Metagenome / Metatranscriptome Family F069080

Basic Information
Family ID	F069080
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	43 residues
Representative Sequence	AEVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKQVASAAA
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.03 %
% of genes near scaffold ends (potentially truncated)	89.52 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (72.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.161 % of family members)
Environment Ontology (ENVO)	Unclassified (22.581 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.516 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 13.89% Coil/Unstructured: 52.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02391	MoaE	31.45
PF03454	MoeA_C	4.84
PF02597	ThiS	4.84
PF01063	Aminotran_4	4.03
PF04209	HgmA_C	3.23
PF08241	Methyltransf_11	3.23
PF07889	DUF1664	1.61
PF04909	Amidohydro_2	1.61
PF00072	Response_reg	0.81
PF10805	DUF2730	0.81
PF13011	LZ_Tnp_IS481	0.81
PF13545	HTH_Crp_2	0.81
PF06296	RelE	0.81
PF04773	FecR	0.81
PF08459	UvrC_RNaseH_dom	0.81
PF13550	Phage-tail_3	0.81
PF00809	Pterin_bind	0.81
PF13560	HTH_31	0.81
PF01066	CDP-OH_P_transf	0.81
PF13683	rve_3	0.81
PF13711	DUF4160	0.81
PF01934	HepT-like	0.81
PF13374	TPR_10	0.81
PF01266	DAO	0.81
PF13419	HAD_2	0.81
PF08897	DUF1841	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	31.45
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	8.06
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	4.84
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	4.84
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	4.84
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.23
COG0322	Excinuclease UvrABC, nuclease subunit	Replication, recombination and repair [L]	0.81
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.81
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.81
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.81
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.81
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.81
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.58 %
Unclassified	root	N/A	26.61 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.23 %
Unclassified	root	N/A	26.61 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	47.58 %
Unclassified	root	N/A	26.61 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	24.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.26 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	3.23 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	3.23 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.81 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.81 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
Leotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
Helotiales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
Lachnaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Lachnaceae	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.26 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.03 %
Enhydrobacter aerosaccus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	3.23 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.23 %
Lachnellula	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Lachnaceae → Lachnellula	0.81 %
Roseomonas arctica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	0.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10221816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300004080\|Ga0062385_10619422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300004080\|Ga0062385_10898254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300004082\|Ga0062384_100623943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300004082\|Ga0062384_100769346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	670	Open in IMG/M
3300004091\|Ga0062387_101251491	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005167\|Ga0066672_10854037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300005363\|Ga0008090_14071048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300005438\|Ga0070701_11215902	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005468\|Ga0070707_102204020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300005540\|Ga0066697_10279216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	986	Open in IMG/M
3300005554\|Ga0066661_10213602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1195	Open in IMG/M
3300005555\|Ga0066692_10970093	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005557\|Ga0066704_10275993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1140	Open in IMG/M
3300005558\|Ga0066698_10321618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1071	Open in IMG/M
3300005559\|Ga0066700_10818688	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005574\|Ga0066694_10560892	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300005587\|Ga0066654_10932852	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005598\|Ga0066706_11171068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300005610\|Ga0070763_10217386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1025	Open in IMG/M
3300005713\|Ga0066905_101056360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	719	Open in IMG/M
3300006176\|Ga0070765_101223247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	709	Open in IMG/M
3300006796\|Ga0066665_10163452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1699	Open in IMG/M
3300006800\|Ga0066660_11374193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300007258\|Ga0099793_10671796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300009012\|Ga0066710_100075803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4348	Open in IMG/M
3300009101\|Ga0105247_10153574	Not Available	1519	Open in IMG/M
3300010039\|Ga0126309_10663325	Not Available	665	Open in IMG/M
3300010043\|Ga0126380_11150326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	665	Open in IMG/M
3300010043\|Ga0126380_11939940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300010046\|Ga0126384_12180421	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010048\|Ga0126373_10297994	Not Available	1607	Open in IMG/M
3300010048\|Ga0126373_11857603	Not Available	666	Open in IMG/M
3300010048\|Ga0126373_12822675	Not Available	542	Open in IMG/M
3300010335\|Ga0134063_10620674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300010366\|Ga0126379_11565078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300010376\|Ga0126381_101594831	Not Available	943	Open in IMG/M
3300010376\|Ga0126381_104062369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	569	Open in IMG/M
3300010379\|Ga0136449_100017306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	18807	Open in IMG/M
3300010379\|Ga0136449_103894802	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Lachnaceae → Lachnellula	560	Open in IMG/M
3300010400\|Ga0134122_12515417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300010400\|Ga0134122_13143022	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010401\|Ga0134121_12644011	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300011269\|Ga0137392_11554074	Not Available	520	Open in IMG/M
3300011270\|Ga0137391_10352093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300011270\|Ga0137391_10624194	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300011999\|Ga0120148_1005997	All Organisms → cellular organisms → Bacteria → Proteobacteria	3307	Open in IMG/M
3300012205\|Ga0137362_10740003	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300012208\|Ga0137376_11229069	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012212\|Ga0150985_109943354	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012212\|Ga0150985_110410880	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012285\|Ga0137370_10608834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300012363\|Ga0137390_10627464	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300012363\|Ga0137390_11714735	Not Available	562	Open in IMG/M
3300012469\|Ga0150984_120449753	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012923\|Ga0137359_10429972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1169	Open in IMG/M
3300012930\|Ga0137407_11727567	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012971\|Ga0126369_10683973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1102	Open in IMG/M
3300012975\|Ga0134110_10038848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	1870	Open in IMG/M
3300012989\|Ga0164305_10925921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	734	Open in IMG/M
3300012989\|Ga0164305_12220868	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300013503\|Ga0120127_10023870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	1105	Open in IMG/M
3300013764\|Ga0120111_1028108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus	1522	Open in IMG/M
3300014501\|Ga0182024_10096309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4331	Open in IMG/M
3300014968\|Ga0157379_11815968	Not Available	599	Open in IMG/M
3300015242\|Ga0137412_10503416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	927	Open in IMG/M
3300015371\|Ga0132258_12310552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1348	Open in IMG/M
3300016270\|Ga0182036_10280858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1258	Open in IMG/M
3300016270\|Ga0182036_10847041	Not Available	747	Open in IMG/M
3300016371\|Ga0182034_11346487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300016387\|Ga0182040_10187928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1508	Open in IMG/M
3300016404\|Ga0182037_10198432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1555	Open in IMG/M
3300017973\|Ga0187780_10772159	Not Available	695	Open in IMG/M
3300017995\|Ga0187816_10518403	Not Available	538	Open in IMG/M
3300018058\|Ga0187766_11004812	Not Available	594	Open in IMG/M
3300021178\|Ga0210408_11127437	Not Available	602	Open in IMG/M
3300021407\|Ga0210383_11145613	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300021432\|Ga0210384_10580799	Not Available	1008	Open in IMG/M
3300021559\|Ga0210409_11385319	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300021560\|Ga0126371_10674409	Not Available	1182	Open in IMG/M
3300021560\|Ga0126371_13808861	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300022498\|Ga0242644_1035821	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300022532\|Ga0242655_10056075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas arctica	985	Open in IMG/M
3300022713\|Ga0242677_1054918	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300022726\|Ga0242654_10225803	Not Available	661	Open in IMG/M
3300022726\|Ga0242654_10310233	Not Available	583	Open in IMG/M
3300025915\|Ga0207693_11089717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300025929\|Ga0207664_11860046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300025939\|Ga0207665_10467726	Not Available	970	Open in IMG/M
3300026550\|Ga0209474_10138309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1597	Open in IMG/M
3300027546\|Ga0208984_1086419	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300027603\|Ga0209331_1037630	Not Available	1237	Open in IMG/M
3300027662\|Ga0208565_1044535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1446	Open in IMG/M
3300027824\|Ga0209040_10132108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1370	Open in IMG/M
3300030399\|Ga0311353_10187075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1954	Open in IMG/M
3300030730\|Ga0307482_1291319	Not Available	523	Open in IMG/M
3300031231\|Ga0170824_107358288	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031545\|Ga0318541_10025381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2885	Open in IMG/M
3300031546\|Ga0318538_10008781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4088	Open in IMG/M
3300031546\|Ga0318538_10087619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1590	Open in IMG/M
3300031640\|Ga0318555_10005863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5068	Open in IMG/M
3300031640\|Ga0318555_10146179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1264	Open in IMG/M
3300031708\|Ga0310686_110135223	Not Available	1039	Open in IMG/M
3300031719\|Ga0306917_10545572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300031719\|Ga0306917_10916644	Not Available	685	Open in IMG/M
3300031771\|Ga0318546_11042044	Not Available	575	Open in IMG/M
3300031792\|Ga0318529_10267031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	797	Open in IMG/M
3300031797\|Ga0318550_10465930	Not Available	610	Open in IMG/M
3300031798\|Ga0318523_10389630	Not Available	693	Open in IMG/M
3300031835\|Ga0318517_10009541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3429	Open in IMG/M
3300031879\|Ga0306919_11039635	Not Available	626	Open in IMG/M
3300031896\|Ga0318551_10069328	Not Available	1823	Open in IMG/M
3300031941\|Ga0310912_10126112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1911	Open in IMG/M
3300031945\|Ga0310913_10013873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4896	Open in IMG/M
3300031946\|Ga0310910_10929900	Not Available	681	Open in IMG/M
3300031954\|Ga0306926_11079963	Not Available	950	Open in IMG/M
3300031954\|Ga0306926_12681960	Not Available	541	Open in IMG/M
3300031954\|Ga0306926_12829630	Not Available	523	Open in IMG/M
3300031959\|Ga0318530_10215338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	789	Open in IMG/M
3300032039\|Ga0318559_10167601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1002	Open in IMG/M
3300032076\|Ga0306924_12026974	Not Available	592	Open in IMG/M
3300032515\|Ga0348332_13738783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300032954\|Ga0335083_10863744	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300033004\|Ga0335084_11633365	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.16%
Host-Associated	Host-Associated	4.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.71%
Aquatic	Environmental → Aquatic	6.45%
Plants	Host-Associated → Plants	4.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.10%
Freshwater	Environmental → Aquatic → Freshwater	6.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.42%
Peat	Environmental → Terrestrial → Peat	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.00%
Loam	Environmental → Terrestrial → Soil → Loam	8.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069080

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_102218161	3300004080	Bog Forest Soil	TGSAAEVTPVGEIAGEGGHHRFTPGAICRLMWEDFDRTVGKQVATAA*
Ga0062385_106194221	3300004080	Bog Forest Soil	VGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKQVASAAA*
Ga0062385_108982543	3300004080	Bog Forest Soil	AEVTPVGEIIGEHGHYRFTPSTICRLMWEDYDRKVGKQVASAA*
Ga0062384_1006239431	3300004082	Bog Forest Soil	AEVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKQVASAAA*
Ga0062384_1007693463	3300004082	Bog Forest Soil	TPVGEIIGEHGHYRFTPSTICRLMWEDYDRKVGKQVASAA*
Ga0062387_1012514911	3300004091	Bog Forest Soil	VGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKTVAASAA*
Ga0066672_108540371	3300005167	Soil	VTPVGEIIGEIGHYRFTPGTICRLMWEDYDRAVGKNVAATAA*
Ga0008090_140710481	3300005363	Tropical Rainforest Soil	MQARARGVGGQVTPVGEIIGAVGHYRFTPGTIRRLMREDYDRLVGKKVE
Ga0070701_112159021	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EVTPVGEIIGDVGHYRFTPSTICRLMWEDYDRAVGKQDATSAAAE*
Ga0070707_1022040202	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AAEVTPVGEIIGEIGHYRFTPGTICRLMWEDYDRAVGKNVAATAA*
Ga0066697_102792161	3300005540	Soil	AEVTPVGEIIGAVGHYRFTPGTICRLMWEDYDRLVGKRVAATAA*
Ga0066661_102136024	3300005554	Soil	RPAHAGSAAEVTPVGEIVGSVGHYRFTPGTICRLMWEDYDRLVGKRVAATAA*
Ga0066692_109700931	3300005555	Soil	TPVGEVAGEVGHYRFTPGAICRLMWEDFDCTVGKQVATAA*
Ga0066704_102759931	3300005557	Soil	PVGEIIGEHGHYHFTPGTICRLVWEDYDRKVGKRVASAA*
Ga0066698_103216181	3300005558	Soil	LTGSAAEVTPVGEIIGEHGHYHFTPGTICRLVWEDYDRKVGKRVASAA*
Ga0066700_108186883	3300005559	Soil	AEVTPVGEIIGEIGHYRFTPGTICRLMWEDYDRAVGKNVAASAA*
Ga0066694_105608921	3300005574	Soil	SAAEVTPVGEIIGEHGHYRFTPGTICRLMWEDFDRTVGKQVATAAA*
Ga0066654_109328522	3300005587	Soil	AEITPVGEVEGAIGHYRFTPGAICQLMIEDYDVATGKNVKAAAAE*
Ga0066706_111710681	3300005598	Soil	LTGSAAEVTPVGEVAGEVGNYRFTPGAICRLMWEDFDRTVGKQVATAA*
Ga0070763_102173861	3300005610	Soil	TGSAAEVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRMVGKRVANAA*
Ga0066905_1010563602	3300005713	Tropical Forest Soil	MQARARGVGGQVTPVGEIIGAVGHCRFTPGTICRLMREDYDRLVGKKVAVTAA*
Ga0070765_1012232472	3300006176	Soil	EGAIGHYRFTPGAICHLMIEDYDQATGKNVKAAAAA*
Ga0066665_101634522	3300006796	Soil	LEAGEVGNYRFTPGAICRLTWEDFDCTVGKQVVTAA*
Ga0066660_113741932	3300006800	Soil	FLTGSAAEVTPVGEIIGAVGHYRFTPGTICRLMWEDDDRLVGKKVAATAA*
Ga0099793_106717962	3300007258	Vadose Zone Soil	EVTPVGEIIGEISHYRFTPGTICRLMWEDYDRAVGKNVAATAA*
Ga0066710_1000758037	3300009012	Grasslands Soil	LEAGEVGNYRFTPGAICRLTWEDFDCTVGKQVVTAA
Ga0105247_101535742	3300009101	Switchgrass Rhizosphere	EIIGDRGHYRFTPGTICRLMWEDYDRAVGKQEATSAAAE*
Ga0126309_106633252	3300010039	Serpentine Soil	EIIGKIGHYRFTPGAICRLMWEDYDRAVGKQVAATAA*
Ga0126380_111503262	3300010043	Tropical Forest Soil	AAEVTPVGEVIGEHGHYRFTPGTICRLMWEDYDRAVGKQVATAA*
Ga0126380_119399402	3300010043	Tropical Forest Soil	GEIIGAVGHCRFTPGTICRLMREDYDRLVGKKVAVTAA*
Ga0126384_121804212	3300010046	Tropical Forest Soil	GEIVGEHGNFKFTPATICRLMWEDYDRTVGKQVANAA*
Ga0126373_102979941	3300010048	Tropical Forest Soil	IGEHGHYRFTPGTICRLMWEDYDRTVGKQVANAA*
Ga0126373_118576031	3300010048	Tropical Forest Soil	TPVGEIDGAIGHYRFTPGAICKLMIEDYDRITGKTVDKAAAE*
Ga0126373_128226752	3300010048	Tropical Forest Soil	GEVVGKAGNFRFTPGAICRLMWEDFDRAVGKQVATAA*
Ga0134063_106206741	3300010335	Grasslands Soil	GSAAEVTPVGEIVGSVGHYRLTPGTICRLMWEDYDRLVGKKVAATAA*
Ga0126379_115650782	3300010366	Tropical Forest Soil	MQARARGVGGQVTPVGEIIGAVGHYRFTPGTICRLMREDYDRLVGKKVAVTAA*
Ga0126381_1015948314	3300010376	Tropical Forest Soil	GEIIGEHGHYHFTPGTICRLMWEDYDREVGKRVASAA*
Ga0126381_1040623693	3300010376	Tropical Forest Soil	SAAEVTPVGEVIGEHGHYRFTPGTICRLMWEDYDRTVGKQVANAA*
Ga0136449_10001730621	3300010379	Peatlands Soil	AAEITPVGEIHGAIGKYRFTPGAICRLMWEDYDRATGKAATAAAAE*
Ga0136449_1038948021	3300010379	Peatlands Soil	VTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKKVASAA*
Ga0134122_125154172	3300010400	Terrestrial Soil	FLTGSAAEVTPVGEIIGEHGHYHFTPGMICRLMWEDYDRMVGKRVASAA*
Ga0134122_131430221	3300010400	Terrestrial Soil	IVGQYGNYRFTPGRICRLMWEDYDRAVGKQLIAA*
Ga0134121_126440111	3300010401	Terrestrial Soil	EVTPVGEIVGQYGNYRFTPGRICRLMWEDYDRAVGKQLIAA*
Ga0137392_115540741	3300011269	Vadose Zone Soil	AEVTPVGEIIGEVGHYRFTPGALCRLMWEDFDRLVGKQVAATAA*
Ga0137391_103520933	3300011270	Vadose Zone Soil	TGSAAEVTPVGEIIGEVGHFRFTPGALCRLMWEDFDRLVGKQVAASAA*
Ga0137391_106241943	3300011270	Vadose Zone Soil	TGSAAEVTPVGEIIGEVGHFRFTPGALCRLMWEDFDRLVGKQVAATAA*
Ga0120148_10059972	3300011999	Permafrost	VTGGEIIGAVGHYRFTPGTICRLMWEDYDRTVGKQVAAAAE*
Ga0137362_107400033	3300012205	Vadose Zone Soil	TAEITPVGEIEGAIAHYRFTPGAICRLMNEDYDQATGKNVKAAAAA*
Ga0137376_112290693	3300012208	Vadose Zone Soil	GEIVGSVGHYRFTPGTICRLMWEDYDRLVGKRVAATAA*
Ga0150985_1099433542	3300012212	Avena Fatua Rhizosphere	VEGAIGHYRFTPGAICQLMIEDYDVATGKNVKAAAAE*
Ga0150985_1104108802	3300012212	Avena Fatua Rhizosphere	SAAEVTPVGEIVGQYGTYRFTPGRICRLMWEDYDRAVGKQLAAA*
Ga0137370_106088342	3300012285	Vadose Zone Soil	IIGTGGHYRFTPGTICRLMWEDYDRLVGKKVAATAA*
Ga0137390_106274641	3300012363	Vadose Zone Soil	AAEVTPVGEIIGEVGHFRFTPGALCRLMWEDFDRLVGKQVAATAA*
Ga0137390_117147351	3300012363	Vadose Zone Soil	GEVIGQIGHYRFAPGTICRLMWEDYDRAVGKQVASAA*
Ga0150984_1204497531	3300012469	Avena Fatua Rhizosphere	TPVGEIVGQYGTYRFTPGRICRLMWEDYDRAVGKQLAAA*
Ga0137359_104299721	3300012923	Vadose Zone Soil	TGSAAEVTPVGEIIGEIGHYRFTPGTICRLMWEDYDRTVGKQIASAA*
Ga0137407_117275672	3300012930	Vadose Zone Soil	VAGEVGNYRFTPGAICRLMWEDFDRTVGKQVATAA*
Ga0126369_106839733	3300012971	Tropical Forest Soil	MQARARGVGGQVTPVGEIIGAVGHYRFTPGTICRLMREDYDRLVGKKVAATAA*
Ga0134110_100388483	3300012975	Grasslands Soil	VTPVGEIVGSVGHYRFTPGTICRLMWEDYDRLVGKRVAATAA*
Ga0164305_109259212	3300012989	Soil	VTPVGEIVESAGHYRFTPGTICRLMWEDYDRLVGKRVAATAA*
Ga0164305_122208681	3300012989	Soil	AEVTPVGEIIGEHGHYRFMPGTICRLMWEDYDRTVGKQVASAA*
Ga0120127_100238701	3300013503	Permafrost	VTVGEIIGAVGHYRFTPGTICRLMWEDYDRTVGKQLAAAAE*
Ga0120111_10281081	3300013764	Permafrost	VTVGEIIGAVGHYRFTPGTICRLMWEDYDRTVGKQVAAAAE*
Ga0182024_100963093	3300014501	Permafrost	MTPVGEIIGEVGHFCFTSVALCRLMWEDFDRLVWSPTPG*
Ga0157379_118159681	3300014968	Switchgrass Rhizosphere	TPVGEIIGEIGHYRFTPGTICRLMWEDYDRAVGKQEATSAAAE*
Ga0137412_105034163	3300015242	Vadose Zone Soil	GEIIGTGGHYRFTPGTICRLMWEDYDRLVGKKVAATAA*
Ga0132258_123105521	3300015371	Arabidopsis Rhizosphere	EIIAKHGHYRFTPSTICRLMWEDYDRAVGKRVASAA*
Ga0182036_102808584	3300016270	Soil	TPVGEIAGEVGNYRFTPGVICRLMSEDFDHIVGKKVATAA
Ga0182036_108470412	3300016270	Soil	TPVGEIVGKAGNFRFTPSAICRLMWEDFDRAVGKRVATAA
Ga0182034_113464872	3300016371	Soil	AAEVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKKVATASAA
Ga0182040_101879284	3300016387	Soil	EVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKKVATASAA
Ga0182037_101984321	3300016404	Soil	EVTPVGEIVGKVGNYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0187780_107721592	3300017973	Tropical Peatland	AEITPVGEIDGAIGRYRFTPGAICQLMIDDYDIATGKHAKAAAAE
Ga0187816_105184032	3300017995	Freshwater Sediment	EITPVGEIVGAIGHYRFTPSTVCRLMWEDYDRATGKKVDKAAAE
Ga0187766_110048121	3300018058	Tropical Peatland	EITPVGEIAGAIVHYRFTPGAICRLMIEDYDRATGKTATAAAAE
Ga0210408_111274371	3300021178	Soil	AEVTPVGEVIGEIGHYRFAPGTICRLMWEDYDRAVGKQVASAA
Ga0210383_111456131	3300021407	Soil	VTPVGEVIGEHGHYRFTPGTICRLMWEDYDRRVGKRVASAA
Ga0210384_105807991	3300021432	Soil	GSVAEVTPVGEIIGNIGHYRFTPGTICRLMWEDYDRLVGKKVAATAA
Ga0210409_113853192	3300021559	Soil	IIGEHGHYRFTPGTICRLMWEDYDRNVGKQVASAA
Ga0126371_106744094	3300021560	Tropical Forest Soil	VGEVIGEHGHYRFTPGTICRLMWEDYDRTVGKQVANAA
Ga0126371_138088611	3300021560	Tropical Forest Soil	EVTPVGEIIGEHGHYRFTPGTICRLMWEDYDREVGKRVANAA
Ga0242644_10358213	3300022498	Soil	SAAEVTPVGEIIGERGHYRFTPGTICRLMWEDYDRAVGKKVAATAA
Ga0242655_100560751	3300022532	Soil	EIIGERGHYRFTPGTICRLMWEDYDRAVGKKVAATAA
Ga0242677_10549181	3300022713	Soil	GEIIGERGHYRFTPGTICRLMWEDYDRAVGKKVAATAA
Ga0242654_102258032	3300022726	Soil	SAAEVTPVGEIVGEIGHYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0242654_103102331	3300022726	Soil	PVGEIIGEHGHYRFTPGTFCRLMWEDYDRMVGKRVASAA
Ga0207693_110897171	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SAAEVTPVGEIIGEGGHYRFTPGTICRLMWEDYDRAVGKKVAATAA
Ga0207664_118600462	3300025929	Agricultural Soil	AEVTPVGEIIGTVGHYRFTPGALCRLMWEDFDRLVGKQPASSAAA
Ga0207665_104677261	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AEVTPVGEIVGEGGDYRFTPGTICRLLWEDYDRLVGKRVAATAA
Ga0209474_101383092	3300026550	Soil	VTPVGEIIGSIGHYRFTPGTICRLMWEDYYRLVGKRVEATAA
Ga0208984_10864193	3300027546	Forest Soil	AEVTPVGEINGEGGHYRFTPGTICRLMWEDYDRLVGKKVAATAAA
Ga0209331_10376304	3300027603	Forest Soil	SAAEVTPVGEVAGEVGNYRFTPGAICRLMWEDFDRTVGKQVATAA
Ga0208565_10445354	3300027662	Peatlands Soil	TPVGEIHGAIGKYRFTPGAICRLMWEDYDRATGKAATAAAAE
Ga0209040_101321083	3300027824	Bog Forest Soil	SAAEVTPVGEIIGERGHYRFTPGTICRLMWEDYDHTVGKNVTAATAA
Ga0311353_101870754	3300030399	Palsa	TPVGEVSGHAGNFRFTPGAICRLMWEDFDRTVGKKVAAAAAAE
Ga0307482_12913191	3300030730	Hardwood Forest Soil	EIAGEVGDYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0170824_1073582883	3300031231	Forest Soil	VGEIAGEVGHYRFTPGTICRLMWEDFDRTVGKQVATAA
Ga0318541_100253816	3300031545	Soil	TPVGEIVGKVGNYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0318538_100087817	3300031546	Soil	TGSAAEVTPVGEIAGEVGHYRFTPGTICRLMSDDFDRAVGKQVATAA
Ga0318538_100876191	3300031546	Soil	VGEIAGEVGHHRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0318555_100058631	3300031640	Soil	EVTPVGEIAGEVGHYRFTPGTICRLMSDDFDRAVGKQVATAA
Ga0318555_101461791	3300031640	Soil	AEVTPVGEIAGEVGHYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0310686_1101352231	3300031708	Soil	EVTPVGEIDGAIGRYRFTPGAICRLMWEDYDRATGKKVDQAAASQAAE
Ga0306917_105455722	3300031719	Soil	SAAEVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRTVGKKVATASAA
Ga0306917_109166441	3300031719	Soil	VTPVGQIIGEIGHYRFTPGTICRLMWEDYDRAVGKQVASAA
Ga0318546_110420441	3300031771	Soil	TGSAAEVTPVGEIVGEVGHYRFTPGAFCRLMSDDFDRAVGKQVATAA
Ga0318529_102670313	3300031792	Soil	GSAAEVTPVGEIVGEVGHYRFTPGAFCRLMSDDFDRAVGKQVATAA
Ga0318550_104659301	3300031797	Soil	AAEVTPVGEIVGKVGNYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0318523_103896301	3300031798	Soil	VTPVGEIIGKVGNYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0318517_100095417	3300031835	Soil	TPVGEIAGEVGHYRFTPGTICRLMSDDFDRAVGKQVATAA
Ga0306919_110396352	3300031879	Soil	SAAEVTPVGEIAGKIGNYRFTPGAICRLMWEDFDHAVGKKVAIATEAPP
Ga0318551_100693281	3300031896	Soil	SAAEVTPVGEIAGEVGHYRFTPGAICRLMWEDFDRVVGKQVATAA
Ga0310912_101261124	3300031941	Soil	TPVGEIAGEVGHHRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0310913_100138737	3300031945	Soil	GSAAEVTPVGEIAGEVGHYRFTPGTICRLMSDDFDRAVGKQVATAA
Ga0310910_109299002	3300031946	Soil	AAEVTPVGEIIGKVGNYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0306926_110799634	3300031954	Soil	SAAEVTPVGEIVGKVGNFRFTPGAICRLIWEDFDRAVGKQVATAA
Ga0306926_126819601	3300031954	Soil	AAEITPVGQIDGAIGHYRFTPGALCQVMIEDYDSATGKHIKAAAAE
Ga0306926_128296302	3300031954	Soil	EVTPVGEIIGEHGHYRFTPGTICRLMWEDYDRKVGKQVASAA
Ga0318530_102153381	3300031959	Soil	PVGEIVGEVGHYRFTPGAFCRLMSDDFDRAVGKQVATAA
Ga0318559_101676014	3300032039	Soil	EVTPVGEIVGEVGHYRFTPGAICQLMWEDFDCAVGKQVAAA
Ga0306924_120269741	3300032076	Soil	TPVGEIVGEVGHYRFTPGAICRLMWEDFDRAVGKQVATAA
Ga0348332_137387833	3300032515	Plant Litter	LPRQAPVLTGSAAEITRIGEIIGESGHYRFTPGAMWEDYDRTIGKKIAATAA
Ga0335083_108637442	3300032954	Soil	EIDGAIGHYRFTPGTICRLMCEDYDRATGKTTNAAAAE
Ga0335084_116333651	3300033004	Soil	DGAIGRYRFTPSTICRLMWEDYDRATGKTANAAAAE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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