Metagenome / Metatranscriptome Family F069213

Basic Information
Family ID	F069213
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	50 residues
Representative Sequence	GVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ
Number of Associated Samples	109
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.61 %
% of genes near scaffold ends (potentially truncated)	98.39 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (55.645 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.710 % of family members)
Environment Ontology (ENVO)	Unclassified (24.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.194 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.18% β-sheet: 0.00% Coil/Unstructured: 40.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF13662	Toprim_4	77.42
PF02132	RecR	8.06
PF03401	TctC	4.03
PF02646	RmuC	2.42
PF07690	MFS_1	1.61
PF01061	ABC2_membrane	0.81
PF00496	SBP_bac_5	0.81
PF11196	DUF2834	0.81
PF13577	SnoaL_4	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0353	Recombinational DNA repair protein RecR	Replication, recombination and repair [L]	8.06
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.03
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	2.42

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
All Organisms	root	All Organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
cellular organisms	root	All Organisms → cellular organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	1.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %
Rhodoplanes elegans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01ARS91	Not Available	666	Open in IMG/M
3300000531\|CNBas_1010794	Not Available	559	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10032523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1219	Open in IMG/M
3300002911\|JGI25390J43892_10076560	Not Available	763	Open in IMG/M
3300005093\|Ga0062594_100706629	Not Available	911	Open in IMG/M
3300005166\|Ga0066674_10081301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1492	Open in IMG/M
3300005178\|Ga0066688_10012416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4256	Open in IMG/M
3300005332\|Ga0066388_100322316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2191	Open in IMG/M
3300005332\|Ga0066388_101308408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300005332\|Ga0066388_103831865	Not Available	767	Open in IMG/M
3300005332\|Ga0066388_108031541	Not Available	527	Open in IMG/M
3300005344\|Ga0070661_100021686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4592	Open in IMG/M
3300005437\|Ga0070710_10111946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1641	Open in IMG/M
3300005445\|Ga0070708_100054090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3564	Open in IMG/M
3300005459\|Ga0068867_102168490	Not Available	527	Open in IMG/M
3300005467\|Ga0070706_101663977	Not Available	582	Open in IMG/M
3300005468\|Ga0070707_100105155	All Organisms → cellular organisms → Bacteria → Proteobacteria	2737	Open in IMG/M
3300005539\|Ga0068853_101331960	Not Available	694	Open in IMG/M
3300005553\|Ga0066695_10542913	Not Available	708	Open in IMG/M
3300005554\|Ga0066661_10453044	Not Available	783	Open in IMG/M
3300005558\|Ga0066698_10843662	Not Available	590	Open in IMG/M
3300005713\|Ga0066905_101367465	Not Available	640	Open in IMG/M
3300005764\|Ga0066903_101740443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300005764\|Ga0066903_106552278	Not Available	606	Open in IMG/M
3300005937\|Ga0081455_10787016	Not Available	598	Open in IMG/M
3300005981\|Ga0081538_10200398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	821	Open in IMG/M
3300006028\|Ga0070717_10562836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1033	Open in IMG/M
3300006028\|Ga0070717_10910910	Not Available	800	Open in IMG/M
3300006028\|Ga0070717_10957693	Not Available	779	Open in IMG/M
3300006038\|Ga0075365_10285396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1161	Open in IMG/M
3300006173\|Ga0070716_101726573	Not Available	517	Open in IMG/M
3300006576\|Ga0074047_12057581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3191	Open in IMG/M
3300006578\|Ga0074059_12169226	All Organisms → cellular organisms → Bacteria → Proteobacteria	2742	Open in IMG/M
3300006852\|Ga0075433_11836726	Not Available	521	Open in IMG/M
3300006871\|Ga0075434_100475661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300009012\|Ga0066710_100451902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1927	Open in IMG/M
3300009792\|Ga0126374_10542175	Not Available	847	Open in IMG/M
3300010047\|Ga0126382_11452162	Not Available	628	Open in IMG/M
3300010301\|Ga0134070_10053989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300010326\|Ga0134065_10202655	Not Available	719	Open in IMG/M
3300010360\|Ga0126372_12588247	Not Available	559	Open in IMG/M
3300010361\|Ga0126378_13057710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300010376\|Ga0126381_101551543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	957	Open in IMG/M
3300010376\|Ga0126381_102913947	Not Available	681	Open in IMG/M
3300010398\|Ga0126383_11333251	Not Available	808	Open in IMG/M
3300010398\|Ga0126383_11544404	Not Available	753	Open in IMG/M
3300010398\|Ga0126383_11716511	Not Available	717	Open in IMG/M
3300010398\|Ga0126383_13478890	Not Available	514	Open in IMG/M
3300011107\|Ga0151490_1012045	Not Available	585	Open in IMG/M
3300011401\|Ga0153984_1063580	Not Available	777	Open in IMG/M
3300012361\|Ga0137360_11070286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	696	Open in IMG/M
3300012361\|Ga0137360_11855685	Not Available	508	Open in IMG/M
3300012362\|Ga0137361_10229283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1687	Open in IMG/M
3300012362\|Ga0137361_11669026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	557	Open in IMG/M
3300012362\|Ga0137361_11755101	Not Available	539	Open in IMG/M
3300012918\|Ga0137396_10845829	Not Available	672	Open in IMG/M
3300012923\|Ga0137359_11292952	Not Available	617	Open in IMG/M
3300012929\|Ga0137404_10186789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1748	Open in IMG/M
3300012941\|Ga0162652_100016699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	983	Open in IMG/M
3300012958\|Ga0164299_10055223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1878	Open in IMG/M
3300012960\|Ga0164301_10337164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1031	Open in IMG/M
3300013296\|Ga0157374_10013462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7138	Open in IMG/M
3300014745\|Ga0157377_10019634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3532	Open in IMG/M
3300015077\|Ga0173483_10602100	Not Available	605	Open in IMG/M
3300016294\|Ga0182041_12091285	Not Available	528	Open in IMG/M
3300016371\|Ga0182034_11989039	Not Available	514	Open in IMG/M
3300016422\|Ga0182039_12235832	Not Available	505	Open in IMG/M
3300017965\|Ga0190266_10818895	Not Available	600	Open in IMG/M
3300018431\|Ga0066655_10580341	Not Available	753	Open in IMG/M
3300018481\|Ga0190271_10038346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3957	Open in IMG/M
3300019886\|Ga0193727_1070759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300020016\|Ga0193696_1056385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1032	Open in IMG/M
3300020580\|Ga0210403_11372277	Not Available	537	Open in IMG/M
3300021082\|Ga0210380_10084146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1398	Open in IMG/M
3300021432\|Ga0210384_10427078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300025898\|Ga0207692_10077212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1771	Open in IMG/M
3300025901\|Ga0207688_10918955	Not Available	554	Open in IMG/M
3300025903\|Ga0207680_10610362	Not Available	780	Open in IMG/M
3300025919\|Ga0207657_10821882	Not Available	718	Open in IMG/M
3300025920\|Ga0207649_10012614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4694	Open in IMG/M
3300025922\|Ga0207646_10870724	Not Available	800	Open in IMG/M
3300025932\|Ga0207690_11468616	Not Available	570	Open in IMG/M
3300025972\|Ga0207668_10849958	Not Available	810	Open in IMG/M
3300025986\|Ga0207658_10381607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1234	Open in IMG/M
3300026035\|Ga0207703_10650049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300026309\|Ga0209055_1143357	Not Available	845	Open in IMG/M
3300026322\|Ga0209687_1289150	Not Available	517	Open in IMG/M
3300026327\|Ga0209266_1283280	Not Available	522	Open in IMG/M
3300026878\|Ga0208891_1000675	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300027266\|Ga0209215_1053957	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027310\|Ga0207983_1043457	Not Available	581	Open in IMG/M
3300027502\|Ga0209622_1035332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300027654\|Ga0209799_1012143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1855	Open in IMG/M
3300028380\|Ga0268265_12597026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	512	Open in IMG/M
3300028587\|Ga0247828_11169512	Not Available	513	Open in IMG/M
3300028754\|Ga0307297_10022640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300028778\|Ga0307288_10186233	Not Available	795	Open in IMG/M
3300028782\|Ga0307306_10073329	Not Available	883	Open in IMG/M
3300028803\|Ga0307281_10280093	Not Available	618	Open in IMG/M
3300028828\|Ga0307312_10322914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1007	Open in IMG/M
3300028828\|Ga0307312_10710296	Not Available	666	Open in IMG/M
3300028875\|Ga0307289_10137521	Not Available	1003	Open in IMG/M
3300028885\|Ga0307304_10122507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1060	Open in IMG/M
3300031544\|Ga0318534_10308598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300031546\|Ga0318538_10386598	Not Available	757	Open in IMG/M
3300031572\|Ga0318515_10065630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1856	Open in IMG/M
3300031668\|Ga0318542_10611913	Not Available	568	Open in IMG/M
3300031682\|Ga0318560_10309688	Not Available	851	Open in IMG/M
3300031719\|Ga0306917_11377092	Not Available	544	Open in IMG/M
3300031771\|Ga0318546_10306268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1100	Open in IMG/M
3300031782\|Ga0318552_10638993	Not Available	543	Open in IMG/M
3300031796\|Ga0318576_10516358	Not Available	563	Open in IMG/M
3300031833\|Ga0310917_11122363	Not Available	524	Open in IMG/M
3300031845\|Ga0318511_10014272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2773	Open in IMG/M
3300031893\|Ga0318536_10374054	Not Available	720	Open in IMG/M
3300032001\|Ga0306922_12346540	Not Available	510	Open in IMG/M
3300032010\|Ga0318569_10044733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1897	Open in IMG/M
3300032010\|Ga0318569_10126608	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300032067\|Ga0318524_10061778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1804	Open in IMG/M
3300032261\|Ga0306920_102196887	Not Available	767	Open in IMG/M
3300033289\|Ga0310914_10549215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1043	Open in IMG/M
3300033412\|Ga0310810_10050764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5055	Open in IMG/M
3300033550\|Ga0247829_11368292	Not Available	585	Open in IMG/M
3300034150\|Ga0364933_119325	Not Available	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.26%
Host-Associated	Host-Associated	16.94%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.45%
Plants	Host-Associated → Plants	16.13%
Aquatic	Environmental → Aquatic	0.81%
Fungi	Host-Associated → Fungi	0.81%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Roots	Host-Associated → Plants → Roots	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.81%
Mycelium	Host-Associated → Fungi → Mycelium	0.81%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.71%
Loam	Environmental → Terrestrial → Soil → Loam	16.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.81%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000531	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026878	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_01661210	2170459015	Switchgrass, Maize And Mischanthus Litter	LETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
CNBas_10107941	3300000531	Quercus Rhizosphere	TCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
AF_2010_repII_A001DRAFT_100325233	3300000793	Forest Soil	ACHVLTCRFLAQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFSLRQLITALRAPATSTPVQ*
JGI25390J43892_100765601	3300002911	Grasslands Soil	RFATYLETAMAEMAPGLEDKRTLFSLRQLIAALRAPPTATPVQ*
Ga0062594_1007066292	3300005093	Soil	RFLVQEGVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ*
Ga0066674_100813011	3300005166	Soil	DRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ*
Ga0066688_100124165	3300005178	Soil	AYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ*
Ga0066388_1003223163	3300005332	Tropical Forest Soil	FLAQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFSLRQLITALRAPATSTPVQ*
Ga0066388_1013084081	3300005332	Tropical Forest Soil	EGVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAMQ*
Ga0066388_1038318652	3300005332	Tropical Forest Soil	RFLVQEGVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ*
Ga0066388_1080315412	3300005332	Tropical Forest Soil	AYLETAMAEMAPGIEDKRTLFSLRQLIAALRAPSASTAMQ*
Ga0070661_1000216861	3300005344	Corn Rhizosphere	RFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0070710_101119463	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LACHILTCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0070708_1000540901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TCRFLVQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0068867_1021684901	3300005459	Miscanthus Rhizosphere	GVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ*
Ga0070706_1016639771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ*
Ga0070707_1001051551	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TCRFLVQEGVVDKDRFTAYLETAMEEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0068853_1013319601	3300005539	Corn Rhizosphere	CRFLAQEGVVDRDRFTAYLETAMAEMAPGIEDQRALFGLRQLIAALRAPLRSPPMQ*
Ga0066695_105429131	3300005553	Soil	AMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ*
Ga0066661_104530441	3300005554	Soil	ACHVLTCRFLAQEGVVDSDRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ*
Ga0066698_108436621	3300005558	Soil	ACHVLTCRFLAQEGVIDKDRFAAYLETALAEMASGIEDQRSLFSLRQLIQALRAPLTSAAVQ*
Ga0066905_1013674652	3300005713	Tropical Forest Soil	QEGVVDKDRFAAYLENAMAEMAPGIEDKRALFSLRQLIAALRAPPTATPVQ*
Ga0066903_1017404433	3300005764	Tropical Forest Soil	VLTCRFLAQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPTSTPVQ*
Ga0066903_1065522782	3300005764	Tropical Forest Soil	TAMEEMAPGIEDQRALFGLRQLIAALRAPLTSTPVQ*
Ga0081455_107870161	3300005937	Tabebuia Heterophylla Rhizosphere	EKDRFTAYLETAMAEMAPGIEDKRTLFGLRQLITALRAPPASAVQ*
Ga0081538_102003981	3300005981	Tabebuia Heterophylla Rhizosphere	MAEMAPGIEDKRTLFSLRQLIAALRAPPSSTPMQ*
Ga0070717_105628361	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HILTCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0070717_109109101	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTTAVQ*
Ga0070717_109576932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0075365_102853963	3300006038	Populus Endosphere	VQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0070716_1017265731	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0074047_120575814	3300006576	Soil	AMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0074059_121692261	3300006578	Soil	MAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0075433_118367262	3300006852	Populus Rhizosphere	YLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0075434_1004756611	3300006871	Populus Rhizosphere	DRFTAYLETAMEEMAPGIEDQRALFGLRQLIAALRAPLTSTPVQ*
Ga0066710_1004519023	3300009012	Grasslands Soil	FLAQEGVVDSDRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ
Ga0126374_105421752	3300009792	Tropical Forest Soil	FLVQEGVVEKDRFTAYLEAAMAEMAPAIEDKRTLFGLRQLIAALRAPPASTAMQ*
Ga0126382_114521622	3300010047	Tropical Forest Soil	CHVLTCRFLVQEGVVEKDRFTAYLETAMAEMAPGIEDKRTLFGLRQLITALRAQSASTAVQ*
Ga0134070_100539894	3300010301	Grasslands Soil	DSDRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ*
Ga0134065_102026551	3300010326	Grasslands Soil	LTCRFLAQEGVVDSDRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ*
Ga0126372_125882472	3300010360	Tropical Forest Soil	VQEGVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ*
Ga0126378_130577101	3300010361	Tropical Forest Soil	ETAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAMQ*
Ga0126381_1015515431	3300010376	Tropical Forest Soil	GVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ*
Ga0126381_1029139471	3300010376	Tropical Forest Soil	KDRFTAYLEAAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ*
Ga0126383_113332511	3300010398	Tropical Forest Soil	TAYLEAAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ*
Ga0126383_115444042	3300010398	Tropical Forest Soil	VDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPTSTPVQ*
Ga0126383_117165111	3300010398	Tropical Forest Soil	VVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPPASTAVQ*
Ga0126383_134788902	3300010398	Tropical Forest Soil	FLVQEGVVEKDRFTAYLETAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAMQ*
Ga0151490_10120451	3300011107	Soil	HILTCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0153984_10635801	3300011401	Attine Ant Fungus Gardens	EGVVDKDRFTAYLESAMAEMVPGIEDKRTLFSLRQLITALRGPLPSTAVQ*
Ga0137360_110702862	3300012361	Vadose Zone Soil	LTCRFLVQEGVLDKDRFTAYLESAMAEMAPGIEDKRTLFALRQLITALRAPLTSTAVQ*
Ga0137360_118556851	3300012361	Vadose Zone Soil	VQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0137361_102292831	3300012362	Vadose Zone Soil	YLESAMAEMAPGIEDKRTLFALRQLITALRAPLTSTAVQ*
Ga0137361_116690262	3300012362	Vadose Zone Soil	VQEGVVDKDRFTAYLESAMAEMSPGIEDKRTLFALRQLITALRAPLTSTAVQ*
Ga0137361_117551011	3300012362	Vadose Zone Soil	TAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ*
Ga0137396_108458292	3300012918	Vadose Zone Soil	EGVLDKDRFTAYLESAMAEMAPGIEDKRTLFALRQLITALRAPLTSTAVQ*
Ga0137359_112929522	3300012923	Vadose Zone Soil	RFLVQEGVLDKDRFTAYLESAMAEMAPGIEDKRTLFALRQLITALRAPLTSTAVQ*
Ga0137404_101867893	3300012929	Vadose Zone Soil	ILTCRFLVQEGVVDRERFTAYLETAMEEMAPGIEDKRTLFSLRQLIAALRAPPTATPVQ*
Ga0162652_1000166993	3300012941	Soil	LVQEGVVDQDRFSVYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ*
Ga0164299_100552231	3300012958	Soil	TAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ*
Ga0164301_103371643	3300012960	Soil	LAQEGVVDRDRFTAYLETAMAEMAPGIEDQRALFGLRQLIAALRAPLTSPPMQ*
Ga0157374_100134621	3300013296	Miscanthus Rhizosphere	RFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVISKPVQ*
Ga0157377_100196341	3300014745	Miscanthus Rhizosphere	LETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0173483_106021002	3300015077	Soil	SYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ*
Ga0182041_120912851	3300016294	Soil	GVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0182034_119890391	3300016371	Soil	DRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0182039_122358322	3300016422	Soil	AYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0190266_108188951	3300017965	Soil	RFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0066655_105803412	3300018431	Grasslands Soil	HVLTCRFLVQEGVVDKDRFTAYLETAMEEMAPGIEDQRALFGLRQLIAALRAPLTSTPVQ
Ga0190271_100383461	3300018481	Soil	LETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0193727_10707591	3300019886	Soil	SSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0193696_10563851	3300020016	Soil	TCRFLVQQGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0210403_113722772	3300020580	Soil	GVVDRDRFTAYLETAMAEMAPGIEDQRALFGLRQLIAALRAPLTSPPMQ
Ga0210380_100841463	3300021082	Groundwater Sediment	VVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0210384_104270783	3300021432	Soil	FLVQEGVVDKDRFIAYLESAMAEMAPGIEDPRALFGLRQLIAALRAPLTSTPMQ
Ga0207692_100772121	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0207688_109189552	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TCRFLVQEGVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0207680_106103621	3300025903	Switchgrass Rhizosphere	CRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0207657_108218822	3300025919	Corn Rhizosphere	YLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0207649_100126141	3300025920	Corn Rhizosphere	ILTCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0207646_108707242	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTTAVQ
Ga0207690_114686161	3300025932	Corn Rhizosphere	ILTCRFLVQEGVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0207668_108499582	3300025972	Switchgrass Rhizosphere	YLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0207658_103816073	3300025986	Switchgrass Rhizosphere	GVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0207703_106500493	3300026035	Switchgrass Rhizosphere	FLVQEGVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0209055_11433572	3300026309	Soil	LTCRFLVQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ
Ga0209687_12891502	3300026322	Soil	FLACHVLTCRFLAQEGVVDSDRFTAYLESAMAEMAPGIEDQRTLFALRQLITALRAPRTSTAVQ
Ga0209266_12832802	3300026327	Soil	LACHVLTCRFLVQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTTAVQ
Ga0208891_10006752	3300026878	Soil	FSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0209215_10539571	3300027266	Forest Soil	DKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ
Ga0207983_10434571	3300027310	Soil	HVLTCRFLVQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAMQ
Ga0209622_10353323	3300027502	Forest Soil	VDKDRFTAYLESAMAEMAPGIEDKRTLFSLRQLITALRGPLPSTAVQ
Ga0209799_10121431	3300027654	Tropical Forest Soil	LACHVLTCRFLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ
Ga0268265_125970262	3300028380	Switchgrass Rhizosphere	HVLTCRFLVQEGVVDQARFTAYLETAMTEMAPGIEDQRTLFSLRQLIQALRTPLTKKDVQ
Ga0247828_111695121	3300028587	Soil	VQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0307297_100226401	3300028754	Soil	SSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0307288_101862331	3300028778	Soil	ILTCRFLVQEGVVDQDRFSVYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0307306_100733293	3300028782	Soil	VQEGMIDKDRFAAYLETAMTEMAPGIEDQRTLFSLRQLIQAVRAPITSKGVQ
Ga0307281_102800932	3300028803	Soil	RFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0307312_103229141	3300028828	Soil	LVQEGMVDKDRFAAYLETAMTEMAPGIEDQRTLFSLRQLIQAVRAPITSKGVQ
Ga0307312_107102961	3300028828	Soil	RFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0307289_101375213	3300028875	Soil	LTCRFLVQEGVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ
Ga0307304_101225071	3300028885	Soil	GVVDQDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTPKPVQ
Ga0318534_103085981	3300031544	Soil	AYLEAAMAEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ
Ga0318538_103865982	3300031546	Soil	LETAMAEMAPGIEDKRALFGLRQLITALRAPPTSTPVQ
Ga0318515_100656303	3300031572	Soil	AYLEAAMAEMAPGIEDKRTLFGLRQLTTALRAPPASTAVQ
Ga0318542_106119131	3300031668	Soil	FLACHVLTCRFLVQEGVVEKDRFTAYLEAAIAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0318560_103096881	3300031682	Soil	AYLETAMAEMAPGIEDKRALFGLRQLITALRAPPTSTPVQ
Ga0306917_113770922	3300031719	Soil	CHVLTCRFLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASTAV
Ga0318546_103062682	3300031771	Soil	VLTCRFLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0318552_106389932	3300031782	Soil	VQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAVQ
Ga0318576_105163582	3300031796	Soil	VDKDRFTAYLETAMAEMAPGIEDKRTLFGLRQLIAALRAPPASTAVQ
Ga0310917_111223632	3300031833	Soil	LACHVLTCRFLVQEGVVDKDRFTAYLETAMAEMAPGIEDKRALFGLRQLITALRAPPASTAMQ
Ga0318511_100142721	3300031845	Soil	FLVQEGVVEKDRFTAYLEAAIAEMAPGIEDKRTLFGLRQLITALRAPPASTAVQ
Ga0318536_103740542	3300031893	Soil	FLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASSAVQ
Ga0306922_123465402	3300032001	Soil	EKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASSAVQ
Ga0318569_100447331	3300032010	Soil	LVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASSAVQ
Ga0318569_101266081	3300032010	Soil	YLETAMAEMAPGIEDKRALFGLRQLITALRAPPTSTPVQ
Ga0318524_100617783	3300032067	Soil	AYLEAAMTEMAPGIEDKRTLFSLRQLIAALRAPPASTAVQ
Ga0306920_1021968871	3300032261	Soil	LACHVLTCRFLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFSLRQLITALRAPPASSAVQ
Ga0310914_105492151	3300033289	Soil	CHVLTCRFLVQEGVVEKDRFTAYLEAAMAEMAPGIEDKRTLFGLRQLITALRAPPASSAV
Ga0310810_100507641	3300033412	Soil	ETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0247829_113682921	3300033550	Soil	GVVDQDRFSAYLETAMAEMAPGIEDKRTLFSLRQLITALRAPLPSKAVQ
Ga0364933_119325_535_672	3300034150	Sediment	QDRFSSYLETAMAEMAPGIEDKRTLFSLRQLITALRAPVTSKPVQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069213

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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