Metagenome / Metatranscriptome Family F069530

Basic Information
Family ID	F069530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	123
Average Sequence Length	60 residues
Representative Sequence	VGTPILAGVSPTKQMREALVEETMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY
Number of Associated Samples	14
Number of Associated Scaffolds	123

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.82 %
% of genes near scaffold ends (potentially truncated)	49.59 %
% of genes from short scaffolds (< 2000 bps)	78.05 %
Associated GOLD sequencing projects	13
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (84.553 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat (92.683 % of family members)
Environment Ontology (ENVO)	Unclassified (92.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (92.683 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.55% β-sheet: 0.00% Coil/Unstructured: 61.45%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 123 Family Scaffolds
PF07727	RVT_2	1.63
PF00504	Chloroa_b-bind	0.81
PF03914	CBF	0.81
PF05007	Mannosyl_trans	0.81
PF00069	Pkinase	0.81

COG ID	Name	Functional Category	% Frequency in 123 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.25

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
All Organisms	root	All Organisms	15.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
cellular organisms	root	All Organisms → cellular organisms	15.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	15.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	9.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	8.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	8.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	8.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Bacillariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae	8.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Bacillariophycidae	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae	8.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Naviculales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales	7.32 %
Bacillariales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Naviculaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae	4.88 %
Amphipleuraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae	1.63 %
Bacillariaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Fistulifera	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera	4.88 %
Amphiprora	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora	1.63 %
Pseudo-nitzschia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	84.55 %
Fistulifera solaris	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	4.88 %
Amphiprora paludosa	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa	1.63 %
Pseudo-nitzschia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005824\|Ga0074474_1131476	Not Available	904	Open in IMG/M
3300005827\|Ga0074478_1878731	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	2533	Open in IMG/M
3300005828\|Ga0074475_10222676	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	689	Open in IMG/M
3300005830\|Ga0074473_10242044	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	750	Open in IMG/M
3300005830\|Ga0074473_10755688	Not Available	551	Open in IMG/M
3300005830\|Ga0074473_10862369	Not Available	609	Open in IMG/M
3300005830\|Ga0074473_10875792	Not Available	662	Open in IMG/M
3300005831\|Ga0074471_10893877	Not Available	911	Open in IMG/M
