NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069388

Metagenome / Metatranscriptome Family F069388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069388
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 60 residues
Representative Sequence ILYSPDRKLAIVDGRIVGVGDEIRGARIVDITPTAVMLRDAQGRLRRLALGASGR
Number of Associated Samples 114
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 12.50 %
% of genes near scaffold ends (potentially truncated) 70.16 %
% of genes from short scaffolds (< 2000 bps) 86.29 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.935 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(12.097 % of family members)
Environment Ontology (ENVO) Unclassified
(22.581 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.194 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 31.33%    Coil/Unstructured: 68.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF05157T2SSE_N 53.23
PF00005ABC_tran 8.87
PF12773DZR 4.84
PF14559TPR_19 0.81
PF00113Enolase_C 0.81
PF00226DnaJ 0.81
PF08352oligo_HPY 0.81
PF00465Fe-ADH 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0148EnolaseCarbohydrate transport and metabolism [G] 0.81
COG03373-dehydroquinate synthetaseAmino acid transport and metabolism [E] 0.81
COG0371Glycerol dehydrogenase or related enzyme, iron-containing ADH familyEnergy production and conversion [C] 0.81
COG1454Alcohol dehydrogenase, class IVEnergy production and conversion [C] 0.81
COG1979Alcohol dehydrogenase YqhD, Fe-dependent ADH familyEnergy production and conversion [C] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.94 %
UnclassifiedrootN/A8.06 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004463|Ga0063356_100247204All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2158Open in IMG/M
3300005093|Ga0062594_102104983All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005169|Ga0066810_10147782All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005177|Ga0066690_10013439All Organisms → cellular organisms → Bacteria4306Open in IMG/M
3300005180|Ga0066685_10031752All Organisms → cellular organisms → Bacteria3274Open in IMG/M
3300005181|Ga0066678_10019358All Organisms → cellular organisms → Bacteria3533Open in IMG/M
3300005184|Ga0066671_10596235All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300005332|Ga0066388_100261164All Organisms → cellular organisms → Bacteria2373Open in IMG/M
3300005334|Ga0068869_100999666All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005336|Ga0070680_101158104All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300005338|Ga0068868_100979333All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300005438|Ga0070701_10541645All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300005440|Ga0070705_101310981All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum601Open in IMG/M
3300005468|Ga0070707_101104279All Organisms → cellular organisms → Bacteria → Proteobacteria759Open in IMG/M
3300005471|Ga0070698_101528602All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005526|Ga0073909_10447083All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005526|Ga0073909_10459805All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300005534|Ga0070735_10767817All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005540|Ga0066697_10784128All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005545|Ga0070695_100518613All Organisms → cellular organisms → Bacteria → Acidobacteria924Open in IMG/M
3300005553|Ga0066695_10183042All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300005559|Ga0066700_10384712All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium990Open in IMG/M
3300005560|Ga0066670_10000382All Organisms → cellular organisms → Bacteria12780Open in IMG/M
3300005569|Ga0066705_10255378All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300005616|Ga0068852_100789933All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300005617|Ga0068859_103107142All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005646|Ga0075040_1682484All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005902|Ga0075273_10117739All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005938|Ga0066795_10174242All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300006034|Ga0066656_11139504All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300006163|Ga0070715_10355885All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300006638|Ga0075522_10117524All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300006755|Ga0079222_12194961All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006881|Ga0068865_100577152All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300006904|Ga0075424_101868985All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300006904|Ga0075424_102841477All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300007076|Ga0075435_100642468All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300009012|Ga0066710_100198456All Organisms → cellular organisms → Bacteria → Acidobacteria2853Open in IMG/M
3300009012|Ga0066710_101353826All Organisms → cellular organisms → Bacteria → Acidobacteria1104Open in IMG/M
3300009012|Ga0066710_101558324All Organisms → cellular organisms → Bacteria → Acidobacteria1015Open in IMG/M
3300009029|Ga0066793_10234091All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300009036|Ga0105244_10583012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenica513Open in IMG/M
3300009089|Ga0099828_11743755All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300009137|Ga0066709_101105621All Organisms → cellular organisms → Bacteria → Acidobacteria1165Open in IMG/M
3300009137|Ga0066709_103962879All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8538Open in IMG/M
3300009143|Ga0099792_10112000All Organisms → cellular organisms → Bacteria → Acidobacteria1451Open in IMG/M
3300009147|Ga0114129_12776858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8582Open in IMG/M
3300009156|Ga0111538_13362007All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300009176|Ga0105242_12749016All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300009662|Ga0105856_1146901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium715Open in IMG/M
3300010304|Ga0134088_10186532All Organisms → cellular organisms → Bacteria → Acidobacteria992Open in IMG/M
3300010335|Ga0134063_10018488All Organisms → cellular organisms → Bacteria → Acidobacteria2856Open in IMG/M
3300010337|Ga0134062_10811798All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300010361|Ga0126378_10581111All Organisms → cellular organisms → Bacteria → Acidobacteria1235Open in IMG/M
3300010362|Ga0126377_11896175All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300010397|Ga0134124_10977969All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300010397|Ga0134124_11497497All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300010399|Ga0134127_10841688All Organisms → cellular organisms → Bacteria → Acidobacteria969Open in IMG/M
3300010400|Ga0134122_12924304All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300011120|Ga0150983_13483801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium888Open in IMG/M
3300011269|Ga0137392_10195870All Organisms → cellular organisms → Bacteria → Acidobacteria1651Open in IMG/M
3300012212|Ga0150985_115388006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9723Open in IMG/M
3300012362|Ga0137361_10784806All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300012363|Ga0137390_10648028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1021Open in IMG/M
3300012469|Ga0150984_100775163All Organisms → cellular organisms → Bacteria → Acidobacteria1204Open in IMG/M
3300012469|Ga0150984_112956565All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300012685|Ga0137397_10775186All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8711Open in IMG/M
3300012913|Ga0157298_10364647Not Available537Open in IMG/M
3300012922|Ga0137394_10218995All Organisms → cellular organisms → Bacteria → Acidobacteria1627Open in IMG/M
3300012924|Ga0137413_11238479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300012931|Ga0153915_11140031All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300012931|Ga0153915_12953208All Organisms → cellular organisms → Bacteria → Proteobacteria554Open in IMG/M
3300012944|Ga0137410_11203431All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8652Open in IMG/M
3300012964|Ga0153916_10190776All Organisms → cellular organisms → Bacteria → Acidobacteria2033Open in IMG/M
3300014325|Ga0163163_12349323Not Available592Open in IMG/M
3300015241|Ga0137418_10402236All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division GN15 → candidate division GN15 bacterium1117Open in IMG/M
3300015371|Ga0132258_13184732All Organisms → cellular organisms → Bacteria → Acidobacteria1132Open in IMG/M
3300017959|Ga0187779_11368249All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300018051|Ga0184620_10048389All Organisms → cellular organisms → Bacteria → Acidobacteria1187Open in IMG/M
3300018071|Ga0184618_10403387All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300018078|Ga0184612_10457685All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300018089|Ga0187774_11323790All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300018468|Ga0066662_11783230All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9644Open in IMG/M
3300018476|Ga0190274_11307737All Organisms → cellular organisms → Bacteria → Acidobacteria812Open in IMG/M
3300018482|Ga0066669_10331871All Organisms → cellular organisms → Bacteria → Acidobacteria1253Open in IMG/M
3300025324|Ga0209640_11254882All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300025326|Ga0209342_10280602All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300025327|Ga0209751_10428904All Organisms → cellular organisms → Bacteria → Acidobacteria1092Open in IMG/M
3300025484|Ga0208587_1033254All Organisms → cellular organisms → Bacteria → Acidobacteria1417Open in IMG/M
3300025899|Ga0207642_10125697All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300025936|Ga0207670_11225874All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300025937|Ga0207669_11877120All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025990|Ga0208527_1046486All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300026222|Ga0209862_1045742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium803Open in IMG/M
3300026275|Ga0209901_1017113All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1840Open in IMG/M
3300026318|Ga0209471_1009985All Organisms → cellular organisms → Bacteria4991Open in IMG/M
3300026319|Ga0209647_1244994All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300026326|Ga0209801_1017948All Organisms → cellular organisms → Bacteria → Acidobacteria3516Open in IMG/M
3300026527|Ga0209059_1047334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1899Open in IMG/M
3300026530|Ga0209807_1268322All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300027787|Ga0209074_10353696All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300027815|Ga0209726_10084949All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1980Open in IMG/M
3300027875|Ga0209283_10566172All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300027903|Ga0209488_10955378All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300028784|Ga0307282_10246380All Organisms → cellular organisms → Bacteria → Acidobacteria858Open in IMG/M
3300028802|Ga0307503_10176309Not Available993Open in IMG/M
3300028812|Ga0247825_10006752All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis7514Open in IMG/M
3300028812|Ga0247825_10031554All Organisms → cellular organisms → Bacteria → Acidobacteria3495Open in IMG/M
3300028819|Ga0307296_10380752All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300028881|Ga0307277_10053562All Organisms → cellular organisms → Bacteria → Acidobacteria1649Open in IMG/M
3300031226|Ga0307497_10492858All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300031231|Ga0170824_117524017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium759Open in IMG/M
3300031366|Ga0307506_10466050Not Available530Open in IMG/M
3300031562|Ga0310886_10658373Not Available648Open in IMG/M
3300031740|Ga0307468_100496732All Organisms → cellular organisms → Bacteria → Acidobacteria966Open in IMG/M
3300031834|Ga0315290_11404614All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300032342|Ga0315286_11651773Not Available608Open in IMG/M
3300033758|Ga0314868_017654All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8753Open in IMG/M
3300034129|Ga0370493_0103338All Organisms → cellular organisms → Bacteria → Acidobacteria913Open in IMG/M
3300034129|Ga0370493_0202847All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.10%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.23%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.23%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil3.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.23%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands2.42%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.42%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil2.42%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.61%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.61%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.61%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.61%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.81%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005646Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_057 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005902Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009662Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025484Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025990Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026222Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)EnvironmentalOpen in IMG/M
3300026275Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300033758Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_AEnvironmentalOpen in IMG/M
3300034129Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063356_10024720423300004463Arabidopsis Thaliana RhizosphereVLGTILYSPDRKLAIVNNRIVGLGDTVNGARIVDITPGTVLLRDPQGRLRSLTLGAVGGLGTAP*
Ga0062594_10210498313300005093SoilSPDRKFAIVNDRIVGPGDEVNGARVVDITPTTVVLRDEKGRLRSLTLGADASRQRPSGR*
Ga0066810_1014778223300005169SoilERQLAIVDGRIVQVGDVVSGARVVDITSTLVLLRDRQGRLRQLGLGPPGR*
Ga0066677_1082533313300005171SoilRASPQPILPKRPETDTPFEAELGTILYSADRKLAIVDGRIVTIGDDVRGTRIVDITPSAVLLRDGHGRLRRLGLSTAGK*
Ga0066690_1001343943300005177SoilLGTILYSADRKLAIVDGRIVTIGDDVRGTRIVDITPSAVLLRDGQGRLRRLGLSTAGK*
Ga0066685_1003175233300005180SoilAELGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK
Ga0066678_1001935813300005181SoilKRPETDTPFEAELGTILYSADQKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGQGRLRRLGLSTAGK*
Ga0066671_1059623523300005184SoilMSFDAALGTILYSPDRKLAIVDGRIVGVGDEVRGARIVDITRTAVMLRDGQGRLRRLALGAPDR*
Ga0066388_10026116423300005332Tropical Forest SoilAVLGTILYSPDRKLAIVDGRIVGPGDEVRGARVIDITPTEVMLKDAQGRLRRLGVAGGR*
Ga0068869_10099966623300005334Miscanthus RhizosphereLGSILYSPDRKLAIVDGRIVGVGDDIRGAKIVEITAGAVMLRDAQGRLRQLTLSNAGR*
Ga0070680_10115810413300005336Corn RhizosphereVPFAAVLGTILYSPDRKLAIVNDRIVGPGDEVNGARIVDITPTSVLLRDAQGRLRVLTLGARTPPAP*
Ga0068868_10097933323300005338Miscanthus RhizosphereRRLAIIDGRIVQVGDQVNGARVVDITSTDVFLRDAQGRLRQLALGLPGR*
Ga0070701_1054164513300005438Corn, Switchgrass And Miscanthus RhizospherePDRKLAIVDNQIVSVGDDVRGARIVEITPGAVMLRDAQGRLRQLTLSHGGR*
Ga0070705_10131098113300005440Corn, Switchgrass And Miscanthus RhizosphereLPGSALPFDAVLGTILYSPGRRLAIVDGGIVAPGDEVRGARILEITPDAVLLRDGQGRLKRLGLGVGVR*
Ga0070707_10110427923300005468Corn, Switchgrass And Miscanthus RhizosphereLPFDASLGTILYSPDRKLAIIDGRIVGVGDEVRGARVTDITPTVVFLRDAQGKLRRLTLAVGR*
Ga0070698_10152860213300005471Corn, Switchgrass And Miscanthus RhizosphereTILYSPDRKLAIVNDRIVGPGDEVNGATIVDITPTTVLLRDVQGRLRSLTLGVRPPAAP*
Ga0073909_1044708313300005526Surface SoilPFDAVLGTILYSPDRKLAIVDGRIVAVGDAVRGAKIVEITAAAVTLRDAQGRLRQLTLSNAGR*
Ga0073909_1045980513300005526Surface SoilVLGTILYSPERKLAIINGRIVSPGDEVNGARIVDITETTVVLRDAQGRLRNLTLGGRTPP
Ga0070735_1076781723300005534Surface SoilPGSPLLSSALPFDAVLSAILYSPDRKLAIIDGRIVGLGDDVKSARVLEITPNSVLLRDPMGRIRMLTISSTR*
Ga0066697_1078412813300005540SoilVEQPLAFDAALGTILYSPDRKLAIVDGRIVGVGDEVRGARIVDITPTAVMLRDAQGRLRRLALGPSLR*
Ga0070695_10051861323300005545Corn, Switchgrass And Miscanthus RhizosphereIIDGRIIGVGDEVRGARVTDITTNAVFLRDAQGKLRRLTLAGSR*
Ga0066695_1018304223300005553SoilVALPFDALLATILYSPDRKLAIIDGRIVGVGDEVRGARVTDITPNAVFLRDRQGKLRRLDR*
Ga0066700_1038471223300005559SoilLGTILYSADQKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGQGRLRRLGLSTAGK*
Ga0066670_1000038273300005560SoilLGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK*
Ga0066705_1025537823300005569SoilVLGTILYSPDRKLAIVNGRIVGPGDEVNGASIVEITPTTVLLRDAQGRLRSLTLGAGARAPAAAR*
Ga0068852_10078993323300005616Corn RhizosphereRKLAIIDNRIVGVGDEVRGARITEITAGAVFLRDTQGRLRRLALGASGR*
Ga0068859_10310714223300005617Switchgrass RhizosphereRKLAIIDNRIVGVGDEVRGARVIEITAGAVLLRDAQGKLRRLTLGAGGR*
Ga0075040_168248413300005646Permafrost SoilDNRIVGIGDEVRGARVIDITPSAVMLRDEKGRLRRLALATGGR*
Ga0075273_1011773913300005902Rice Paddy SoilATPFEADLGTILYSTDRKLAIVDGLIVGIGDTVRGARIIDITPTTVLLRDAQGRLRRLALGAGGR*
Ga0066795_1017424213300005938SoilTILYAPNRQLAIIDGRIVQSGDDVKGARVVDITPTRVLLRDADGQPRQLLLSEAVGK*
Ga0066656_1113950413300006034SoilVLGTILYSPDRKFAIVNGRIVGPGDEVNGARIVDITPTTVLLRDAQGRLRSLSLGGVGR
Ga0070715_1035588523300006163Corn, Switchgrass And Miscanthus RhizosphereILYSPDRKLAIVDGRIVGVGDEVRGAQIVDITPTAVMLRDARGRLRRLALGASGR*
Ga0075522_1011752423300006638Arctic Peat SoilGTILFGPDRALAIVDGRIVGIGDEVRGARVLEITANAVMLRDAQGKLRRLSLSTSR*
Ga0079222_1219496123300006755Agricultural SoilDRKLAIVDGRIVGVGDEIRGARIVDITPTAVMLRDGQGRLRRLALGASGG*
Ga0068865_10057715213300006881Miscanthus RhizospherePEVAQPFDAVLGSILYSPDRKLAIVDGRIVGVGDDIRGAKIVEITAGAVMLRDAQGRLRQLTLSNAGR*
Ga0075424_10186898523300006904Populus RhizosphereILYSPDRKLAIVDGRIVGVGDEIRGARIVDITPTAVMLRDAQGRLRRLALGASGR*
Ga0075424_10284147713300006904Populus RhizosphereHRLAIVDGRIVAVRDDVRGAENPGHHASAALLRDGQGQLRQLGLSTAGK*
Ga0075435_10064246813300007076Populus RhizospherePDRKLAIIDGRIVGVGDEVHGARVTEITPNAVLLRDAQGRLRRLALAGSR*
Ga0066710_10019845633300009012Grasslands SoilLLATILYSPDRKLAIIDGRIVGVGDEVRGARVTDITPNAVFLRDRQGKLRRLDR
Ga0066710_10135382613300009012Grasslands SoilAIIDGQIVGPGNIVRGARVINITPNEVMLRDSQGRLRRLALAGGR
Ga0066710_10155832433300009012Grasslands SoilLGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK
Ga0066793_1023409113300009029Prmafrost SoilILYSPDRKLAIVDGRIVGPGDEVRGARVIDITSTAVMLRDAQGRLRRLALGAGGR*
Ga0105244_1058301213300009036Miscanthus RhizosphereVLGTILYSPDRKLAIVNDRIVGPGDEVNGATIVDITPTTVLLRDAQGRLRSLALGAGARTPPAP*
Ga0099828_1174375523300009089Vadose Zone SoilSPDRKLAIVDGRIVGPGDEVRGARIVDISPGAVILRDAQGRLRRLAVSAGSR*
Ga0066709_10110562123300009137Grasslands SoilLYSPDRKLAIIDGRIVGVGDEVRGARITDITASTVFLRDRQGKLRRLGQ*
Ga0066709_10396287923300009137Grasslands SoilVALPFDALLATILYSPDRKLAIIDGRIVGVGDEVRGSRVTDITPNAVFLRDRQGKLRRLDR*
Ga0099792_1011200023300009143Vadose Zone SoilPFVAVLGTILYSPDRKLAIVNDRIVGPGDEVNGATIVDITPRTVLLRDAQGRLRSLTLGVGARTPAAP*
Ga0114129_1277685813300009147Populus RhizosphereMENALPFEASLGTILYSSDRKLAIIDGRIVGVGDEVRGARVTDITLNAVFLRDGQGRLRRLSR*
Ga0111538_1336200713300009156Populus RhizosphereVPFDAVLGTILYSPDRKLAIVNGRIVGPGDEVNGARIVDITPTTVLLRDAQGRLRSLTVGALGRSA
Ga0105242_1274901613300009176Miscanthus RhizosphereLYSPDRRLAIIDGHIVGPGDEIRGAQIVDITPGTVMLRDGQGR
Ga0105856_114690123300009662Permafrost SoilYSADRRLAIIDGKIVVIGDLVRDARVIDITPGAVLLRDGQGRLRRLALSAGGR*
Ga0134088_1018653213300010304Grasslands SoilELGTILYSADRKLAIVDGRIVAVGDEVRGARIVDITPSAVLLRDGQGRLRRLGLSTAGK*
Ga0134063_1001848853300010335Grasslands SoilMDTPFQAELGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK*
Ga0134062_1081179823300010337Grasslands SoilVTPPVPFDATLGMILYSPDRKLAIVNGRIVGPGDEVSGARIVDITPTMVLLRDAQGRLRNLTLGGPTPPAP*
Ga0126378_1058111113300010361Tropical Forest SoilRQLAIVDGRIVGVGDIVRGARIVEISPNAVMLRDAQGRLHRLELGAGAK*
Ga0126377_1189617523300010362Tropical Forest SoilLPFDASLGTILYSPDRKLAIIDGRIVGVGDEVRGARVTEIVPNAVLLRDGQGRLLRLALASAR*
Ga0134124_1097796923300010397Terrestrial SoilRKLAIVDNQIVSVGDDVRGARIVEITPGAVMLRDAQGRLRQLTLSHGGR*
Ga0134124_1149749713300010397Terrestrial SoilPPVPFPAVLGTIFYSPDRKFAIINDRIVGPGDEVNVARVVDITPTTVILRDEKGRLRSLTLGADASRQRPSGR*
Ga0134127_1084168823300010399Terrestrial SoilLPFAAVLGTILYSPDRKLAIVNDRIVGPGDEVNGARIVDITPTSVLLRDAQGRLRVLTLGARTPPAP*
Ga0134122_1292430423300010400Terrestrial SoilPEVPLPFDAVLGTILHSPDRKLAIVNGRIVGIGDEVNGSPIVDITPTVVLLRDAQGRLRSLAVGARDATRP*
Ga0150983_1348380113300011120Forest SoilDALPFDAVLGTILYSPDRRLAIIDGHIVGLGDDVRGARIVDITPAAVSLRDAQGKLRQLTLGAGAR*
Ga0137392_1019587013300011269Vadose Zone SoilDRKLAIIDGRIVGPGDDVRGARVIDITPSAVLLRDAQGRLRRLALTAGGR*
Ga0150985_11538800633300012212Avena Fatua RhizosphereFDAALGTILYSPDRKLAIIDNRIVGVGDEIRGARVTEITANAVLLRDAQGKLRRLTLGAGGR*
Ga0137361_1078480633300012362Vadose Zone SoilLYSPDRKLAIVNDRIVGPGDEVNGARIVDITPTTVLLRDAQGRLRSL
Ga0137390_1064802823300012363Vadose Zone SoilVLGTILYSPDRKLAIIDGRIVGPGDDVRGARVIGITPSAVLLRDAQGRLRRLALTSGGR*
Ga0150984_10077516323300012469Avena Fatua RhizosphereCALPISILYSPDRKLAIIDGRIVGVGDEVRGARVTEIMPNAVLLRDAKGRLRRLALTGDR
Ga0150984_11295656513300012469Avena Fatua RhizosphereSPDRKLAIVDGRIVGVGDHVRDARVVDITASAVLLRDAQGRLRQLSMSSGVR*
Ga0137397_1077518623300012685Vadose Zone SoilLLATILYSPDRKLAIIDGRIVGVGDEVRGARITEITASTVFLRDRQGKLRRLGQ*
Ga0157298_1036464713300012913SoilATLGTILYSAERKLAIVNGRIVGIGDDVNGARIVDITATTVLLRDARNRMRILTLGQGSVPSAQ*
Ga0137394_1021899523300012922Vadose Zone SoilLAIIDGRIIGVGDEVRGARVTDITANAVFLRDAQGKLRRLTLAGSR*
Ga0137413_1123847923300012924Vadose Zone SoilRKLAIIDNRIVGVGDEVRGARVTEITAGAVLLRDAQGKLRRLTLGAGSR*
Ga0153915_1114003123300012931Freshwater WetlandsDAVLGTILYGPDRRLAVIDGRIVQAGDDVRGAEVVDIRPNIVLLRDAQGRLRRLALDFEPGGAAR*
Ga0153915_1295320823300012931Freshwater WetlandsLYAPDRKLAIVDGRIVQVGDDVRGAQIVDITPAAVLLRDAQGRLRRLALD
Ga0137410_1120343113300012944Vadose Zone SoilLYSPDRKLAIIDGRIVGVGDEVRGARITEITASTVFLRDRQGK
Ga0153916_1019077623300012964Freshwater WetlandsVPLPFDAALGTILYGADRKLAIIDGRIVQVGDEVRGARVMEITPNSVLFRDPEGRLRRLSLQGPGR*
Ga0134087_1006243713300012977Grasslands SoilVSTPPRASPQPILPKRPETDTPFQAELGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK*
Ga0163163_1234932313300014325Switchgrass RhizospherePERRLAIVDGRIVQVGDEIRGARIVDITPGAVFLRDNGGELRTLSLGTGR*
Ga0137418_1040223613300015241Vadose Zone SoilKLAIVNDRIVGPGDQVNGATIVDITPTTVLLRDAQGRLRSLTLGVGARTLAAP*
Ga0132258_1318473223300015371Arabidopsis RhizosphereIDGRIVGVGDEVRGARVTDIMPNAVLLRDAQGRLRRLALAGGR*
Ga0187779_1136824913300017959Tropical PeatlandKSARPAVPEPAPTPFDATLGTILYSTDRKLAVIDGRIVGVGDVVKGARITDISPTVVLLRDANGRPRSLALGNPGR
Ga0184620_1004838913300018051Groundwater SedimentPFDAVLGTILYSPDRKLAIVDGDIVATGDEVRGVRVIEITPNAVMLRDGQGRLWRLGLGVGVR
Ga0184618_1040338713300018071Groundwater SedimentPEEPAPFDARLGTILYAPDRTLAIVDGRIVQPGDEVKGARVVAITSTQVLLRDAGGRPRQLTTTATDAR
Ga0184612_1045768513300018078Groundwater SedimentVLGTILYSPERKLAIVNGRIVGPGDEVNGARIVDITPTTVLLRDAQGRLRSLTLGGRTPSAP
Ga0187774_1132379023300018089Tropical PeatlandLPFDASLETILYSADRKLAIVDGRIVGVGDVVKGARIVEISPNAVMLRDAQGRLRRLALGAAAK
Ga0066667_1075893023300018433Grasslands SoilVSTPPRASPQPILPKRPETDTPFQAELGTILYSADRKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGHGRLRRLGLSTAGK
Ga0066662_1178323013300018468Grasslands SoilKFAIVNGRIVGPGDEVNGARIVDITPTTVLLRDAQGRLRSLTVGAVGRTPASP
Ga0190274_1130773713300018476SoilKLAIIDNRIVGVGDEVRGARVTEITAGAVFLRDAQGKLRRLTLGAGGR
Ga0066669_1033187133300018482Grasslands SoilVLGTILYSPDRKLAIVNGRIVGPGDEVNGASIVEITPTTVLLRDAQGRLRSLTLGAGARAPAAAR
Ga0209640_1125488213300025324SoilVPFDAVLGTILYSPDRKLAIINGRIVGTGDVVNGARIVDITPATVLLRDAQGRLRILTLGSAGRSETAP
Ga0209342_1028060213300025326SoilTLGTILYSPERRLAIIDGRIVTIGDEVSGARVVDITPGMVLLRDGRGALRSLTLATLDRR
Ga0209751_1042890423300025327SoilYSPDRKFAIVNGRIVGPGDEVNGARIVDITPNAVLLRDAQGRLRSLTLGGSGRN
Ga0208587_103325423300025484Arctic Peat SoilGTILYAPNRQLAIIDGRIVQSGDEVKGARVVDITPTRVLLRDAGGQTRQLLLSAAPGK
Ga0207642_1012569713300025899Miscanthus RhizosphereEVPQPFDAVLGTILFSPDRKLAIVDNQIVSVGDDVRGARIVEITPGAVMLRDAQGRLRQLTLSHGGR
Ga0207670_1122587423300025936Switchgrass RhizosphereTLEFDATLETILYSPERRLAIVDGRIVQVGDEIRGVRIVDITPGAVFLRDANGDMRTLSLAAGR
Ga0207669_1187712013300025937Miscanthus RhizospherePIPFDATLGTILYSAERKLAIVNGRIVGIGDDVNGARIVDITATTVLLRDARNRMRILTLGQGSAPSAQ
Ga0208527_104648613300025990Rice Paddy SoilATPFEADLGTILYSTDRKLAIVDGLIVGIGDTVRGARIIDITPTTVLLRDAQGRLRRLALGAGGR
Ga0209862_104574213300026222Permafrost SoilKLAIIDNRIVGIGDEVRGARVIDITPSAVMLRDDKGRLRRLALATGGR
Ga0209901_101711323300026275Permafrost SoilGTILFSPDRKLAIIDNRIVGIGDEVRGARVIDITPSAVMLRDEKGRLRRLALATGGR
Ga0209471_100998533300026318SoilLGTILYSADRKLAIVDGRIVTIGDDVRGTRIVDITPSAVLLRDGQGRLRRLGLSIAGK
Ga0209647_124499423300026319Grasslands SoilPMSFDAALGTILYSPDRKLAIVDGRIVGVGDEVRGARIVDITPTAVMLRDGQGRLRRLALGAPDR
Ga0209801_101794843300026326SoilTILYSADQKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGQGRLRRLGLSTAGK
Ga0209059_104733433300026527SoilLGTILYSADRKLAIVDGRIVTIGDDVRGTRIVDITPSAVLLRDGQGRLRRLGLSTAGK
Ga0209807_126832223300026530SoilIVNGRIVGPGDEVNGASIVEITPTTVLLRDAQGRLRSLTLGAGARAPAAAR
Ga0209689_119056613300027748SoilSTPPRASPQPILPKRPETDTPFEAELGTILYSADQKLAIVDGRIVTVGDDVRGARIVDITPSAVLLRDGQGRLRRLGLSTAGK
Ga0209074_1035369613300027787Agricultural SoilDRKLAIVDGRIVGVGDEIRGARIVDITPTAVMLRDGQGRLRRLALGASGG
Ga0209726_1008494913300027815GroundwaterGSILYSPDRKLAIIDGRIVGPGDEVKGARVVDITPGGVTLRDSQGRLRTLVLGAPGQ
Ga0209283_1056617213300027875Vadose Zone SoilRKLAIVDGRIVGPGDEVRGARIVDISPGAVILRDAQGRLRRLAVSAGSR
Ga0209488_1095537813300027903Vadose Zone SoilDAVLGTILYSTDRKLAIIDNRIVGVGDEVRGARVIEITAAAVLLRDAHGQLRGLTLGAGE
Ga0307282_1024638023300028784SoilVVPFDGLLGTILYSPDRKLAIIDGRIVGPGDEIQGARIVDITPGTVILRDGLGHLKQLTMASRER
Ga0307503_1017630913300028802SoilIIDGRIVQVGDQVNGARVVDITSTDVFLRDGQGRLRQLPLGLPGR
Ga0247825_1000675273300028812SoilTAAPFEAVLGTILYSPDRKLAIVNNRIVGLGDTVNGARIVDITPGTVLLRDPQGRLRSLTLGAVGGLGTAP
Ga0247825_1003155413300028812SoilVPFDAVLGTILYSSDRKLAIVNGRIVGLGDVVNGARIVDISAGTVLLRDAQGRLRSLTLGPVGSTIAQ
Ga0307296_1038075223300028819SoilPFVAVLGTILYSPDRKLAIVNDRIVGPGDEVNGATIVDITPTTVVLRDGQGRLRTLTLGVGVRMPTAP
Ga0307277_1005356213300028881SoilAPAPEAAPPFDAELGTILYSPDRKLAIVDGGIVATGDKVRGARIVEITPNAVMLRDGQGRLWRLGLGVGVR
Ga0307497_1049285823300031226SoilTLGTILYGADRKLAIVDGRIVQVGDDVRGAKVVEITPNSVLFRDRQGQLRRLGLEDSRR
Ga0170824_11752401723300031231Forest SoilVTASPEVSQPFDAVLGTILYSPDRKLAIVDGRIVGVGDDIRGAKIVEITAGAVMLRDAQGRLRQLMLSTAGR
Ga0307506_1046605023300031366SoilPEIPLPFDAALGTILYGPERQLAIVDGRIVQVGDVVSGARVVDITSTLVLLRDRQGRLRQLGLGPPGR
Ga0310886_1065837313300031562SoilILYSAERKLAIVNGRIVGIGDDVNGARIVDITATSVLLRDARNRMRILTLGQGQPAPSAQ
Ga0307468_10049673223300031740Hardwood Forest SoilVLPFDASLGTILYSADRKFAIVDGRIIGVGDEVRGARVTDITPAAVFLRDAQGKLRRLTLAGSR
Ga0315290_1140461423300031834SedimentVPTPFDAVLRTILYSPERRLAIIDGRIVQMGDEIKGARVIDIAATTVLLRDAKGRLRSLTLAASSP
Ga0315286_1165177313300032342SedimentLAIVDGRIVSAGDQVRRARVVDITAGVVLLRDAQGRLRRLSLGASS
Ga0314868_017654_488_6823300033758PeatlandMPFDANLDTILYSADRRLAVIDGRIVGVGDAVKGARITAITASQVLLRDQQGRLRSLTLGAGGQ
Ga0370493_0103338_721_9123300034129Untreated Peat SoilVPFDAVLGTILYSADRKLAIIDGHIVGIGEDVKGARVTDITPTVVTLRDAQGRLHTLTLASPRP
Ga0370493_0202847_161_3733300034129Untreated Peat SoilVPPPIPLDAVLGTILYGPDRKLAIVDGRIVGIGDEVKGARVTDITPTSVLLRDADGRPRIISAGSARRQP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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