NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F069467

Metagenome / Metatranscriptome Family F069467

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F069467
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 44 residues
Representative Sequence MRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGRSQAEVARQL
Number of Associated Samples 79
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 34.68 %
% of genes near scaffold ends (potentially truncated) 91.94 %
% of genes from short scaffolds (< 2000 bps) 81.45 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (70.968 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.548 % of family members)
Environment Ontology (ENVO) Unclassified
(42.742 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(29.032 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.30%    β-sheet: 0.00%    Coil/Unstructured: 50.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF13546DDE_5 10.48
PF13565HTH_32 3.23
PF13384HTH_23 3.23
PF08281Sigma70_r4_2 2.42
PF12680SnoaL_2 2.42
PF04542Sigma70_r2 2.42
PF01609DDE_Tnp_1 2.42
PF00589Phage_integrase 2.42
PF04228Zn_peptidase 1.61
PF14355Abi_C 1.61
PF03992ABM 1.61
PF13551HTH_29 1.61
PF08002DUF1697 1.61
PF13191AAA_16 0.81
PF13091PLDc_2 0.81
PF03795YCII 0.81
PF13592HTH_33 0.81
PF14022DUF4238 0.81
PF08751TrwC 0.81
PF13472Lipase_GDSL_2 0.81
PF01636APH 0.81
PF13302Acetyltransf_3 0.81
PF00665rve 0.81
PF02371Transposase_20 0.81
PF00872Transposase_mut 0.81
PF07592DDE_Tnp_ISAZ013 0.81
PF01408GFO_IDH_MocA 0.81
PF07505DUF5131 0.81
PF05506PLipase_C_C 0.81
PF13560HTH_31 0.81
PF14023DUF4239 0.81
PF01965DJ-1_PfpI 0.81
PF13751DDE_Tnp_1_6 0.81
PF01610DDE_Tnp_ISL3 0.81
PF12161HsdM_N 0.81
PF13649Methyltransf_25 0.81
PF01872RibD_C 0.81
PF02518HATPase_c 0.81
PF00391PEP-utilizers 0.81
PF00781DAGK_cat 0.81
PF07883Cupin_2 0.81
PF13340DUF4096 0.81
PF00202Aminotran_3 0.81
PF00884Sulfatase 0.81
PF08378NERD 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 2.42
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 2.42
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.42
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 2.42
COG3293TransposaseMobilome: prophages, transposons [X] 2.42
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 2.42
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 2.42
COG5421TransposaseMobilome: prophages, transposons [X] 2.42
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 2.42
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 2.42
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 1.61
COG2321Predicted metalloproteaseGeneral function prediction only [R] 1.61
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 1.61
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.81
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.81
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.81
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.81
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.81
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.81
COG3464TransposaseMobilome: prophages, transposons [X] 0.81
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.81
COG3547TransposaseMobilome: prophages, transposons [X] 0.81
COG4422Bacteriophage protein gp37Mobilome: prophages, transposons [X] 0.81
COG4584TransposaseMobilome: prophages, transposons [X] 0.81

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.97 %
UnclassifiedrootN/A29.03 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_103272073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1227Open in IMG/M
3300000956|JGI10216J12902_103296380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1395Open in IMG/M