3300015360\|Ga0163144_10054236	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia	7054	Open in IMG/M
3300015360\|Ga0163144_10085287	Not Available	5158	Open in IMG/M
3300015360\|Ga0163144_10110541	Not Available	4292	Open in IMG/M
3300015360\|Ga0163144_10135204	All Organisms → cellular organisms → Eukaryota	3714	Open in IMG/M
3300015360\|Ga0163144_10142385	Not Available	3577	Open in IMG/M
3300015360\|Ga0163144_10158101	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa	3315	Open in IMG/M
3300015360\|Ga0163144_10229986	Not Available	2504	Open in IMG/M
3300015360\|Ga0163144_10230969	Not Available	2496	Open in IMG/M
3300015360\|Ga0163144_10236456	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2452	Open in IMG/M
3300015360\|Ga0163144_10288623	Not Available	2109	Open in IMG/M
3300015360\|Ga0163144_10336121	Not Available	1877	Open in IMG/M
3300015360\|Ga0163144_10412582	Not Available	1600	Open in IMG/M
3300015360\|Ga0163144_10493674	Not Available	1391	Open in IMG/M
3300015360\|Ga0163144_10497588	Not Available	1383	Open in IMG/M
3300015360\|Ga0163144_10523453	Not Available	1328	Open in IMG/M
3300015360\|Ga0163144_10538073	Not Available	1299	Open in IMG/M
3300015360\|Ga0163144_10585190	Not Available	1216	Open in IMG/M
3300015360\|Ga0163144_10585315	All Organisms → cellular organisms → Eukaryota	1216	Open in IMG/M
3300015360\|Ga0163144_10611381	Not Available	1175	Open in IMG/M
3300015360\|Ga0163144_10640139	Not Available	1133	Open in IMG/M
3300015360\|Ga0163144_10685461	Not Available	1074	Open in IMG/M
3300015360\|Ga0163144_10689945	Not Available	1068	Open in IMG/M
3300015360\|Ga0163144_10898915	Not Available	869	Open in IMG/M
3300015360\|Ga0163144_10900918	Not Available	868	Open in IMG/M
3300015360\|Ga0163144_11156780	Not Available	717	Open in IMG/M
3300015360\|Ga0163144_11196209	Not Available	699	Open in IMG/M
3300015360\|Ga0163144_11357944	Not Available	636	Open in IMG/M
3300015360\|Ga0163144_11377805	Not Available	629	Open in IMG/M
3300015360\|Ga0163144_11385082	Not Available	627	Open in IMG/M
3300015360\|Ga0163144_11437292	Not Available	611	Open in IMG/M
3300015360\|Ga0163144_11500040	Not Available	592	Open in IMG/M
3300015360\|Ga0163144_11778237	Not Available	522	Open in IMG/M
3300015360\|Ga0163144_11830944	Not Available	511	Open in IMG/M
3300020057\|Ga0163151_10162029	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	1361	Open in IMG/M
3300020057\|Ga0163151_10268312	Not Available	945	Open in IMG/M
3300020057\|Ga0163151_10389411	Not Available	714	Open in IMG/M
3300020057\|Ga0163151_10548085	Not Available	546	Open in IMG/M
3300020057\|Ga0163151_10551698	Not Available	543	Open in IMG/M
3300020057\|Ga0163151_10552856	Not Available	542	Open in IMG/M
3300020192\|Ga0163147_10079410	All Organisms → cellular organisms → Eukaryota	2279	Open in IMG/M
3300020192\|Ga0163147_10110263	Not Available	1798	Open in IMG/M
3300020192\|Ga0163147_10150202	Not Available	1433	Open in IMG/M
3300020192\|Ga0163147_10171384	Not Available	1300	Open in IMG/M
3300020192\|Ga0163147_10204178	Not Available	1142	Open in IMG/M
3300020192\|Ga0163147_10220071	Not Available	1080	Open in IMG/M
3300020192\|Ga0163147_10318616	Not Available	817	Open in IMG/M
3300020192\|Ga0163147_10346422	Not Available	766	Open in IMG/M
3300020192\|Ga0163147_10372544	Not Available	724	Open in IMG/M
3300020192\|Ga0163147_10378642	Not Available	715	Open in IMG/M
3300020192\|Ga0163147_10381146	Not Available	711	Open in IMG/M
3300020192\|Ga0163147_10392831	Not Available	695	Open in IMG/M
3300020192\|Ga0163147_10432598	Not Available	644	Open in IMG/M
3300020192\|Ga0163147_10484111	Not Available	589	Open in IMG/M
3300020192\|Ga0163147_10490356	Not Available	583	Open in IMG/M
3300020192\|Ga0163147_10495378	Not Available	579	Open in IMG/M
3300020192\|Ga0163147_10496955	Not Available	577	Open in IMG/M
3300020192\|Ga0163147_10562176	Not Available	522	Open in IMG/M
3300020201\|Ga0163154_10098354	Not Available	1816	Open in IMG/M
3300020201\|Ga0163154_10116389	Not Available	1593	Open in IMG/M
3300020201\|Ga0163154_10305936	Not Available	762	Open in IMG/M
3300020201\|Ga0163154_10328530	Not Available	722	Open in IMG/M
3300020201\|Ga0163154_10411586	Not Available	609	Open in IMG/M
3300020203\|Ga0163148_10006439	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	11332	Open in IMG/M
3300020203\|Ga0163148_10020773	All Organisms → cellular organisms → Eukaryota → Sar	5233	Open in IMG/M
3300020203\|Ga0163148_10024307	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales	4738	Open in IMG/M
3300020203\|Ga0163148_10035859	Not Available	3710	Open in IMG/M
3300020203\|Ga0163148_10036570	Not Available	3663	Open in IMG/M
3300020203\|Ga0163148_10067862	Not Available	2430	Open in IMG/M
3300020203\|Ga0163148_10072321	Not Available	2327	Open in IMG/M
3300020203\|Ga0163148_10073461	Not Available	2302	Open in IMG/M
3300020203\|Ga0163148_10093294	Not Available	1952	Open in IMG/M
3300020203\|Ga0163148_10138702	Not Available	1468	Open in IMG/M
3300020203\|Ga0163148_10153228	Not Available	1366	Open in IMG/M
3300020203\|Ga0163148_10162425	All Organisms → cellular organisms → Eukaryota	1309	Open in IMG/M
3300020203\|Ga0163148_10188008	Not Available	1175	Open in IMG/M
3300020203\|Ga0163148_10231847	Not Available	1004	Open in IMG/M
3300020203\|Ga0163148_10248708	Not Available	953	Open in IMG/M
3300020203\|Ga0163148_10289060	Not Available	851	Open in IMG/M
3300020203\|Ga0163148_10378766	Not Available	692	Open in IMG/M
3300020203\|Ga0163148_10386837	Not Available	681	Open in IMG/M
3300020203\|Ga0163148_10469109	Not Available	586	Open in IMG/M
3300020219\|Ga0163146_10043498	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris	3487	Open in IMG/M
3300020219\|Ga0163146_10054531	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Amphipleuraceae → Amphiprora → Amphiprora paludosa	3006	Open in IMG/M
3300020219\|Ga0163146_10194295	All Organisms → cellular organisms → Eukaryota	1286	Open in IMG/M
3300020219\|Ga0163146_10238100	Not Available	1112	Open in IMG/M
3300020219\|Ga0163146_10238882	Not Available	1110	Open in IMG/M
3300020219\|Ga0163146_10321232	Not Available	894	Open in IMG/M
3300020219\|Ga0163146_10476443	Not Available	664	Open in IMG/M
3300020219\|Ga0163146_10496327	Not Available	644	Open in IMG/M
3300020219\|Ga0163146_10507594	Not Available	633	Open in IMG/M
3300020219\|Ga0163146_10580727	Not Available	570	Open in IMG/M
3300020219\|Ga0163146_10606101	Not Available	551	Open in IMG/M
3300020596\|Ga0163149_10033952	Not Available	4156	Open in IMG/M
3300020596\|Ga0163149_10034391	All Organisms → cellular organisms → Eukaryota	4122	Open in IMG/M
3300020596\|Ga0163149_10077588	Not Available	2423	Open in IMG/M
3300020596\|Ga0163149_10093916	Not Available	2129	Open in IMG/M
3300020596\|Ga0163149_10112517	Not Available	1882	Open in IMG/M
3300020596\|Ga0163149_10129227	Not Available	1711	Open in IMG/M
3300020596\|Ga0163149_10131276	All Organisms → cellular organisms → Eukaryota	1692	Open in IMG/M
3300020596\|Ga0163149_10147124	Not Available	1560	Open in IMG/M
3300020596\|Ga0163149_10164743	Not Available	1438	Open in IMG/M
3300020596\|Ga0163149_10266085	Not Available	1006	Open in IMG/M
3300020596\|Ga0163149_10270553	Not Available	993	Open in IMG/M
3300020596\|Ga0163149_10292980	Not Available	933	Open in IMG/M
3300020596\|Ga0163149_10296805	Not Available	924	Open in IMG/M
3300020596\|Ga0163149_10338541	Not Available	833	Open in IMG/M
3300020596\|Ga0163149_10403622	Not Available	723	Open in IMG/M
3300020596\|Ga0163149_10504883	Not Available	601	Open in IMG/M
3300020596\|Ga0163149_10512743	Not Available	593	Open in IMG/M
3300020596\|Ga0163149_10623977	Not Available	502	Open in IMG/M
3300021346\|Ga0210335_1577996	Not Available	712	Open in IMG/M
3300022222\|Ga0226658_10277130	Not Available	758	Open in IMG/M
3300022222\|Ga0226658_10493447	Not Available	544	Open in IMG/M
3300022222\|Ga0226658_10526312	Not Available	523	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.68%
Sediment	Environmental → Aquatic → Sediment	6.50%
Marine	Environmental → Aquatic → Marine	0.81%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	92.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	92.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.50%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.81%

Habitat	Taxonomy	Distribution
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	92.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	6.50%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005824	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.180_BBC	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005828	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBI	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020192	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1	Environmental	Open in IMG/M
3300020201	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP9.P1	Environmental	Open in IMG/M
3300020203	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2	Environmental	Open in IMG/M
3300020219	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP7.G1	Environmental	Open in IMG/M
3300020596	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.G1	Environmental	Open in IMG/M
3300021346	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0074474_11314762	3300005824	Sediment (Intertidal)	VSTPIIAGKSPTKQMREALVKWTMPMDTSIWARNLSSDPFYLANASKSNIVCNKY*
Ga0074478_18787312	3300005827	Sediment (Intertidal)	VSTPIIAGKSPTKQMREALVKWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY*
Ga0074475_102226761	3300005828	Sediment (Intertidal)	TPIIAGKSPTKQMREALVKWTMPMDTSIWARNLSSDPFYLANASKSNIVCNKY*
Ga0074473_102420442	3300005830	Sediment (Intertidal)	VSTPIVAGISPTKQMRKALVEWTMPMDTSIWARNLSSGPFYLAIASKSNIVVNKIKLEKE
Ga0074473_107556882	3300005830	Sediment (Intertidal)	VLRELRSVSTPIIAGKSPTKQMREALVKWTMPMDTSIWAHNLSSDPSYLASASKSNIVCNKY*
Ga0074473_108623691	3300005830	Sediment (Intertidal)	GKSPTKQMREALVKWTMPMDTSIWARNLSSDPFYLAIASKSNIVCNKY*
Ga0074473_108757922	3300005830	Sediment (Intertidal)	PILAGISPTKQMREALLEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY*
Ga0074471_108938771	3300005831	Sediment (Intertidal)	VSTPIIAGKSPTKQMREALVKWTMPMDTSIWARNLSSDPFYLASASKSNIVCNKY*
Ga0163144_100542361	3300015360	Freshwater Microbial Mat	PILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLVIASKSNVVGNKY*
Ga0163144_100852873	3300015360	Freshwater Microbial Mat	MSELRELLSVGTPILAGVSPTKRMPKALVERTMPMDTSIWAHNLSSDPFYLAIASKSNILDNKC*
Ga0163144_101105415	3300015360	Freshwater Microbial Mat	VGTPILAGVSPTKQMREALVERTIPMDTSIWARNLSLDPFYLVIASKSNIVDNKY*
Ga0163144_101352041	3300015360	Freshwater Microbial Mat	MRCVNNENNTDKISKLRELRSVGTPILAGASPTKQMRKALVKWTMPMDTSVWARKLSSDRFYLAVASKSNVVDIKY*
Ga0163144_101423854	3300015360	Freshwater Microbial Mat	ISELRELRSVSTPILAGVSPTKQMPEALVERTMPMDTSIRARNLSSDPFYLANASKSNVVDNKY*
Ga0163144_101581014	3300015360	Freshwater Microbial Mat	MSELRELRSLGAPVLAGASPTKQMPEALVEWTMPIDTSIWACDLSLDPFCLAVASKSNVVDNKC*
Ga0163144_102299861	3300015360	Freshwater Microbial Mat	VGTPILVGVSPTKQMREALVDWTMPMDTSIWARNLSLDPFYLAIASKFNIVDNKY*
Ga0163144_102309692	3300015360	Freshwater Microbial Mat	MSELRELWSVSTPILAGASPTKQIPEALVERTMPMDTSIWARNLSLDPFCLAIASESYVVDNKY*
Ga0163144_102364561	3300015360	Freshwater Microbial Mat	LRENNTDNMPELQELRSVGIPILAGLSPTKQMYEALVEWMMPMGTSVWARNLSLDPFYPVYGSKSNIVDDKC*
Ga0163144_102886231	3300015360	Freshwater Microbial Mat	ELRSVGTPILAGVSPTKQMRKALVEWTMLMDTSIWARNLSSDPFYLAITSKSNDVDNKY*
Ga0163144_103361215	3300015360	Freshwater Microbial Mat	MMDASELGELWSLGTPILAGVSPTKQIPEALVERTMPMDASNWARNLSLDPFCLAHASKSNVVDNTC*
Ga0163144_104125823	3300015360	Freshwater Microbial Mat	VGAAILAGVSPTKQMPEALVERTMPMDTSIWARNLLLDPFYLANASKSNVVD
Ga0163144_104936743	3300015360	Freshwater Microbial Mat	MSELRELRSVGTPILAGVSPTKQMRKALIEWTMPMDTSIWARNLSLDPFFLAIASKSNIVDNKY*
Ga0163144_104975881	3300015360	Freshwater Microbial Mat	MDKVSELRELRSVSTPILAGVSPTKQMREALVEWTMPMDTSIWARNPSSDPFYLAIASKSNIVDNKY*
Ga0163144_105234531	3300015360	Freshwater Microbial Mat	VDAPNLAGVSPTKQMRTALVEWTMLMDTSIWARNLSSDPFYLAIASKSNI
Ga0163144_105380731	3300015360	Freshwater Microbial Mat	MVSELRELRSVGTPILAGVSPTQQMPEALVEQTMPMDTSIWARNLSSDPFYLANANKSNIVGNKY*
Ga0163144_105851901	3300015360	Freshwater Microbial Mat	MSELRELRSVNTPILAGVSPTKQMRKALVEWTMPMDTIIWARNLVSDPFYLAVANKSNIVDNKC*
Ga0163144_105853151	3300015360	Freshwater Microbial Mat	VSAPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDN
Ga0163144_106113811	3300015360	Freshwater Microbial Mat	NENNTDKISKLRELRSVGTPILAGVSPTKRMRKALVEWTMPMDTSVWARNLSLDPFYLAIASKSNIVDNKY*
Ga0163144_106401392	3300015360	Freshwater Microbial Mat	VGTPILAGVSPTKQMREALVEETMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163144_106854611	3300015360	Freshwater Microbial Mat	MSELRELWSVGTPVSAGVSPTKQMRKALVEWTMPMDASIWARNLSSDPFYLAVASKSNVVDNKC*
Ga0163144_106899451	3300015360	Freshwater Microbial Mat	VGTPILAGVSPTKQMRKALVEWTMPMDASIWACNLSLDPFYLAITSKSNIVDNKY*
Ga0163144_108989151	3300015360	Freshwater Microbial Mat	MKTKRVKFFGHRELRSVGTPFLAGASPTKQMRKALIEWTMPVDTSIWARNLSSDPFYLAIASKSNIVDNKY*
Ga0163144_109009181	3300015360	Freshwater Microbial Mat	MDKISGLRKLRSVGALILAGVSPTKQMREALVERTMPMDTNIWARNLSSDPFCLAIASESNVVDNKC*
Ga0163144_111567802	3300015360	Freshwater Microbial Mat	SVGTPILAGVSPTKQMHEALVERTMPMDTSIWARNLSLDPFYLAVASKSNIGDNKY*
Ga0163144_111962091	3300015360	Freshwater Microbial Mat	MSELQELRSVGTPILAGVSPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNKY*
Ga0163144_113579441	3300015360	Freshwater Microbial Mat	MSNLRELRSVGTPILAGMSPTKQMRKALVVWTMPMDTSIWAHNLSLDPFYLAIASKSNVVDNKC*
Ga0163144_113778051	3300015360	Freshwater Microbial Mat	VGAPILAGVSPTQQMREALVEQTMLMDTSVWARNLSSDPFYLAIASKSNIVDNK
Ga0163144_113850821	3300015360	Freshwater Microbial Mat	VGTPIAGVSPTKQMPEALVEQTMLMNTRIWARNLSLDPFYLAIASKSNIVDNKY
Ga0163144_114372921	3300015360	Freshwater Microbial Mat	VSTPILAGASPTKQMRKALVEQTMPMDTSIWARNLSSDPFCLAIASESNVVDNKH*
Ga0163144_115000401	3300015360	Freshwater Microbial Mat	ENNTDKISNLRELRSVSTPILAGVPPTKQMSKALVEWTMPMDTSVWARNLLSDPFYLAIASKSNVVDNKC*
Ga0163144_117782371	3300015360	Freshwater Microbial Mat	LRTWKHCVNNENNTDKISELRELRSVSTPILAGVSPTKQMRKGLVEWTMPMDTSIWARNLSLDPFYLAIASKSNIVDNKYQIRERVRLIYF*
Ga0163144_118309441	3300015360	Freshwater Microbial Mat	ELWSVGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNEY*
Ga0163151_101620291	3300020057	Freshwater Microbial Mat	SECGYSYLAGVSPTKQMRKALVEWTMLMDTSIWARNLSSNPFYLANASKSNVVDNKY
Ga0163151_102683121	3300020057	Freshwater Microbial Mat	VGAPILAGVSPTKQMHEALVERTMPMDTSIWARNLSLDPFYLAVASKSNIGDNKY
Ga0163151_103894111	3300020057	Freshwater Microbial Mat	KISNLRELRSVGTPILAGVSPTKQMHEALVEDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163151_105480851	3300020057	Freshwater Microbial Mat	GIPILAGLSPTKQMYEALVEWMMPMGTSVWARNLSLDPFYPVYGSKSNIVDDKC
Ga0163151_105516981	3300020057	Freshwater Microbial Mat	PILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNEY
Ga0163151_105528561	3300020057	Freshwater Microbial Mat	MSELGELRSVGAPVLAGASPTKQMREALVERAMPMDASIWARNLSLDPFCPAVASKSNVVDNKC
Ga0163147_100794104	3300020192	Freshwater Microbial Mat	IIAGVSPTKQMHEALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163147_101102632	3300020192	Freshwater Microbial Mat	VGTPILAGVSPTKQMRKALVEWTMPMDASIWACNLSLDPFYLAITSKSNIVDNKY
Ga0163147_101502021	3300020192	Freshwater Microbial Mat	MRCVNNENNTDKISKLRELRSVGTPILAGASPTKQMRKALVKWTMPMDTSIWARNLSSDRFYLAVASKSNVVDIKY
Ga0163147_101713841	3300020192	Freshwater Microbial Mat	VSIPILAGVPPTKQMPEALIERTMPMDASSWARNLSLDPFYLACASKSNVVDNKC
Ga0163147_102041781	3300020192	Freshwater Microbial Mat	LRELRSVSTPILAGASPTKQMREALVEWTMPMDTSIWARNLSSDPFCLVIASKSNVVGNK
Ga0163147_102200711	3300020192	Freshwater Microbial Mat	VDTPVLAGVSPTKQMREALVEWTMPMDTSVWAHNLSSDPFYLAIASKSNVVDNKY
Ga0163147_103186161	3300020192	Freshwater Microbial Mat	MSELRELLSVGTPILAGVSPTKRMPKALVERTMPMDTSIWAHNLSSDPFYLAIASKSNILDNKY
Ga0163147_103464221	3300020192	Freshwater Microbial Mat	VDKISKLRELWNVGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLLSDPFYLAIASKSNVVDNKY
Ga0163147_103725441	3300020192	Freshwater Microbial Mat	VDAPNLAGVSPTKQMRTALVEWTMLMDTSIWARNLSLDPFYLAIASKSNIVDNKY
Ga0163147_103786421	3300020192	Freshwater Microbial Mat	LQITRTHRHQLGTPILAGASPTKQMHEALVERTMAMDASIWACDLLSDPFCLAIASKSNVVDDKC
Ga0163147_103811461	3300020192	Freshwater Microbial Mat	VGTPILAGASPTKQMHEALVEWTMPMDTRVWARNLSLDTFYLAMIASTSNIVDNKYXIRERVRLIYFXI
Ga0163147_103928311	3300020192	Freshwater Microbial Mat	LRSVSTPILAGVSPTKQMRKALVEWTMPMDASVWARNLSSDPFYLAIANKSNIFDNKY
Ga0163147_104325981	3300020192	Freshwater Microbial Mat	DKISKLXELWSVGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNEY
Ga0163147_104841111	3300020192	Freshwater Microbial Mat	VGTPILAGVSPTKQMREALVERTIPMDTSIWARNLSLDPFYLVIASKSNIVDNKY
Ga0163147_104903561	3300020192	Freshwater Microbial Mat	VGTPILAGLSPTKQMYEALVEWMMPMGTSVWARNLSLDPFYPVYGSKSNIVDDKC
Ga0163147_104953781	3300020192	Freshwater Microbial Mat	ILAGASPTKQMRKALVEWTMPMDKSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163147_104969551	3300020192	Freshwater Microbial Mat	MPELQELRSVGIPILAGLSPTKQMYEALVEWMMPMGTSVWARNLSLDPFYPVY
Ga0163147_105621762	3300020192	Freshwater Microbial Mat	VWVLLFLAGVSPTKQMCKALVEWTMPMDTSIWARNLSSDPFYLTIASKSNIVDN
Ga0163154_100983541	3300020201	Freshwater Microbial Mat	PIAGVSPTKQMPEALVEQTMLMNTRIWARNLSLDPFYLAIASKSNIVDNKY
Ga0163154_101163892	3300020201	Freshwater Microbial Mat	VSTPILAGASASPTKQMPEALVERTMPMDTSIWARNLSSDPFNLAIANKSNIVDNKC
Ga0163154_103059361	3300020201	Freshwater Microbial Mat	VGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNEY
Ga0163154_103285302	3300020201	Freshwater Microbial Mat	VDTPVLAGVSPTKQMREALVEWTMSMDTSVWAHNLSSDPFYLAIASKSNVVDNKY
Ga0163154_104115862	3300020201	Freshwater Microbial Mat	MPELQELRSVGTPILAGLSPTKQMYEALVEWMMPMGTSVWARNLSLDPFYPVYGSKSNIVDDKC
Ga0163148_1000643911	3300020203	Freshwater Microbial Mat	MDKISELRELRSVGTPILAGVSPTKQMREALVERTMPMDTSIWARNLSSDPFYLASYC
Ga0163148_100207737	3300020203	Freshwater Microbial Mat	MNESNTNKMSELRELRSVSAPILAGASPTKQMPEALVERTMPTDTSNWARNLSSDPFYPAIASKSNVVDNKY
Ga0163148_100243072	3300020203	Freshwater Microbial Mat	VSTPILAGVSPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDKKY
Ga0163148_100358592	3300020203	Freshwater Microbial Mat	VSTPILAGVSPTKQMRKALVEWTMPMDKNIWAHNLSSDPFYLAIASKSNVADNKY
Ga0163148_100365705	3300020203	Freshwater Microbial Mat	VGTPILAGASTTKQMPEALVEQTMPIDTNIWARNLSSDPFYLAIARKSNVVDNKY
Ga0163148_100678622	3300020203	Freshwater Microbial Mat	MVSELRELRSVGTPILAGVSPTQQMPEALVEQTMPMDTSIWARNLSSDPFYLANANKSNIVGNKY
Ga0163148_100723211	3300020203	Freshwater Microbial Mat	VGTPILAGASPTKQMHEALVEQPMPMDTSVWARNLSLDPFYLAIASTSNI
Ga0163148_100734611	3300020203	Freshwater Microbial Mat	MSKLQELRSVGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLANASKSNIVDNKC
Ga0163148_100932943	3300020203	Freshwater Microbial Mat	VGTPILAGLSPTKQLRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIIDNKY
Ga0163148_101387022	3300020203	Freshwater Microbial Mat	MSELQELRSVGTPILAGVSPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDNKY
Ga0163148_101532281	3300020203	Freshwater Microbial Mat	MSELRELWSVGTPVSAGVSPTKQMRKALVEWTMPMDASIWARNLSSDPFYLAVASKSNVVDNKC
Ga0163148_101624252	3300020203	Freshwater Microbial Mat	VSTPILAGASPTKQMRKALVEQTMPMDTSIWARNLSSDPFCLAIASESNVVDNKH
Ga0163148_101880081	3300020203	Freshwater Microbial Mat	SVSTPILAGVSPTKQMREALVEQTMPMDTSVWAHNLSSDPSYLTVVSKSNVVDNKC
Ga0163148_102306711	3300020203	Freshwater Microbial Mat	GVSPTKQMREALVEWMMPMDTSIWARILSSDPFYLTVASKSNVVDNKY
Ga0163148_102318471	3300020203	Freshwater Microbial Mat	MKTKRVKFFGHRELRSVGTPFLAGASPTKQMRKALIEWTMPVDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163148_102487082	3300020203	Freshwater Microbial Mat	MDKTSGLRKLRSVGAPILAGVSPTKQMREALVERTMPMDTNIWARNLSSDPFCLAIASESNVVDNKC
Ga0163148_102890601	3300020203	Freshwater Microbial Mat	SVGTPILAGVSPTKQMREALVEWTMPMDTNIWARNLSLDPFYLAIASKSNVVDNKC
Ga0163148_103787662	3300020203	Freshwater Microbial Mat	VGTPILAGASPTKQMHEALVEWTMPMDTRVWARNLSLDTFYLAMIASTSNIVDNKY
Ga0163148_103868371	3300020203	Freshwater Microbial Mat	VWVLLFLAGASPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163148_104691091	3300020203	Freshwater Microbial Mat	MSNLRELWSVGTPILAGASPTKQMREALVEQTMPMDASIWARNLSSDPFYLAIASKSNIVDNKC
Ga0163146_100434981	3300020219	Freshwater Microbial Mat	IIKLLAAKIVLLQKVWVLGTPILAGVSPTKQMHEALVEWTMPMDTRIWARNLSSDPFYLAIASKSNVVDKKH
Ga0163146_100545312	3300020219	Freshwater Microbial Mat	MSELRELRSLGAPVLAGASPTKQMPEALVEWTMPIDTSIWACDLSLDPFCLAVASKSNVVDNKC
Ga0163146_101942951	3300020219	Freshwater Microbial Mat	VSTPILAGASLTKQMREALVEWTMPMDASIWARNLLSDPFYLAIVSKSNVVDNK
Ga0163146_102381001	3300020219	Freshwater Microbial Mat	VWVLLFLAGASPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDN
Ga0163146_102388821	3300020219	Freshwater Microbial Mat	MTXNCRVSKENNTDKISKLRELRSVGTPILAGVSPTKQMREALVEWTMLMDASIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163146_103212321	3300020219	Freshwater Microbial Mat	GGESPTKQMAKALGEWTMPMGTSIWARNLSSDPFYLATASKSNVVDNKY
Ga0163146_104764431	3300020219	Freshwater Microbial Mat	VWVLLFLAGVSPTKQMRKALVEWTMPMDTSIWARNLSSDPFYLAIASKSNVVDN
Ga0163146_104963272	3300020219	Freshwater Microbial Mat	MDKMSELRELLSVGTPILAGVSPTKRMPKALVERTMPMDTSIWAHNLSSDPFYLAIASKSNILDNKC
Ga0163146_105075941	3300020219	Freshwater Microbial Mat	VGTPILVGVSPTKQMREALVDWTMPMDTSIWARNLSLDPFYLAIASKFNIVDNKY
Ga0163146_105807272	3300020219	Freshwater Microbial Mat	MSELRELWSVGTPILAGASPTKQIPEALVERTMPMDTSIWARNLSLDPFCLAIAS
Ga0163146_106061011	3300020219	Freshwater Microbial Mat	VDTPILAGLPPTKQMRKALVEWTMPMDTSIWARNLLSNPFYQAIASKSNIVDN
Ga0163149_100339521	3300020596	Freshwater Microbial Mat	VGAPVLAGASPTKQMREALVERAMPMDASIWARNLSLDPFCPAVASKSNVVDNKC
Ga0163149_100343911	3300020596	Freshwater Microbial Mat	MRCVNNENNTDKISKLRELRSVGTPILAGASPTKQMRKALVKWTMPMDTSVWARKLSSDRFYLAVASKSNVVDIKY
Ga0163149_100775881	3300020596	Freshwater Microbial Mat	MSNLRELRSVSTPILAGVSPTKQMREALVESTMPMDTSIWARNLSSDPFYLAIASKSNIVDN
Ga0163149_100939163	3300020596	Freshwater Microbial Mat	TDKISKLRELRSVGTPILAGVSPTKQMREALVEWTMPMDTSIWARNLLSDPFYLAIASKSNVVDNKY
Ga0163149_101125172	3300020596	Freshwater Microbial Mat	VGTPILAGVSPTKQMRKALVEWTMLMDTSIWARNLSSDPFYLDIASKSNIVDNKYYIR
Ga0163149_101292272	3300020596	Freshwater Microbial Mat	MSSLRELRSVSTPVLAGASPTKQMREALVEWTMPIDASIWAHVLSSDPFYLAIASKSNVVDDN
Ga0163149_101312763	3300020596	Freshwater Microbial Mat	VNNENHTDRTSELRELRSVNTPILAGASLTKQMREALVEWTIPMDTSIWARNLSSDPFYLAVASKSNVVDN
Ga0163149_101471241	3300020596	Freshwater Microbial Mat	MSNENNTDKISELRELRSAGTPILAGVSPTKQMRKALVVWTMPMDTSIWARNLSSDPFYLDIASKFNDVDNKY
Ga0163149_101647431	3300020596	Freshwater Microbial Mat	VSNKNNTHKISNLRELWSVSTPILAGVSPTKQMREALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKC
Ga0163149_102660851	3300020596	Freshwater Microbial Mat	MSELRELWSVGTPVSAGVSPTKQMRKALVEWTMPMDASIWAHNLSSDPFYLASASKSNVVDN
Ga0163149_102705531	3300020596	Freshwater Microbial Mat	VGTPILAGMSPTKQMRKALVVWTMPMDTSIWAHNLSLDPFYLAIASKSNVVDNKC
Ga0163149_102929801	3300020596	Freshwater Microbial Mat	MSELRELWSVGTPILAGASPTKQIPEALVERTMPMDTSIWARNLSLDPFCLAIASESYVVDNKY
Ga0163149_102968051	3300020596	Freshwater Microbial Mat	MSELRELRSVGTPVLAGASPTKQMRKALVEWTMPMDTIIWARNLSSDPFYLAVASESNVVDNKC
Ga0163149_103385411	3300020596	Freshwater Microbial Mat	VGTPILAGVSPTKQMRKALVEWTMPMDTSIWARNLSSDPFHLAIASNPMLLITHIKSEKE
Ga0163149_104036222	3300020596	Freshwater Microbial Mat	VGTPILAGVSPTKQMRKALVEWTMLMDTNIWARNLSSDPFYLAITSKSNDVDNKY
Ga0163149_105048832	3300020596	Freshwater Microbial Mat	LRSVGTPILAGVSPTKQMHEALVEWTMPMDTRVWARNLSLDTFYLAMIASTSNIVDNKY
Ga0163149_105127431	3300020596	Freshwater Microbial Mat	MSELXELRSVGTPILAGVSPTKQMRNALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNKY
Ga0163149_106239771	3300020596	Freshwater Microbial Mat	VSTPILAGVSPTKQMRKALVKWTMPMDTSIWARNLSLDPFYLAIA
Ga0210335_15779961	3300021346	Estuarine	VITPIAADVSPTKQMREALVKWTMPMDTIIWARNLSLDPFYLAIASKSNIV
Ga0226658_102771301	3300022222	Freshwater Microbial Mat	VGALILAGVSPTKQMREALVEQTMPMDTSIWARNLSSDPFYLAIARKPNIFY
Ga0226658_104934471	3300022222	Freshwater Microbial Mat	MSELXELRSVGTPILAGVSPTKQMRNALVEWTMPMDTSIWARNLSSDPFYLAIASKSNIVDNP
Ga0226658_105263121	3300022222	Freshwater Microbial Mat	MDKISELXELQSVGTPILAGVSPTKQMRKALVEWTMPMDTSIWARDLSSDPFYLAIASKSNVVDNKY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign