Metagenome / Metatranscriptome Family F069292

Basic Information
Family ID	F069292
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	81 residues
Representative Sequence	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Number of Associated Samples	108
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.32 %
% of genes near scaffold ends (potentially truncated)	41.13 %
% of genes from short scaffolds (< 2000 bps)	87.90 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (53.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.290 % of family members)
Environment Ontology (ENVO)	Unclassified (25.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.484 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 7.59% Coil/Unstructured: 92.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07690	MFS_1	4.03
PF01864	CarS-like	2.42
PF00497	SBP_bac_3	1.61
PF04333	MlaA	1.61
PF03625	DUF302	1.61
PF01223	Endonuclease_NS	0.81
PF13545	HTH_Crp_2	0.81
PF13191	AAA_16	0.81
PF13676	TIR_2	0.81
PF09694	Gcw_chp	0.81
PF13452	MaoC_dehydrat_N	0.81
PF00856	SET	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0575	CDP-diglyceride synthetase	Lipid transport and metabolism [I]	2.42
COG2853	Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.61
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	1.61
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.23 %
Unclassified	root	N/A	46.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.23 %
Unclassified	root	N/A	46.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.23 %
Unclassified	root	N/A	46.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	20.97 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.42 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.81 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.97 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2.42 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.81 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT01C8HV2	Not Available	605	Open in IMG/M
2228664021\|ICCgaii200_c0811495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	963	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2412546	Not Available	901	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2414067	Not Available	1026	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c008925	Not Available	836	Open in IMG/M
3300000787\|JGI11643J11755_11655163	Not Available	1268	Open in IMG/M
3300000956\|JGI10216J12902_102495655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	960	Open in IMG/M
3300004006\|Ga0055453_10282726	Not Available	532	Open in IMG/M
3300004013\|Ga0055465_10152548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	733	Open in IMG/M
3300004157\|Ga0062590_101454682	Not Available	685	Open in IMG/M
3300004463\|Ga0063356_101089017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1150	Open in IMG/M
3300004480\|Ga0062592_100254992	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300004481\|Ga0069718_16238998	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005162\|Ga0066814_10086103	Not Available	571	Open in IMG/M
3300005162\|Ga0066814_10089888	Not Available	562	Open in IMG/M
3300005328\|Ga0070676_10030495	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300005332\|Ga0066388_100383685	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300005332\|Ga0066388_100751066	Not Available	1575	Open in IMG/M
3300005332\|Ga0066388_102955655	Not Available	869	Open in IMG/M
3300005343\|Ga0070687_100633528	Not Available	739	Open in IMG/M
3300005366\|Ga0070659_100467755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1071	Open in IMG/M
3300005366\|Ga0070659_100472928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300005440\|Ga0070705_101164667	Not Available	634	Open in IMG/M
3300005530\|Ga0070679_100307651	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300005536\|Ga0070697_100491642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1072	Open in IMG/M
3300005563\|Ga0068855_101900758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	603	Open in IMG/M
3300005617\|Ga0068859_102190686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	610	Open in IMG/M
3300005719\|Ga0068861_101518598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300005840\|Ga0068870_10128466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1469	Open in IMG/M
3300005844\|Ga0068862_101810688	Not Available	620	Open in IMG/M
3300006172\|Ga0075018_10331772	Not Available	758	Open in IMG/M
3300006846\|Ga0075430_100417042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1108	Open in IMG/M
3300006847\|Ga0075431_100604957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1080	Open in IMG/M
3300006854\|Ga0075425_101267843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300006871\|Ga0075434_102401101	Not Available	529	Open in IMG/M
3300009081\|Ga0105098_10212146	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300009091\|Ga0102851_13236242	Not Available	523	Open in IMG/M
3300009094\|Ga0111539_10460148	Not Available	1481	Open in IMG/M
3300009098\|Ga0105245_10260947	Not Available	1686	Open in IMG/M
3300009098\|Ga0105245_10364440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300009146\|Ga0105091_10226141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	897	Open in IMG/M
3300009153\|Ga0105094_10534479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	683	Open in IMG/M
3300009156\|Ga0111538_12792916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	612	Open in IMG/M
3300009162\|Ga0075423_12353341	Not Available	580	Open in IMG/M
3300009177\|Ga0105248_12520232	Not Available	586	Open in IMG/M
3300009177\|Ga0105248_13115660	Not Available	528	Open in IMG/M
3300009804\|Ga0105063_1037313	Not Available	651	Open in IMG/M
3300009818\|Ga0105072_1118600	Not Available	541	Open in IMG/M
3300010043\|Ga0126380_10138587	Not Available	1536	Open in IMG/M
3300010371\|Ga0134125_10501534	Not Available	1344	Open in IMG/M
3300010373\|Ga0134128_11349955	Not Available	786	Open in IMG/M
3300010373\|Ga0134128_13127223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	509	Open in IMG/M
3300010398\|Ga0126383_10020995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5004	Open in IMG/M
3300010400\|Ga0134122_11248382	Not Available	747	Open in IMG/M
3300010401\|Ga0134121_12964368	Not Available	522	Open in IMG/M
3300011119\|Ga0105246_10979730	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300012511\|Ga0157332_1023603	Not Available	735	Open in IMG/M
3300012513\|Ga0157326_1032035	Not Available	701	Open in IMG/M
3300012903\|Ga0157289_10318733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300012948\|Ga0126375_10050917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2205	Open in IMG/M
3300012951\|Ga0164300_10008375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3136	Open in IMG/M
3300012951\|Ga0164300_10906247	Not Available	558	Open in IMG/M
3300012961\|Ga0164302_10553267	Not Available	824	Open in IMG/M
3300012961\|Ga0164302_11051545	Not Available	639	Open in IMG/M
3300012985\|Ga0164308_10007339	All Organisms → cellular organisms → Bacteria	5837	Open in IMG/M
3300012986\|Ga0164304_10001991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7239	Open in IMG/M
3300012988\|Ga0164306_10016480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3968	Open in IMG/M
3300014271\|Ga0075326_1088055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	864	Open in IMG/M
3300015371\|Ga0132258_10400454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3410	Open in IMG/M
3300015372\|Ga0132256_103042053	Not Available	564	Open in IMG/M
3300017792\|Ga0163161_10644676	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300017822\|Ga0187802_10033835	Not Available	1825	Open in IMG/M
3300017823\|Ga0187818_10115141	Not Available	1164	Open in IMG/M
3300017924\|Ga0187820_1008767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2406	Open in IMG/M
3300017928\|Ga0187806_1055795	Not Available	1207	Open in IMG/M
3300017932\|Ga0187814_10079587	Not Available	1204	Open in IMG/M
3300017932\|Ga0187814_10232396	Not Available	697	Open in IMG/M
3300017942\|Ga0187808_10025538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2418	Open in IMG/M
3300017943\|Ga0187819_10456854	Not Available	731	Open in IMG/M
3300017947\|Ga0187785_10264308	Not Available	777	Open in IMG/M
3300017955\|Ga0187817_10059215	All Organisms → cellular organisms → Bacteria → Proteobacteria	2369	Open in IMG/M
3300017966\|Ga0187776_10872213	Not Available	651	Open in IMG/M
3300017974\|Ga0187777_10299612	Not Available	1099	Open in IMG/M
3300017994\|Ga0187822_10209735	Not Available	653	Open in IMG/M
3300017995\|Ga0187816_10067862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1509	Open in IMG/M
3300018007\|Ga0187805_10011565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3731	Open in IMG/M
3300018028\|Ga0184608_10159767	Not Available	975	Open in IMG/M
3300018075\|Ga0184632_10300495	Not Available	695	Open in IMG/M
3300018076\|Ga0184609_10041236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1940	Open in IMG/M
3300018078\|Ga0184612_10123527	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300018081\|Ga0184625_10393156	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300018469\|Ga0190270_10220104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1623	Open in IMG/M
3300018469\|Ga0190270_12134344	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018476\|Ga0190274_12821851	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300018481\|Ga0190271_11268689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	858	Open in IMG/M
3300021078\|Ga0210381_10212151	Not Available	678	Open in IMG/M
3300022467\|Ga0224712_10350338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	698	Open in IMG/M
3300022915\|Ga0247790_10224707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	505	Open in IMG/M
3300025313\|Ga0209431_10477159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	953	Open in IMG/M
3300025932\|Ga0207690_10202109	Not Available	1510	Open in IMG/M
3300025935\|Ga0207709_10496916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	951	Open in IMG/M
3300025936\|Ga0207670_11672121	Not Available	541	Open in IMG/M
3300025938\|Ga0207704_10467295	Not Available	1010	Open in IMG/M
3300026118\|Ga0207675_101475027	Not Available	701	Open in IMG/M
3300027680\|Ga0207826_1122025	Not Available	714	Open in IMG/M
3300027909\|Ga0209382_10341614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1679	Open in IMG/M
3300028379\|Ga0268266_10186494	Not Available	1892	Open in IMG/M
3300028380\|Ga0268265_11413793	Not Available	698	Open in IMG/M
3300028587\|Ga0247828_10066500	Not Available	1613	Open in IMG/M
3300028592\|Ga0247822_10936961	Not Available	712	Open in IMG/M
3300028608\|Ga0247819_10553148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	687	Open in IMG/M
3300028889\|Ga0247827_11315078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	506	Open in IMG/M
3300031455\|Ga0307505_10231486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	857	Open in IMG/M
3300031547\|Ga0310887_10192425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1103	Open in IMG/M
3300031547\|Ga0310887_10568150	Not Available	691	Open in IMG/M
3300031547\|Ga0310887_10724846	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031720\|Ga0307469_10184872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1608	Open in IMG/M
3300032075\|Ga0310890_10491291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	931	Open in IMG/M
3300032122\|Ga0310895_10115284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1116	Open in IMG/M
3300032122\|Ga0310895_10246748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	823	Open in IMG/M
3300032205\|Ga0307472_101403948	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300033550\|Ga0247829_11451256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	567	Open in IMG/M
3300033551\|Ga0247830_10047522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2795	Open in IMG/M
3300033551\|Ga0247830_10104160	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	26.61%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.61%
Plants	Host-Associated → Plants	26.61%
Aquatic	Environmental → Aquatic	20.97%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.94%
Freshwater	Environmental → Aquatic → Freshwater	14.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.68%
Sediment	Environmental → Aquatic → Sediment	4.84%
Marine	Environmental → Aquatic → Marine	1.61%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.87%
Loam	Environmental → Terrestrial → Soil → Loam	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.23%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_03089230	2170459020	Switchgrass, Maize And Mischanthus Litter	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQASSE
ICCgaii200_08114952	2228664021	Soil	MEGVGAMQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA
ICChiseqgaiiDRAFT_24125462	3300000033	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECXRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQASSE*
ICChiseqgaiiDRAFT_24140672	3300000033	Soil	MEPLIAGPLNAQCGKCLXWEQXETVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
ARSoilOldRDRAFT_0089251	3300000044	Arabidopsis Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQK
JGI11643J11755_116551632	3300000787	Soil	MEPLIAGPLNAQCGKCLYWEQNXTVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDXXYRTPQASSE*
JGI10216J12902_1024956552	3300000956	Soil	RDLYRSSLVTAPWEMEGVGAMQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0055453_102827261	3300004006	Natural And Restored Wetlands	MEPLIAGPLNAQCGKCLYWEQNENVVTMGECRRYPPQVVMVRDGEDAQNTASSEWPLTLSAAWCGEWIDQKYRTPQVGSD*
Ga0055465_101525482	3300004013	Natural And Restored Wetlands	MQPNIAGPLNAQCGKCLYWEQHDGVATMGECKRYPPQVVMVRDAEDAPPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0062590_1014546822	3300004157	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQASSE*
Ga0063356_1010890172	3300004463	Arabidopsis Thaliana Rhizosphere	MQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0062592_1002549921	3300004480	Soil	PLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0069718_162389982	3300004481	Sediment	MEGEGAMQPTIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0066814_100861031	3300005162	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLNAAWCGEWIDQKYRTPQASSD*
Ga0066814_100898881	3300005162	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0070676_100304952	3300005328	Miscanthus Rhizosphere	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0066388_1003836855	3300005332	Tropical Forest Soil	MEPFIAGPHNAQCGKCLYWEQHENVAAMGECRRYPPQVVMVREGGEEGQHTASSEWPLTLSAAWCGEWIDQKYRNVQAAEAGK*
Ga0066388_1007510662	3300005332	Tropical Forest Soil	MQPMIAGPLNARCGKCLYWEQHEAAAAMGECRRYPPQVVMVGEAGDAQPTASSEWPLTLSAAWCGEWIDQKYRSPQPSSEA*
Ga0066388_1029556551	3300005332	Tropical Forest Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGEDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQAAGD*
Ga0070687_1006335281	3300005343	Switchgrass Rhizosphere	CGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0070659_1004677553	3300005366	Corn Rhizosphere	IAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0070659_1004729281	3300005366	Corn Rhizosphere	QPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0070705_1011646671	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0070679_1003076512	3300005530	Corn Rhizosphere	MQPTIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0070697_1004916423	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQPNIAGPLNAQCGKCLYWEQHEAAAAMGECKRYPPQVVMVRDAGDAQLTASSEWPLTLSAAWCGEWIDQKYRAP
Ga0068855_1019007582	3300005563	Corn Rhizosphere	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQ
Ga0068859_1021906862	3300005617	Switchgrass Rhizosphere	CGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0068861_1015185982	3300005719	Switchgrass Rhizosphere	MEPFIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLSAAWCGEWIDQKYRVPQASSD*
Ga0068870_101284663	3300005840	Miscanthus Rhizosphere	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVHDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0068862_1018106882	3300005844	Switchgrass Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLSAAWCGEWIDQKYRTPQAGSD*
Ga0075018_103317722	3300006172	Watersheds	MQPNIAGPLNAQCGKCLYWEQHEAAAAMGECRRYPPQVVMVREAGDAQFTASSEWPLTLSAAWCGEWIDQKYRSPQAATEA*
Ga0075430_1004170421	3300006846	Populus Rhizosphere	RSSLVTAPWEMEGVGAMQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0075431_1006049573	3300006847	Populus Rhizosphere	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0075425_1012678432	3300006854	Populus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRSPQTAGD*
Ga0075434_1024011012	3300006871	Populus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNETVATMGECRRYPPQVVMVRDGDDAQSTASSEWPLTLAAAWCGEWIDQKYRSPQTA
Ga0105098_102121462	3300009081	Freshwater Sediment	LNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLIAAWCGEWIDEKYRTPQASA*
Ga0102851_132362422	3300009091	Freshwater Wetlands	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQNTASSEWPLTLSAAWCGEWIDQKYRTPQAGGD*
Ga0111539_104601483	3300009094	Populus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLSAAWCGEWIDQKYRTPQAGGD*
Ga0105245_102609472	3300009098	Miscanthus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREADDAQNTASSEWPLTLSAAWCGEWIDQKYRTPQAGGD*
Ga0105245_103644403	3300009098	Miscanthus Rhizosphere	MEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0105091_102261411	3300009146	Freshwater Sediment	LNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0105094_105344791	3300009153	Freshwater Sediment	MQGEGAMQPNIAGPLNAQCGKCLYWEQHEGVATMGECKRYPPQVVMVRDAEDALPTASSEWPLTLSAAWCGEWIDQKYRTPQASD*
Ga0111538_127929162	3300009156	Populus Rhizosphere	MQPTIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA*
Ga0075423_123533412	3300009162	Populus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVTTMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0105248_125202322	3300009177	Switchgrass Rhizosphere	CASPKGEAAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQSGGD*
Ga0105248_131156602	3300009177	Switchgrass Rhizosphere	MEGEGAMQPNIAGPLNAQCEKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0105063_10373132	3300009804	Groundwater Sand	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDGQNTASSEWPLTLAAAWCGEWIDQKYRTPQTGGE*
Ga0105072_11186002	3300009818	Groundwater Sand	PEPRETPAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDGQNTASSEWPLTLSAAWCGEWIDQKYRTPQTGGE*
Ga0126380_101385873	3300010043	Tropical Forest Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREGEDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQAAGD*
Ga0134125_105015342	3300010371	Terrestrial Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDTQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0134128_113499552	3300010373	Terrestrial Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQSGGD*
Ga0134128_131272232	3300010373	Terrestrial Soil	MEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTLQASA*
Ga0126383_1002099510	3300010398	Tropical Forest Soil	MQPMIAGPLNARCGKCLYWEQHEAAAAMGECRRYPPQVVMVGEAGDAQPTASSEWPLTLSAAWCGEWIDQKYRSPQPSPEA*
Ga0134122_112483822	3300010400	Terrestrial Soil	MEPLVAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQ
Ga0134121_129643682	3300010401	Terrestrial Soil	LTLCASPKGEAAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0105246_109797302	3300011119	Miscanthus Rhizosphere	MEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVPDAEDAQATASSEWPLTLSAAWCGEWIDEKY
Ga0157332_10236032	3300012511	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASLEWPLTLAAAWCGEWIDQKYRTPQAG
Ga0157326_10320352	3300012513	Arabidopsis Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQ
Ga0157289_103187331	3300012903	Soil	EGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVPDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRAPQASA*
Ga0126375_100509174	3300012948	Tropical Forest Soil	LCASPKGEAAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGEDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQAAGD*
Ga0164300_100083756	3300012951	Soil	MQPNIAGPLNAQCGKCLYWEQHEAAAAMGECKRYPPQVVMVRDAGDAQLTASSEWPLTLSAAWCGEWIDQKYRAPQASTEA*
Ga0164300_109062472	3300012951	Soil	MYWEQHEAAAAMGECKRYPPQVVMVRDAGDAQLTASSEWPLTLSAAWCGEWIDQKYRAPHASPEA*
Ga0164302_105532671	3300012961	Soil	MQPNIAGPLNAQCGKCLYWEQHDNVAAMGECKRYPPQVVMVRDSDDAQLTASSESPLTLSAAWIDQKYRTPQANGA*
Ga0164302_110515452	3300012961	Soil	TLCASPKGEAAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0164308_100073391	3300012985	Soil	PLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0164304_100019911	3300012986	Soil	MQPNIAGPLNAQCGKCLYWEQHDNVAAMGECKRYPPQVVMVRDSDDAQLTASSEWPLTLSAAWIDQKYRTPQANGA*
Ga0164306_100164801	3300012988	Soil	MQPNIAGPLNAQCGKCLYWEQHEAAAAMGECKRYPPQVVMVRDAGDAQLTASSEWPLTLSAAWCGEWIDQKYRAPHASPEA*
Ga0075326_10880551	3300014271	Natural And Restored Wetlands	GPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVTVRDAEDTQSTASSEWPLTLSAAWCGEWIDQKYRTPQASA*
Ga0132258_104004541	3300015371	Arabidopsis Rhizosphere	AGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQTGGE*
Ga0132256_1030420532	3300015372	Arabidopsis Rhizosphere	NAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD*
Ga0163161_106446762	3300017792	Switchgrass Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLSAAWCGEWIDQKYRAPQASSD
Ga0187802_100338351	3300017822	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRTSQANRPATLGTPDPSAS
Ga0187818_101151411	3300017823	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRTPQANRPATLGTPDPSAG
Ga0187820_10087674	3300017924	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDVEDASNLTACSEWPFTLSDAWCGEWIDQRYRTPQANRPATLGTPDPSAG
Ga0187806_10557951	3300017928	Freshwater Sediment	MLPNVPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQRYRTPQANRPATLGTPDPSAG
Ga0187814_100795872	3300017932	Freshwater Sediment	MLPNVPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGE
Ga0187814_102323962	3300017932	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGE
Ga0187808_100255384	3300017942	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRTPQANRPATLGTPDPIVG
Ga0187819_104568541	3300017943	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDVEDASNLTACSEWPFTLSDAWCGEWIDQRYRTPQANRPATLGTPDSIVGSIGGVLL
Ga0187785_102643082	3300017947	Tropical Peatland	MQPMIAGPLNARCGKCLYWEQHEAAAAMGECRRYPPQVVMVGEAGDAQPTASSEWPLTLSAAWCGEWIDQKYRSPEPSSEA
Ga0187817_100592155	3300017955	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDVSNLTACSEWPFTLSDAWCGEWIDQKYRAPQANRPATLGTPDPIAG
Ga0187776_108722132	3300017966	Tropical Peatland	MQPMIAGPLNARCGKCLYWEQHEAAAAMGECRRYPPQVVMVGEAGDAQPTASSEWPLTLSAAWCGEWIDQKYRSPQPSSE
Ga0187777_102996121	3300017974	Tropical Peatland	MLPNMTGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYGTPQANRPATLGTPDPSAS
Ga0187822_102097351	3300017994	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRTPQANRPATLGTPDSIVGSIGGVLL
Ga0187816_100678621	3300017995	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRKPQANRPATLGTPDSIVSSIGGVLL
Ga0187805_100115657	3300018007	Freshwater Sediment	MLPNMPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQRYRTPQANRPATLGTPDPSAG
Ga0184608_101597672	3300018028	Groundwater Sediment	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLNAAWCGEWIDKKYRTPQASSD
Ga0184632_103004952	3300018075	Groundwater Sediment	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGEDTQNTASSEWPLTLSAAWCGEWIDQKYRTPQSGSE
Ga0184609_100412362	3300018076	Groundwater Sediment	MEPNIAGPLNAQCGKCLYWEQHEKIEAMGECKRYPPQVVMARNDEDAQPTACSEWPLTLSAAWCGEWIDQKYRTGQPTRA
Ga0184612_101235271	3300018078	Groundwater Sediment	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLNAAWCGEWIDQKYRTPQ
Ga0184625_103931562	3300018081	Groundwater Sediment	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLNAAWCGEWID
Ga0190270_102201042	3300018469	Soil	MQPTIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0190270_121343442	3300018469	Soil	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRT
Ga0190274_128218512	3300018476	Soil	MQPNIAGPLNAQCGKCLYWEQHDGGVAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA
Ga0190271_112686892	3300018481	Soil	MQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0210381_102121511	3300021078	Groundwater Sediment	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD
Ga0224712_103503382	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0247790_102247072	3300022915	Soil	RGTMEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0209431_104771592	3300025313	Soil	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA
Ga0207690_102021091	3300025932	Corn Rhizosphere	AQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0207709_104969162	3300025935	Miscanthus Rhizosphere	PNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0207670_116721211	3300025936	Switchgrass Rhizosphere	LHSLRPKGEAAMEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD
Ga0207704_104672952	3300025938	Miscanthus Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGEDAQSTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD
Ga0207675_1014750272	3300026118	Switchgrass Rhizosphere	LLTSRPDWAAFIASLFAPAPKGEAAMEPFIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLSAAWCGEWIDQKYRVPQASSD
Ga0207826_11220251	3300027680	Tropical Forest Soil	MLPNVPGPLNAQCGKCLYWEQHQKITAMGECKRYPPQVVMARDAEDASNLTACSEWPFTLSDAWCGEWIDQKYRTPQTNRPATLGTPNPIAG
Ga0209382_103416143	3300027909	Populus Rhizosphere	MQPNIAGPLNAQCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA
Ga0268266_101864941	3300028379	Switchgrass Rhizosphere	AGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0268265_114137932	3300028380	Switchgrass Rhizosphere	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGSD
Ga0247828_100665001	3300028587	Soil	TGLRSLQRRGTMEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMIRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0247822_109369611	3300028592	Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLSAAWCGEWIDQKYRVPQASSD
Ga0247819_105531482	3300028608	Soil	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMIRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0247827_113150781	3300028889	Soil	EGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMIRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0307505_102314862	3300031455	Soil	TRYVAVGQWREEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDALSTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0310887_101924251	3300031547	Soil	PLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0310887_105681502	3300031547	Soil	VVAVSFGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVREAGDAQNTASSEWPLTLAAAWCGEWIDQKYRTPQAGGD
Ga0310887_107248462	3300031547	Soil	MQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWI
Ga0307469_101848721	3300031720	Hardwood Forest Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLNAAWCGEWIDQKYRTPQASSD
Ga0310890_104912911	3300032075	Soil	QCGKCLYWERHDGVATMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTPQASA
Ga0310895_101152841	3300032122	Soil	RRGTMEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0310895_102467482	3300032122	Soil	LQRRGTMEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0307472_1014039482	3300032205	Hardwood Forest Soil	MEPLIAGPLNAQCGKCLYWEQNENVATMGECRRYPPQVVMVRDGDDAQITASSEWPLTLSAAWCGEWIDQKYR
Ga0247829_114512562	3300033550	Soil	PNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDEKYRTLQASA
Ga0247830_100475223	3300033551	Soil	MEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMIRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA
Ga0247830_101041602	3300033551	Soil	MVLLQRRGTMEGEGAMQPNIAGPLNAQCGKCLYWEQHDGVAAMGECKRYPPQVVMVRDAEDAQPTASSEWPLTLSAAWCGEWIDQKYRTPQASA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069292

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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