NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069456

Metagenome / Metatranscriptome Family F069456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069456
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 60 residues
Representative Sequence VSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Number of Associated Samples 106
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.39 %
% of genes near scaffold ends (potentially truncated) 33.06 %
% of genes from short scaffolds (< 2000 bps) 76.61 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(22.581 % of family members)
Environment Ontology (ENVO) Unclassified
(27.419 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 59.32%    β-sheet: 5.08%    Coil/Unstructured: 35.59%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF03471CorC_HlyC 43.55
PF02195ParBc 8.87
PF08535KorB 4.84
PF02597ThiS 4.03
PF13614AAA_31 2.42
PF01878EVE 1.61
PF02604PhdYeFM_antitox 0.81
PF00499Oxidored_q3 0.81
PF02913FAD-oxidase_C 0.81
PF08544GHMP_kinases_C 0.81
PF13456RVT_3 0.81
PF10224DUF2205 0.81
PF04893Yip1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG1475Chromosome segregation protein Spo0J, contains ParB-like nuclease domainCell cycle control, cell division, chromosome partitioning [D] 4.84
COG1977Molybdopterin synthase sulfur carrier subunit MoaDCoenzyme transport and metabolism [H] 4.03
COG2104Sulfur carrier protein ThiS (thiamine biosynthesis)Coenzyme transport and metabolism [H] 4.03
COG1673Predicted RNA-binding protein, contains PUA-like EVE domainGeneral function prediction only [R] 1.61
COG2947Predicted RNA-binding protein, contains EVE domainGeneral function prediction only [R] 1.61
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.81
COG0839NADH:ubiquinone oxidoreductase subunit 6 (chain J)Energy production and conversion [C] 0.81
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.81
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_116242281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium741Open in IMG/M
3300001431|F14TB_103526983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium791Open in IMG/M
3300001661|JGI12053J15887_10091449All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300002907|JGI25613J43889_10037022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1384Open in IMG/M
3300004480|Ga0062592_100376883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1117Open in IMG/M
3300004799|Ga0058863_11705634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium569Open in IMG/M
3300005171|Ga0066677_10554936All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi657Open in IMG/M
3300005172|Ga0066683_10276494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1043Open in IMG/M
3300005295|Ga0065707_10291953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1023Open in IMG/M
3300005343|Ga0070687_100488399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium826Open in IMG/M
3300005345|Ga0070692_10006966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4948Open in IMG/M
3300005438|Ga0070701_10165934All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005440|Ga0070705_100739888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium776Open in IMG/M
3300005447|Ga0066689_10017750All Organisms → cellular organisms → Bacteria3418Open in IMG/M
3300005450|Ga0066682_10036440All Organisms → cellular organisms → Bacteria2920Open in IMG/M
3300005468|Ga0070707_100385707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1361Open in IMG/M
3300005518|Ga0070699_102021962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium527Open in IMG/M
3300005536|Ga0070697_101028503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi732Open in IMG/M
3300005545|Ga0070695_100069790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2297Open in IMG/M
3300005549|Ga0070704_100144632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1861Open in IMG/M
3300005558|Ga0066698_10363146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium999Open in IMG/M
3300005578|Ga0068854_100563665All Organisms → cellular organisms → Bacteria → Terrabacteria group968Open in IMG/M
3300005843|Ga0068860_101526396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium690Open in IMG/M
3300006049|Ga0075417_10025981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2383Open in IMG/M
3300006049|Ga0075417_10034136All Organisms → cellular organisms → Bacteria2125Open in IMG/M
3300006049|Ga0075417_10313699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi763Open in IMG/M
3300006049|Ga0075417_10619287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium552Open in IMG/M
3300006844|Ga0075428_100114069All Organisms → cellular organisms → Bacteria2944Open in IMG/M
3300006844|Ga0075428_101383700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium739Open in IMG/M
3300006845|Ga0075421_101662237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi692Open in IMG/M
3300006852|Ga0075433_10117705All Organisms → cellular organisms → Bacteria2358Open in IMG/M
3300006852|Ga0075433_10123866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2296Open in IMG/M
3300006876|Ga0079217_10018766All Organisms → cellular organisms → Bacteria2394Open in IMG/M
3300006894|Ga0079215_10137206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1145Open in IMG/M
3300006904|Ga0075424_101098547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium847Open in IMG/M
3300006918|Ga0079216_10025175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2306Open in IMG/M
3300007004|Ga0079218_11411217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium745Open in IMG/M
3300007004|Ga0079218_13582343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium527Open in IMG/M
3300007255|Ga0099791_10000806All Organisms → cellular organisms → Bacteria11813Open in IMG/M
3300007265|Ga0099794_10341676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium778Open in IMG/M
3300009012|Ga0066710_100211846All Organisms → cellular organisms → Bacteria2769Open in IMG/M
3300009038|Ga0099829_10084436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2439Open in IMG/M
3300009089|Ga0099828_10546763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1044Open in IMG/M
3300009090|Ga0099827_10031125All Organisms → cellular organisms → Bacteria3849Open in IMG/M
3300009137|Ga0066709_100673135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1484Open in IMG/M
3300010039|Ga0126309_10365988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium853Open in IMG/M
3300010400|Ga0134122_10858411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium873Open in IMG/M
3300011269|Ga0137392_11398654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300011270|Ga0137391_10489935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1042Open in IMG/M
3300012096|Ga0137389_10251223All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300012203|Ga0137399_10829663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium778Open in IMG/M
3300012204|Ga0137374_10143511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2147Open in IMG/M
3300012206|Ga0137380_10031552All Organisms → cellular organisms → Bacteria4884Open in IMG/M
3300012207|Ga0137381_10229229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1612Open in IMG/M
3300012209|Ga0137379_10202973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1895Open in IMG/M
3300012210|Ga0137378_10687341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium934Open in IMG/M
3300012351|Ga0137386_11192696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium533Open in IMG/M
3300012353|Ga0137367_10764502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium671Open in IMG/M
3300012355|Ga0137369_10395349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium998Open in IMG/M
3300012356|Ga0137371_10184784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1633Open in IMG/M
3300012358|Ga0137368_10194930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1447Open in IMG/M
3300012358|Ga0137368_10935557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium525Open in IMG/M
3300012360|Ga0137375_11348175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium535Open in IMG/M
3300012685|Ga0137397_10030810All Organisms → cellular organisms → Bacteria3818Open in IMG/M
3300012685|Ga0137397_11014522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium610Open in IMG/M
3300012917|Ga0137395_10779078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium692Open in IMG/M
3300012922|Ga0137394_10048633All Organisms → cellular organisms → Bacteria3495Open in IMG/M
3300012976|Ga0134076_10225162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium793Open in IMG/M
3300014326|Ga0157380_12059983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium633Open in IMG/M
3300015372|Ga0132256_103057055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium562Open in IMG/M
3300017997|Ga0184610_1124478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium833Open in IMG/M
3300018028|Ga0184608_10015733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2667Open in IMG/M
3300018028|Ga0184608_10428503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium572Open in IMG/M
3300018031|Ga0184634_10018634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2602Open in IMG/M
3300018052|Ga0184638_1067768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1306Open in IMG/M
3300018052|Ga0184638_1091533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1115Open in IMG/M
3300018053|Ga0184626_10131513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1064Open in IMG/M
3300018054|Ga0184621_10199031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi718Open in IMG/M
3300018054|Ga0184621_10252066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium629Open in IMG/M
3300018056|Ga0184623_10044524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2018Open in IMG/M
3300018056|Ga0184623_10470625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium540Open in IMG/M
3300018071|Ga0184618_10378976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300018075|Ga0184632_10231929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium809Open in IMG/M
3300018075|Ga0184632_10295047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium702Open in IMG/M
3300018076|Ga0184609_10446025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium595Open in IMG/M
3300018079|Ga0184627_10314327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium821Open in IMG/M
3300018431|Ga0066655_11411158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium506Open in IMG/M
3300018469|Ga0190270_12538110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium575Open in IMG/M
3300021078|Ga0210381_10395912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium510Open in IMG/M
3300021080|Ga0210382_10516340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium529Open in IMG/M
3300021972|Ga0193737_1035897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium710Open in IMG/M
3300022195|Ga0222625_1747490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300022534|Ga0224452_1233256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium564Open in IMG/M
3300025910|Ga0207684_11117960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium655Open in IMG/M
3300025922|Ga0207646_11118385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium693Open in IMG/M
3300025922|Ga0207646_11149722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium682Open in IMG/M
3300025949|Ga0207667_12211829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300026301|Ga0209238_1143489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium746Open in IMG/M
3300026320|Ga0209131_1037331All Organisms → cellular organisms → Bacteria2812Open in IMG/M
3300026324|Ga0209470_1004858All Organisms → cellular organisms → Bacteria8896Open in IMG/M
3300027181|Ga0208997_1074447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium508Open in IMG/M
3300027388|Ga0208995_1050994All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300027633|Ga0208988_1030037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1400Open in IMG/M
3300027637|Ga0209818_1276334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium514Open in IMG/M
3300027639|Ga0209387_1024124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1198Open in IMG/M
3300027645|Ga0209117_1017130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2374Open in IMG/M
3300027655|Ga0209388_1009937All Organisms → cellular organisms → Bacteria2545Open in IMG/M
3300027681|Ga0208991_1198020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium583Open in IMG/M
3300027691|Ga0209485_1012500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1833Open in IMG/M
3300027738|Ga0208989_10012492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2906Open in IMG/M
3300027873|Ga0209814_10016289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2982Open in IMG/M
3300027873|Ga0209814_10046880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1802Open in IMG/M
3300027873|Ga0209814_10410505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium596Open in IMG/M
3300027875|Ga0209283_10552916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium735Open in IMG/M
3300027876|Ga0209974_10088319All Organisms → cellular organisms → Bacteria → Terrabacteria group1073Open in IMG/M
3300027882|Ga0209590_10045397All Organisms → cellular organisms → Bacteria2418Open in IMG/M
3300028718|Ga0307307_10129714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium781Open in IMG/M
3300028796|Ga0307287_10238945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium688Open in IMG/M
3300028814|Ga0307302_10301000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium789Open in IMG/M
3300030997|Ga0073997_10016508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium668Open in IMG/M
3300030997|Ga0073997_12258913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium617Open in IMG/M
3300031965|Ga0326597_10578356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1206Open in IMG/M
3300031965|Ga0326597_11364877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium689Open in IMG/M
3300033407|Ga0214472_10519271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1103Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.58%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment12.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil6.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.65%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.84%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11624228123300000956SoilVSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLMDPRAQQFWVQRWEALAGFVRSLFGGG*
F14TB_10352698323300001431SoilVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLMDPRAQLFWVQRWEALAGFVRSLFGGGS
JGI12053J15887_1009144933300001661Forest SoilVSDQRLSGRGSVVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSXFGGG*
JGI25613J43889_1003702223300002907Grasslands SoilVSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0062592_10037688323300004480SoilVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0058863_1170563413300004799Host-AssociatedVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFG
Ga0066677_1055493633300005171SoilVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0066683_1027649413300005172SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQYWVQRWEALAGFVRSLFGGG*
Ga0065707_1029195323300005295Switchgrass RhizosphereVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGGG
Ga0070687_10048839913300005343Switchgrass RhizosphereEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0070692_1000696673300005345Corn, Switchgrass And Miscanthus RhizosphereGSVMSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGGG*
Ga0070701_1016593433300005438Corn, Switchgrass And Miscanthus RhizosphereVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGF
Ga0070705_10073988823300005440Corn, Switchgrass And Miscanthus RhizosphereVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0066689_1001775033300005447SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0066682_1003644043300005450SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEMLAGFVRSLFGGG*
Ga0070707_10038570733300005468Corn, Switchgrass And Miscanthus RhizosphereVSEQRLSGRASVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0070699_10202196223300005518Corn, Switchgrass And Miscanthus RhizosphereVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWESLAGFVRSLFGGG
Ga0070697_10102850333300005536Corn, Switchgrass And Miscanthus RhizosphereSVMSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGGG*
Ga0070695_10006979013300005545Corn, Switchgrass And Miscanthus RhizosphereVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGGG
Ga0070704_10014463213300005549Corn, Switchgrass And Miscanthus RhizosphereHDLAGTPGQPGGATEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0066698_1036314623300005558SoilVTDLKLSGRSSVVSFVLMTGLVTAAAAGLFVLLDPRSQEYWVQRWEALAGFVRSLFGGG*
Ga0068854_10056366513300005578Corn RhizosphereGQPGGATEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0068860_10152639613300005843Switchgrass RhizosphereSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0075417_1002598123300006049Populus RhizosphereVTDQKLSGRGSVIAFVLMTGLVTAAATGLFVLLDPRAQQFWLQRWETLAGFVRSLFGGG*
Ga0075417_1003413633300006049Populus RhizosphereVSDQKLSGRGSLISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0075417_1031369913300006049Populus RhizosphereRQPRGAPPERPRVSDQKLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWETLAGFVRSLFGGG*
Ga0075417_1061928723300006049Populus RhizosphereVSDQKLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWETLAGFVRSLFGGG*
Ga0075428_10011406953300006844Populus RhizosphereVSDQRLSGRGSLISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0075428_10138370023300006844Populus RhizosphereVSDQKLSGRSSVAYFVLMTGVVTAAATGLFVLMDSRAQQFWVQRWEALVGFVRSVFGGG*
Ga0075421_10166223713300006845Populus RhizosphereEVPDDLARPAGQPGGATPQRPRVSDQKLSGRGSVAYFVLMTGVVTAAATGLFVLMDSRAQQFWVQRWEALVGFVRSLFGGG*
Ga0075433_1011770533300006852Populus RhizosphereVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0075433_1012386623300006852Populus RhizosphereVSDQKLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWETLAGFVRSLFGGG*
Ga0079217_1001876633300006876Agricultural SoilVSDERLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0079215_1013720613300006894Agricultural SoilGQPGRASAERARVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0075424_10109854733300006904Populus RhizosphereLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWETLAGFVRSLFGGG*
Ga0079216_1002517513300006918Agricultural SoilSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0079218_1141121723300007004Agricultural SoilLSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0079218_1358234323300007004Agricultural SoilVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETL
Ga0099791_1000080673300007255Vadose Zone SoilVSDQNLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG*
Ga0099794_1034167623300007265Vadose Zone SoilVSDQNLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGG
Ga0066710_10021184633300009012Grasslands SoilVTDPRLSGRSSIISFVLMTGLVTAAATGLFVLLDPRAQQFWAQRWEALAGFVRSLFGGG
Ga0099829_1008443643300009038Vadose Zone SoilVSDQKLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG*
Ga0099828_1054676323300009089Vadose Zone SoilVSDQRLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG*
Ga0099827_1003112563300009090Vadose Zone SoilDLAGPAGQPGRAPPERPRVTDQKLSGRSSVVSFVLMTGLVTASATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG*
Ga0066709_10067313533300009137Grasslands SoilVTDPKLSGRSSIISFVLMTGLVTAAATGLFVLLDPRAQQFWAQRWEALAGFVRSLFGGG*
Ga0126309_1036598833300010039Serpentine SoilVSDQRLSGRGSVVSFVLMTALVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0134122_1085841123300010400Terrestrial SoilVSDQRLSGRGSVTSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0137392_1139865413300011269Vadose Zone SoilVTDQRLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWLQRWEALAGFVRSLFGGG*
Ga0137391_1048993523300011270Vadose Zone SoilVTDQRLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG*
Ga0137389_1025122313300012096Vadose Zone SoilVSDQKLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFLRSLFGGG*
Ga0137399_1082966333300012203Vadose Zone SoilVSEQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEAFAGFVRSLFGGG*
Ga0137374_1014351123300012204Vadose Zone SoilMTDQKLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0137380_1003155263300012206Vadose Zone SoilVTDQKVSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWAQRWEALAGFVRSLFGGG*
Ga0137381_1022922923300012207Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQYWIQRWEALAGFVRSLFGGG*
Ga0137379_1020297333300012209Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQYWVQRWEMLAGFVRSLFGG*
Ga0137378_1068734123300012210Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEMLAGFV
Ga0137386_1119269623300012351Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQYWVQRWEALAGFVRSLF
Ga0137367_1076450223300012353Vadose Zone SoilMTDQKLSGRGSVISFVLMTGLVTAAATGLFVLIDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0137369_1039534933300012355Vadose Zone SoilVTDQKLSGRGSVISFVLMTGLVTAAATGLFVLIDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0137371_1018478423300012356Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWAQRWEALAGFVRSLFGGG*
Ga0137368_1019493033300012358Vadose Zone SoilGGATEEQPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0137368_1093555723300012358Vadose Zone SoilVTDQKLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLVGFFRSLFGGG*
Ga0137375_1134817513300012360Vadose Zone SoilVSTQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALVGFVRSLFGGG*
Ga0137397_1003081023300012685Vadose Zone SoilVSDQRLSGRGSIVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG*
Ga0137397_1101452233300012685Vadose Zone SoilRASAERPPVSEQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSVFGGG*
Ga0137395_1077907823300012917Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLITAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGA*
Ga0137394_1004863323300012922Vadose Zone SoilVSEQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSVFGGG*
Ga0134076_1022516233300012976Grasslands SoilRVTDQKLSGRSSVVSFVLMTGLVTAAATALFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0157380_1205998333300014326Switchgrass RhizosphereGGATEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG*
Ga0132256_10305705513300015372Arabidopsis RhizosphereVSEQRLSGRGSVISFVLMTGLITAAATVLFVLMDPRAQQFWLQRWESLA
Ga0184610_112447833300017997Groundwater SedimentGQPGRATPERPRVSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0184608_1001573323300018028Groundwater SedimentMSDQRLSGRGSVISFVLMTGLVTGAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGP
Ga0184608_1042850323300018028Groundwater SedimentVSDQRLSGRGSLVSFILMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGF
Ga0184634_1001863433300018031Groundwater SedimentVSDQRLSGRGSLVSFVMMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0184638_106776833300018052Groundwater SedimentVSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0184638_109153323300018052Groundwater SedimentVSEQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0184626_1013151333300018053Groundwater SedimentRAPGQPGRATSARPRVSDQRLSGRGRVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0184621_1019903113300018054Groundwater SedimentTEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGGG
Ga0184621_1025206623300018054Groundwater SedimentVSDQRLSGRGSLVSFILMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0184623_1004452423300018056Groundwater SedimentVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0184623_1047062513300018056Groundwater SedimentGRATPERPRVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0184618_1037897633300018071Groundwater SedimentSGQPGGATEERPRVSDQRLSGRGSVMSFVLMTGLVTTAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0184632_1023192923300018075Groundwater SedimentVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0184632_1029504733300018075Groundwater SedimentVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALSGFVRSLFGGG
Ga0184609_1044602523300018076Groundwater SedimentHDLAGAAGQPGGATEERPRVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0184627_1031432733300018079Groundwater SedimentVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGEG
Ga0066655_1141115823300018431Grasslands SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEMLAGFVRSLFGGG
Ga0190270_1253811013300018469SoilVSEQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAG
Ga0210381_1039591223300021078Groundwater SedimentVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRGLFGGG
Ga0210382_1051634033300021080Groundwater SedimentRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0193737_103589733300021972SoilVSEQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0222625_174749023300022195Groundwater SedimentVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGP
Ga0224452_123325613300022534Groundwater SedimentVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEAL
Ga0207684_1111796013300025910Corn, Switchgrass And Miscanthus RhizosphereVSDQKLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG
Ga0207646_1111838523300025922Corn, Switchgrass And Miscanthus RhizosphereVSGQRLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWLQRWEALAGFVRSLFGGG
Ga0207646_1114972223300025922Corn, Switchgrass And Miscanthus RhizosphereVSEQRLSGRASVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0207667_1221182933300025949Corn RhizosphereDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQLFWVQRWEALAGFVRSLFGGG
Ga0209238_114348923300026301Grasslands SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0209131_103733133300026320Grasslands SoilVSDQRLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0209470_100485843300026324SoilVTDQKLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQYWVQRWEALAGFVRSLFGGG
Ga0208997_107444713300027181Forest SoilVSDQRLSGRGSVVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWEMLAGFVRSLFGGG
Ga0208995_105099413300027388Forest SoilVSDQRLSGRGSLVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWETLVGFLR
Ga0208988_103003723300027633Forest SoilVSDQRLSGRGSVVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSWFGGG
Ga0209818_127633413300027637Agricultural SoilPHDLSRAPGQPCRASSERARVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0209387_102412423300027639Agricultural SoilVSDERLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0209117_101713023300027645Forest SoilVSDQRLSGRGSLVSFVLMTGVVTAAATGLFVLLDPRAQQYWVQRWETLVGFVRSLFGGG
Ga0209388_100993723300027655Vadose Zone SoilVSDQNLSGRSSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG
Ga0208991_119802033300027681Forest SoilQRLSGRGSLVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWETLVGFVRSLFGGG
Ga0209485_101250013300027691Agricultural SoilSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0208989_1001249233300027738Forest SoilVSDQRLSGRGSLVSFVLMTGSVTAAATGLFVLLDPRAQQFWVQRWETLVGFVRSLFGGG
Ga0209814_1001628933300027873Populus RhizosphereVTDQKLSGRGSVIAFVLMTGLVTAAATGLFVLLDPRAQQFWLQRWETLAGFVRSLFGGG
Ga0209814_1004688023300027873Populus RhizosphereVSDQKLSGRGSLISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0209814_1041050513300027873Populus RhizosphereVSDQKLSGRGSVVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWETLAGFVRSLFGGG
Ga0209283_1055291623300027875Vadose Zone SoilVSDQRLSGRSSAVSFVLMTGLVTAAATGLFVLLDPRAQQFWIQRWEALAGFVRSLFGGG
Ga0209974_1008831923300027876Arabidopsis Thaliana RhizosphereVSAQKLSGRGSVISFVLMTAVVTAAATGLFVLLDPRAQQFWVQRWETLAGFFRSLFGGG
Ga0209590_1004539733300027882Vadose Zone SoilVTDQKLSGRSSVVSFVLMTGLVTASATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0307307_1012971423300028718SoilVSDQRLSGRGSVMSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0307287_1023894523300028796SoilVSDQRLSGRGSVTSFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGP
Ga0307302_1030100023300028814SoilVSDQRLSGRGSVISFVLMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGSP
Ga0073997_1001650823300030997SoilVSDQRLSGRGSFVSFILMTGLVTAAATGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0073997_1225891323300030997SoilVSDQRLSGRGSVVSFILMTGLVTAATTGLFVLLDPRAQQFWVQRWETLAGFVRSLFGGG
Ga0326597_1057835633300031965SoilVTDQKLSGRASLAYFVLMTGVVTAAATGLFVLMDSRAQQFWVQRWEALVGFVRALFGGG
Ga0326597_1136487723300031965SoilVSDQRLSGRGSVISFVLMTALVTAAATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG
Ga0214472_1051927123300033407SoilVSDQRLSGRGSVISFVLMTGLVTAGATGLFVLLDPRAQQFWVQRWEALAGFVRSLFGGG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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