3300000956|JGI10216J12902_112131524All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300000956|JGI10216J12902_121830115All Organisms → cellular organisms → Bacteria → Terrabacteria group733Open in IMG/M
3300001431|F14TB_100050210All Organisms → cellular organisms → Bacteria1781Open in IMG/M
3300005518|Ga0070699_101442799All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005562|Ga0058697_10191756Not Available920Open in IMG/M
3300005985|Ga0081539_10073597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1822Open in IMG/M
3300006058|Ga0075432_10019195All Organisms → cellular organisms → Bacteria2334Open in IMG/M
3300006576|Ga0074047_12069125All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300006577|Ga0074050_11338792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia633Open in IMG/M
3300006581|Ga0074048_12182969Not Available531Open in IMG/M
3300006847|Ga0075431_102122932Not Available516Open in IMG/M
3300006871|Ga0075434_100291317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus1652Open in IMG/M
3300006914|Ga0075436_100462701Not Available925Open in IMG/M
3300009100|Ga0075418_11498399All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300009147|Ga0114129_13447218Not Available507Open in IMG/M
3300009147|Ga0114129_13506044Not Available501Open in IMG/M
3300009162|Ga0075423_10081969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3363Open in IMG/M
3300009799|Ga0105075_1065792All Organisms → cellular organisms → Bacteria → Proteobacteria500Open in IMG/M
3300009804|Ga0105063_1003051All Organisms → cellular organisms → Bacteria → Terrabacteria group1541Open in IMG/M
3300009809|Ga0105089_1007653All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300009809|Ga0105089_1007764All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300009815|Ga0105070_1094811Not Available585Open in IMG/M
3300009817|Ga0105062_1049603All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300009820|Ga0105085_1005025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2196Open in IMG/M
3300009822|Ga0105066_1113170Not Available605Open in IMG/M
3300009823|Ga0105078_1032416All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300009836|Ga0105068_1007596All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300009840|Ga0126313_10021694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae4283Open in IMG/M
3300009840|Ga0126313_10276337All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300009840|Ga0126313_11240265Not Available615Open in IMG/M
3300010037|Ga0126304_11211808Not Available518Open in IMG/M
3300010038|Ga0126315_10148438All Organisms → cellular organisms → Bacteria → Terrabacteria group1386Open in IMG/M
3300010038|Ga0126315_10632863Not Available693Open in IMG/M
3300010041|Ga0126312_10018996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4588Open in IMG/M
3300010041|Ga0126312_10207668All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300010041|Ga0126312_10441094Not Available928Open in IMG/M
3300010041|Ga0126312_10448271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium920Open in IMG/M
3300010041|Ga0126312_10586217Not Available801Open in IMG/M
3300010042|Ga0126314_10037995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3059Open in IMG/M
3300010044|Ga0126310_10110918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1682Open in IMG/M
3300010044|Ga0126310_11791096All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300010166|Ga0126306_10049306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2911Open in IMG/M
3300010301|Ga0134070_10326433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300010329|Ga0134111_10289220Not Available681Open in IMG/M
3300010333|Ga0134080_10357333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae667Open in IMG/M
3300011000|Ga0138513_100004559All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300012021|Ga0120192_10020671Not Available1034Open in IMG/M
