Metagenome / Metatranscriptome Family F069018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	77 residues
Representative Sequence	MKRAKLIKREEIIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE
Number of Associated Samples	54
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.06 %
% of genes near scaffold ends (potentially truncated)	13.71 %
% of genes from short scaffolds (< 2000 bps)	76.61 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.677 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (29.839 % of family members)
Environment Ontology (ENVO)	Unclassified (49.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.54% β-sheet: 0.00% Coil/Unstructured: 63.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07724	AAA_2	14.52
PF00491	Arginase	6.45
PF10431	ClpB_D2-small	5.65
PF02861	Clp_N	2.42
PF05199	GMC_oxred_C	2.42
PF13450	NAD_binding_8	1.61
PF00072	Response_reg	0.81
PF01266	DAO	0.81
PF01694	Rhomboid	0.81
PF00732	GMC_oxred_N	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	6.45
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	3.23
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.42
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
All Organisms	root	All Organisms	40.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
cellular organisms	root	All Organisms → cellular organisms	40.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.68 %
Ruegeria pomeroyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9131750	All Organisms → cellular organisms → Bacteria	5516	Open in IMG/M
3300000559\|F14TC_100061209	All Organisms → cellular organisms → Bacteria	3684	Open in IMG/M
3300000559\|F14TC_106819137	Not Available	1057	Open in IMG/M
3300000787\|JGI11643J11755_11636525	Not Available	1113	Open in IMG/M
3300003911\|JGI25405J52794_10170052	Not Available	500	Open in IMG/M
3300004633\|Ga0066395_10035687	Not Available	2108	Open in IMG/M
3300005332\|Ga0066388_100009438	All Organisms → cellular organisms → Bacteria → Acidobacteria	7456	Open in IMG/M
3300005332\|Ga0066388_100222895	All Organisms → cellular organisms → Bacteria	2516	Open in IMG/M
3300005332\|Ga0066388_100338131	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300005332\|Ga0066388_100386686	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300005332\|Ga0066388_100596271	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005332\|Ga0066388_100941000	Not Available	1436	Open in IMG/M
3300005332\|Ga0066388_101374123	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005332\|Ga0066388_104192442	Not Available	735	Open in IMG/M
3300005332\|Ga0066388_106775171	Not Available	577	Open in IMG/M
3300005332\|Ga0066388_107072975	Not Available	564	Open in IMG/M
3300005332\|Ga0066388_108316070	Not Available	517	Open in IMG/M
3300005713\|Ga0066905_100112265	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300005713\|Ga0066905_100227299	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300005713\|Ga0066905_100252239	Not Available	1357	Open in IMG/M
3300005713\|Ga0066905_100374204	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005713\|Ga0066905_101357800	Not Available	642	Open in IMG/M
3300005713\|Ga0066905_101464494	Not Available	620	Open in IMG/M
3300005713\|Ga0066905_101605560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	595	Open in IMG/M
3300005764\|Ga0066903_102361486	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005764\|Ga0066903_103640040	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_104167301	Not Available	774	Open in IMG/M
3300005764\|Ga0066903_106876702	Not Available	591	Open in IMG/M
