NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069228

Metagenome Family F069228

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069228
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 49 residues
Representative Sequence VAIAYLQEFEIQDGDTSTTNYDAVVAALNLQSAPDGLLIHTAGFDH
Number of Associated Samples 104
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.56 %
% of genes near scaffold ends (potentially truncated) 97.58 %
% of genes from short scaffolds (< 2000 bps) 95.16 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.903 % of family members)
Environment Ontology (ENVO) Unclassified
(49.194 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.645 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.16%    β-sheet: 16.22%    Coil/Unstructured: 71.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF07883Cupin_2 4.03
PF00072Response_reg 3.23
PF03795YCII 3.23
PF03729DUF308 2.42
PF06736TMEM175 1.61
PF00589Phage_integrase 1.61
PF00361Proton_antipo_M 1.61
PF01244Peptidase_M19 1.61
PF00884Sulfatase 1.61
PF01047MarR 1.61
PF13527Acetyltransf_9 0.81
PF00196GerE 0.81
PF13519VWA_2 0.81
PF00122E1-E2_ATPase 0.81
PF06525SoxE 0.81
PF12680SnoaL_2 0.81
PF00282Pyridoxal_deC 0.81
PF00903Glyoxalase 0.81
PF00156Pribosyltran 0.81
PF00486Trans_reg_C 0.81
PF04655APH_6_hur 0.81
PF01558POR 0.81
PF01565FAD_binding_4 0.81
PF00565SNase 0.81
PF00877NLPC_P60 0.81
PF13400Tad 0.81
PF00296Bac_luciferase 0.81
PF00990GGDEF 0.81
PF12681Glyoxalase_2 0.81
PF01613Flavin_Reduct 0.81
PF02786CPSase_L_D2 0.81
PF00069Pkinase 0.81
PF13374TPR_10 0.81
PF13238AAA_18 0.81
PF01544CorA 0.81
PF01863YgjP-like 0.81
PF13407Peripla_BP_4 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.23
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 3.23
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 2.42
COG2355Zn-dependent dipeptidase, microsomal dipeptidase homologPosttranslational modification, protein turnover, chaperones [O] 1.61
COG3548Uncharacterized membrane proteinFunction unknown [S] 1.61
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.81
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 0.81
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.81
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 0.81
COG1014Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunitEnergy production and conversion [C] 0.81
COG1451UTP pyrophosphatase, metal-dependent hydrolase familyGeneral function prediction only [R] 0.81
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 0.81
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.81
COG2216K+ transport ATPase, ATPase subunit KdpBInorganic ion transport and metabolism [P] 0.81
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.81
COG3570Streptomycin 6-kinaseDefense mechanisms [V] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.19 %
UnclassifiedrootN/A25.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559005|cont_contig45249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria905Open in IMG/M
2170459023|GZGNO2B02F3G58All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1511Open in IMG/M
2199352025|deepsgr__Contig_87111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria533Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101179727Not Available585Open in IMG/M
3300000891|JGI10214J12806_10569898Not Available695Open in IMG/M
3300000956|JGI10216J12902_113084654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria547Open in IMG/M
3300004156|Ga0062589_102861672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300004157|Ga0062590_102472902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia549Open in IMG/M
3300004479|Ga0062595_100834379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria765Open in IMG/M
3300005093|Ga0062594_100816626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria865Open in IMG/M
3300005179|Ga0066684_10376980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria951Open in IMG/M
3300005179|Ga0066684_10488095All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300005184|Ga0066671_10957673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium540Open in IMG/M
3300005347|Ga0070668_101272485Not Available668Open in IMG/M
3300005356|Ga0070674_100459163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1053Open in IMG/M
3300005436|Ga0070713_100768165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium923Open in IMG/M
3300005458|Ga0070681_10957518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria775Open in IMG/M
3300005459|Ga0068867_100406616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1149Open in IMG/M
3300005468|Ga0070707_101873833All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005529|Ga0070741_10884158All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005535|Ga0070684_100588832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1034Open in IMG/M
3300005547|Ga0070693_100309668Not Available1067Open in IMG/M
3300005547|Ga0070693_101400562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300005548|Ga0070665_102015502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium582Open in IMG/M
3300005564|Ga0070664_100046216All Organisms → cellular organisms → Bacteria3678Open in IMG/M
3300005568|Ga0066703_10142718All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300005615|Ga0070702_100088278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1874Open in IMG/M
3300005616|Ga0068852_101330788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia740Open in IMG/M
3300005884|Ga0075291_1038842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria619Open in IMG/M
3300006031|Ga0066651_10218568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1010Open in IMG/M
3300006173|Ga0070716_101309743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300006173|Ga0070716_101793240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300009012|Ga0066710_104488270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria521Open in IMG/M
3300009098|Ga0105245_10349923Not Available1464Open in IMG/M
3300009098|Ga0105245_10760673All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300009098|Ga0105245_11242351All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300009148|Ga0105243_12130311Not Available597Open in IMG/M
3300009176|Ga0105242_10161435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1962Open in IMG/M
3300010045|Ga0126311_11000782All Organisms → cellular organisms → Bacteria → Terrabacteria group683Open in IMG/M
3300010320|Ga0134109_10193747All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300010321|Ga0134067_10431655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia534Open in IMG/M
3300010358|Ga0126370_10873549All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300010358|Ga0126370_11991243All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300010371|Ga0134125_12232945Not Available595Open in IMG/M
3300010373|Ga0134128_11720538All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300011119|Ga0105246_11719934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria597Open in IMG/M
3300011119|Ga0105246_12080917Not Available550Open in IMG/M
3300012201|Ga0137365_10780678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria698Open in IMG/M
3300012203|Ga0137399_11365687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300012209|Ga0137379_11603908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria549Open in IMG/M
3300012211|Ga0137377_10351204All Organisms → cellular organisms → Bacteria → Terrabacteria group1411Open in IMG/M
3300012359|Ga0137385_11517003All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300012359|Ga0137385_11663199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300012363|Ga0137390_10403541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1345Open in IMG/M
3300012532|Ga0137373_10751914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria723Open in IMG/M
3300012582|Ga0137358_10455204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium864Open in IMG/M
3300012905|Ga0157296_10324509Not Available548Open in IMG/M
3300012915|Ga0157302_10188046All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300012923|Ga0137359_11032820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium705Open in IMG/M
3300012924|Ga0137413_11648870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300012930|Ga0137407_10388337Not Available1291Open in IMG/M
3300012943|Ga0164241_10798727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria687Open in IMG/M
3300012955|Ga0164298_10397052Not Available890Open in IMG/M
3300012957|Ga0164303_10064199Not Available1686Open in IMG/M
3300012960|Ga0164301_11064145All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300012977|Ga0134087_10274863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300012984|Ga0164309_10671854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium818Open in IMG/M
3300012987|Ga0164307_10477878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium936Open in IMG/M
3300012988|Ga0164306_10326766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_40CM_67_91128Open in IMG/M
3300012988|Ga0164306_11182449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300013102|Ga0157371_11577570Not Available513Open in IMG/M
3300013105|Ga0157369_11053041All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300013105|Ga0157369_12039332All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300013296|Ga0157374_12223433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria575Open in IMG/M
3300013297|Ga0157378_11305726All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300013306|Ga0163162_11705999Not Available719Open in IMG/M
3300013306|Ga0163162_12567660Not Available586Open in IMG/M
3300013306|Ga0163162_12759924All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300013306|Ga0163162_13144679All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300013772|Ga0120158_10208075Not Available1015Open in IMG/M
3300014325|Ga0163163_12047806Not Available632Open in IMG/M
3300014325|Ga0163163_12450503Not Available580Open in IMG/M
3300014326|Ga0157380_10242682All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300014326|Ga0157380_11449831Not Available738Open in IMG/M
3300014968|Ga0157379_11084395All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300014968|Ga0157379_11289012All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300015371|Ga0132258_10056989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8980Open in IMG/M
3300015373|Ga0132257_101743150All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300017792|Ga0163161_11019814Not Available707Open in IMG/M
3300017959|Ga0187779_10449960All Organisms → cellular organisms → Bacteria → Terrabacteria group846Open in IMG/M
3300018071|Ga0184618_10144958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium966Open in IMG/M
3300018482|Ga0066669_11326277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria652Open in IMG/M
3300021560|Ga0126371_13686050Not Available517Open in IMG/M
3300024254|Ga0247661_1059694All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300025908|Ga0207643_10096769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1727Open in IMG/M
3300025917|Ga0207660_10382619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1131Open in IMG/M
3300025918|Ga0207662_10751809Not Available685Open in IMG/M
3300025922|Ga0207646_11435017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria599Open in IMG/M
3300025922|Ga0207646_11696275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300025931|Ga0207644_10818883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium779Open in IMG/M
3300025934|Ga0207686_10135341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1696Open in IMG/M
3300025934|Ga0207686_10886847All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300025939|Ga0207665_10833241Not Available730Open in IMG/M
3300025972|Ga0207668_10905455All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria785Open in IMG/M
3300026067|Ga0207678_11492786Not Available597Open in IMG/M
3300026088|Ga0207641_11812245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300026089|Ga0207648_12027572Not Available537Open in IMG/M
3300026116|Ga0207674_11051350Not Available783Open in IMG/M
3300026121|Ga0207683_10819423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria864Open in IMG/M
3300026142|Ga0207698_12751621Not Available500Open in IMG/M
3300026530|Ga0209807_1130092All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300026933|Ga0207578_1016923Not Available553Open in IMG/M
3300027842|Ga0209580_10039863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2162Open in IMG/M
3300028802|Ga0307503_10050793Not Available1581Open in IMG/M
3300028802|Ga0307503_10246855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia870Open in IMG/M
3300028880|Ga0307300_10208489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300028884|Ga0307308_10013666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3655Open in IMG/M
3300031366|Ga0307506_10417255Not Available553Open in IMG/M
3300031716|Ga0310813_11306534All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300031962|Ga0307479_10390193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1377Open in IMG/M
3300032126|Ga0307415_101737851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300032179|Ga0310889_10667026Not Available541Open in IMG/M
3300033550|Ga0247829_10030279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3595Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.03%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.42%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.61%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.81%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
2170459023Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)EnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005884Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026933Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0249.000032802166559005SimulatedMAIAYVQEFEIKDGDTSTTNYDAVNAALNLQDAPKDC
FA3_007205802170459023Grass SoilVAIAYVQEFAIKDGDTSTTNYDAVNAALSLQGAPDGL
deepsgr_012802002199352025SoilMTIAYIQEFPIREGEASTANYDAVVAALDLKAAPDGLIVHTAGFDHDAGV
INPhiseqgaiiFebDRAFT_10117972733300000364SoilVAIAYLQEFVIQDGDTSTTNYDAVVAALNLQDAPDGLLIHTAG
JGI10214J12806_1056989823300000891SoilMAIAYLQEFKIRDGDTSTTNYDAVVEALNLTDAPDGLLI
JGI10216J12902_11308465423300000956SoilVAIAYVQEFTIQDGDTSTTNYDAVGAALDLKEAPDGLLIHTAGFDHDA
Ga0062589_10286167213300004156SoilMAIAYLQEFKIRDGDTSTTNYDAVVEALNLTDAPDGLLIHTAG
Ga0062590_10247290223300004157SoilMAIAYVQEFTIQDGDTSTTNYDAVASALNLQDAPDGLLIHT
Ga0062595_10083437933300004479SoilVAVAYLQEFVIQNGDTSTTNYDAVAAELGLADVPDGLLIHTAGFDHDA
Ga0062594_10081662623300005093SoilVAVAYIQEFEIQAGDTSTTNYDAVVAALDLRDAPDGLLIHTAGFDHDSGVFRVFDV
Ga0066684_1037698013300005179SoilVAIAYVQEFTIQGGDTSTTNYDAVVAALDLKDAPDGLLIHTAGFDHDAGVFRIFDVWETR
Ga0066684_1048809513300005179SoilMAIAYVQEFMIQNGDTSTTNYDAVVAALNLQQAPDGLLIHTAGFDHDAGV
Ga0066671_1095767313300005184SoilMAIAYVQEFDIVDGNTSTTNYDSIAEKLGNEPGVPGLIVHT
Ga0070668_10127248523300005347Switchgrass RhizosphereVPIAYIQEFPMVDGDTSTTNYDAVVSKLDLQGAAPQGLLLHSAGFDTDA
Ga0070674_10045916313300005356Miscanthus RhizosphereVAIAYIQEFEIQAGDTSTTNYDAVVAALDLREAPDGLLIHTAGFDHD
Ga0070713_10076816533300005436Corn, Switchgrass And Miscanthus RhizosphereMAIAYVQEFKIEDGDTSTTNYDAVSAALNLQEAPDGLLIHTA
Ga0070681_1095751813300005458Corn RhizosphereVAVAYLQEFVIQNGDTSTTNYDAVAAELGLADVPDGLLIHTAGFDHD
Ga0068867_10040661633300005459Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDTDAGVFRIFDVWQTREDGERFMTER
Ga0070707_10187383323300005468Corn, Switchgrass And Miscanthus RhizosphereVAIVYLQEFTIQDGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDH
Ga0070741_1088415813300005529Surface SoilVAVAFVQEFPIQDGDTSTTNYDAVVEALDLKEAPKGL
Ga0070684_10058883213300005535Corn RhizosphereVAIAYLQEFEIQDGDTSTTNYDAVVAALNLQSAPDGLLIHTAGFDH
Ga0070693_10030966823300005547Corn, Switchgrass And Miscanthus RhizosphereVAVVYIQEFPIQSEDTSNYDAVVAALDLKGPPDGLIVHTAGFDRDAGVFRILDVWESKAQGERFNN
Ga0070693_10140056213300005547Corn, Switchgrass And Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDTDAGVFRIFDVWQTREDGER
Ga0070665_10201550213300005548Switchgrass RhizosphereMAIAYVQEFAIVDGDLSTENYDRVVTELGLQEAPDGLT
Ga0070664_10004621663300005564Corn RhizosphereMAIAFMQEWPIKDGDTSTTNYDAVSAELNVQQAPDGLLIHTAGFDHDSGV
Ga0066703_1014271833300005568SoilVAIAYVQEFTIQGGDTSTTNYDAVVAALDLKDAPDGL
Ga0070702_10008827843300005615Corn, Switchgrass And Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDTDAGVFRIFDVWQTREDGERFMTE
Ga0068852_10133078813300005616Corn RhizosphereMAAAYVQEFAIRDRDTGNYDAVVAKLDLQEPPDGLIVHTAGFDDDAGVFRIFDV*
Ga0075291_103884213300005884Rice Paddy SoilVAIAFIQEWPIRDGDTSTTNYDAVVAELDVQQAPDGLLIHTAGFDHD
Ga0066651_1021856823300006031SoilVAIAYLQEFTIKDGDTSTTNYDSVVAALDLQGNAPDGLLIHTAGFDHDGGVFR
Ga0070716_10130974313300006173Corn, Switchgrass And Miscanthus RhizosphereVAIAYLQEFTIQNGDTSTKNYDAVAAALNLQGAPNGLLIHTAG
Ga0070716_10179324023300006173Corn, Switchgrass And Miscanthus RhizosphereVAIAYLQEFKIQDGDTSTANYDAVAAALNLKDAPDGLLIHTAGFDHDGGVFRILDVWETREQGEKFI
Ga0066710_10448827023300009012Grasslands SoilVAIAYVQEFTIQDGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHDAVVFRILDVWQTRGQAEAFINVRLNPIIEPQAAAGPQR
Ga0105245_1034992343300009098Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDAVVSKLDLQGAVPQGLLLHSAGF
Ga0105245_1076067313300009098Miscanthus RhizosphereMAIAYVQEFEIVDGDTSTTNYDAISQRLNLDSAPA
Ga0105245_1124235123300009098Miscanthus RhizosphereMQEWPIKDGDTSTTNYDAVSAELNLQHAPDGMLIHTAGFD
Ga0105243_1213031113300009148Miscanthus RhizosphereMAIVYVQEFDVPAGDRSTTNYDAIRERLGAESDVP
Ga0105242_1016143513300009176Miscanthus RhizosphereMAVAYVQEFTINDGDTSTTNYDAVSDALSLKAPPAGLIAHTAGF
Ga0126311_1100078213300010045Serpentine SoilVAVAYLQEFEIQDGDTSTTNYDAVVEALDLTEAPDGLLIHTAGFDHDAGVFRIFDV
Ga0134109_1019374713300010320Grasslands SoilMAIAYVQEFMIQNGDTSTTNYDAVVAALNLQQAPD
Ga0134067_1043165513300010321Grasslands SoilMAIAYVQEFVIQNGDTSTTNYDAVVAALNLQQAPD
Ga0126370_1087354933300010358Tropical Forest SoilMAVAYIQEFDIVDGDTSTTNYDAVSSALNLSSAPDGLIAHTA
Ga0126370_1199124323300010358Tropical Forest SoilMAVAFMQEWPIVDGDTSTTNYDAVAAELNLAQAPDGLLIHTAGFDH
Ga0134125_1223294523300010371Terrestrial SoilVAIAFIQEFPIMDGDTSTTNYNAVVSKLDLQGAVPQGLLLH
Ga0134128_1172053813300010373Terrestrial SoilMPVAFIQEFAIRDGDTSTTNYDAVTAELNLQEAPDGALIHTAGFDTDAGV
Ga0105246_1171993413300011119Miscanthus RhizosphereMAVVYVQEFAIRDGDTRTDNYDAVVAKLDLQGPPEGLIVHTAGYDLEAGVFRILDVWETRAQGQRF
Ga0105246_1208091713300011119Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDTDAGVFRIFD
Ga0137365_1078067813300012201Vadose Zone SoilVPIAFLQEFEIQGGDTSTTNYDAVSAELNLQEAPDGLLIHTAGFDHDSGVFRIFD
Ga0137399_1136568713300012203Vadose Zone SoilVAIAYLQEFTIQNGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDLDAGVFRILDVWETRAQGEKFIN
Ga0137379_1160390813300012209Vadose Zone SoilMVARNPTRTELHMAIAYVQEFEIKDGDTSTTNYDAVNAALDLQDAPDGLLIHTAGFDLDAGV
Ga0137377_1035120413300012211Vadose Zone SoilMQALSTKRSPKVAIAYLQEFTIQDGDTSTTNYDAVNAALDLKGAPDGLLIHTAGFDH
Ga0137385_1151700313300012359Vadose Zone SoilVAIAYLQEFKIQDGDTSTANYDAVNAALNLQTAPDGLLIHTAGFD
Ga0137385_1166319913300012359Vadose Zone SoilVAIAYVQEFDIKDGDTSTTNYDAVNAALDLQGAPDGLLIHTAGFDLDAG
Ga0137390_1040354133300012363Vadose Zone SoilVAIAYVQEFEIKDGDTSTTNYDAVNAALNLQGAPEGLLIHTAGFDLD
Ga0137373_1075191413300012532Vadose Zone SoilVAIAYVQEFEIQGGDTSTTNYDAVAAALNLQEAPEGLLIHTAGFDHDAGVFRILDVWETREHG
Ga0137358_1045520443300012582Vadose Zone SoilMAIAYLQEFTIQDGDTSTTNYDAVTAALNLQETPDGLL
Ga0157296_1032450913300012905SoilMAIAYLQEFQIRDGDTSTTNYDAVVEALNLTDAPDG
Ga0157302_1018804613300012915SoilMQEWPIKDGDTSTTNYDAVSAELNVQQAPDGLLIHTA
Ga0137359_1103282023300012923Vadose Zone SoilVAIAYLQEFTIQNGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHDAGVF
Ga0137413_1164887013300012924Vadose Zone SoilVPIAYVQEFEIKDGDTSTTNYDAVNAALNLQSAPDGLLIHTAGFDLDAGVFRIFDV
Ga0137407_1038833723300012930Vadose Zone SoilMAVAYLQEFTIQNGDTSTTNYDAVTAALDLKDAPDGLLIHTAGF
Ga0164241_1079872713300012943SoilVPIAYIQEFPIVDGDTSTTNYDAVAAKLDLQGAAPQGLLLHSAGFDHDAGVFR
Ga0164298_1039705223300012955SoilMQEWPIQDGDTSTTNYDAVSAELNLQQAPEGLLIHTA
Ga0164303_1006419913300012957SoilVAVVYIQEFPIQSEDTSNYDAVVAALDLKGPPDGLIVHTAGFDRDAGVFRILDV
Ga0164301_1106414513300012960SoilMAVAYLQEFTIKDGDTSTTNYDAVVAALNLQEAPDGLLIHTAGFDHDA
Ga0134087_1027486323300012977Grasslands SoilVAIAYVQEFTIQGGDTSTTNYDAVVAALDLKDAPDGLLIHTAGFDHDAGVFRIFD
Ga0164309_1067185413300012984SoilMAIAYLQEFQIRDGDTSTTNYDAVVEELNLTDTPD
Ga0164307_1047787823300012987SoilMAIAYVQEFKILDGDTSTTNYDAVNAALDLKSAPDGLLIHTAGFDHDAGVFRILDVWETRAQGEKFIN
Ga0164306_1032676613300012988SoilMAIAYVQEFKILDGDTSTTNYDAVNAALDLKSAPDG
Ga0164306_1118244923300012988SoilVAVVYLQEFTIQNGDTSTKNYDAVAAALNLQGAPNGLLIHTAGFDLDAGVFRILDVWETR
Ga0157371_1157757023300013102Corn RhizosphereVAIAYVQEFKIKDGDTSTTNYDAVNDALNLQSAPEGLL
Ga0157369_1105304123300013105Corn RhizosphereMAIAFMQEWPIQDGDTSTTNYDAVSTELNLEQAPDGLLIHTAGFDH
Ga0157369_1203933213300013105Corn RhizosphereMPVAYVQEFKIRDGDTSTTNYDAVAAELNLSDPPDGGLIHTAGFDL
Ga0157374_1222343323300013296Miscanthus RhizosphereVAIAYVQEFEIKDGDTSTTNYDAVNAALNLQGAPEGLLIHTAGFDLDAG
Ga0157378_1130572623300013297Miscanthus RhizosphereVAVAYLQEFTIKDGDTSTTNYDAVTKALDLQEAPDGLLIHTAGFDHD
Ga0163162_1170599913300013306Switchgrass RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDTDAGVFRI
Ga0163162_1256766013300013306Switchgrass RhizosphereVAIAFIQEFPIVDGDTSTTNYDAVVSKLDLQGAVPQGLLLHSAGFDTDAG
Ga0163162_1275992423300013306Switchgrass RhizosphereVAVVYIQEFPIQSDDTSNYDAVVKALDLKGAPDGLIVHTAGFDRDAGVFRILDVWESRAQGERFNNDQLGPI
Ga0163162_1314467923300013306Switchgrass RhizosphereMAIAYVQEFEIVDGDTSTTNYDAISQRLNLDSAPAGLIAHTAGFDDEKGVFR
Ga0120158_1020807513300013772PermafrostMAIAYVQEFEIKGGDTSTTNYDAVNAALNLQGAPEGLLIHTAGFDLDAGLFRIFDVWEPREH
Ga0163163_1204780613300014325Switchgrass RhizosphereMAIAFIQEFPIVDGDTSTTNYDAVVSKLDLQGSVPQGLLLHSAGFDADAG
Ga0163163_1245050313300014325Switchgrass RhizosphereVAIAYVQEFEIKDGDTSTTNYDAVNAALNLQGAPEGLLIHTAGFD
Ga0157380_1024268213300014326Switchgrass RhizosphereMAVAYVQEFTIVDGDTSTKNDDAVNDALGLSAAPQ
Ga0157380_1144983123300014326Switchgrass RhizosphereVAVVYIQEFPIQSEDTSNYDAVVAALDLKGPPDGLIVHTAGF
Ga0157379_1108439513300014968Switchgrass RhizosphereMAIAFMQEWPIQDGDTSTTNYDAVSTELNLEQAPDGLLIHTAGFDHD
Ga0157379_1128901223300014968Switchgrass RhizosphereMAIAYVQEFEIVDGDTSTTNYDAISQRLNLDSAPDGLIVHTAGFD
Ga0132258_10056989103300015371Arabidopsis RhizosphereMAVAYIQEFDIVDGDTSTTNYDAVVEALNLSSAPDGLIAHTAG
Ga0132257_10174315013300015373Arabidopsis RhizosphereMAIAYVQEFAIVDGDTSTTNYDAISKELNLQSPPD
Ga0163161_1101981413300017792Switchgrass RhizosphereVAVVYIQEFPIQSEDTSNYDAVVAALDLKGPPDGLIVHTAGFDRDAGV
Ga0187779_1044996023300017959Tropical PeatlandVAVAYVQEFEIRDGNTSTANYDAVVAGVNLQAAPDGLLIHTAGFDMDAGVFRIFDVWETREQG
Ga0184618_1014495823300018071Groundwater SedimentVAIAYLQEFTIQNGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHD
Ga0066669_1132627713300018482Grasslands SoilVAIAYVQEFTIQGGDTSTTNYDAVVAALDLKDAPDGLLIHTAGFDHDAGVFRIFDVWETRGQGEKFIN
Ga0126371_1368605013300021560Tropical Forest SoilMAVVYLQEFAIVNGDTSTTNYDAVVAALNLKEAPDG
Ga0247661_105969423300024254SoilVAIAYLQEFEIQDGDTSTTNYDAVVAALNLQSAPDGLLIHTAGFDHDAGVFRIL
Ga0207643_1009676913300025908Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDTDAGVFRIFDV
Ga0207660_1038261933300025917Corn RhizosphereMAIAFMQEWPIQDGDTSTTNYDAVSTELNLEQAPDGLLIHTAGFDHDSGVFRVFDV
Ga0207662_1075180923300025918Switchgrass RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDTDAGVFRIF
Ga0207646_1143501723300025922Corn, Switchgrass And Miscanthus RhizosphereVAIVYLQEFTIQDGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHDAGVFRILD
Ga0207646_1169627513300025922Corn, Switchgrass And Miscanthus RhizosphereMAIGYLQEFEIQDGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHEAGVFRIFDVWETR
Ga0207644_1081888313300025931Switchgrass RhizosphereVAIAYVQEFKIKDGDTSTTNYDAVNAALNLQVAPEGL
Ga0207686_1013534113300025934Miscanthus RhizosphereMAVAYVQEFKINDGDTSTTNYDAVSDALSLKSPPAG
Ga0207686_1088684723300025934Miscanthus RhizosphereVAIAFMQEWPIQDGDTSTTNYDAVSTELNLEQAPDGLLIHTA
Ga0207665_1083324113300025939Corn, Switchgrass And Miscanthus RhizosphereVAVVYIQEFPIQSEDTSNYDAVVAALDLKGPPDGLIVHTAGFDRDAGVFRILDVWESKAQGERFNND
Ga0207668_1090545523300025972Switchgrass RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDTDAGVFRIFDVWQTREDGERFM
Ga0207678_1149278623300026067Corn RhizosphereVAIAYVQEFEIKDGDTSTTNYDAVNAALNLQGAPEG
Ga0207641_1181224513300026088Switchgrass RhizosphereVAIAYVQEFKIKDGDTSTTNYDAVNAALNLQVAPEGLLIHTAGFDLDAG
Ga0207648_1202757213300026089Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDAVVSKLDLQGAVPQ
Ga0207674_1105135013300026116Corn RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSA
Ga0207683_1081942323300026121Miscanthus RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDTDAGVFRIFDVWQTREDGERFM
Ga0207698_1135168323300026142Corn RhizosphereMAIAFIQEFPIVDGDTSTTNYDAVVQKLDLGRTAV
Ga0207698_1275162113300026142Corn RhizosphereVAIAFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDT
Ga0209807_113009233300026530SoilMPVAFVQEFAIRDGDTSTENYDAVASALNIQHAPDGALIHTAGFDLDAGVFRIFDVWETREQGE
Ga0207578_101692313300026933SoilMTVVFIQEFPIVDGDTSTTNYDTVVSKLDLQGAVPQGLLLHSAGFDTDAGV
Ga0209580_1003986313300027842Surface SoilVAIAYVQEFTIQDGDTSTTNYDAVNSALNLQEAPDGLLIHT
Ga0307503_1005079313300028802SoilVAIAFIQEFTIVDGDTSTTNYDAVVAKLGLQGAAPQGLLLH
Ga0307503_1024685523300028802SoilMAVAYLQEFKIVDGDTSTTNYDSVAEKLNLTTAPDGLIVHT
Ga0307300_1020848933300028880SoilVAVAYVQEFQIQGGDTSTTNYDAVVAELGLQDAPDGLLIHTAGFDHTSG
Ga0307308_1001366613300028884SoilVAIAYLQEFTIQNGDTSTTNYDAVVAALNLQDAPDGLLIHTAGFDHDAGVFRILDV
Ga0307506_1041725513300031366SoilMAVVYIQEFPIQNEDTSNYDAVVAALDLKAAPDGLIVHTAGFDRDAGVFRILDVWESRA
Ga0310813_1130653423300031716SoilMAIAYVQEFEIVDGDTSTTNYDAISQRLNLDSAPDG
Ga0307479_1039019313300031962Hardwood Forest SoilMAIAYVQEFTIQAGDTSTTNYVAVNAALNLQEAPDGLL
Ga0307415_10173785113300032126RhizosphereMAVAYLQEFEIQDGDTSTTNYDAVVEALNLQETPEGLLIHTAGFDHDAGV
Ga0310889_1066702613300032179SoilVAIAFIQEFPIVDGDTSTTNYDTVVSRLDLQGAVPQGLLLHSAGFDSDAGVFRIFD
Ga0247829_1003027973300033550SoilVAIAFIQEFPIMDGDTSTTNYDAVVSKLDLQGAVPQGLLLHSAG

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