3300012201|Ga0137365_10118640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1989Open in IMG/M
3300012204|Ga0137374_10099670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2744Open in IMG/M
3300012204|Ga0137374_10347441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1197Open in IMG/M
3300012204|Ga0137374_10408608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1077Open in IMG/M
3300012204|Ga0137374_10501733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces942Open in IMG/M
3300012204|Ga0137374_10535059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → Plantactinospora mayteni904Open in IMG/M
3300012204|Ga0137374_10720570Not Available747Open in IMG/M
3300012209|Ga0137379_10519441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1098Open in IMG/M
3300012349|Ga0137387_10232483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae1327Open in IMG/M
3300012350|Ga0137372_10082399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2735Open in IMG/M
3300012353|Ga0137367_10062182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2786Open in IMG/M
3300012353|Ga0137367_10091747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2241Open in IMG/M
3300012353|Ga0137367_10208579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1414Open in IMG/M
3300012355|Ga0137369_10008801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia10047Open in IMG/M
3300012355|Ga0137369_10061934All Organisms → cellular organisms → Bacteria3208Open in IMG/M
3300012355|Ga0137369_10207594Not Available1509Open in IMG/M
3300012355|Ga0137369_10238384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1382Open in IMG/M
3300012358|Ga0137368_10029279All Organisms → cellular organisms → Bacteria5023Open in IMG/M
3300012358|Ga0137368_10138791Not Available1813Open in IMG/M
3300012358|Ga0137368_10346476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia989Open in IMG/M
3300012358|Ga0137368_10448145Not Available839Open in IMG/M
3300012532|Ga0137373_10043797All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinilabiliaceae → Anaerophaga → Anaerophaga thermohalophila4218Open in IMG/M
3300012532|Ga0137373_10162270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1874Open in IMG/M
3300014487|Ga0182000_10257149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300017657|Ga0134074_1037632All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300018056|Ga0184623_10176687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia985Open in IMG/M
3300018076|Ga0184609_10011251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3343Open in IMG/M
3300018076|Ga0184609_10015720Not Available2918Open in IMG/M
3300018078|Ga0184612_10402604All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300018081|Ga0184625_10145105Not Available1239Open in IMG/M
3300018466|Ga0190268_11188612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CB03238631Open in IMG/M
3300018476|Ga0190274_10404786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1325Open in IMG/M
3300019377|Ga0190264_11295822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia614Open in IMG/M
3300027056|Ga0209879_1077599All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300027209|Ga0209875_1014909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria913Open in IMG/M
3300027332|Ga0209861_1001862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3178Open in IMG/M
3300027332|Ga0209861_1007715All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300027332|Ga0209861_1020073Not Available996Open in IMG/M
3300027379|Ga0209842_1003892All Organisms → cellular organisms → Bacteria2981Open in IMG/M
3300027490|Ga0209899_1011672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2005Open in IMG/M
3300027718|Ga0209795_10195898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300027952|Ga0209889_1081985Not Available654Open in IMG/M
3300027954|Ga0209859_1018426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1241Open in IMG/M
3300027961|Ga0209853_1128760Not Available626Open in IMG/M
3300028711|Ga0307293_10234665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia583Open in IMG/M
3300028793|Ga0307299_10375668Not Available533Open in IMG/M
3300028811|Ga0307292_10159466Not Available915Open in IMG/M
3300028878|Ga0307278_10033453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin122346Open in IMG/M
3300028878|Ga0307278_10082180Not Available1451Open in IMG/M
3300028878|Ga0307278_10284718Not Available731Open in IMG/M
3300028884|Ga0307308_10138322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1165Open in IMG/M
3300028885|Ga0307304_10137266Not Available1009Open in IMG/M
3300031548|Ga0307408_100871531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Salinibacterium822Open in IMG/M
3300031548|Ga0307408_101298219Not Available682Open in IMG/M
3300031731|Ga0307405_11000013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300031903|Ga0307407_10167081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1445Open in IMG/M
3300031903|Ga0307407_10246140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1222Open in IMG/M
3300031903|Ga0307407_10660058All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300031903|Ga0307407_11679319All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300031911|Ga0307412_11250971Not Available666Open in IMG/M
3300031995|Ga0307409_101285916Not Available756Open in IMG/M
3300031995|Ga0307409_101939470Not Available618Open in IMG/M
3300031995|Ga0307409_102180565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia583Open in IMG/M
3300031995|Ga0307409_102356579All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300032002|Ga0307416_100025760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae4319Open in IMG/M
3300032002|Ga0307416_100179894All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300032002|Ga0307416_100187705All Organisms → cellular organisms → Bacteria1945Open in IMG/M
3300032004|Ga0307414_11622239Not Available603Open in IMG/M
3300032004|Ga0307414_12328196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus → Geodermatophilus obscurus DSM 43160500Open in IMG/M
3300032005|Ga0307411_10220776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1470Open in IMG/M
3300032005|Ga0307411_10431365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.121097Open in IMG/M
3300032126|Ga0307415_100067104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2506Open in IMG/M
3300032126|Ga0307415_100789234All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300032126|Ga0307415_101564031Not Available632Open in IMG/M
3300033550|Ga0247829_11229514Not Available621Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.55%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere17.74%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand16.13%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil12.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.23%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.61%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.81%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009799Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300009815Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027209Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027490Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027718Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10327207313300000956SoilMRPIAYRRNARGLRDRQAFEAVRMRAGALFAAGHSQAEVARTLG
JGI10216J12902_10329638013300000956SoilMRPTAYRRNARGPRDRQALEGVRMQAGALFAAGHPQ
JGI10216J12902_11213152423300000956SoilMRPTAYRRNARGLRDRQAFERVRLEAGELFAAGRSQAEVAHQ
JGI10216J12902_12183011513300000956SoilPTAYRRNARGLRDRQAFEGVRLRAGAVLPAGRSQAEVARQL*
F14TB_10005021053300001431SoilMRPTVYRRNARGPGDRQAFERIRLQAGELFAAGRSQ
Ga0070699_10144279923300005518Corn, Switchgrass And Miscanthus RhizosphereMRPTAYRRNARGLRDRQAFERIRMQAGALFAAGHPQAEVAHQLGVARQNVSRWH
Ga0058697_1019175613300005562AgaveMRPTIYRRNARGLRDRQAFEAIRMQAAALFAAGHSQAQVAHQL
Ga0081539_1007359733300005985Tabebuia Heterophylla RhizosphereMRPTAYRRNARGLRDRQAFEDVRMQAGQLFAAGHTQAQVSRQLGVARQNVSR
Ga0075432_1001919513300006058Populus RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGRSQAEVA
Ga0074047_1206912513300006576SoilMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGRSQAEVALQL
Ga0074050_1133879223300006577SoilMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGRSQAEVAREL
Ga0074048_1218296913300006581SoilMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGRSQA
Ga0075431_10212293223300006847Populus RhizosphereMRPTAYRRNARGLGDRQAFEGVRMRAGALFAAGHSQAEV
Ga0075434_10029131713300006871Populus RhizosphereMRPTAYRRNARGPRDRQAFEQVRMQAGALFAAGHSQAEVARELGVARQ
Ga0075436_10046270113300006914Populus RhizosphereMRPTAYRRNARGPRDRQAFEGVRMQAGQLCAAGRTQAQVARSLGVARQNVSR
Ga0075418_1149839913300009100Populus RhizosphereMRPTAYRRNARGLGDRQAFEGVRMRAGALFAAGHSQA
Ga0114129_1344721823300009147Populus RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGQLFAAGGSQAEVARTLGVARQKAAAGTP
Ga0114129_1350604413300009147Populus RhizosphereMRPTAYRRNARGLRDRQAFEHVRMQAGELFATGRSQAEVARTLGVARQNASR
Ga0075423_1008196963300009162Populus RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVARRLGVARQNV
Ga0105075_106579223300009799Groundwater SandMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGRSQAEVARALGVARQNV
Ga0105063_100305133300009804Groundwater SandMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAQV
Ga0105089_100765343300009809Groundwater SandMIPTAYRRNARGLRDRQAFRGVRMQTGALFAAGHAH
Ga0105089_100776423300009809Groundwater SandMRPTAYRRNARGLGDRQAFEGVRMQAGALFAAGHS
Ga0105070_109481113300009815Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVAHQLGVARQNASR
Ga0105062_104960313300009817Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVAHQLG
Ga0105085_100502513300009820Groundwater SandMRPTAYRRNARGPRDRQAFEHVRMQAGALFADGRSQAEVAHQ
Ga0105066_111317023300009822Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVAHQLGV
Ga0105078_103241623300009823Groundwater SandMGPTAYRRNTRGLRDRQAFEHVRMQAGALFAAGRSQAEVAHQLGVARQNASR
Ga0105068_100759613300009836Groundwater SandMIPTAYRRNARGLRDRQAFRGVRMQTGALFAAGHAH*
Ga0126313_1002169413300009840Serpentine SoilMRPTAYRRNARGPRDRQAFEAVRLQAGALFAAGHTQAQVAHQL
Ga0126313_1027633723300009840Serpentine SoilMRPTAYRRNARGLRDRQAFEGVRMQAGQLFAAGHAQAEVARKPAGGRS*
Ga0126313_1124026523300009840Serpentine SoilMRPTAYRRNARGLRDRQAFERVRLQAGELFAAGRSQAVVARQLF*
Ga0126304_1121180813300010037Serpentine SoilMRPTAYRRNARGLRDRQAFEAVRLQAGELFAAGRSQAEVAHQLGVARQNASR
Ga0126315_1014843813300010038Serpentine SoilMRPTAYRRNARGLGDRQAFEGVRMQAGALFAAGHSQAQ
Ga0126315_1063286313300010038Serpentine SoilMRPTAYRRNARGPRDRQAFEAVRLQAGALFAAGHTQAQVAHQLG
Ga0126312_1001899663300010041Serpentine SoilMRPTAYRRNARGLRDRQAFERIRMQAGELFAAGRSQAEVAHQLGVARQN
Ga0126312_1020766813300010041Serpentine SoilMRPTAYRRNARGPRDRQALEGVRLQAGALFAAGHTQAEVAHQLGVARQNVSR
Ga0126312_1044109423300010041Serpentine SoilMRPTAYRRNARGLRDRQAFEAVRMQAGALFAAGHTQAEVAR
Ga0126312_1044827123300010041Serpentine SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFATGHTQAEVA
Ga0126312_1058621723300010041Serpentine SoilMRPTAYRRNARGLRDRQAFEHIRMQAGELFAAGRSQAQVAH
Ga0126314_1003799533300010042Serpentine SoilMRPTAYRRNARSLRDRQAFEQVRMQAGALFAIGRSQAEVAH*
Ga0126310_1011091823300010044Serpentine SoilMRPIAYRRNARGLRDRQAFERVRLQAGELFAAGRSQA
Ga0126310_1179109613300010044Serpentine SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFATGHTQAEVARQLGVARQNVSR
Ga0126306_1004930613300010166Serpentine SoilMRPTAYRRNARGLRDRQAFERIRLQAGELFAAGRSQAEVARRLG
Ga0134070_1032643313300010301Grasslands SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVARQPG
Ga0134111_1028922013300010329Grasslands SoilMRPTAYRRNARGLRDREAFERIRLQAGELFDAGRSQAEVARE
Ga0134080_1035733323300010333Grasslands SoilMRPTAYRRNARGLRDRQAFEGVRMQAGELFAAGHTQAE
Ga0138513_10000455943300011000SoilMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGRSQAQV
Ga0120192_1002067123300012021TerrestrialMRPTAYRRNARGLRDRQAFEHVRTQAGALFAAGRSQAQA
Ga0137365_1011864023300012201Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHS*
Ga0137374_1009967053300012204Vadose Zone SoilMRPTAYRRNARGLRDRQALEGVRMQAGGLLAAGHAQAQVARQLGVA
Ga0137374_1034744113300012204Vadose Zone SoilMRPTAYRRNGRGPRDRQAFEGVRMQAGALFAAGHSQAWLWR*
Ga0137374_1040860823300012204Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHAQAEV
Ga0137374_1050173313300012204Vadose Zone SoilMRPTAYRRNARGLRDRQAFEHIRMQAGALFAAGHT
Ga0137374_1053505923300012204Vadose Zone SoilMRPTAYRRNARGLRDRQAFEHVRMQAGELFAAGHAQ
Ga0137374_1072057013300012204Vadose Zone SoilTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVACQLGVARQNVSRCHRA*
Ga0137379_1051944123300012209Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMEAGALFAAGHTQAEV
Ga0137387_1023248313300012349Vadose Zone SoilMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVARTLGVARQNVSR
Ga0137372_1008239943300012350Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAQITRTLGVA
Ga0137367_1006218213300012353Vadose Zone SoilMTDLTLSWQHGSMRPTAYRRNARGLRDRQAFEHVRLQAGALFAAGHSQAEVARTLGVARQNVSRWHA
Ga0137367_1009174713300012353Vadose Zone SoilMSWQHGGMRPTAYRHNARGLRDRQAFKHVRMQAGELFAAGRSQAEVAHQLGVARQNASR
Ga0137367_1020857923300012353Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHTQAEVARTLGVA
Ga0137369_10008801123300012355Vadose Zone SoilMRPTAYRRNARGLRDRQAFEHIRMQAGGLFAAGHTQ
Ga0137369_1006193433300012355Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVARQLGVARQNVSRCDRA*
Ga0137369_1020759423300012355Vadose Zone SoilMGRMRPTAYRRNARGLRDRQAFEHIRMQAGALFAAGR
Ga0137369_1023838433300012355Vadose Zone SoilMRPTAYRRNARGLRDRQAFERVRLQAGELFAAVAPR
Ga0137368_1002927913300012358Vadose Zone SoilMRPTAYRRNDRGLRDRQAFEHVRMQAGELFAAGRSQA
Ga0137368_1013879123300012358Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGELFAAGHS
Ga0137368_1034647623300012358Vadose Zone SoilMRPTAYRRNARGLRDRQAFERVRLQAGELFAAVAP
Ga0137368_1044814513300012358Vadose Zone SoilMRPTAYRRNARGLRDHQAFEGSRMQAGALFAAGHSQAEVACQLGVARQNVSRCDRA*
Ga0137373_1004379733300012532Vadose Zone SoilMRPTAYRRNARGLRDRQAFEGVRMQAGAMFAAGHSQAQVAHQLGVARQNVS
Ga0137373_1016227033300012532Vadose Zone SoilMRPTAYRRNARGLRDRQAFEHIRMQAGGLFAAGHTQTQVAHQLGV
Ga0182000_1025714913300014487SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGRSQAEVARQL
Ga0134074_103763213300017657Grasslands SoilMKPIAYRRNARGPRDRQAFEGVRMQAGALFAAGRSQAEVA
Ga0184623_1017668713300018056Groundwater SedimentMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQA
Ga0184609_1001125113300018076Groundwater SedimentMRPTAYRRNARGLGDRQAFEHVRMQAGTLFAAGRSQAEVARTLGVARQNVSR
Ga0184609_1001572033300018076Groundwater SedimentMRPTAYRRNARGLHDRQAFEHVRMQAGALFAAGRSQA
Ga0184612_1040260423300018078Groundwater SedimentMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGHSQAEVA
Ga0184625_1014510513300018081Groundwater SedimentMRPTAYRRNAPGLRDRQAFKGVRMQAGALFAAGHAQAEVARH
Ga0190268_1118861223300018466SoilMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVTRTLGVARQN
Ga0190274_1040478623300018476SoilMRPTAYRRNARGLRDRQALERVRLQAGELFAAGRSQAEVARQLGIARQNVSRQHAQRRWRATAMAA
Ga0190264_1129582223300019377SoilMRPTAYRRNARGPRDRQAFEHVRMQAGALFAAGRS
Ga0209879_107759913300027056Groundwater SandMRPTAYRRNARGLRDRQAFERVRMQAGELFAAGRSQAE
Ga0209875_101490933300027209Groundwater SandMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAQVARQL
Ga0209861_100186253300027332Groundwater SandMTGSGLSWQHGGMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHSQAEVARTLGVARQ
Ga0209861_100771523300027332Groundwater SandMRPTAYRRNARGLGDRQAFEGVRMQAGALFAAGHSQA
Ga0209861_102007323300027332Groundwater SandMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHTQAE
Ga0209842_100389213300027379Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVAHQLGVA
Ga0209899_101167253300027490Groundwater SandMRPTAYRRNARGLVDRQAFEGVRMQAGALFAAGHSQAEVARTLGVARQNVSRWHAR
Ga0209795_1019589813300027718AgaveMRPTTYRRNARGPRDRQAFEGVRMQAGELFAAGHTQAEVARTLGVA
Ga0209889_108198513300027952Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVARALGVARQNVS
Ga0209859_101842623300027954Groundwater SandMRPTAYRRNARGLRDRQAFERIRLQAGELFAAGGSQ
Ga0209853_112876013300027961Groundwater SandMRPTAYRRNARGLRDRQAFEHVRMQAGALFAAGRSQAEVARALGVARQNVSR
Ga0307293_1023466513300028711SoilMRPTAYRRNAPGLRDRQAFKGVRMQAGALFAAGHAQAEVARHLGG
Ga0307299_1037566813300028793SoilMRPTAYRRNARGLRDRQAFEAIRLQAGALFADGHSQAEVARQLGVARQNVSR
Ga0307292_1015946613300028811SoilMRPTAYRSNARGLRDRQAFEGVRMQVGALFAAGHAQA
Ga0307278_1003345343300028878SoilMRPTAYRRNARGLGDRQAFERVRMQAGALFAAGRSQAQVAHQLGVARQNVSRWHA
Ga0307278_1008218023300028878SoilMRPTAYRRNARGPRDRQAFEHVRMQAGALFAAGRSQAEVARILGVAQRTARS
Ga0307278_1028471813300028878SoilMRPTAYRRNARGVRDRQALERVRLQAGALFAAGRSQAEVARELGV
Ga0307308_1013832233300028884SoilMRPTAYRRNARGLRDRQAFEHIRMQAGALFAAGRSQAEV
Ga0307304_1013726613300028885SoilMRPTAYRRNARGLVDRQAFEGVRMQAGALFAAGHTQAEVARTLG
Ga0307408_10087153113300031548RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHTQAQVART
Ga0307408_10129821913300031548RhizosphereMRPTAYRRNARGLGDRQAFEGVRMQAGALFAAGHAQAQVARTLGVARQNVSRWHA
Ga0307405_1100001323300031731RhizosphereMRPIAYRRNARGLRDRQAFERVRLQAGELFAAGRSQAE
Ga0307407_1016708113300031903RhizosphereMRPIAYRRNARGLRDRQAFERVRLQAGELFAAGRSQAEVAASSAS
Ga0307407_1024614013300031903RhizosphereMRPTAYRRNARGLRDRQAFEHIRMQAGALFAAGRSQA
Ga0307407_1066005813300031903RhizosphereMRPTAYRRNARGLRDRQAFEHIRMQAGALFTAGRSQAEVARTLGVA
Ga0307407_1167931913300031903RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGRSQAEVARTLGVARQVVSRWH
Ga0307412_1125097123300031911RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGALFAAGHTQAEVARTLG
Ga0307409_10128591623300031995RhizosphereMRPTAYRRNARGLGDRQAFEAVRMQAGALFAAGHSQAEVARTL
Ga0307409_10193947023300031995RhizosphereMRPSAYRRNARGLRDRQAFEAVRMQAGALFAAGRSQAEV
Ga0307409_10218056513300031995RhizosphereMRPTAYRRNARGLRDRQAFEAVRLQAGALFAAGHTQAQVARQLGVA
Ga0307409_10235657913300031995RhizosphereMRPTAYRRNARGLRDRQAFEGVRMQAGELFTAGHAQAQVARTLGVARQNVSRWHAQ
Ga0307416_10002576013300032002RhizosphereMRPTAYRRNARGPRDRQAFEAVRLQAGALFAAGHTQAEVAHQLGVARQNVSRW
Ga0307416_10017989413300032002RhizosphereMSWQHGDMRPTAYRRNARGLRDRQAFEGVRMRAGALFAAGRYQAEVARTFGVARQNVSR
Ga0307416_10018770533300032002RhizosphereMRPTAYRRNARGLRDRQAFERIRLQAGELFAAGRSQAEVAR
Ga0307414_1162223923300032004RhizosphereMSWQHGDMRPTAYRRNARGLRDRQAFEGVRMRAGALFAAGRYQAEVARTF
Ga0307414_1232819613300032004RhizosphereMRPTAYRRNARGPRDRQAFEAVRRQAGALFAAGHTQAQVAHQLGVARQNVSRWHA
Ga0307411_1022077633300032005RhizosphereMRPTADRRNARGLRDRQAFEAIRLQAGALFAAGHTQAEVARTLGVARQN
Ga0307411_1043136513300032005RhizosphereMRPTAYRRNARGLLDRQAFEHIRMQAGQLFAAGRSQ
Ga0307415_10006710453300032126RhizosphereMRPTAYRRNARGLRDRQAFEGVRLQAGALFAAGHTQAEVARTLGV
Ga0307415_10078923413300032126RhizosphereMRPTAYRRNARGLRDRQAFEHIRMQAGQLFAAGHAQAKVAHQLGVAR
Ga0307415_10156403123300032126RhizosphereMRPSAYRRNARGLRDRQAFEAVRMQAGALFAAGRSQAEVARQL
Ga0247829_1122951423300033550SoilMRPTAYRRNARGLRDRQAFERVRLQAGALFAAGHSQAEVAHQLGVARQN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.