NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069059

Metagenome Family F069059

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069059
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 55 residues
Representative Sequence MAKRLSAPTMAVWLITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL
Number of Associated Samples 96
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.58 %
% of genes near scaffold ends (potentially truncated) 33.06 %
% of genes from short scaffolds (< 2000 bps) 89.52 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (70.968 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.484 % of family members)
Environment Ontology (ENVO) Unclassified
(30.645 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.710 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.43%    β-sheet: 0.00%    Coil/Unstructured: 50.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00171Aldedh 12.90
PF05726Pirin_C 4.03
PF01261AP_endonuc_2 4.03
PF00069Pkinase 3.23
PF00291PALP 3.23
PF04255DUF433 2.42
PF00486Trans_reg_C 2.42
PF03372Exo_endo_phos 2.42
PF00294PfkB 1.61
PF03825Nuc_H_symport 1.61
PF08450SGL 1.61
PF00083Sugar_tr 1.61
PF04365BrnT_toxin 0.81
PF00583Acetyltransf_1 0.81
PF00899ThiF 0.81
PF13354Beta-lactamase2 0.81
PF12770CHAT 0.81
PF13360PQQ_2 0.81
PF01341Glyco_hydro_6 0.81
PF00264Tyrosinase 0.81
PF00563EAL 0.81
PF00248Aldo_ket_red 0.81
PF00498FHA 0.81
PF12838Fer4_7 0.81
PF07883Cupin_2 0.81
PF07690MFS_1 0.81
PF01425Amidase 0.81
PF05685Uma2 0.81
PF13411MerR_1 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 12.90
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 12.90
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 12.90
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 12.90
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 4.03
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 2.42
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.61
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 1.61
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 1.61
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.81
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.81
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.81
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.81
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.81
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.81
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.81
COG5297Cellulase/cellobiase CelA1Carbohydrate transport and metabolism [G] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.97 %
UnclassifiedrootN/A29.03 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101247128Not Available510Open in IMG/M
3300000955|JGI1027J12803_103984157All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300004114|Ga0062593_101872098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300004114|Ga0062593_103277003All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300004156|Ga0062589_100308558All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300004156|Ga0062589_100890292Not Available818Open in IMG/M
3300004156|Ga0062589_101328812All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300004156|Ga0062589_102627623Not Available523Open in IMG/M
3300004463|Ga0063356_100576797All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300004463|Ga0063356_100960382All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300004463|Ga0063356_103183486All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300004480|Ga0062592_101079281All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria741Open in IMG/M
3300004480|Ga0062592_101615044All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhodonellum → Rhodonellum psychrophilum627Open in IMG/M
3300004480|Ga0062592_102396883Not Available529Open in IMG/M
3300004643|Ga0062591_101769752All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7629Open in IMG/M
3300005093|Ga0062594_103121110Not Available518Open in IMG/M
3300005174|Ga0066680_10073469All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300005187|Ga0066675_10573850All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300005328|Ga0070676_11376210All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005330|Ga0070690_100028183All Organisms → cellular organisms → Bacteria → Acidobacteria3478Open in IMG/M
3300005330|Ga0070690_100324359All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300005330|Ga0070690_101442250All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300005335|Ga0070666_10814985All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005341|Ga0070691_10837581All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005354|Ga0070675_101518075All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005354|Ga0070675_102191771All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005366|Ga0070659_100783869All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005367|Ga0070667_100249982All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300005406|Ga0070703_10193573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300005406|Ga0070703_10543954All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005441|Ga0070700_100779266Not Available768Open in IMG/M
3300005468|Ga0070707_101264033All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005471|Ga0070698_101410736All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005543|Ga0070672_100296610Not Available1369Open in IMG/M
3300005544|Ga0070686_100393804All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300005578|Ga0068854_101007284Not Available738Open in IMG/M
3300005616|Ga0068852_102325268Not Available557Open in IMG/M
3300005764|Ga0066903_101127256All Organisms → cellular organisms → Bacteria1449Open in IMG/M
3300005840|Ga0068870_10193659All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300005842|Ga0068858_100855967Not Available888Open in IMG/M
3300006038|Ga0075365_11140730Not Available549Open in IMG/M
3300006178|Ga0075367_10685556Not Available652Open in IMG/M
3300006852|Ga0075433_10029008All Organisms → cellular organisms → Bacteria4710Open in IMG/M
3300006881|Ga0068865_101191806Not Available674Open in IMG/M
3300006914|Ga0075436_101374106Not Available535Open in IMG/M
3300006969|Ga0075419_10287403All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300009089|Ga0099828_11012780Not Available740Open in IMG/M
3300009090|Ga0099827_10195920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1678Open in IMG/M
3300009094|Ga0111539_10000215All Organisms → cellular organisms → Bacteria69057Open in IMG/M
3300009094|Ga0111539_11375857All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300009094|Ga0111539_12052591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300009098|Ga0105245_10082111All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria2948Open in IMG/M
3300009100|Ga0075418_10066172All Organisms → cellular organisms → Bacteria3853Open in IMG/M
3300009100|Ga0075418_11548949Not Available720Open in IMG/M
3300009100|Ga0075418_13121788Not Available505Open in IMG/M
3300009147|Ga0114129_11181219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium954Open in IMG/M
3300009148|Ga0105243_10015657All Organisms → cellular organisms → Bacteria5733Open in IMG/M
3300009162|Ga0075423_10036221All Organisms → cellular organisms → Bacteria5024Open in IMG/M
3300009162|Ga0075423_11125168All Organisms → cellular organisms → Bacteria → Terrabacteria group837Open in IMG/M
3300009162|Ga0075423_11935275All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300009177|Ga0105248_11874057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300010403|Ga0134123_10268943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium1494Open in IMG/M
3300011119|Ga0105246_12081564All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300011421|Ga0137462_1085501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300011443|Ga0137457_1338812All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300012043|Ga0136631_10114939All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300012202|Ga0137363_11665587Not Available530Open in IMG/M
3300012212|Ga0150985_118377674Not Available981Open in IMG/M
3300012469|Ga0150984_114952594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300012530|Ga0136635_10086787All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300012895|Ga0157309_10225628All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7599Open in IMG/M
3300012907|Ga0157283_10378078Not Available519Open in IMG/M
3300012944|Ga0137410_11776674All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300013306|Ga0163162_11762325All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria708Open in IMG/M
3300015052|Ga0137411_1344352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2066Open in IMG/M
3300015245|Ga0137409_10234224All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1637Open in IMG/M
3300015373|Ga0132257_103159807Not Available600Open in IMG/M
3300017695|Ga0180121_10042268All Organisms → cellular organisms → Bacteria → Acidobacteria1608Open in IMG/M
3300017695|Ga0180121_10439871All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300017789|Ga0136617_10000700All Organisms → cellular organisms → Bacteria28864Open in IMG/M
3300017789|Ga0136617_10010879All Organisms → cellular organisms → Bacteria → Proteobacteria8115Open in IMG/M
3300017792|Ga0163161_11739884Not Available553Open in IMG/M
3300018063|Ga0184637_10084410All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales1950Open in IMG/M
3300018063|Ga0184637_10120689All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300018074|Ga0184640_10044660All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300018083|Ga0184628_10352571Not Available772Open in IMG/M
3300018429|Ga0190272_10195780All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1454Open in IMG/M
3300018429|Ga0190272_10223134All Organisms → cellular organisms → Bacteria → Proteobacteria1386Open in IMG/M
3300018429|Ga0190272_11994756All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300018429|Ga0190272_12456052All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300018468|Ga0066662_11152616Not Available780Open in IMG/M
3300018469|Ga0190270_10612656All Organisms → cellular organisms → Bacteria → Acidobacteria1063Open in IMG/M
3300018469|Ga0190270_11755340All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300018476|Ga0190274_11584446All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300018476|Ga0190274_11907320All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300018481|Ga0190271_12218744All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300018920|Ga0190273_12312054Not Available509Open in IMG/M
3300021082|Ga0210380_10118141All Organisms → cellular organisms → Bacteria → Acidobacteria1179Open in IMG/M
3300023263|Ga0247800_1132419Not Available527Open in IMG/M
3300025885|Ga0207653_10170306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium810Open in IMG/M
3300025885|Ga0207653_10435013All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300025899|Ga0207642_10040032Not Available2042Open in IMG/M
3300025901|Ga0207688_10474534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia782Open in IMG/M
3300025908|Ga0207643_10814194Not Available605Open in IMG/M
3300025911|Ga0207654_11395657Not Available511Open in IMG/M
3300025926|Ga0207659_10294459Not Available1331Open in IMG/M
3300025931|Ga0207644_10704814Not Available842Open in IMG/M
3300025936|Ga0207670_11653236All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300025961|Ga0207712_11459050All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria613Open in IMG/M
3300025981|Ga0207640_10356087All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300026035|Ga0207703_10779979Not Available912Open in IMG/M
3300026319|Ga0209647_1061810All Organisms → cellular organisms → Bacteria1944Open in IMG/M
3300027691|Ga0209485_1291676All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300027846|Ga0209180_10727944Not Available537Open in IMG/M
3300027882|Ga0209590_11014626Not Available517Open in IMG/M
3300028592|Ga0247822_11571427Not Available557Open in IMG/M
3300028799|Ga0307284_10222740All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300031562|Ga0310886_10892121All Organisms → cellular organisms → Bacteria → Proteobacteria565Open in IMG/M
3300031720|Ga0307469_12137467All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032211|Ga0310896_10043458Not Available1774Open in IMG/M
3300033815|Ga0364946_073723All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300034147|Ga0364925_0021025All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300034147|Ga0364925_0103340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1012Open in IMG/M
3300034165|Ga0364942_0122165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium846Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.48%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil8.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.45%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand4.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.03%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.23%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment3.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.42%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.42%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.81%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011421Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012043Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017789Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300023263Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10124712823300000364SoilMATRLSAPTRAVWLIALIVGAIGILNHMRVIHLRLGVEDFWLVA
JGI1027J12803_10398415723300000955SoilMAKRLSAPTMAVWVITLVVGGIGILNHLRVLHLRLGVEDFW
Ga0062593_10187209813300004114SoilMATRLSAPTMAVWLITLIAGGIGILNHLRVLHLRIGLDDFWLVAGSLILLLLANLMRGL*
Ga0062593_10327700313300004114SoilMANRLSAPTMAVWVITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLVANLLRGL*
Ga0062589_10030855823300004156SoilMATRLSAPTMAVWLISLVVGVVGILIHVGAVHLRLGIEDFWLVAGSLILLLVANLLRGL*
Ga0062589_10089029213300004156SoilMAKRLSAPTMAVWLITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0062589_10132881223300004156SoilMAVWLISLIVGVAGILIHIRAIHVQVGVEDFWLVAGSLILLLVANLLRGL*
Ga0062589_10262762323300004156SoilMATRMTAPTKAVWLISLIVGVIGILIHVRAINLRLGVDDFWLVAGSLILLLVASLMKGL*
Ga0063356_10057679723300004463Arabidopsis Thaliana RhizosphereMATRLSAPTMAVWLISLIVGVTGILIHVRAINLRLGVEDFWLVAGSLILLLVANLLRGL*
Ga0063356_10096038223300004463Arabidopsis Thaliana RhizosphereMATRLSAPTMAVWLIALIVGAVGIFNHLGVLHLRIGVEDFWLVAGSLILLLVANLLRGL*
Ga0063356_10318348613300004463Arabidopsis Thaliana RhizosphereMSTKLSAPTRAVWFIALIVGGAGILMHMRVINLRLGVEDFWLVAGSLILLLVANVMRGL*
Ga0062592_10107928113300004480SoilMATRLSAPTMAVWLISLVVGLVGILIHVGAVHLRLGVEDFWL
Ga0062592_10161504413300004480SoilMATRMTAPTKAVWLITLIVGVIGILNHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0062592_10239688323300004480SoilVWLISLIVGVIGILIHVRAINLRLGVDDFWLVAGSLILLLVASLMKGL*
Ga0062591_10176975223300004643SoilMAVWLISLVVGVVGILIHVGAVHLRLGIEDFWLVAGSLILLLVANLLRGL*
Ga0062594_10312111023300005093SoilMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMKGL*
Ga0066680_1007346933300005174SoilMAMRLSAPHKAVWLIALVVGAMGILMHMRVIHLRLGVEDFWLVAGSLILLLVATLFKGM*
Ga0066675_1057385023300005187SoilMATRLSAPTRAVWLITLVVGGIGILDHLRVIHLRLGIEDFWLVAGSLVLLLVANVMRGL*
Ga0070676_1137621023300005328Miscanthus RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVA
Ga0070690_10002818313300005330Switchgrass RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0070690_10032435923300005330Switchgrass RhizosphereMAKRLSAPTMAVWVITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0070690_10144225013300005330Switchgrass RhizosphereMAAWLIALVVGAIGILNHMRILHLRLGVEDFWLVAGSLILLLL
Ga0070666_1081498523300005335Switchgrass RhizosphereMAKRLSAPTMAVWVITLIVGGIGILNHLHVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0070691_1083758123300005341Corn, Switchgrass And Miscanthus RhizosphereMAKRLSAPTMAVWIITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLA
Ga0070675_10151807523300005354Miscanthus RhizosphereMAAWLISLVVGAIGILNHLRILHLRLGVEDFWLVAGSLILLLLANLM
Ga0070675_10219177113300005354Miscanthus RhizosphereMAKRLSAPTMAVWVITLVVGGIGILNHLRVLHLKLGVEDFWLVAGSLILLLLANLMRGL*
Ga0070659_10078386933300005366Corn RhizosphereMATRLSAPTMAAWLIALVVGAIGILNHMRILHLRLGVEDFWLVAG
Ga0070667_10024998233300005367Switchgrass RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVAT
Ga0070703_1019357323300005406Corn, Switchgrass And Miscanthus RhizosphereMVTYLIALVVGAIGILNHLGAIHLRLGVEDFWLVAGGFALLLLANLLKGL*
Ga0070703_1054395423300005406Corn, Switchgrass And Miscanthus RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLV
Ga0070700_10077926623300005441Corn, Switchgrass And Miscanthus RhizosphereMATRLSAPTMAAWLIALVVGAIGILNHMRILHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0070707_10126403313300005468Corn, Switchgrass And Miscanthus RhizosphereMVTYLIALVVGAIGILNHLGVIHLRLGVEDFWLVAGGFALLLLANLLKGL*
Ga0070698_10141073613300005471Corn, Switchgrass And Miscanthus RhizosphereMATRLSAPKMAVWLIALIVGMTGILMHLRAIHLRLGIEDFWLVAGSLL
Ga0070672_10029661013300005543Miscanthus RhizosphereSPAQQERRDPFAPHGGYMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0070686_10039380423300005544Switchgrass RhizosphereMAKRLSAPTMAVWVITLIVGGIGILNHLHVLHLRLGVEDFWLVAGSLILLLL
Ga0068854_10100728423300005578Corn RhizosphereMAKRLSAPTMAVWIITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0068852_10232526813300005616Corn RhizosphereAPHGGYMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0066903_10112725633300005764Tropical Forest SoilMRTTLSAPTRAVWLIALIVGGIGILMHMRVIHLRLGIEDFWLVAASLILLLVANLMRGL*
Ga0068870_1019365923300005840Miscanthus RhizosphereMATRLSAPTMAVWLITLIVGGVGILNHLRVLHLRLGVEDFWLVAGSLILLLIANLLKGL*
Ga0068858_10085596723300005842Switchgrass RhizosphereTMAVWVITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0075365_1114073023300006038Populus EndosphereMATRMTAPTKAVWLITLIVGVIGILNHVRVINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0075367_1068555623300006178Populus EndosphereMAKRLSAPTMAVWLITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLV
Ga0075433_1002900833300006852Populus RhizosphereMAKRLSAPTMAVWLITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLVLLLLANLMRGL*
Ga0068865_10119180613300006881Miscanthus RhizosphereGAIGILNHMRILHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0075436_10137410623300006914Populus RhizosphereMALRLSAPHRAVWLIALVVGAIGILIHLRTIHLRLGIEDFWLVAGSLILLLVATLMKGM*
Ga0075419_1028740323300006969Populus RhizosphereMATRLSAPTMAVWLIALIVGVTGILIHVRAINLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0099828_1101278013300009089Vadose Zone SoilMAMRLSAPHRAVWLIALIVGAMGILMHMRVIHLRLGVEDFWLVAGSLILLLVATLFKGM*
Ga0099827_1019592013300009090Vadose Zone SoilVFATLGGFMAMRLSAPHRAVWLIALIVGAMGILMHMRVIHLRLGIEDFWLVAGSLVLLLVATLFKGM*
Ga0111539_10000215123300009094Populus RhizosphereMAAWLIALVVGAIGILNHMRILHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0111539_1137585713300009094Populus RhizosphereMAVWLIALIVGAIGILNHLGILHLRLGIEDFWLVAGSLILLLVANLFRGL*
Ga0111539_1205259123300009094Populus RhizosphereMAVWLITLIAGGIGILNHLRVLHLRIGVEDFWLVAGSLILLLVANLMKGL*
Ga0105245_1008211123300009098Miscanthus RhizosphereMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMKGL*
Ga0075418_1006617263300009100Populus RhizosphereMTAPTKAVWLITLIVGVIGILNHVRVINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0075418_1154894913300009100Populus RhizosphereMATRLSAPKMAVWLIALIVGMTGILMHLRAIHLRLGIEDFWLVAGSLLLLLVANLVKGL*
Ga0075418_1312178823300009100Populus RhizosphereMVVWVISLVVGLTGILMHVRAIHLRLGVEDFWLVAGSLILLLAANLFKGM*
Ga0114129_1118121913300009147Populus RhizosphereGGYMATRMTAPTKAVWLITLIVGVIGILNHVRVINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0105243_1001565753300009148Miscanthus RhizosphereMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0075423_1003622163300009162Populus RhizosphereMAVWLITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLVLLLLANLMRGL*
Ga0075423_1112516813300009162Populus RhizosphereMAVWLIALVVGLTGILIHIRAVHLRLGVEDFWLVAGSLILLLVANLLKGL*
Ga0075423_1193527513300009162Populus RhizosphereMVTYLIALVVGAIGILNHLGAIHLRLGVEDFWLVAGSFALLLLANLLRGL*
Ga0105248_1187405713300009177Switchgrass RhizosphereMAVWVITLIVGGIGILNHLHVLHLRLGVEDFWLVAGSLILLLLANLMRGL*
Ga0134123_1026894313300010403Terrestrial SoilMIGLDTLEVAMATKLSAPTRAVWLVALIVGGVGILMHMRAIHLRLGVEDFWLVAGSLILLLVANAMRGL*
Ga0105246_1208156423300011119Miscanthus RhizosphereMAVWLITLIVGGVGILNHLRVLHLRLGVEDFWLVAGSLILLLIANLLKGL*
Ga0137462_108550113300011421SoilMAVWLIALIVGGIGILNHLGVLHLRLGVEDFWLVAGSLILLLVANLLRGL*
Ga0137457_133881213300011443SoilVWLIALIVGAIGILNHLAVLHLRLGVEDFWLVAGSLILLLVANLLRGL*
Ga0136631_1011493923300012043Polar Desert SandMAVWVIALIVGVTGILMHVRAINLRLGVEDFWLVAGSLILLLVANLLKGL*
Ga0137363_1166558713300012202Vadose Zone SoilMTRLSAPHKAVWLIALIVGAMGILMHMRVIHLRLGVEDFWLVAGSLILLLVATLFKGM*
Ga0150985_11837767413300012212Avena Fatua RhizosphereMAVWVITLVVGGIGILNHLRVLHLRVGVDDFWLVAGSLILLLLANLMRGL*
Ga0150984_11495259423300012469Avena Fatua RhizosphereMAKRLSAPTMAVWVITLVVGGIGILNHLRVLHLRVGVDDFWLVAGSLILLLLANLMRGL*
Ga0136635_1008678723300012530Polar Desert SandMAVWVIALIVGVMGILMHVRAINLRLGVEDFWLVAGSLILLLVANLLKGL*
Ga0157309_1022562823300012895SoilLVVGVVGILIHMGAVHLRLGIEDFWLVAGSLILLLVANLLRGL*
Ga0157283_1037807813300012907SoilMATRMTAPTKAVWLITLIVGVIGILNHVRAINMRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0137410_1177667413300012944Vadose Zone SoilMAVWLITLIVGGIGILNHVRVLHLRLGVEDFWLVAGSLVLLLLANLMRGL*
Ga0163162_1176232513300013306Switchgrass RhizosphereMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLL
Ga0137411_134435233300015052Vadose Zone SoilMAVWLIALIVGATGILMHLRAIHLRLGVEDFWLVAGSLILLLVANLVKGL*
Ga0137409_1023422423300015245Vadose Zone SoilMAVWLITLIVGGIGILNHVRVLHLRLGVEDFWLVAGSLILLLVANFVKGL*
Ga0132257_10315980713300015373Arabidopsis RhizosphereDPFAPHGGYMAPRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL*
Ga0180121_1004226823300017695Polar Desert SandMASRLSAPTMAVWVIALIVGVTGILMHVRAINLRLGVEDFWLVAGSLILLLVANLLKGL
Ga0180121_1043987113300017695Polar Desert SandMATTRLSAPTMAVWVIALLVGGVGILNHLGVLHLRIGVEDFWLVAGSLILLLVANLLKGL
Ga0136617_10000700203300017789Polar Desert SandMATRLSAPTMAVWVIALLVGGVGILNHLGILHLRIGVEDFWLVAGSLILLLLANLFRGL
Ga0136617_1001087923300017789Polar Desert SandMAVWVISLLVGVTGILMHIRAINLSLGIEAFWLVAASLILLLVANLIRGL
Ga0163161_1173988423300017792Switchgrass RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL
Ga0184637_1008441023300018063Groundwater SedimentMATRLSAPTMAVWLIALIVGATGILMHLRAIHLRLGVEDFWLVAVSLILLLVANLVKGL
Ga0184637_1012068933300018063Groundwater SedimentPCGRTLACAPRGGHMATKLSAPTMAVWLVALIVGATGILMHIRAINLRLGVEDFWLVAGSLLLLLVANLIKGL
Ga0184640_1004466023300018074Groundwater SedimentMATRLSAPTMAVWLIALIVGVTGILIHVRAINLRLGVEDFWLVAGSLILLLVANLLKGL
Ga0184628_1035257113300018083Groundwater SedimentIISLAVGAIGILNHLRILHLRLGVDDIWLVAGSLILLLLANLMRGL
Ga0190272_1019578043300018429SoilMAVWLISLIVGVTGILIHVRAINLRLGVEDFWLVAGSLILLLVANLLRGL
Ga0190272_1022313423300018429SoilMATRLSAPTMAVWLISLIVGLTGILIHVRAINLRLGVEDFWLVAGSLILLLVANLLRGL
Ga0190272_1199475623300018429SoilMATRLSAPTMAVWLISLIVGAVGILNHLGVLHLRLGIEDFWLVAASLILLLVANLLRGL
Ga0190272_1245605223300018429SoilAVWVIALLVGGVGILNHLNVLNLRIGVEDFWLVAGSLILLLLANLLRSL
Ga0066662_1115261613300018468Grasslands SoilMAMRLSAPHKAVWLIALIVGAMGVLMHMRVIHLRLGVEDFWLVAGS
Ga0190270_1061265623300018469SoilMATRLSAPTMAVWLIALIVGAIGILNHLGILHLRLGIQDFWLVAGSLILLLVANLLRGL
Ga0190270_1175534023300018469SoilALIVGAIGILNHLGILHLRLGIQDFWLVAGSLILLLVANLFRGL
Ga0190274_1158444623300018476SoilMAKRLSAPTMAVWVITLVVGGIGILNHLRVLHLKLGVEDFWLVAGSLILLLLANLMRGL
Ga0190274_1190732013300018476SoilMATRLSAPTMAVWLIALIVGAIGMLNHLGILHLRLGIEDFWLVAGSLILLLVANLFRGL
Ga0190271_1221874413300018481SoilMATRLSAPTMAVWLIALIVGAIGILNHLGILHLRLGIQDFWLVA
Ga0190273_1231205423300018920SoilMATTRLSAPTMAVWVISLAVGLTGILMHIRAINLSLGIEAFWLVASSLILLLVANLLRGL
Ga0210380_1011814113300021082Groundwater SedimentVATRLSAPTMAAWIISLAVGAIGILNHLRILHLRLGVDDIWLVAGGLILLLLANLMRGL
Ga0247800_113241913300023263SoilMATRMTAPTKAVWLITLIVGVIGILNHVRAINVRLGVDDFWLVAGSLILLLVATLMK
Ga0207653_1017030613300025885Corn, Switchgrass And Miscanthus RhizosphereMVTYLIALVVGAIGILNHLGAIHLRLGVEDFWLVAGGFALLLLANLLKGL
Ga0207653_1043501313300025885Corn, Switchgrass And Miscanthus RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMKG
Ga0207642_1004003223300025899Miscanthus RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMKGL
Ga0207688_1047453423300025901Corn, Switchgrass And Miscanthus RhizosphereMATRLSAPTMAAWLIALVVGAIGILNHMRILHLRLGVEDFWLVAGSLILLLLANLMRGL
Ga0207643_1081419423300025908Miscanthus RhizosphereMATRLSAPTMAVWLITLIVGGVGILNHLRVLHLRLGVEDFWLVAGSLILLLIANLLKGL
Ga0207654_1139565713300025911Corn RhizosphereQQERRDPFAPHGGYMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL
Ga0207659_1029445923300025926Miscanthus RhizosphereQQERRDPFAPHGGYMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMKGL
Ga0207644_1070481413300025931Switchgrass RhizosphereMATRLSAPTMAVWLITLVAGGIGILNHLRVLHLKVGVEDFWLVAGSLILLLLANLMRGL
Ga0207670_1165323613300025936Switchgrass RhizosphereMATRLSAPTMAVWLITLIAGGIGILNHLRVLHLRIGLDDFWLVAGSLILLLLANLMRGL
Ga0207712_1145905013300025961Switchgrass RhizosphereMATRMTAPTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVASLMK
Ga0207640_1035608733300025981Corn RhizosphereMAKRLSAPTMAVWIITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLVASLMKGL
Ga0207703_1077997923300026035Switchgrass RhizosphereAPTMAVWVITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL
Ga0209647_106181023300026319Grasslands SoilMATRLSAPKMAVWLIALIVGATGILMHLRTIHLQLGVEDFWLVAGSLILLLVANFVKGL
Ga0209485_129167613300027691Agricultural SoilSFMATRLSAPTMAVWVIALLVGTVGILNHINVLNLRIGVEDFWLVAGSLILLLVANLFRG
Ga0209180_1072794423300027846Vadose Zone SoilMAMRLSAPHKGVWLIALIVGAMGILMHMRVIHLRLGVEDFWLVA
Ga0209590_1101462613300027882Vadose Zone SoilMAMRLSAPHRAVWLIALIVGAMGILMHMRVIHLRLGIEDFWLVAGSLILLLVATLFK
Ga0247822_1157142723300028592SoilMATRMTAPTKAVWLITLIVGVIGILNHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL
Ga0307284_1022274023300028799SoilMAKRLSAPTMAVWLITLVVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL
Ga0310886_1089212123300031562SoilMAVWLISLIVGVAGILIHIRAIHVQVGVEDFWLVAGSLILLLVANLLRGL
Ga0307469_1213746713300031720Hardwood Forest SoilMAKRLSAPTMAVWLITLIVGGIGILNHLRVLHLRLGVEDFWLVAGSLILLLLANLMRGL
Ga0310896_1004345813300032211SoilTKAVWLISLIVGVIGILIHVRAINVRLGVDDFWLVAGSLILLLVATLMKGL
Ga0364946_073723_243_3953300033815SedimentMAVWLVALIVGATGILMHIRAINLRLGVEDFWLVAGSLLLLLVANLIKGL
Ga0364925_0021025_1951_20763300034147SedimentMAVWLIALIVGATGILMHLRAIDLRLGVEDFWLVAGSLVLLL
Ga0364925_0103340_825_9773300034147SedimentMAVWLIALIVGATGILMHLRAIDLRLGVEDFWLVAGSLVLLLVANLVKGL
Ga0364942_0122165_2_1363300034165SedimentALIVGATGILMHMRAINLRLGVEDFWLVAGSLLLLLVANLIKGL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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