300012212Avena Fatua RhizosphereLSGTGIDKLPLALSPELWEALTPTQRELFERADHLLDAFTGDPEEGQSLDELIEKSGDNADEVLSALRLLDNMSLVNVEPSDEGPVFWLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150985_12025671023300012212Avena Fatua RhizospherePLALSPELWEALTPTQKELFQRADHLLDAFTFQPELEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPLFSLRATPEEHVQIKGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0134053_143531223300012406Grasslands SoilLSQELWEALTPTQRELFQRADHLLDAFTFAPEVTQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPLFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10055671513300012469Avena Fatua RhizosphereKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDNGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10170293513300012469Avena Fatua RhizosphereMAAPNLPVPAPAKLPLALSQELWEGLTPTQRELFQRADHLLDAFTFQPQLAQSLDDLVEQSGDDADDVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10354214313300012469Avena Fatua RhizosphereILDLSGTGIDKLPLALSPELWEALTPTQRELFERADHLLDAFTGYPEEGQSLDELIEKSGDNADEVLSALRLLDNMSLVNVEPSDEGPVFWLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150984_10516119013300012469Avena Fatua RhizosphereELFQRADLLLDTFTFAPEVEQSLDDLLEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10651460513300012469Avena Fatua RhizosphereTDKLPLALSPELWEALTPSQRELFARADHLLDAFTGDPEEGQSLDELIEKSGDNADEVLSALRLLDNMSLVNVESSDEGPVFWLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150984_10721969113300012469Avena Fatua RhizosphereQFPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10760328513300012469Avena Fatua RhizospherePQSPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVEPSEDGPIFSLRATPEEHLRINGPDNKPRWVFIARPVEPKDVDPSSLN*
Ga0150984_10806117513300012469Avena Fatua RhizosphereQVPVSTPEKLPLALSPELWEALTPTQKELFKRADHLLDAFTFQPELEQSLDDLVEKSGDDADEVLSALRLLDTMALVNIESSDDGPVFSLRATPEEHVRIQGPDNKPRWVFIARPVEPRDVDPNTLN*
Ga0150984_10958616413300012469Avena Fatua RhizosphereSSDLVSSALSRNAGKLPLALSQELWEALTPTQRELFQRADHLLDAFTFAPEVTQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPLFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_10990939223300012469Avena Fatua RhizosphereEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_11145874913300012469Avena Fatua RhizospherePHIPVSTPEKLPLALSPELWEALTPTQKELFQRADHLLDAFTFQPELEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPLFSLRATPEEHVQIKGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_11180641813300012469Avena Fatua RhizosphereKAPAVAAPAARGVSVDTGTAVLTFSRMTATHFPVASHDKLPLALSPELWEALTPTQRELFERADHLLGEFTFNPELPQSLDDLVEKSGDDADDVLSALRLLDTMSLVNVEASEDGPIFSLRATPEEHVRIQGPDNKPRWVFIARPVEAKDVDPSALN*
Ga0150984_11291301413300012469Avena Fatua RhizosphereQAPVSSLERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGSDADEVLSALRLLDNMALVNVESSEDGPVFSLRATPEEHLRINGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_11436321713300012469Avena Fatua RhizosphereVAHPPVSTLEKLPLALSQELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSEDGPIFSLRATPEEHMRIQGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_11449456923300012469Avena Fatua RhizosphereMLTFSRMAALNSPVLTPAKLPLALSPELWEGLTPSQRELFQRADHLLDAFTFEPQLAQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSEDGPVFSLRATPEEHVRIQGPDNKPRWVFIARPIEPKDVDPSTLN*
Ga0150984_11755824413300012469Avena Fatua RhizosphereKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN*
Ga0150984_11854001913300012469Avena Fatua RhizosphereHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPEAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDEGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150984_11963260313300012469Avena Fatua RhizosphereHVPVSIHGKLPLALSQELWEALTPTQRELFQRADHLLDTFTFQPELAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN*
Ga0150984_11989142623300012469Avena Fatua RhizospherePQSSVPTLEKLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGNDADEVLSALRLLDNMALVNVESSEDGPIFSLRATPEEHMRIKGPDNKPRWVFIARPFEPRDVDPSTLN*
Ga0157282_1036992313300012904SoilLSPELWEALTPSQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNIESSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0157310_1008827213300012916SoilMAASHPPVSMPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPERAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0137407_1022239313300012930Vadose Zone SoilMAAPQFSVSTLEKLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGNDADEVLSALRLLDNMALVNVESSEDGPIFSLRATPEEHMRIKGPDNKPRWVFIARPVEPRDVDPSTLN*
Ga0164241_10000263863300012943SoilMPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPEQTQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPTEEGPLFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN*
Ga0164241_10000842183300012943SoilMAVPNTAVPTPAKLPLALSQELWEGLTPTQRELFQRADHLLDAFTFDPRLAQSLDDLVEKSGDDADDVLSALRLLDTMALVNVEPSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPIEPREVDPSTLN*
Ga0164241_1001643423300012943SoilMLSFLGMAAPQVPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0164308_1036587923300012985SoilMAAPNLRVPAPAKLPLALSQELWEGLTPTQRELFQRADHLLDAFTFQPQLTQSLDDLVEQSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVERRDVDPSTLN*
Ga0164307_1003609523300012987SoilMAAPNLPVPAPAKLPLALSQELWEGLTPTQRELFQRADHLLDAFTFQPQLTQSLDDLVEQSGDDADDVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVERRDVDPSTLN*
Ga0164306_1001969323300012988SoilMAAPNLPVPAPAKLPLALSQELWEGLTPTQRELFQRADHLLDAFTFQPQLSQSLDDLVEQSGDDADDVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN*
Ga0163144_1003376773300015360Freshwater Microbial MatTPTQRELFQRADSLLETFAPESPQRLQDIVSSNGGDPSDVLSALRLLDTMALVSIESSAHGPIFSLKATPEEHVRINGPDNKPRWVFIARPVEPRNVDPSTLN*
Ga0163144_1105352413300015360Freshwater Microbial MatMAVPHFSVRTPAKLPLALSRELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0190275_1020166623300018432SoilMNASHFSVLQHDRRPLALSQELWEALTPTQQALFQRADHLLDTFTPDPESPQSLEDLVEKSGDDADEVLSALRLLDTMALVSVESSDQGPVFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPATLN
Ga0184647_132199713300019263Groundwater SedimentTPEKLPLALSPELWQALSPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVERRDVDPSTLN
Ga0184642_124366813300019279Groundwater SedimentQFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0193692_100584723300020000SoilMAAPHLPVSTPEKLPLALSPELWDALTPTQRELFQRADHLLDTFTFAPEVEQSLEDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPVFSLRATPEEHVRIQGPDRKPRWVFIARPVEPRDVDPSTLN
Ga0193753_1017705123300020034SoilMLSFSSMAVPQVPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEAEQSLDDLVEKSGDDADQVLSALRLLDTMALVNVESSEDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPIEPRDVDPNTLN
Ga0206352_1085952113300020078Corn, Switchgrass And Miscanthus RhizosphereTTEKLPLALSQELWEALTPTQRELFQRADHLLDAFTFDPASTQSLDDLVEQSGDDADEVLSALRLLDTMALVNVESSEEGPIFSLRATPEEHVRITGPDNKPRWVFIARPVEPRDVDPSTLN
Ga0163147_1005404313300020192Freshwater Microbial MatVDRAGAVLRLSLMSASQNMFLATEKLPLALSPELWEALTPTQRELFQRADSLLETFAPESPQRLQDIVSSNGGDPSDVLSALRLLDTMALVSIESSAHGPIFSLKATPEEHVRINGPDNKPRWVFIARPVEPRNVDPSTLN
Ga0163152_1028475423300020213Freshwater Microbial MatFLATEKLPLALSPELWEALTPTQRELFQRADSLLETFAPESPQRLQDIVSSNGGDPSDVLSALRLLDTMALVSIESSAHGPIFSLKATPEEHVRINGPDNKPRWVFIARPVEPRNVDPSTLN
Ga0179958_106375013300021315Vadose Zone SoilQFSVSTLEKLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGNDADEVLSALRLLDNMALVNVESSEDGPIFSLRATPEEHMRIKGPDNKPRWVFIARPVESKDVDPSTLN
(restricted) Ga0224723_102565313300021517Freshwater SedimentMLKPSASAPRHAAGVDMARCVLTLRFMSAQHIEVGASDKLPLALSEELWEALTPSQKELFQRADTLLDSFDVESPQSLQQLVSASGDDPSDVLSALRLLDTMSLVSVEASEQGPVFSLRATPEEHVRINGPDNKPRWVFIARPVSPPTVDPAQLN
Ga0207667_10000320133300025949Corn RhizosphereMAASHPPVSIHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPEAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEAKDVDPKSLN
Ga0207658_1108003513300025986Switchgrass RhizosphereTNLTVSTTEKLPLALSQELWEALTPTQRELFQRADHLLDAFTFDPASTQSLDDLVEQSGDDADEVLSALRLLDTMALVNVESSEEGPIFSLRATPEEHVRITGPDNKPRWVFIARPVEPRDVDPSTLN
Ga0207675_10026642133300026118Switchgrass RhizosphereMLTYFGMAAINLPVSASEKLPLALSQELWEALTPTQRALFQRADHLLDAFTFAPQAAHSLDDLVEKSGDDADEVLSALRLLDTMALVSVEPSEDGPIFSLRATPEEHVRITGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0268266_1168182313300028379Switchgrass RhizosphereTPEKLPLALSQELWEALTPTQQELFQRADHLLDTFTFAPEQEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVETSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPRDVDPNTLN
Ga0307288_1035596013300028778SoilDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPQAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDEGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPRTLN
Ga0307515_1016797033300028794EctomycorrhizaMSAPQFPASTPEKLPLALSQELWEALTPTQQELFQRADHLLGEFTFAPERAQSLDDLVEKSGNDTDDVLSALRLLDTMALVNVENSDDGPIFSLRATPEEHVRIKGPDNKHRWVFIARPVEPRDVDPNTLN
Ga0311332_1076895513300029984FenMAASHSPVLTPAKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN
Ga0311336_1108289913300029990FenMAASHSPVLTPAKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN
Ga0307482_129066313300030730Hardwood Forest SoilPVPSPAKLPLALSQELWEGLTKTQRELFQRADHLLDAFTFYPHVVQSLDDLVERSGDDADDVLSALRLLDTMALVNVEPSEDGPVFSLRATPEEHVRIKGPDNKPRWVFIARPIEPKDVDPSTLN
Ga0308200_110254413300030905SoilQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308200_114904113300030905SoilHVSSHDKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVVQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDRKPRWVFIARPVEPRDVDPSTLN
Ga0308183_106856913300030988SoilPVSTPNKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPELAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIESSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0308189_1009209313300031058SoilPAAAGLAVPQFPVLTPDKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308189_1009209323300031058SoilDKLPLALSQELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308189_1020283813300031058SoilTSSANPPVSIHDKLPLALSQERWEALTPSQRELFQRADHLLDTFTFEPQAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDEGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPRTLN
Ga0308189_1038329313300031058SoilPHLPVSTPEKLPLALSVELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDAHEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDLKPRWVFIARPVEPRDVDPSTLN
Ga0308192_103530213300031082SoilKLPLALSPELWEALTPAQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308201_1034827313300031091SoilSSVSTVERLPLALSPELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGDDADEVLSALRLLDNMALVNVESSEDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPSTLN
Ga0308201_1042038313300031091SoilTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308204_1009046013300031092SoilHSPVSAPERLPLALNQELWESLTPTQQALFQRADHLLDTFAPNPEATLSLEDLVEKSGDDANEVLSALRLLDTMALVSVEASDAGPVFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPASLN
Ga0308204_1028460813300031092SoilDKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0308195_108143313300031123SoilPVSIHDKLPLALSQELWEALTPSQRELFQRADHLLDTFTFEPQAAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDEGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPRTLN
Ga0302323_10078592723300031232FenMAASHSPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVEPSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN
Ga0307513_1109638113300031456EctomycorrhizaAVVSGLGAAGPRPGAAVDTAGPVLTFTRMSAPQFPASTPEKLPLALSPELWEALTPTQQQLFQRADHLLDTFTFAPEQEQSLDDLVEKSGDDAHEVLSALRLLDTMALVNVETSDDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPNTLN
Ga0311364_1126934613300031521FenMAASHSPVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGNDADDVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIQGPDKKPRWVFIARPVEPKDVDPSTLN
Ga0307508_10000993233300031616EctomycorrhizaVALRTAAVDTAGPVLTFSRMAVSHPPVSTLEKLPLALSQELWEALTPTQRELFERADHLLGEFTFNPELAQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSEDGPIFSLRATPEEHMRIQGPDNKPRWVFIARPVEPRDVDPNTLN
Ga0307516_10007140133300031730EctomycorrhizaMAVSHPPVSTLEKLPLALSRELWEALTPTQRELFQRADHLLGEFTFNPELAQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSEDGPIFSLRATPEEHMRIQGPDNKPRWVFIARPVEPRDVDPNTLN
Ga0307412_1191497613300031911RhizospherePVDSVRPVLSFSGMAAPQFPVSNPEKLPLALSPELWDALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGEGADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0310811_1045047813300033475SoilMARPVLTFSSMAAPQIPTPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTVSPDEAQSLDDLVEKSGDDADDVLSALRLLDTMALVTVEPSEEGPIFSLRATPEEHVRIQGPDNKPRWVFIARPV
Ga0314780_043045_3_3833300034659SoilPPVSTPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPQLAQSLDDLVEKSGDEADDVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0314780_084539_41_3853300034659SoilLSPELWEALTPSQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNIESSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0314780_141491_208_5853300034659SoilPASTPEKLPLALSQELWEALTPTQQELFQRADHLLDAFTFDPELSQSLDDLVEKSGNDADDVLSALRLLDTMALVNVESSDDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPREVDPTTLN
Ga0314780_182821_3_3773300034659SoilVLTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0314780_187481_140_5203300034659SoilMSITGPAKLPLALSQELWEALTPTQQALFERADNLLDAFTFQPEVAQSLDDLVEKSGDDADEVLSALRLLDTMALVNVEPSDDGPIFSLRATPEEHVRIKGPDNKPRWVFIARPVEPRDVDPSTLN
Ga0314781_038670_1_3783300034660SoilPVSTPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPQLAQSLDDLVEKSGDEADDVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0314781_119587_2_3883300034660SoilPQFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0314781_142282_2_3613300034660SoilKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0314781_152310_3_4043300034660SoilQFPVSTPEKLPLALSPELWEALTPTQRELFQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADEVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLNCYLVLG
Ga0314782_057336_3_3863300034661SoilQPPVSTPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPQLAQSLDDLVEKSGDEADDVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN
Ga0314782_162746_177_5543300034661SoilPVSTPEKLPLALSPELWEALTPTQRELCQRADHLLDTFTFAPEVEQSLDDLVEKSGDDADDVLSALRLLDTMALVNVESSDDGPVFSLRATPEEHVRIQGPDKKPRWVFIARPVEPRDVDPSTLN
Ga0314783_105502_220_5883300034662SoilMPDKLPLALSPELWDALTPTQRELFQRADHLLDTFTFQPERAQSLDDLVEKSGDEADEVLSALRLLDTMALVNIEPSDDGPIFSLRATPEEHVRIQGPDKKMRWVFIARPVEPKDVDPSTLN

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