NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069081

Metagenome / Metatranscriptome Family F069081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069081
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 94 residues
Representative Sequence MSLTKTIHSRSNKNIGEIIEERWEITAKTVIAEPQAGDPRRGVPPRFGIYEYEVKATVEQAPAKPTGGKRKQSEPSVGGTRREASSVPLTVRRLS
Number of Associated Samples 101
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.46 %
% of genes near scaffold ends (potentially truncated) 38.71 %
% of genes from short scaffolds (< 2000 bps) 89.52 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.065 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.000 % of family members)
Environment Ontology (ENVO) Unclassified
(33.065 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.839 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 24.39%    Coil/Unstructured: 75.61%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF13620CarboxypepD_reg 8.06
PF07228SpoIIE 7.26
PF13472Lipase_GDSL_2 2.42
PF00986DNA_gyraseB_C 2.42
PF01717Meth_synt_2 1.61
PF08327AHSA1 1.61
PF00106adh_short 0.81
PF00120Gln-synt_C 0.81
PF01804Penicil_amidase 0.81
PF07635PSCyt1 0.81
PF13432TPR_16 0.81
PF00793DAHP_synth_1 0.81
PF00535Glycos_transf_2 0.81
PF02698DUF218 0.81
PF13414TPR_11 0.81
PF05988DUF899 0.81
PF02594DUF167 0.81
PF07589PEP-CTERM 0.81
PF02452PemK_toxin 0.81
PF08002DUF1697 0.81
PF02735Ku 0.81
PF13424TPR_12 0.81
PF01176eIF-1a 0.81
PF04221RelB 0.81
PF06739SBBP 0.81
PF00487FA_desaturase 0.81
PF03960ArsC 0.81
PF14224DUF4331 0.81
PF12867DinB_2 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0187DNA gyrase/topoisomerase IV, subunit BReplication, recombination and repair [L] 2.42
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 1.61
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.81
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.81
COG1393Arsenate reductase or related protein, glutaredoxin familyInorganic ion transport and metabolism [P] 0.81
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.81
COG1434Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 familyCell wall/membrane/envelope biogenesis [M] 0.81
COG1872Uncharacterized conserved protein YggU, UPF0235/DUF167 familyFunction unknown [S] 0.81
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.81
COG2366Acyl-homoserine lactone (AHL) acylase PvdQSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG2949Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycinCell wall/membrane/envelope biogenesis [M] 0.81
COG3077Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin moduleDefense mechanisms [V] 0.81
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.81
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 0.81
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.06 %
UnclassifiedrootN/A41.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004100|Ga0058904_1415927Not Available579Open in IMG/M
3300004120|Ga0058901_1323265All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium603Open in IMG/M
3300004463|Ga0063356_100164818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2553Open in IMG/M
3300004631|Ga0058899_12162663All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005166|Ga0066674_10246813All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300005179|Ga0066684_10484962All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300005187|Ga0066675_10487813Not Available920Open in IMG/M
3300005289|Ga0065704_10702843All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005294|Ga0065705_10320474All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300005332|Ga0066388_103934348Not Available758Open in IMG/M
3300005434|Ga0070709_10253913All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1268Open in IMG/M
3300005446|Ga0066686_10927578Not Available570Open in IMG/M
3300005450|Ga0066682_10509795All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300005456|Ga0070678_102329981Not Available508Open in IMG/M
3300005529|Ga0070741_10597274All Organisms → cellular organisms → Bacteria → Acidobacteria986Open in IMG/M
3300005534|Ga0070735_10064931All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2367Open in IMG/M
3300005534|Ga0070735_10388621All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005542|Ga0070732_10945378All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300005544|Ga0070686_101836557Not Available516Open in IMG/M
3300005556|Ga0066707_10225830All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300005558|Ga0066698_10951091Not Available548Open in IMG/M
3300005576|Ga0066708_10823886Not Available581Open in IMG/M
3300005586|Ga0066691_10774308All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300005607|Ga0070740_10308355Not Available631Open in IMG/M
3300005952|Ga0080026_10103199Not Available796Open in IMG/M
3300006102|Ga0075015_100793665All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium568Open in IMG/M
3300006176|Ga0070765_101177490All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae724Open in IMG/M
3300006796|Ga0066665_11305192Not Available557Open in IMG/M
3300006797|Ga0066659_11801489All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia518Open in IMG/M
3300006845|Ga0075421_101665384All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300006880|Ga0075429_100037242All Organisms → cellular organisms → Bacteria4235Open in IMG/M
3300009012|Ga0066710_100978817All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300009012|Ga0066710_102141279Not Available820Open in IMG/M
3300009088|Ga0099830_10883973Not Available739Open in IMG/M
3300009089|Ga0099828_11558959All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300009090|Ga0099827_10397832All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300009090|Ga0099827_11455846All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300009098|Ga0105245_13092472Not Available516Open in IMG/M
3300009101|Ga0105247_11797835Not Available510Open in IMG/M
3300009137|Ga0066709_101023801All Organisms → cellular organisms → Bacteria → Acidobacteria1210Open in IMG/M
3300009137|Ga0066709_103653218Not Available558Open in IMG/M
3300010047|Ga0126382_11394015Not Available639Open in IMG/M
3300010154|Ga0127503_11031543Not Available552Open in IMG/M
3300010379|Ga0136449_100113420All Organisms → cellular organisms → Bacteria5488Open in IMG/M
3300010397|Ga0134124_10340629All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1410Open in IMG/M
3300010400|Ga0134122_11654676Not Available666Open in IMG/M
3300010403|Ga0134123_11620576Not Available695Open in IMG/M
3300011120|Ga0150983_10142010All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300011120|Ga0150983_11442813All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300011120|Ga0150983_11629126Not Available505Open in IMG/M
3300011120|Ga0150983_12656768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia527Open in IMG/M
3300011120|Ga0150983_15002505Not Available591Open in IMG/M
3300011120|Ga0150983_15028365Not Available515Open in IMG/M
3300011120|Ga0150983_15589325Not Available661Open in IMG/M
3300011120|Ga0150983_16332470Not Available536Open in IMG/M
3300011269|Ga0137392_11386203All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300012096|Ga0137389_10456968Not Available1094Open in IMG/M
3300012189|Ga0137388_11161981Not Available709Open in IMG/M
3300012189|Ga0137388_11729400Not Available559Open in IMG/M
3300012199|Ga0137383_11272441Not Available526Open in IMG/M
3300012200|Ga0137382_10514318All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300012202|Ga0137363_10117067All Organisms → cellular organisms → Bacteria2050Open in IMG/M
3300012202|Ga0137363_10136212All Organisms → cellular organisms → Bacteria → Acidobacteria1914Open in IMG/M
3300012204|Ga0137374_11265502Not Available511Open in IMG/M
3300012205|Ga0137362_10345961All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1287Open in IMG/M
3300012206|Ga0137380_10764388All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300012207|Ga0137381_10332362All Organisms → cellular organisms → Bacteria → Acidobacteria1324Open in IMG/M
3300012210|Ga0137378_10332697All Organisms → cellular organisms → Bacteria → Acidobacteria1412Open in IMG/M
3300012212|Ga0150985_121688009Not Available694Open in IMG/M
3300012356|Ga0137371_11052686Not Available614Open in IMG/M
3300012359|Ga0137385_11543179Not Available528Open in IMG/M
3300012361|Ga0137360_11165860Not Available666Open in IMG/M
3300012361|Ga0137360_11627053Not Available551Open in IMG/M
3300012362|Ga0137361_11705389Not Available549Open in IMG/M
3300012362|Ga0137361_11879202Not Available516Open in IMG/M
3300012363|Ga0137390_10507855Not Available1179Open in IMG/M
3300012922|Ga0137394_11485986Not Available537Open in IMG/M
3300012923|Ga0137359_10296147All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300012923|Ga0137359_10982991Not Available725Open in IMG/M
3300012930|Ga0137407_10442009All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300012930|Ga0137407_12258278Not Available520Open in IMG/M
3300012948|Ga0126375_10063093All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA32040Open in IMG/M
3300012960|Ga0164301_10812530Not Available716Open in IMG/M
3300012976|Ga0134076_10490874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300013306|Ga0163162_11721127Not Available716Open in IMG/M
3300014501|Ga0182024_10010286All Organisms → cellular organisms → Bacteria → Acidobacteria19090Open in IMG/M
3300014501|Ga0182024_10562228Not Available1436Open in IMG/M
3300016750|Ga0181505_10187342Not Available683Open in IMG/M
3300018468|Ga0066662_11456131All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300019256|Ga0181508_1314375All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300019789|Ga0137408_1380102All Organisms → cellular organisms → Bacteria → Acidobacteria1789Open in IMG/M
3300020579|Ga0210407_10492412All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300021088|Ga0210404_10178149All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1130Open in IMG/M
3300021168|Ga0210406_10469368All Organisms → cellular organisms → Bacteria → Acidobacteria999Open in IMG/M
3300021168|Ga0210406_10531581All Organisms → cellular organisms → Bacteria → Acidobacteria926Open in IMG/M
3300021170|Ga0210400_10706131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium829Open in IMG/M
3300021171|Ga0210405_10424026All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300021432|Ga0210384_10224244All Organisms → cellular organisms → Bacteria → Acidobacteria1691Open in IMG/M
3300021478|Ga0210402_10572408All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300021479|Ga0210410_11152908Not Available666Open in IMG/M
3300021559|Ga0210409_10962836All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300021559|Ga0210409_11209132All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300022532|Ga0242655_10240416Not Available569Open in IMG/M
3300026555|Ga0179593_1015847All Organisms → cellular organisms → Bacteria4116Open in IMG/M
3300027565|Ga0209219_1014713All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1863Open in IMG/M
3300027905|Ga0209415_10676009All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300027909|Ga0209382_11418701All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300027986|Ga0209168_10055698All Organisms → cellular organisms → Bacteria2104Open in IMG/M
3300028906|Ga0308309_11813236Not Available516Open in IMG/M
3300029701|Ga0222748_1072391Not Available629Open in IMG/M
3300031234|Ga0302325_13262061Not Available516Open in IMG/M
3300031236|Ga0302324_100969683All Organisms → cellular organisms → Bacteria → Acidobacteria1160Open in IMG/M
3300031740|Ga0307468_100667211All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300032160|Ga0311301_10184250All Organisms → cellular organisms → Bacteria3637Open in IMG/M
3300032180|Ga0307471_102272993Not Available684Open in IMG/M
3300032515|Ga0348332_10436776All Organisms → cellular organisms → Bacteria → Acidobacteria801Open in IMG/M
3300032515|Ga0348332_10763833All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300032515|Ga0348332_10968171All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1267Open in IMG/M
3300032782|Ga0335082_10088843All Organisms → cellular organisms → Bacteria3089Open in IMG/M
3300032783|Ga0335079_10708427All Organisms → cellular organisms → Bacteria → Acidobacteria1051Open in IMG/M
3300032893|Ga0335069_11686086All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300033004|Ga0335084_11102744All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300033412|Ga0310810_10098186All Organisms → cellular organisms → Bacteria3495Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.48%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.03%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.23%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.42%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.42%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.61%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.61%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004100Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019256Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058904_141592723300004100Forest SoilMSLTKTIRSRSNKNIGDVIEESWEITARTVIAEPDPGDRYRGVPPRLGIYEYEAKALVQQAPTKPASAKRGRIEPDAGGTRREASTVPLTVRRSG*
Ga0058901_132326523300004120Forest SoilRVRKDDRDHLKMSLTKTIRSRSNKNIGDTIEETWEITARTVIAEPDPGDRYRGVPPRLGIYEYEAKALVQQAPTKPAGKRGRIDPDAGGTRREASSVPLTVRR*
Ga0063356_10016481843300004463Arabidopsis Thaliana RhizosphereSFTKSIRSRSNKNIGDTIEENWEILAKTVIAEPQAGNPSRGVPPRFGIYEYEVKPLPQQIAPKPVAARRKQSEPSVGGTRREASSVALTVRRRT*
Ga0058899_1216266313300004631Forest SoilSRVRKDDRDHLKMSLTKTIRSRSNKNIGDTIEETWEITARTVIAEPDPGDRYRGVPPRLGIYEYEAKALVQQAPTKPAGKRGRIDPDAGGTRREASSVPLTVRR*
Ga0066674_1024681313300005166SoilMALMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQSGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0066684_1048496223300005179SoilMVTATALSKTIHSRSNKNIGDVIEERWEITGKTIIAEPQAGDPRRGVPPRFGIYEYEVKAIPTQAPTIPAGGGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0066675_1048781323300005187SoilMSLDKTIRSRSNKNIGDVIEERWEITARTVIAEPQSGDPRRGVPPRLGIYEYEVKPIVQPVSTKPTGGKRRQNEPGVGGTRREASSVPLTVRRIS*
Ga0065704_1070284323300005289Switchgrass RhizosphereMSLTKTIHSRSNKNIGDVIEERWEITAKTVIAEPQVGDPRRGVPPRFGIYEYDVKEIIQQAPAKPAGGKRKPNVPSV
Ga0065705_1032047423300005294Switchgrass RhizosphereMSLTKTIHSRSNKNIGDVIEERWEITAKTVIAEPQVGDPRRGVPPRFGIYEYDVKEIIQQAPAKPAGGKRKPNVPSVGGTRREASSVPLTVRRLS*
Ga0066388_10393434823300005332Tropical Forest SoilMSLTKTIHSRSNKNIGDVIEEKWEITARKVIAEPQAGDRYRGVPPRLGIYEYEVKLIPPASPAISPGRKRRQTEPSVGGTRREAGSVPLTVRRIS*
Ga0070709_1025391313300005434Corn, Switchgrass And Miscanthus RhizosphereMTATKMSLTKTIHSRSNKNIGDVIEERWEITARTVIAEPQSGDPQRGVPPRFGIYEYEVKALPTAAPTTPAGGKRKQHEPSVGGTRREASSVPVTVRRLS*
Ga0066686_1092757813300005446SoilTIHSRSNKNIGDIIEEKWEITARKVIAEPQPGDRYRGVPPRLGIYEYEVKMMPQVSQATPAGRKRRQTEPSVGGTRREASSVPLTVRRIS*
Ga0066682_1050979513300005450SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0070678_10232998113300005456Miscanthus RhizosphereMSLYQNIRSRSNKNIGDIIEEKWEITAKMVIAEPQAGDPRRGVPPRLGIYEYEVKPTVQHVPAKNTSEKRKKTEPSVGGTRREASTVPLTIRRLS*
Ga0070741_1059727423300005529Surface SoilMSSYKTVRSRSNKNIGDMIEGTWEIVGKTVVAEPFPGDRARGVAPRLGIYDYEVKPAVQQAPETPARSKRKQKEQDFGGTRREASSVALTVRR*
Ga0070735_1006493113300005534Surface SoilMSFDKTIRSRSNKNVGDIIEEKWEITAKTVIAEPQPGNPHWGVAPRLGIYEYEVKPTVQSVAPTRSSSPKPKQRESDMGGTRREASAVPLTVRRIS*
Ga0070735_1038862123300005534Surface SoilMTLEKTIRSRSNKNIGDVIEERWEITAKTEIAPPQAGDPRHGVPPRCGIYEYEVKTIVQQEPPAKAVGPKRKPPEPSVGGTRREASTVPLTVRRLS*
Ga0070732_1094537823300005542Surface SoilNKLTQHMSLNKTVRSRSNKNIGEIIEEKWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVVAEPAPRKRKQADPDVGGTRREASSVPLTVRR*
Ga0070686_10183655713300005544Switchgrass RhizosphereMSQYQNIRSRSNKNIGDIIEEKWEITAKMVIAEPQAGDPRRGVPPRLGIYEYEVKPTVQHVPTKNTSEKRKKTEPSVGGTRREASSVPLTIRRLS*
Ga0066707_1022583023300005556SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIADPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0066698_1095109113300005558SoilMSLNKTIHSRSNKNFGDIIEENWEIMAKTVIAEPQSGDPSRGVPPRLGIYEYEVKPIPQQAASKPTVGKRRQNEPSVGGTRREASSVPLTVRRLS*
Ga0066708_1082388613300005576SoilMSFNKTVRSRANKNIGDLIEERFEITGKTVIADPQAGDPRRGVAPRFGIYEYDVKPIVQQAPAKAPAAAKRKASEPSVGGTRREASTVPLTVRRFS*
Ga0066691_1077430823300005586SoilATPKSAPALVEWRLMSFTKTIRSRSNKNIGDMIEEQWEITARTVIDEPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0070740_1030835523300005607Surface SoilGDIIEGTWEIVGKTVVAEPFAGDRARGVAPRLGIYDYEVKPAVQHLAETPSRSKRKAKEKEQDFGGTRRDASSVALTVRR*
Ga0080026_1010319913300005952Permafrost SoilMSLQKTIHSRSNKNIGDVIEENWEITSKTVIAEPQAGDQRRGIAPRFGIYEYEVKPIPTRLPVKAAAERKRSEPSVGGTRREASSAPLIVRRLN*
Ga0075015_10079366513300006102WatershedsMSLTKTIHSRSNKNVGDVIEETWEITARTVIAEPQAGDPRRGVPPRFGIYEYEVKAIPMAAPTAPAAGKRKQQEPSVGGTRREASTV
Ga0070765_10117749023300006176SoilMTLEKSIRSRSNKNIGDVIEERWEITGKTVIAPPQAGDPPRGVPPRFGIYEYEVKPIVQHVPEKAAGPKRRPTERSVGGTRREASTVPLTVRRLS*
Ga0066665_1130519223300006796SoilMSLNKTIHSRSNKNIGDVIEEKWEITARKVIAEPQVGDRYRGVPPRLGIYEYEVKMIPQASPASPAGRKRKQTEPSVGGTRREASSVPLTVRRIS*
Ga0066659_1180148913300006797SoilIEEKWEITAKTVIAAPQAGDPYRGVAPRLGIYEYDVKPIVSDEPVKTAGAKRKQSEPSVGGTRREASAVPLTVRRLG*
Ga0075421_10166538423300006845Populus RhizosphereMSLNKTIHSRSNKNIGDIIEENWEITAKAVIAEPQTGDPRRGIPPRLGIYEYEVKSIVQQMPTRQPTGGKRKQSEPSVGGTRREASSVPLTVRRFS*
Ga0075429_10003724223300006880Populus RhizosphereMSLNKTIHSRSNKNIGDIIEENWEITAKAVIAEPQTGDPRRGIPPRLGIYEYEVKSIVQQMPTRQPTGGKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0066710_10097881723300009012Grasslands SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR
Ga0066710_10214127923300009012Grasslands SoilMSLNKTIHSRSNKNFGDIIEENWEIMAKTVIAEPQSGDPSRGVPPRLGIYEYEVKPIPQQAASKPTVGKRRQNEPSVGGTRREASSVPLTVRRLS
Ga0099830_1088397313300009088Vadose Zone SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQTGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQAQPSVGGTRREASS
Ga0099828_1155895923300009089Vadose Zone SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYDYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0099827_1039783223300009090Vadose Zone SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIADPQAGDPRHGVPPRFGIYEYQVKPIVQPASAEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0099827_1145584613300009090Vadose Zone SoilKWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIIQQVQAELPARKRKQTDPDAGGTRREASSVPLTVRR*
Ga0105245_1309247213300009098Miscanthus RhizosphereRANKNIGDIIEERWEITGKTVIAEPQAGDPRHGIAPRFGIYDYEVKALVQQSPAKAPAAAKRKPSEPSVGGTRREASTVGLTVRRFS*
Ga0105247_1179783513300009101Switchgrass RhizosphereMSQYQNIRSRSNKNIGDIIEEKWEITAKMVIAEPQAGDPRRGVPPRLGIYEYEVKPTVQHVPTKNTSEKRKKTEPSVGGTRREASSVPLTI
Ga0066709_10102380113300009137Grasslands SoilKSIHSRSNKNIGDIIEEKWQITARKVIAEPQAGDRYRGVPPRLGIYEYEVKMIPQASPSTPAGRKRKQSEPSVGGTRREASSVPLTVRRIS*
Ga0066709_10365321813300009137Grasslands SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIADPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLS*
Ga0126382_1139401513300010047Tropical Forest SoilMSLTKTIHSRSNKNIGDVIEEKWEITARKVIAEPQAGDRYRGVPPRLGIYEYEVKMIPQAPPATSAGRKRRQTEPSVGGTRREASSVPLTVRRIS*
Ga0127503_1103154313300010154SoilPKMSLNKTIHSRSNKNIGDVIEVSWEITAKAVIAEPQSGDPQRGVPPRFGIYEYEVKAIPSMAPPTPTAGKRKQNEPSVGGTRREASSVPLTVRRMS*
Ga0136449_10011342053300010379Peatlands SoilMSSNKTVRSRSNKNIGEIIEEQWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVPAEPAARKRKQTDPDVGGTRREASSVPLTVRR*
Ga0134124_1034062923300010397Terrestrial SoilMSLYQNIRSRSNKNIGDIIEEKWEITAKMVIAEPQAGDPRRGVPPRLGIYEYEVKPTVQHVPAKNTSEKRKKTEPSVGGTRREASSVPLTIRRLS*
Ga0134122_1165467613300010400Terrestrial SoilKNIGDVIEERWEITSKTVIAEPQVGDPRRGVPPRFGIYEYEVKAIVQLAPEKPAGGKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0134123_1162057613300010403Terrestrial SoilMSLTKSIHSRSNKNIGDVIEERWEITSKTVIAEPQVGDPRRGVPPRFGIYEYEVKAIVHLAPEKPAGGKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0150983_1014201023300011120Forest SoilSRSNKNIGEIIEEKWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVVAEPPARKRKQTDPDVGGTRREASSVPLTVRR*
Ga0150983_1144281313300011120Forest SoilMVTAPQMTSHLNKTIHSRSNKNIGDVIEERWEITGKTVIAEPQPGDPRRGVPPRFGIYEYEVKAIPTRAPTAPAGGGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0150983_1162912613300011120Forest SoilRPKMSLNKTIHSRSNKNIGDLIEERWEITAKTVIAEPQSGDPQRGVPPRFGIYEYEVKAIPQAAPTTPSGGKRKQHEPSVGGTRREASEVPLTVRRMS*
Ga0150983_1265676813300011120Forest SoilQKMSLNKTIHSRSNKNIGDVIEEKWEITAKTIIAAPQAGDPYRGVAPRLGIYEYDVKPIVSDEPVKTTVGKRKQSEPSVGGTRREASAVPLTVRRMG*
Ga0150983_1500250513300011120Forest SoilATKMSLNKTIHSRSNKNVGDVIEERWEITARTVIAEPQSGDPQRGVPPRFGIYEYEVKALPTAAPTTPASGKRKQHEPSVGGTRREASSVPITVRRLS*
Ga0150983_1502836513300011120Forest SoilRATMSLNLTKTIHSRSNKNIGDVIEERWEITARTVIAEPQPGDPRRGVPPRFGIYEYEVKAIPTLAPIALTGGKRKQSEPSVGGTRREASTVPLTVRRLS*
Ga0150983_1558932513300011120Forest SoilAPKMSLNKTIHSRSNKNIGDLIEERWEITAKTVIAEPQSGDPQRGVPPRFGIYEYEVKAIPQAAPTAPSGGKRKPSEPSVGGTRREASSVPLTVRRMS*
Ga0150983_1633247013300011120Forest SoilMSLTKTIRSRSNKNIGDVIEESWEITARTVIAEPDPGDRYHGVPPRLGIYEYEAKALVQQVPTKPAGKRGRVDPDAGGTRREASSVPITVRRLG*
Ga0137392_1138620323300011269Vadose Zone SoilMSLTKTIRSRSNKNIGDVIEESWEITARTVIAEPDPGDRYRGVPPRLGIYEYEAKALVQQTPTKPAGKRARIEPGAGGTRREASSVPITVRRLG*
Ga0137389_1045696823300012096Vadose Zone SoilMVTAPQMSLSKTIHSRSNKNIGDVIEERWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137388_1116198113300012189Vadose Zone SoilQMSLSKTIHSRSNKNIGDVIEESWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137388_1172940023300012189Vadose Zone SoilYAADAGVVIMKRTVLVEWEYAPMSLNKTIHSRSNKNIGDVIEEKWESTAKKVIAEPQSGDRYRGVPPRLGIYEYEVKMIPQPAPTTLTGQKRRRNEPSVGGTRREASSVPLTVRRFS*
Ga0137383_1127244113300012199Vadose Zone SoilMSLNKTIRSRSNKNFGDIIEENWEIITKTVIAEPQSGNPSRGVPPRLGIYEYEVKPIVQQVATKSPVGKRRQNEPSVGGTRREASSVPLTVRRIS*
Ga0137382_1051431813300012200Vadose Zone SoilIHSRSNKNIGDVIEERWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137363_1011706723300012202Vadose Zone SoilMSLHNTIRSRSNKNIGDMIEEKWEITAKTVIAEPQSGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0137363_1013621233300012202Vadose Zone SoilMVTAPQISLSKTIHSRSNKNIGDVIEERWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137374_1126550213300012204Vadose Zone SoilMSLTKTIHSRSNKNIGEIIEERWEITAKTVIAEPQAGDPRRGVPPRFGIYEYEVKATVEQAPAKPTGGKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0137362_1034596123300012205Vadose Zone SoilMVTAPQMSLSKTIHSRSNKNIGDVIEERWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPAGSGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137380_1076438813300012206Vadose Zone SoilMSLNKTIRSRSNKNVGAIIEENWEIMAKTVIAEPQSGDPPRGVPPRLGIYEYEVKPIAQQSARKPSVGKRRQNEPGVGGTRREASSVPLTVRRIS*
Ga0137381_1033236213300012207Vadose Zone SoilTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYDYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR*
Ga0137378_1033269743300012210Vadose Zone SoilSNKNIGDIIEEKWEITARKVIAEPQPGDRYRGVPPRLGIYEYEVKMIPQASPATPAGRKRRQTEPSVGGTRREASSVPLTVRRLS*
Ga0150985_12168800913300012212Avena Fatua RhizosphereNKNLGDIIEEKWEIIGKTVIAEPQAGDPRRGVAPRFGIYDYDVKPIVQQSPAKTPAPARRKPSEPSAGGTRREASTVGLTVRRFS*
Ga0137371_1105268613300012356Vadose Zone SoilGDVIEERWEITARTVIAEPQSGDPRRGVPPRLGIYEYEVKMMPQVSQATPAGRKRRQTEPSVGGTRREASSVPLTVRRIS*
Ga0137385_1154317913300012359Vadose Zone SoilMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYEYEVKLIPQAAPATAAGRKRRQSEPSVGGTRREASSVPLTVRRLSR*
Ga0137360_1116586023300012361Vadose Zone SoilMSLDKTIHSRSNKNIGDVIEEKWEITARKVIAEPQAGDRYRGVPPRLGIYEYEVKLIPQAAPATAPGRKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0137360_1162705313300012361Vadose Zone SoilIRSRSNKNIGDIIEEKWEITAKTVIAEPQSGDPRRGVPPRLGIYEYEVKPTVQHVPIKTTGEKRKRTEPSVGGTRREASTVPLTIRRLS*
Ga0137361_1170538913300012362Vadose Zone SoilKMSLNKTIHSRSNKNFGDIIEENWEIMAKTVIAEPQSGDPSRGVPPRLGIYEYEVKPIPQQAASKPTVGKRRQNEPTVGGTRREASSVPLTVRRIS*
Ga0137361_1187920223300012362Vadose Zone SoilHSRSNKNIGDVIEEKWEITARKVIAEPQAGDRYRGVPPRLGIYEYEVKLIPQAAPATAPGRKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0137390_1050785513300012363Vadose Zone SoilMKRALLVEWGYAPMSLNKTIHSRSNKNIGDVIEESWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS*
Ga0137394_1148598623300012922Vadose Zone SoilSNKNIGDVIEEKWEITARKVIAEPQSGDRYRGVPPRLGIYEYEVKMIPQAAPAPAAGRRRKQNEPSVGGTRREASSVPLTVRRLS*
Ga0137359_1029614723300012923Vadose Zone SoilMTLNKTIRSRSNKNVGDMIEERWEITAKRVIAEPQTGDPRRGVPPRFGIYDYEVKPIVQPVSTEPAAVKRKPSEPSVGGTRREASTVPLTVRRFS*
Ga0137359_1098299123300012923Vadose Zone SoilRSEARRFVHAADALVVMMERAMLVEWEYAPMSLNKTIHSRSNKNIGDVIEEKWEITSRKVIAEPQAGDRYRGVPPRLGIYEYEVKLIPQAAAATAAVKKRRPSEPSVGGTRREASSVPLTVRRLS*
Ga0137407_1044200923300012930Vadose Zone SoilMSLSKTIHSRSNKNAGDVIEGKWEITAKTVIAEPQPGDRNRGIPPRLGIYEYEVKPIPQQVAAKPAGGKRKQREPSVGGTRREASSVHLTLRRLS*
Ga0137407_1225827813300012930Vadose Zone SoilMSLNKTIHSRSNKNFGDIIEENWEIMAKTVIAEPQSGDPSRGVPPRLGIYEYEVKPIPQQAASKPTVGKRRQNEPSV
Ga0126375_1006309333300012948Tropical Forest SoilMSLTKTIHSRSNKNIGEVIEEKWEITARRVIAEPQAGDRYRGVPPRLGIYEYEVKMIPQAAPATAAGSKKRRPNEPNVGGTRREASEVPLTVRRLS*
Ga0164301_1081253013300012960SoilMSLYQNIRSRSNKNIGDIIEEKWEITAKMVIAEPQAGDPRRGVPPRLGIYEYEVKPTVQHVPAKSTSEKRKKTEPSVGGTRREASTVPLTIRRLS*
Ga0134076_1049087423300012976Grasslands SoilMSLNKTIRSRSNKNVGAIIEENWEIMAKTVIAEPQSGDPPRGVPPRLGIYEYEVKPIAHQSARKPSVGKRRQNEPGVGGTRREASSVP
Ga0163162_1172112723300013306Switchgrass RhizosphereMSLTKSIHSRSNKNIGDVIEERWEITSKTVIAEPQVGDPRRGVPPRFGIYEYEVKAIVQLAPEKPAGGKRKQSEPSVGGTRREASSVPLTVR
Ga0182024_1001028623300014501PermafrostMSLNKIVRSRSNKNIGDIIEDKWEITAKTVIAEPFAGDPRRGVPPRLGIYDYEVKPLLQQLSAEPATRKRKPNQADAGGTRREASTVPLTVRR*
Ga0182024_1056222813300014501PermafrostMSLEKNIHSRSNKNIGDVIEENWEITAKTVIAEPQPGDPRQGVPPRFGIYAYEVKAIPQRLPTKPVVAKRKQSEPSVGGTRREASSVPLTVRRLS*
Ga0181505_1018734213300016750PeatlandVSSTKTIHSRSNKNVGDTIEEKWEIIAKTVIAEPLPGDRKLDIPPRLGIYDYEVKPIVSAAPAKATSAKRQHEASVGGTRREASSVPLTVRRIS
Ga0066662_1145613123300018468Grasslands SoilLMSFTKTIRSRSNKNIGDMIEEQWEITARTVIAEPQAGDPRHGVPPRFGIYEYQVKPIVQPASTEPVRERRKQTQPSVGGTRREASSVPLTVRRLSR
Ga0181508_131437513300019256PeatlandGEIIEEHWEITAKRVIAEPQPADRDRNIPARLGIYEYEVKPAAQRVPSKASGARRQNEPSVGGTRREASSVPLTVRRKS
Ga0137408_138010223300019789Vadose Zone SoilMKRALLLEWGYAHNESNQNHPQPTNKNIGNVIEEKWEITARKVIAEPQPGDRYRGVPPRLGIYEYEVKLIPQAAPAAPAGKKRKQTEPSVGGTRREASSVPLTVRRIS
Ga0210407_1049241213300020579SoilMTATKMSLNKTIHSRSNKNVGDVIEERWEITARTVIAEPQSGDPQRGVPPRFGIYEYEVKALPTAAPTTPASGKRKQHEPSVGGTRREASSVPITVRRLS
Ga0210404_1017814923300021088SoilMVTAPQMSLSKTIHSRSNKNIGDVIEESWEITGKTVIAEPQSGDPRRGVPPRFGIYEYEVKAIPTQAPTTPTVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0210406_1046936813300021168SoilNVGDIIEETWEITGKTVIAEPQPGDPRRGVPPRFGIYEYEVKAIPTQAPTAPAVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0210406_1053158123300021168SoilMSLTKTIHSRSNKNVGDIIEERWEITGKTVIAEPQTGDPRRGVPPRFGIYEYEVKAIPTQAPTTPAVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0210400_1070613123300021170SoilMSLNKTIHSRSNKNIGDVIEEKWEITAKTVIAAPQAGDPYRGVAPRLGIYEYDVKPIVSDEPVKTAGAKRKQSEPSVGGTRREASSVPLTVRRMG
Ga0210405_1042402613300021171SoilMSSDKTIRSRSNKNIGDVIEERWEITDKTVIAEPQSGDPRRGVPPRLGIYEYGVKPIPQKVSTNPPGRKSRQNEPSVGGTRREASSVPLTVRRIS
Ga0210384_1022424423300021432SoilMSLSKTIHSRSNKNVGDVIEESWEITGKTVIAEPQPGDPRRGVPPRFGIYEYEVKAIPTLAPTTPAVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0210402_1057240823300021478SoilMNLSKTIRSRSNKNVGDTIEEKWEIIAKIVLAEPQPADRIKNIPPRLGIYDYEVKPILSRAAMATGPKHERSVGGTRREASSVPLTVRRIS
Ga0210410_1115290823300021479SoilMVTAPQMSLTKTIHSRSNKNVGDIIEERWEITGKTVIAEPQTGDPRRGVPPRFGIYEYEVKAIPTQAPTTPAVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0210409_1096283613300021559SoilNIGDVIEERWEITDKTVIAEPQSGDPRRGVPPRLGIYEYGVKPIPQKVSTNPPGRKSRQNEPSVGGTRREASSVPLTVRRIS
Ga0210409_1120913213300021559SoilMSSNKTVRSRSNKNIGEIIEEKWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIIQQVVAEPPARKRKQTDPDVGGTRREASSVPLTVRR
Ga0242655_1024041623300022532SoilMSLNKTIHSRSNKNIGDLIEERWEITAKTVIAEPQSGDPQRGVPPRFGIYEYEVKAIPQAAPTTPSGGKRKQHEPSVGGTRREASEVPLTVRRMS
Ga0179593_101584753300026555Vadose Zone SoilMTATKMSLNKTIHSRSNKNIGDVIEERWEITARTVIAEPQSGDPQRGVPPRFGIYEYEVKALPIAAPTSPTGGKRKQHEPSVGGTRREASSVPITVRRLS
Ga0209219_101471333300027565Forest SoilMSSTKTVRSRSNKNIGEIIEEKWEITAKTVIAEPYAGDRYRGIAPRLGIYDYEVKPIIQQLVAEPPARKRKQTDPDVGGTRREASSVPLTVRR
Ga0209415_1067600913300027905Peatlands SoilMSSNKTVRSRSNKNIGEIIEEQWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVPAEPAARKRKQTDPDVGGTRREASSVPLTVRR
Ga0209382_1141870123300027909Populus RhizosphereMSLNKTIHSRSNKNIGDIIEENWEITAKAVIAEPQTGDPRRGIPPRLGIYEYEVKSIVQQMPTRQPTGGKRKQSEPSVGGTRREASSVPLTVRRFS
Ga0209168_1005569823300027986Surface SoilMSFDKTIRSRSNKNVGDIIEEKWEITAKTVIAEPQPGNPHWGVAPRLGIYEYEVKPTVQSVAPTRSSSPKPKQRESDMGGTRREASAVPLTVRRIS
Ga0308309_1181323623300028906SoilMSSDKTIRSRSNKNIGDVIEERWEITDKTVIAEPQSGDPRRGVPPRLGIYEYGVKPIPQKVSTNPPGRKSRQNEPSVGGTRREASSVPLTRRVS
Ga0222748_107239123300029701SoilVTSNKTIHSRSNKNIGDLIEERWEITAKTVIAEPQSGDPQQGVPPRFGIYEYEVKAIPQAAPTAPSGAKRKQSEPSVGGTRREASTVPLTVRRMS
Ga0302325_1326206123300031234PalsaNKNLGDVIEERWEITGKTVIAEPQAGDPRHGVPPRFGIYEYEVKPIVQQAPPAKAAGPKRKPPEPSVGGTRREASTVPLTVRRLS
Ga0302324_10096968323300031236PalsaMTLENTIHSRSNKNIGDIIEEKWEITGKTVIAEPQPGDPRRGVPPRFGIYEYAVKPTVHRLPTKPAGAKRKPPQPSTGGTRREASSVSLTVRRLS
Ga0307468_10066721123300031740Hardwood Forest SoilMSLTKTIRSRSNKNIGDVIEESWEITARTVIAEPDPGDRYRGVPPRLGIYEYEAKALVQQVPVKAASKRAARSEPDAGGTRREASSVPITVRRLG
Ga0311301_1018425053300032160Peatlands SoilIEEQWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVPAEPAARKRKQTDPDVGGTRREASSVPLTVRR
Ga0311301_1306658513300032160Peatlands SoilSKTVIAEPYVGDRYRGDPPRLGIYEYEVKAIAEAAPIKATGGKRAPSEPSVGGTRREASSVPLTVRRVS
Ga0307471_10227299323300032180Hardwood Forest SoilMSLSKTIHSRSNKNIGDIIEERWEITGKTVIAEPQPGDPRRGVPPRFGIYEYEVKAIPTQAPTAPAVGKRKQKEPSVGGTRREASTVPLTVRRLS
Ga0348332_1043677623300032515Plant LitterMTLDKTIRSRANKNIGDVIEERWEITAKTEIAPPQAGDPRRGVPPRFGIYEYEVKPIVQQESVKAASPKRKPPEPSVGGTRREASTVPL
Ga0348332_1076383313300032515Plant LitterLNKTVRSRSNKNIGEIIEEKWEITAKTVIAEPFAGDRYRGIAPRLGIYDYEVKPIVQQVPAEPAARKRKQVDPDAGGTRREASSVPLTVRR
Ga0348332_1096817123300032515Plant LitterMTLEKTIRSRSNKNIGDVIEERWEITGKTVIADPQAGDPRHGVPPRFGFYEYDVKPIVQQAPPAKAAGPKRKPPEPSVGGTRREASTVPLTVRRLS
Ga0335082_1008884323300032782SoilMQIQMSLNRTVRSRANKSIGEIIEDKWEITGKTVIAEPFAGDRYRGVAPRLGIYDYEVKPIVQQATKEEPASRKRKPAEPNVGGTRREASTVSLTVRR
Ga0335079_1070842723300032783SoilMSFEKTVRSRSNKNVGDIIEDKWEITAKTVIAEPTAGNPQRGVAPRLGIYEYEVKPAVMAAPARSSAAPRPKQRESDLGGTRREASAIPLTVRRIS
Ga0335069_1168608623300032893SoilMSINRTVRSRANKNIGEIIEEKWEIIGKTVIAEPFAGDRYRGIAPRLGIYDYEVKPTVQQVKAEPAPRKRKPAEPNVGGTRREASTVALTVRR
Ga0335084_1110274413300033004SoilEDKWEITGKTVIAEPFAGDRYRGVAPRLGIYDYEVKPIVQQATKEEPASRKRKPAEPNVGGTRREASTVSLTVRR
Ga0310810_1009818633300033412SoilMSFTKSIRSRSNKNIGDTIEENWEILAKTVIAEPQAGNPSRGVPPRFGIYEYEVKPLPQQIAPKPVAARRKQSEPSVGGTRREASSVALTVRRRT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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