3300005937\|Ga0081455_10003803	All Organisms → cellular organisms → Bacteria	17225	Open in IMG/M
3300005937\|Ga0081455_10859183	Not Available	566	Open in IMG/M
3300005983\|Ga0081540_1020564	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300006049\|Ga0075417_10169251	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006196\|Ga0075422_10273067	Not Available	717	Open in IMG/M
3300006844\|Ga0075428_100350377	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300006844\|Ga0075428_100826029	Not Available	984	Open in IMG/M
3300006844\|Ga0075428_101909627	Not Available	617	Open in IMG/M
3300006844\|Ga0075428_102012784	Not Available	598	Open in IMG/M
3300006845\|Ga0075421_100140189	All Organisms → cellular organisms → Bacteria → Acidobacteria	3025	Open in IMG/M
3300006845\|Ga0075421_100228651	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300006845\|Ga0075421_100343945	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300006845\|Ga0075421_100409243	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300006846\|Ga0075430_100839843	Not Available	757	Open in IMG/M
3300006846\|Ga0075430_101418739	Not Available	571	Open in IMG/M
3300006847\|Ga0075431_100292956	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300006847\|Ga0075431_101014043	Not Available	797	Open in IMG/M
3300006847\|Ga0075431_101706023	Not Available	587	Open in IMG/M
3300006852\|Ga0075433_10269560	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300006852\|Ga0075433_11539937	Not Available	574	Open in IMG/M
3300006853\|Ga0075420_100961937	Not Available	735	Open in IMG/M
3300006880\|Ga0075429_100976106	Not Available	741	Open in IMG/M
3300006903\|Ga0075426_10735960	Not Available	740	Open in IMG/M
3300007004\|Ga0079218_11129603	Not Available	803	Open in IMG/M
3300007004\|Ga0079218_11754173	Not Available	692	Open in IMG/M
3300009094\|Ga0111539_10618485	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300009100\|Ga0075418_10574201	Not Available	1213	Open in IMG/M
3300009100\|Ga0075418_11318033	Not Available	783	Open in IMG/M
3300009147\|Ga0114129_11963303	Not Available	708	Open in IMG/M
3300009156\|Ga0111538_11425065	Not Available	874	Open in IMG/M
3300009792\|Ga0126374_10022545	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300009792\|Ga0126374_10178679	Not Available	1319	Open in IMG/M
3300010043\|Ga0126380_10027934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2811	Open in IMG/M
3300010043\|Ga0126380_10403517	Not Available	1016	Open in IMG/M
3300010043\|Ga0126380_10509160	Not Available	926	Open in IMG/M
3300010043\|Ga0126380_10697220	Not Available	816	Open in IMG/M
3300010046\|Ga0126384_10121624	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300010046\|Ga0126384_10168863	Not Available	1702	Open in IMG/M
3300010046\|Ga0126384_10365958	Not Available	1207	Open in IMG/M
3300010046\|Ga0126384_10457310	Not Available	1091	Open in IMG/M
3300010046\|Ga0126384_11462897	Not Available	639	Open in IMG/M
3300010046\|Ga0126384_11938016	Not Available	562	Open in IMG/M
3300010047\|Ga0126382_10598457	Not Available	907	Open in IMG/M
3300010047\|Ga0126382_11497304	Not Available	620	Open in IMG/M
3300010047\|Ga0126382_12077725	Not Available	543	Open in IMG/M
3300010047\|Ga0126382_12154349	Not Available	535	Open in IMG/M
3300010047\|Ga0126382_12344477	Not Available	517	Open in IMG/M
3300010358\|Ga0126370_10305795	Not Available	1263	Open in IMG/M
3300010358\|Ga0126370_10501667	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300010359\|Ga0126376_10398001	Not Available	1240	Open in IMG/M
3300010360\|Ga0126372_10196312	Not Available	1675	Open in IMG/M
3300010360\|Ga0126372_11877907	Not Available	644	Open in IMG/M
3300010362\|Ga0126377_10023838	All Organisms → cellular organisms → Bacteria	5076	Open in IMG/M
3300010362\|Ga0126377_10034118	All Organisms → cellular organisms → Bacteria	4330	Open in IMG/M
3300010362\|Ga0126377_10133744	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300010362\|Ga0126377_10255913	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300010362\|Ga0126377_10478053	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300010362\|Ga0126377_10502525	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300010362\|Ga0126377_10742576	Not Available	1037	Open in IMG/M
3300010362\|Ga0126377_11298245	Not Available	800	Open in IMG/M
3300010362\|Ga0126377_12080347	Not Available	644	Open in IMG/M
3300010362\|Ga0126377_12266315	Not Available	619	Open in IMG/M
3300010366\|Ga0126379_12464171	Not Available	619	Open in IMG/M
3300010366\|Ga0126379_13661493	Not Available	515	Open in IMG/M
3300012081\|Ga0154003_1001173	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	8323	Open in IMG/M
3300012081\|Ga0154003_1003582	All Organisms → cellular organisms → Bacteria	4501	Open in IMG/M
3300012081\|Ga0154003_1006339	All Organisms → cellular organisms → Bacteria	3005	Open in IMG/M
3300012081\|Ga0154003_1008559	Not Available	2401	Open in IMG/M
3300012081\|Ga0154003_1048169	Not Available	731	Open in IMG/M
3300012410\|Ga0134060_1409630	Not Available	620	Open in IMG/M
3300012944\|Ga0137410_10010228	All Organisms → cellular organisms → Bacteria	6347	Open in IMG/M
3300012948\|Ga0126375_11789384	Not Available	536	Open in IMG/M
3300012971\|Ga0126369_10707226	Not Available	1085	Open in IMG/M
3300012971\|Ga0126369_10780728	Not Available	1037	Open in IMG/M
3300015371\|Ga0132258_10457292	All Organisms → cellular organisms → Bacteria	3184	Open in IMG/M
3300015372\|Ga0132256_103164893	Not Available	553	Open in IMG/M
3300018469\|Ga0190270_10056387	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300019360\|Ga0187894_10007905	All Organisms → cellular organisms → Bacteria	9870	Open in IMG/M
3300019360\|Ga0187894_10016973	All Organisms → cellular organisms → Bacteria	5423	Open in IMG/M
3300019360\|Ga0187894_10039806	All Organisms → cellular organisms → Bacteria	2890	Open in IMG/M
3300019360\|Ga0187894_10078687	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300020078\|Ga0206352_10194810	Not Available	1163	Open in IMG/M
3300020080\|Ga0206350_11561341	Not Available	939	Open in IMG/M
3300027873\|Ga0209814_10031311	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300027874\|Ga0209465_10184865	Not Available	1039	Open in IMG/M
3300027907\|Ga0207428_10428637	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300027909\|Ga0209382_10028714	All Organisms → cellular organisms → Bacteria	6709	Open in IMG/M
3300027909\|Ga0209382_10065100	All Organisms → cellular organisms → Bacteria	4313	Open in IMG/M
3300027909\|Ga0209382_10289120	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300027909\|Ga0209382_10350642	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300027909\|Ga0209382_10898079	Not Available	933	Open in IMG/M
3300032013\|Ga0310906_10124712	Not Available	1460	Open in IMG/M
3300032261\|Ga0306920_102870423	Not Available	654	Open in IMG/M
3300034659\|Ga0314780_066542	Not Available	758	Open in IMG/M
3300034666\|Ga0314788_131668	Not Available	593	Open in IMG/M
3300034676\|Ga0314801_139610	Not Available	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.32%
Host-Associated	Host-Associated	34.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.32%
Plants	Host-Associated → Plants	30.65%
Fungi	Host-Associated → Fungi	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Mycelium	Host-Associated → Fungi → Mycelium	4.03%
Cave	Environmental → Terrestrial → Cave	3.23%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.81%
Loam	Environmental → Terrestrial → Soil → Loam	20.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	4.03%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.35%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	4.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	25.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.35%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	3.23%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02443770	2088090015	Soil	MKRAKLIKREEIIEREQNVVSKGENSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE
F14TC_1000612092	3300000559	Soil	MKRAKLIKREEIIEREQTAVSEGANSSAPESARHQPSVVKLTFDAVRKWASERQSGKSVKPREAFDALFAEPRTNE*
F14TC_1068191372	3300000559	Soil	MKRAKLIKREEIIERQQAAASDPDVSTPKTEASPPSVVKLTFDAVRKWASERQSNKSIKPREAFDALFAEPRTNE*
JGI11643J11755_116365252	3300000787	Soil	MKRAKLIKREEIIEREQNVVSKGENSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE*
JGI25405J52794_101700521	3300003911	Tabebuia Heterophylla Rhizosphere	MKRAKLIKREEIIEREQAAVSEGANSSSTESATQQPSVVKLTFDAVRKWASEHQSGKYVKPREAFDALFAEPRTNE*
Ga0066395_100356874	3300004633	Tropical Forest Soil	MKRAKLIKREEIIEREQSAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0066388_1000094387	3300005332	Tropical Forest Soil	MKRAKLIKREEIIERQHAASSPDPDTSAPETVTPQPSVVKLTFDAVRKWASERQSNKSVKPREAFDALFAEPRTNE*
Ga0066388_1002228951	3300005332	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASESANPSAPESTTQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFVEPRTNE*
Ga0066388_1003381313	3300005332	Tropical Forest Soil	MKRAKLIKREEIIERQQAASSAEPDVSTPAPPTPQPSVVKLTFDAVRKWANERQSSKSVKPREAFDALFAEPRTNE*
Ga0066388_1003866862	3300005332	Tropical Forest Soil	MKRAKLIKREELIEREQAAVSEDANSSATGAATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0066388_1005962711	3300005332	Tropical Forest Soil	MKRARLIKREEVLERQQAASSGGPEPSEPQSSTPQPSVVRLTVDAVRKWANERQSNKSVKPREAFDALFAEPRMSE*
Ga0066388_1009410003	3300005332	Tropical Forest Soil	MKRAKLIKREEVIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWANERQSGKYAKPREAFDALFAEPRTNE*
Ga0066388_1013741232	3300005332	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSAPESTTQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0066388_1041924421	3300005332	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASDGAKEPAQQPPAQQPSVVKLTFDAVRKWANERQSNKTVKPREAFDALFAEPRTNE*
Ga0066388_1067751711	3300005332	Tropical Forest Soil	MKRARLIKREEVIERQQTATSEIKESTAPNAKPQPSVVKLTVDAVRKWANDRQSNKSVKPREAFDALFAQPRLNE*
Ga0066388_1070729751	3300005332	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPR
Ga0066388_1083160701	3300005332	Tropical Forest Soil	MKRAKLIKREEIIEREQTAEAPGANSSATESATQQPSVVKLTFDAVRKWASEHQSGKYVKPREAFDALFAEPRTNE*
Ga0066905_1001122651	3300005713	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANSSSDGSATQQPSVVKLTFDAVRKWASEHQSGKYVKPREAFDALFAEPRTNE*
Ga0066905_1002272992	3300005713	Tropical Forest Soil	MKRAKLIKREEVIEREQAAMSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0066905_1002522392	3300005713	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANPSTTESATQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0066905_1003742042	3300005713	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSATESATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0066905_1013578001	3300005713	Tropical Forest Soil	MKRAKLIKRDEIIERQHAASSADAEASSPETVTAAPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0066905_1014644941	3300005713	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSASESATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0066905_1016055601	3300005713	Tropical Forest Soil	MKRARLIKREEVMERQQAASSAGPEPAEPQSSTPQPSVVRLTVDAVRKWANERQSNKSVKPREAFDALFAEPRMSE*
Ga0066903_1023614861	3300005764	Tropical Forest Soil	MKRAKLIKREEIIERQHAASSATPDVSAPTPPTPQPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRT
Ga0066903_1036400401	3300005764	Tropical Forest Soil	MKRARLIKREELIEQQQSATSEIKGPSAPVTKPQPSRVKLTVDAVRKWANDRQSSKAVKPREAFDALFARPRLND*
Ga0066903_1041673011	3300005764	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANPSAPESTTQLPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0066903_1068767021	3300005764	Tropical Forest Soil	MKRAKLIKREEVIEREQAAVSEDANSSATGAATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0081455_1000380312	3300005937	Tabebuia Heterophylla Rhizosphere	MKRAKLIKREEVIEREQAAISEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0081455_108591832	3300005937	Tabebuia Heterophylla Rhizosphere	MKRAKLIKREEIIEREQNVVSEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0081540_10205644	3300005983	Tabebuia Heterophylla Rhizosphere	MKRAKLIKRDEIIERQHSSADPGRESSPAQPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0075417_101692512	3300006049	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGVDSSATGATTQQPSVVKLTFDAVRKWATERQSGKCAKPREAFDALFAEPRTNE*
Ga0075422_102730671	3300006196	Populus Rhizosphere	MKRAKLIKREDIIEREQNVVSKGDDSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE*
Ga0075428_1003503771	3300006844	Populus Rhizosphere	MKRAKLIKREDIIEREQTAVSEGANSSATESAKHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075428_1008260292	3300006844	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGADSSATGAATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0075428_1019096271	3300006844	Populus Rhizosphere	MKRAKLIKREEIIEREQATVSEGANSSATGTATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075428_1020127841	3300006844	Populus Rhizosphere	MKRAKLIKREEILEREQNVASEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0075421_1001401895	3300006845	Populus Rhizosphere	MKRAKLIKRDEIIEREQTIATEGVDSSATGAATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0075421_1002286512	3300006845	Populus Rhizosphere	MKRAKLIKREEVIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWANERQSGKCSKPREAFDALFAEPRTNE*
Ga0075421_1003439454	3300006845	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGANSSATGAATTQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0075421_1004092432	3300006845	Populus Rhizosphere	MKRAKLIKREEIIEREQSAVSEGANPSTTESATQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0075430_1008398433	3300006846	Populus Rhizosphere	IKREEIIEREQTAVSEGANPSTTESATQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0075430_1014187391	3300006846	Populus Rhizosphere	MKRAKLIKRDEIIEREQTIATEGVDSSATGAATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAE
Ga0075431_1002929562	3300006847	Populus Rhizosphere	MKRAKLIKREEIIEREQAAVSEDANPSATESAPQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0075431_1010140431	3300006847	Populus Rhizosphere	IRVGGEDMKRAKLIKREEILEREQNVASEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKSAKPREAFDALFAEPRTNE*
Ga0075431_1017060232	3300006847	Populus Rhizosphere	MKRAKLIKREEIIEREQAIVSEGANSSATGTATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075433_102695602	3300006852	Populus Rhizosphere	MKRAKLIKREEIIEREQTAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0075433_115399371	3300006852	Populus Rhizosphere	MKRAKLIKREDIIEREQNAVSKGDDSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE*
Ga0075420_1009619371	3300006853	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGADSSATGTATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE*
Ga0075429_1009761061	3300006880	Populus Rhizosphere	MKRAKLIKREEIIEREQTAVSEGANSSATESAKHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075426_107359601	3300006903	Populus Rhizosphere	VGGEDMKRAKLIKREEIIEREQTAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0079218_111296031	3300007004	Agricultural Soil	MKRAKLIKREEIIEREQNVASEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTNE*
Ga0079218_117541731	3300007004	Agricultural Soil	MKRAKLIKREEIIEREQAAASESARETTQESPAQQPSVVRLTFDAVRRWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0111539_106184852	3300009094	Populus Rhizosphere	MKRAKLIKREDIIEREQTAVSEGANSSATESATHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075418_105742011	3300009100	Populus Rhizosphere	MKRAKLIKREEIIEREQTAVSEGANSSATESATHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0075418_113180332	3300009100	Populus Rhizosphere	MKRAKLIEREEIIEREQAIVSEGANSSATGTATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0114129_119633032	3300009147	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGADSSATGAATQQPSVVKLTFDAVRKWASERQSGKYAKPREAFDALFAEPRTNE*
Ga0111538_114250652	3300009156	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGVDSSATGATTQQPSVVKLTFDAVRKWANERQSGKYAKPREAFDALFAEPRTNE*
Ga0126374_100225452	3300009792	Tropical Forest Soil	MKRAKLIKREEIIERQHAASSATPDVSAPTPPTPQPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0126374_101786793	3300009792	Tropical Forest Soil	MKRAKLIKREEIIDREQAAASEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126380_100279343	3300010043	Tropical Forest Soil	MKRAKLIKREEIIEREQAAAAESVRESGQEATAQQPSVVKLTFDAVRKWANERQSGKSIKPREAFDALFAEPRTNE*
Ga0126380_104035171	3300010043	Tropical Forest Soil	MKRAKLIKRDEIIERQHAASSADSEASSPETVTAAPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0126380_105091601	3300010043	Tropical Forest Soil	RQHAASSATPDVSAPTPPTPQPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0126380_106972202	3300010043	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126384_101216242	3300010046	Tropical Forest Soil	MKRAKLIKREEIIERQQATSSAEPDVSTPAAPTQQPSVVKLTFDAVRKWANERQSSKSVKPREAFDALFAEPRTNE*
Ga0126384_101688634	3300010046	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSATESATQQPSVVKLTFDAVRKWASEHQSGKYVKPREAFDALFAEPRTNE*
Ga0126384_103659581	3300010046	Tropical Forest Soil	MKRARLIKREKVIERQQAASSAGPDPSAPERPMSQPSVVKLTVDAVRKWANERQSNRSVKPREAFDALFVEPRTSE*
Ga0126384_104573102	3300010046	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEDANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126384_114628971	3300010046	Tropical Forest Soil	VREGEEMKRARLIKREEVMERQQSASSEINESASPNSKPQPSVVKLTVDAVRKWANDRQSNKSTKPREAFDALFAQPRLNE*
Ga0126384_119380161	3300010046	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVAPGADSSAPETATQQPSVVKLTFDAVRKWATERQSGKYVKPREAFDALFAEPRTNE*
Ga0126382_105984571	3300010047	Tropical Forest Soil	MKRARLIKREEIIEREQSASAEAASASTSEVEAQPSVVKLTFDAVRKWATERQSNRSVKPREAFDALFIEPRTNE*
Ga0126382_114973041	3300010047	Tropical Forest Soil	EGGEGMKRARLIKREEIIEREQSASAEGASASTSEVEAQPSVVKLTFDAVRKWATERQSNRSVKPREAFDALFVEPRTNE*
Ga0126382_120777251	3300010047	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSATGAATQQPSVVKMTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0126382_121543491	3300010047	Tropical Forest Soil	VGGEDMKRAKLIKREEIIEREQAAVSEGANSSSDGSATQQPSVVKLTFDAVRKWASEHQSGKYVKPREAFDALFAEPRTNE*
Ga0126382_123444771	3300010047	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSAPESVTQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0126370_103057952	3300010358	Tropical Forest Soil	MKRAKLIKREEIIEREQAAAAESVRESGQEATAQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0126370_105016672	3300010358	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANPSAPESSGQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126376_103980013	3300010359	Tropical Forest Soil	MKHAKLIKREEIIEREQAAAAESVRESGQEATAQQPSVVKLTFDAVRKWANERQSGKSIKPREAFDALFAEPRTNE*
Ga0126372_101963122	3300010360	Tropical Forest Soil	MKRAKLIKREEIIERQQAASSAEPDVSAPAPPSPQPSVVKLTFDAVRKWANERQSSKSVKPREAFDALFAEPRTNE*
Ga0126372_118779071	3300010360	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASESVRESGQEATAQQPAVVKLTFDAVRKWANERQSGKSIKPREAFDALFAEPRTNE*
Ga0126377_100238387	3300010362	Tropical Forest Soil	LEVNKLLNQSSTIYKKVDSSYKKSIQVGGEDMKRAKLIKREEIIEREQTAVPEGAKSSATESATQQPSVVKLTFDAVRKWANERQSGKYVKPREAFDALFAEPRTNE*
Ga0126377_100341182	3300010362	Tropical Forest Soil	MKRAKLIKREEIIEREQNASAEAASSSTSEVDAQPSVVKLTFDAVRKWATERQSNRSVKPREAFDALFVEPRTNE*
Ga0126377_101337441	3300010362	Tropical Forest Soil	KRDEIIERQHAASSADSEASSPETVTAAPSVVKLTFDAVRKWANERQSNKSVKPREAFDALFAEPRTNE*
Ga0126377_102559132	3300010362	Tropical Forest Soil	MKRAKLIKREEIIEREQTAASESAKEAAQESPAQQPSVVRLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0126377_104780532	3300010362	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGAKSSAPESATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0126377_105025252	3300010362	Tropical Forest Soil	MKRAKLIKREEIIERQQAASSAESDVSAPAPPTPQPSVVKLTFDAVRKWANERQSNKSVKKPREAFDALFAEPRTNE*
Ga0126377_107425763	3300010362	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASESAKESAQESPAQQPSVVRLTFDAVRRWANERQSNKSIKPREAFDALFAEPRTNE*
Ga0126377_112982452	3300010362	Tropical Forest Soil	NLQKSIKKSIRVGGEDMKRAKLIKREEVIEREQAAVSEGANSSAPGTATPQPSVVKLTFDAVRKWANERQSGKYAKPREAFDALFAEPRTNE*
Ga0126377_120803471	3300010362	Tropical Forest Soil	KVDSSYKKSIQVKKEDMKRAKLIKREEIIEREQGAVSEDANPSTTESVTQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0126377_122663151	3300010362	Tropical Forest Soil	MKRAKLIKREEIIEREQTAVSEGANSSAPESATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE*
Ga0126379_124641712	3300010366	Tropical Forest Soil	IRVGGEDMKRAKLIKREEIIDREQAAASEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126379_136614931	3300010366	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASESVKEPGQEATAHQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFVEPRTNE*
Ga0154003_10011738	3300012081	Attine Ant Fungus Gardens	MKRAKLIKREEIIEREQAAVSEDPNSPATKSATQQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTSE*
Ga0154003_10035824	3300012081	Attine Ant Fungus Gardens	MLEVNKLLNQSSTIYKNSIRVGGENMKRAKLIKRDEIIEREQNVVSEGVDSSATGAATQQPSVVKLTFDAVRKWASERQSGKYAKPREAFDALFAEPRTNE*
Ga0154003_10063392	3300012081	Attine Ant Fungus Gardens	MKRAKLIKRDEIIERQNAGSSADHDASAPKTESPPSVVKMTFDAVRKWANERQSTKTVKPREAFDALFAEPRTNE*
Ga0154003_10085591	3300012081	Attine Ant Fungus Gardens	SIKNSIRVGGDDMKRAKLIKREEIIEREQNVASEGADSSATGAATKQQPSVVKLTFDAVRKWATERQSGKYVKPREAFDALFAEPRTNE*
Ga0154003_10481692	3300012081	Attine Ant Fungus Gardens	MKRAKLIKREEIIEREQTGASEGADSSATKAATQQPSVVKLTFDAVRKWASERQSGKYAKPREAFDALFAEPRTNE*
Ga0134060_14096302	3300012410	Grasslands Soil	MKRAKLIKREEIIEREQAAVSEGDKSSATGAATQQPSVVKLTFDAVRKWANERQSGKFVKPREAFDALFAEPRTNE*
Ga0137410_100102285	3300012944	Vadose Zone Soil	MKRAKLIKREEIIEREQAAASESANPSAPESTTQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFIEPRTNE*
Ga0126375_117893841	3300012948	Tropical Forest Soil	MKRAKLIKREEVIEREQAAMSEGAKSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE*
Ga0126369_107072262	3300012971	Tropical Forest Soil	MKRAKLIKREEIIEREQAAVSEGANQSAPESTAQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE*
Ga0126369_107807281	3300012971	Tropical Forest Soil	MKRAKLIKREEIIEREQAAASESVRESGQEATAQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFVEPRTNE*
Ga0132258_104572924	3300015371	Arabidopsis Rhizosphere	MKRAKLIKREEIIEREQAAASESVKETTQESPAQQPSVVKLTFDAVRRWANERQSNKSVKPREAFEALFAEPRTNE*
Ga0132256_1031648931	3300015372	Arabidopsis Rhizosphere	VNKLRIILQKSISIKKTIRVGGEIMKRAKLIKREEIIEREQAAASESVKETTQESPAQQPSVVKLTFDAVRRWANERQSNKSVKPREAFEALFAEPRTNE*
Ga0190270_100563872	3300018469	Soil	MKRAKLIKREEILEREQNGVSEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE
Ga0187894_100079057	3300019360	Microbial Mat On Rocks	MKRARLIKREEVIERQQAASSADPNPSASGAASGAAPEGPKPQPSVVKLTVDAVRKWANERQSNKSVKPREAFEALFAEPRTSE
Ga0187894_100169738	3300019360	Microbial Mat On Rocks	MKRAKLIKREEAIERQQAAASEAEGAASPKSSTSQPSVVRLTVDAVRKWANERQSNKPVKPREAFDALFAEPRMSE
Ga0187894_100398067	3300019360	Microbial Mat On Rocks	MKRARLIKREEIIERQQTASSEVADSSEPQAPKPQPSVVKLTVDAVRKWANERQSNKSAKPREAFDALFAQPRTSE
Ga0187894_100786873	3300019360	Microbial Mat On Rocks	MKRARLIKREEVIERQQAASSADPGPLASETPKPPPSVVKLTVDAVRKWANERQSNRSVKPREAFDALFAEPRTNE
Ga0206352_101948101	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAKLIKREDIIEREQNVVSKGDDSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDAPFAEPRTSE
Ga0206350_115613412	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAKLIKREDIIEREQNVVSKGDDSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE
Ga0209814_100313112	3300027873	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGVDSSATGATTQQPSVVKLTFDAVRKWATERQSGKCAKPREAFDALFAEPRTNE
Ga0209465_101848652	3300027874	Tropical Forest Soil	MKRAKLIKREEIIEREQSAVSEGANSSAPGTATQQPSVVKLTFDAVRKWASERQSGKSAKPREAFDALFAEPRTNE
Ga0207428_104286372	3300027907	Populus Rhizosphere	MKRAKLIKREDIIEREQTAVSEGANSSATESAKHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPR
Ga0209382_100287145	3300027909	Populus Rhizosphere	MKRAKLIKRDEIIEREQTIATEGVDSSATGAATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE
Ga0209382_100651004	3300027909	Populus Rhizosphere	MKRAKLIKREDIIEREQTAVSEGANSSATESAKHQPSVVKLTFDAVRKWASERQSGKYVKPREAFDALFAEPRTNE
Ga0209382_102891202	3300027909	Populus Rhizosphere	MKRAKLIKREEVIEREQAAVSEGANSSAPGTATQQPSVVKLTFDAVRKWANERQSGKCSKPREAFDALFAEPRTNE
Ga0209382_103506421	3300027909	Populus Rhizosphere	MKRAKLIKREEIIEREQAAVSEDANPSATESAPQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFAEPRTNE
Ga0209382_108980792	3300027909	Populus Rhizosphere	MKRAKLIKREEIIEREQNVVSEGADSSATGAATQQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE
Ga0310906_101247122	3300032013	Soil	MKRAKLIKREEIIEREQNVASEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKIAKPREAFDALFAEPRTSE
Ga0306920_1028704231	3300032261	Soil	MKRAKLIKREEIIEREQAAVSEGANQSAPESTAQQPSVVKLTFDAVRKWANERQSGKSVKPREAFDALFVEPRTNE
Ga0314780_066542_8_238	3300034659	Soil	MKRAKLIKREEIIEREQNVVSEGADSSATGAATPQPSVVKLTFDAVRKWATERQSGKYAKPREAFDALFAEPRTNE
Ga0314788_131668_3_221	3300034666	Soil	LIKREEIIEREQNVASEGADSSATGAATTQQPSVVKLTFDAVRKWATERQSGKSAKPREAFDALFAEPRTNE
Ga0314801_139610_240_470	3300034676	Soil	MKRAKLIKREEIIEREQNVASEGADSSATGAATPQPSVVKLTFDAVRKWAIERQSGKYAKPREAFDALFAEPRTNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences