NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068972

Metagenome / Metatranscriptome Family F068972

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068972
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 75 residues
Representative Sequence MDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKSKT
Number of Associated Samples 93
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 24.19 %
% of genes near scaffold ends (potentially truncated) 24.19 %
% of genes from short scaffolds (< 2000 bps) 75.81 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.129 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(12.097 % of family members)
Environment Ontology (ENVO) Unclassified
(51.613 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(67.742 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.43%    β-sheet: 1.94%    Coil/Unstructured: 45.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF04989CmcI 40.32
PF02225PA 8.87
PF04389Peptidase_M28 8.87
PF01757Acyl_transf_3 1.61
PF01795Methyltransf_5 1.61
PF10066DUF2304 1.61
PF00535Glycos_transf_2 0.81
PF04461DUF520 0.81
PF13231PMT_2 0.81
PF00583Acetyltransf_1 0.81
PF00005ABC_tran 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG3510Cephalosporin hydroxylaseDefense mechanisms [V] 40.32
COG027516S rRNA C1402 N4-methylase RsmHTranslation, ribosomal structure and biogenesis [J] 1.61
COG1666Cyclic di-GMP-binding protein YajQ, UPF0234 familySignal transduction mechanisms [T] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.13 %
UnclassifiedrootN/A8.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459018|G1P06HT01D79D6All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae579Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105732616All Organisms → cellular organisms → Bacteria → Acidobacteria2650Open in IMG/M
3300000955|JGI1027J12803_103627827All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300004092|Ga0062389_102495261All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300004114|Ga0062593_100463834All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1159Open in IMG/M
3300004153|Ga0063455_101175493All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae573Open in IMG/M
3300005327|Ga0070658_10136181All Organisms → cellular organisms → Bacteria2049Open in IMG/M
3300005328|Ga0070676_10876319All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae667Open in IMG/M
3300005330|Ga0070690_100126604All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300005331|Ga0070670_100581059All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300005335|Ga0070666_10001343All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae14924Open in IMG/M
3300005336|Ga0070680_100940591All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae746Open in IMG/M
3300005337|Ga0070682_101836594All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005339|Ga0070660_100007648All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7530Open in IMG/M
3300005339|Ga0070660_100234528All Organisms → cellular organisms → Bacteria1493Open in IMG/M
3300005339|Ga0070660_101754798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia529Open in IMG/M
3300005341|Ga0070691_10144173All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300005343|Ga0070687_101002143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia605Open in IMG/M
3300005355|Ga0070671_100052961All Organisms → cellular organisms → Bacteria3374Open in IMG/M
3300005355|Ga0070671_100975681All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300005364|Ga0070673_101094302All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300005439|Ga0070711_100550298All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae957Open in IMG/M
3300005445|Ga0070708_100257833All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300005458|Ga0070681_10028380All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5625Open in IMG/M
3300005458|Ga0070681_10733857All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300005458|Ga0070681_11626567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae571Open in IMG/M
3300005530|Ga0070679_100118965All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2626Open in IMG/M
3300005530|Ga0070679_101290877All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300005530|Ga0070679_101576148Not Available604Open in IMG/M
3300005535|Ga0070684_100213770All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1758Open in IMG/M
3300005539|Ga0068853_101118297All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae760Open in IMG/M
3300005544|Ga0070686_101843414All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae515Open in IMG/M
3300005545|Ga0070695_101292039All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300005548|Ga0070665_100105171All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2825Open in IMG/M
3300005548|Ga0070665_100133073All Organisms → cellular organisms → Bacteria2488Open in IMG/M
3300005548|Ga0070665_100940613All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300005614|Ga0068856_100106592All Organisms → cellular organisms → Bacteria2797Open in IMG/M
3300005617|Ga0068859_100396416All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1476Open in IMG/M
3300005836|Ga0074470_11552353All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300005842|Ga0068858_102015667All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae571Open in IMG/M
3300005843|Ga0068860_101890110All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae619Open in IMG/M
3300006052|Ga0075029_100137239All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300006162|Ga0075030_100571082All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300006237|Ga0097621_100011861All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6442Open in IMG/M
3300006237|Ga0097621_100163115All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300006237|Ga0097621_100252318All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300006358|Ga0068871_100238996All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300006358|Ga0068871_101473126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia643Open in IMG/M
3300006638|Ga0075522_10047037All Organisms → cellular organisms → Bacteria2519Open in IMG/M
3300006638|Ga0075522_10065315All Organisms → cellular organisms → Bacteria2054Open in IMG/M
3300006881|Ga0068865_100836952All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae796Open in IMG/M
3300009093|Ga0105240_10000937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae51776Open in IMG/M
3300009093|Ga0105240_11104748All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300009093|Ga0105240_11634193Not Available674Open in IMG/M
3300009098|Ga0105245_10038687All Organisms → cellular organisms → Bacteria4244Open in IMG/M
3300009174|Ga0105241_10248507All Organisms → cellular organisms → Bacteria → Acidobacteria1507Open in IMG/M
3300009174|Ga0105241_10335653All Organisms → cellular organisms → Bacteria → Acidobacteria1308Open in IMG/M
3300009545|Ga0105237_11519684All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300009551|Ga0105238_12723767All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300010373|Ga0134128_12220790All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300010375|Ga0105239_12468220All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010880|Ga0126350_10067801Not Available569Open in IMG/M
3300012923|Ga0137359_10716111All Organisms → cellular organisms → Bacteria → Acidobacteria871Open in IMG/M
3300012929|Ga0137404_11315347Not Available666Open in IMG/M
3300012931|Ga0153915_10329856All Organisms → cellular organisms → Bacteria1711Open in IMG/M
3300013104|Ga0157370_10203478All Organisms → cellular organisms → Bacteria1836Open in IMG/M
3300013105|Ga0157369_10142720All Organisms → cellular organisms → Bacteria2533Open in IMG/M
3300013306|Ga0163162_10101400Not Available2970Open in IMG/M
3300013307|Ga0157372_10386068All Organisms → cellular organisms → Bacteria1631Open in IMG/M
3300013308|Ga0157375_10005350All Organisms → cellular organisms → Bacteria → Acidobacteria11154Open in IMG/M
3300014054|Ga0120135_1031518All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300014501|Ga0182024_10168507All Organisms → cellular organisms → Bacteria3045Open in IMG/M
3300014501|Ga0182024_11159022All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300014838|Ga0182030_10087756All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4420Open in IMG/M
3300015063|Ga0167649_100873All Organisms → cellular organisms → Bacteria → Acidobacteria4268Open in IMG/M
3300017966|Ga0187776_11327685Not Available545Open in IMG/M
3300020579|Ga0210407_10497631All Organisms → cellular organisms → Bacteria → Acidobacteria953Open in IMG/M
3300021170|Ga0210400_10580183All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300021178|Ga0210408_10245484All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1426Open in IMG/M
3300021181|Ga0210388_10822100All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300021478|Ga0210402_11973134Not Available509Open in IMG/M
3300021861|Ga0213853_10713344All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium649Open in IMG/M
3300025862|Ga0209483_1043517All Organisms → cellular organisms → Bacteria2150Open in IMG/M
3300025862|Ga0209483_1050396All Organisms → cellular organisms → Bacteria → Acidobacteria1963Open in IMG/M
3300025899|Ga0207642_10105024All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300025900|Ga0207710_10171026All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300025900|Ga0207710_10373545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter morelensis729Open in IMG/M
3300025903|Ga0207680_10015628All Organisms → cellular organisms → Bacteria3966Open in IMG/M
3300025903|Ga0207680_10513732All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300025911|Ga0207654_10013516All Organisms → cellular organisms → Bacteria4201Open in IMG/M
3300025911|Ga0207654_10282476All Organisms → cellular organisms → Bacteria → Acidobacteria1123Open in IMG/M
3300025911|Ga0207654_10311753All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300025911|Ga0207654_10992325All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium610Open in IMG/M
3300025912|Ga0207707_10055343All Organisms → cellular organisms → Bacteria3451Open in IMG/M
3300025912|Ga0207707_10088602All Organisms → cellular organisms → Bacteria2704Open in IMG/M
3300025912|Ga0207707_10192088All Organisms → cellular organisms → Bacteria → Acidobacteria1781Open in IMG/M
3300025913|Ga0207695_10012065All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus10388Open in IMG/M
3300025913|Ga0207695_11527135All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300025914|Ga0207671_10746708All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300025917|Ga0207660_10545342All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300025921|Ga0207652_11477591Not Available583Open in IMG/M
3300025927|Ga0207687_10024942All Organisms → cellular organisms → Bacteria3999Open in IMG/M
3300025931|Ga0207644_10066083All Organisms → cellular organisms → Bacteria2632Open in IMG/M
3300025941|Ga0207711_11870659All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300025949|Ga0207667_10542825All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300026041|Ga0207639_11779941All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300026095|Ga0207676_10167371All Organisms → cellular organisms → Bacteria → Acidobacteria1911Open in IMG/M
3300026095|Ga0207676_10989854All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300027911|Ga0209698_10723148All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300027986|Ga0209168_10369223All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300028381|Ga0268264_10457448Not Available1238Open in IMG/M
3300028800|Ga0265338_10528217All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300028800|Ga0265338_11224495Not Available503Open in IMG/M
3300028800|Ga0265338_11236057All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300029999|Ga0311339_11959459Not Available503Open in IMG/M
3300031524|Ga0302320_11229457All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300031525|Ga0302326_10188141All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3474Open in IMG/M
3300031708|Ga0310686_108288757All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300031754|Ga0307475_10623451All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300031823|Ga0307478_10460672All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300031823|Ga0307478_10879990All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300032174|Ga0307470_10147801All Organisms → cellular organisms → Bacteria1432Open in IMG/M
3300032174|Ga0307470_10583821All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M
3300033475|Ga0310811_10383582All Organisms → cellular organisms → Bacteria → Acidobacteria1551Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere12.10%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere11.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.03%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.03%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere4.03%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.23%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.23%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.23%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.23%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.42%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.42%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.61%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.61%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.81%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.81%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.81%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.81%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459018Litter degradation MG2EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014054Permafrost microbial communities from Nunavut, Canada - A34_5cm_12MEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015063Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2MG_029489102170459018Switchgrass, Maize And Mischanthus LitterMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPRT
INPhiseqgaiiFebDRAFT_10573261633300000364SoilMDVXKVXSDLRAYKAQLDEAIAVFXRLAHQRGKRGRPIGLVSKRRPVSAEARQRMAVAQRKRWAAARKAKAKA*
JGI1027J12803_10362782733300000955SoilLSDLRAYKAQLDEAIAVFDRLAHQRGKRGRPIGLVSKRRPVSAEARQRMAVAQRKRWAAARKAKAKA*
Ga0062389_10249526123300004092Bog Forest SoilMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARKASAKSKS*
Ga0062593_10046383413300004114SoilMDVVKVLLDLRAYKAQLDDAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARQRMAAAQRKRWAAARRASAKSKA*
Ga0063455_10117549313300004153SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGLPSTRRPVSAEARERMAAAQRKRWAAARRASAKPKA*
Ga0070658_1013618123300005327Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAIAQRKRWAAARKANAKSKT*
Ga0070676_1087631913300005328Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0070690_10012660423300005330Switchgrass RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRKGNAAKPKS*
Ga0070670_10058105913300005331Switchgrass RhizosphereMDVAKVLSDLRAYKVQLDEAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARERMAAAQSKRWAAARRANAKSKA*
Ga0070666_10001343133300005335Switchgrass RhizosphereMDILKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGNAAKPKS*
Ga0070680_10094059113300005336Corn RhizosphereMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKAKP*
Ga0070682_10183659423300005337Corn RhizosphereVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAIAQRKRWAAARKANAKSKT*
Ga0070660_10000764823300005339Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSRRRPVSAEARERMAIAQRKRWAAARKANAKSKT*
Ga0070660_10023452823300005339Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPRT*
Ga0070660_10175479823300005339Corn RhizosphereMDVLKVLRDLRDYKVELDQAIAIFDRLAHNRGKRGRPIQAPSARRPVSTAARQRMAAAQRKRWAAVRKSKAAKPKS*
Ga0070691_1014417323300005341Corn, Switchgrass And Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMMVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0070687_10100214323300005343Switchgrass RhizosphereTMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0070671_10005296123300005355Switchgrass RhizosphereMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMASAQRKRWAAARKASAKSKT*
Ga0070671_10097568123300005355Switchgrass RhizosphereMDVAKVLADLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGLASKRRPVSAEARERMAAAQSKRWAA
Ga0070673_10109430213300005364Switchgrass RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAA
Ga0070711_10055029813300005439Corn, Switchgrass And Miscanthus RhizosphereSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAIAQRKRWAAARKANAKSKT*
Ga0070708_10025783333300005445Corn, Switchgrass And Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRVSAAARERMAEAQRKRWAMARKEKAAKPKS*
Ga0070681_1002838063300005458Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAIAQRKRWAAARKANAKSKA*
Ga0070681_1073385723300005458Corn RhizosphereMDVVKVLSDLRAYKAQLDDAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARQRMAAAQRKRWAAARRASAKSKA*
Ga0070681_1162656723300005458Corn RhizosphereCEYWGTMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0070679_10011896533300005530Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAAAQRKRWAAMRKSNAAKPKS*
Ga0070679_10129087713300005530Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMATAQRKRWAAARKANAKSKT*
Ga0070679_10157614823300005530Corn RhizosphereMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKTKT*
Ga0070684_10021377023300005535Corn RhizosphereMDVAKVLSDLRVYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMATAQRKRWAAARKANAKSKT*
Ga0068853_10111829713300005539Corn RhizosphereLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPRT*
Ga0070686_10184341413300005544Switchgrass RhizosphereRKNCQYWGTMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGNAAKPKS*
Ga0070695_10129203913300005545Corn, Switchgrass And Miscanthus RhizosphereVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKAK
Ga0070665_10010517123300005548Switchgrass RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMATAQRKRWAAMRKSNAAKPKS*
Ga0070665_10013307333300005548Switchgrass RhizosphereMDVAKVLSDLRAYKVQLDEAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARERMAAAQSKRWAAARRANAKPKA*
Ga0070665_10094061323300005548Switchgrass RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGNAAKPKS*
Ga0068856_10010659223300005614Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPKT*
Ga0068859_10039641613300005617Switchgrass RhizosphereMDVAKVLADLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGLASKRRPVSAEARERMAAAQSKRWAAARKASAKSKT*
Ga0074470_1155235323300005836Sediment (Intertidal)MDVAKVLSDLRAYQAQLDEAIAIFDRLAHQRGKRGRPIGVRSVRRPVGAEARKRMAAAQRKRWAAARKLKAVKSRS*
Ga0068858_10201566713300005842Switchgrass RhizosphereDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0068860_10189011013300005843Switchgrass RhizosphereYWGTMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAVAQRKRWAAMRKGNAAKPKS*
Ga0075029_10013723923300006052WatershedsMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARQRMAAAQRKRWAAARKGNAKPKS*
Ga0075030_10057108213300006162WatershedsMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSAEARQRMAVAQRKRWAAARKASAKSKT*
Ga0097621_10001186123300006237Miscanthus RhizosphereMDILKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRKGNAAKPKS*
Ga0097621_10016311533300006237Miscanthus RhizosphereMDVVKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKSKT*
Ga0097621_10025231823300006237Miscanthus RhizosphereMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARKAKSKA*
Ga0068871_10023899623300006358Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAAAQRKRWAALRKSNAAKPKS*
Ga0068871_10147312623300006358Miscanthus RhizosphereDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRKGNAAKPKS*
Ga0075522_1004703733300006638Arctic Peat SoilMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGASSKRRPVSPEARERMAAAQRKRWAAARRASAKTKS*
Ga0075522_1006531523300006638Arctic Peat SoilMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGGAKSKA*
Ga0068865_10083695213300006881Miscanthus RhizosphereMDVVKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGVPSKRRPVSAEARERMAAAQRKRWAAARKASSKSKT*
Ga0105240_10000937453300009093Corn RhizosphereMDVLKVLRDLREYKVELDQAIAIFDRLAHNRGKRGRPIQAPSARRPVSTAARQRMAAAQRKRWAAVRKSKAAKPKS*
Ga0105240_1110474823300009093Corn RhizosphereMDVIKVLEDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRTVSEAARKRMAAAQRKRWAVVRKNKAAKP*
Ga0105240_1163419323300009093Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMATAQRKRWAAARKASAKSKT*
Ga0105245_1003868723300009098Miscanthus RhizosphereMDVAKVLADLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVASKRRPVSAEARERMAAAQSKRWAAARKANAKSKT*
Ga0105241_1024850723300009174Corn RhizosphereMKVLEDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRTVSEAARKRMAAAQRKRWAVVRKNKAAKP*
Ga0105241_1033565323300009174Corn RhizosphereMDVAKVLSDLRAYKAQLDEAIAVFDRLAHQRGKRGRPIGLVSKRRAVSAEARQRMAVAQRKRWAAARRASAKSRA*
Ga0105237_1151968423300009545Corn RhizosphereMDVIKVLEDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRTVSEAARKRMAAAQRKRWAVV
Ga0105238_1272376723300009551Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGN
Ga0134128_1222079023300010373Terrestrial SoilMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKG
Ga0105239_1246822013300010375Corn RhizosphereMDVAKVLSELRAYKAQLDEAIAIFDRLAHQRGKRGRPIGIRSARRPVSPDARKRMAIAQRKRWAAVRKQKSVKSKS*
Ga0126350_1006780123300010880Boreal Forest SoilMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGVRSGRRPVSPEARQRMAAAQRKRWATARKQKSAKAKS*
Ga0137359_1071611113300012923Vadose Zone SoilMDVAKVLSDLRAYKLQLDEAIAIFDRLAHQRGKRGRPIGVASKRRPVSAEARQRMAAAQRKRWAAARKASAKSKT*
Ga0137404_1131534723300012929Vadose Zone SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAATRKASAKSKG*
Ga0153915_1032985613300012931Freshwater WetlandsMDVLKVLGDLRAYKAELDQAIAIFDRLAHNRGKRGRPIQAPSARRPVSAAARKRMAAAQRKRWAAARKSKAAKPKS*
Ga0157370_1020347833300013104Corn RhizosphereMDVLKVLRDLRDHKVELDQAIAIFDRLAHNRGKRGRPIQAPSALRPVSTAARQRMAAAQRKRWA
Ga0157369_1014272023300013105Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRMVSAEARERMAAAQRKRWAAARKGAAKPRT*
Ga0163162_1010140033300013306Switchgrass RhizosphereMDVVKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGVPSKRRKRWAAARKASAKSKT
Ga0157372_1038606813300013307Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPKI*
Ga0157375_1000535013300013308Miscanthus RhizosphereMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKA
Ga0120135_103151813300014054PermafrostMDVAKVLSDLRAYKAQLDEAIAVFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARRAERKAYFELEAQPATITP*
Ga0182024_1016850723300014501PermafrostMDVAKVLSDLRVYKAQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSPEARERMAVAQRKRWAAARKASAKTKP*
Ga0182024_1115902223300014501PermafrostMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARKANAKSKS*
Ga0182030_1008775623300014838BogMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARKRMAAAQRKRWAAARKGSAKPKS*
Ga0167649_10087353300015063Glacier Forefield SoilMDVVKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARKSSGKSKT*
Ga0187776_1132768523300017966Tropical PeatlandMDVAKVLTDLREYKAQLDRAIAIFDRLARQRGKRGRPIGSASKRRPVSAEARERMAAAQRKRWAAVRKAAAGSKS
Ga0210407_1049763123300020579SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKSKT
Ga0210400_1058018313300021170SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARGRMAAAQRKRWAAARKASAKSKT
Ga0210408_1024548423300021178SoilMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARRASAKSKSKT
Ga0210388_1082210023300021181SoilMDVAKVLSDLRAYKMQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSPEARERMAAAQSKRWAAARKAAAKTKS
Ga0210402_1197313413300021478SoilYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARRASAKSKSKT
Ga0213853_1071334413300021861WatershedsMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSAEARQRMAIAQRKRWAAARKASAKSKT
Ga0209483_104351723300025862Arctic Peat SoilMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGGAKSKA
Ga0209483_105039633300025862Arctic Peat SoilMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGASSKRRPVSPEARERMAAAQRKRWAAARRASAKTKS
Ga0207642_1010502423300025899Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMATAQRKRWAAMRKSNAAKPKS
Ga0207710_1017102623300025900Switchgrass RhizosphereMDVAKVLADLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGLASKRRPVSAEARERMAAAQSKRWAAARKASAKSKT
Ga0207710_1037354523300025900Switchgrass RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRKGNAAKPKS
Ga0207680_1001562853300025903Switchgrass RhizosphereMDILKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGNAAKPKS
Ga0207680_1051373223300025903Switchgrass RhizosphereMDVAKVLSDLRAYKVQLDEAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARERMAAAQSKRWAAARRANAKSKA
Ga0207654_1001351643300025911Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAAAQRKRWAAMRKGNAAKPKS
Ga0207654_1028247623300025911Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSRRRPVSAEARERMAIAQRKRWAAARKANAKSKT
Ga0207654_1031175323300025911Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPKT
Ga0207654_1099232523300025911Corn RhizosphereVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARQRMAAAQRKRWAAARKAKSKA
Ga0207707_1005534343300025912Corn RhizosphereMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKAKP
Ga0207707_1008860233300025912Corn RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHSRGKRGRPMLVPSTRRTVSAAARKRMAAAQRKRWAAMRKSNAAKPKS
Ga0207707_1019208823300025912Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMATAQRKRWAAARKANAKSKA
Ga0207695_1001206573300025913Corn RhizosphereMDVLKVLGDLREYKVELDQAIAIFDRLAHNRGKRGRPIQAPSARRPVSTAARQRMAAAQRKRWAAVRKSKAAKPKS
Ga0207695_1152713513300025913Corn RhizosphereKVLEDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRTVSEAARKRMAAAQRKRWAVVRKNKAAKP
Ga0207671_1074670823300025914Corn RhizosphereMDVVKVLLDLRAYKAQLDDAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARQRMAAAQRKRWAAARRASAKSKA
Ga0207660_1054534223300025917Corn RhizosphereMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVASKRRPVSAEARERMATAQRKRWAAARKANAKSKA
Ga0207652_1147759123300025921Corn RhizosphereMDEAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKTKT
Ga0207687_1002494253300025927Miscanthus RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHDRGKRGRPLLVPSARRTVSAAARKRMAAAQRKRWAAIRRGNAAKPKS
Ga0207644_1006608323300025931Switchgrass RhizosphereMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMASAQRKRWAAARKASAKSKT
Ga0207711_1187065913300025941Switchgrass RhizosphereMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMASAQRKRWAAARKASAKSK
Ga0207667_1054282523300025949Corn RhizosphereMDVLKVLRDLREYKVELDQAIAIFDRLAHNRGKRGRPIQAPSARRPVSTAARQRMAAAQRKRWAAVRKSKAAKPKS
Ga0207639_1177994123300026041Corn RhizosphereLRAYKAELDRAIAIFERLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGAAKPRT
Ga0207676_1016737123300026095Switchgrass RhizosphereQPDIWHLLPHPSLPNTSWAMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMASAQRKRWAAARKASAKSKT
Ga0207676_1098985423300026095Switchgrass RhizosphereMDVVKVLLDLRAYKAQLDDAIAIFDRLAHQRGKRGRPVGVPSKRRPVSAEARERMAAAQSKRWAAARRANAKPKA
Ga0209698_1072314813300027911WatershedsMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSAEARQRMAVAQRKRWAAARKASAKSKT
Ga0209168_1036922323300027986Surface SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAATRKASAKSKT
Ga0268264_1045744813300028381Switchgrass RhizosphereMDVVKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKS
Ga0265338_1052821723300028800RhizosphereMDVLKVLGDLRTYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARQRMAAAQRKRWAAARKRSAKPKA
Ga0265338_1122449523300028800RhizosphereMDVMKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARERMAAAQRKRWAAARKGSKKPKS
Ga0265338_1123605723300028800RhizosphereMDVLKVLGDLRAYKAELDRAIAIFDRLAHNRGKRGRPVLVPSARRRTVSAEARQRMAAAQRKRWAAARKGNAKPKA
Ga0311339_1195945913300029999PalsaMDVVKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGAPSKRRPVSAEARERMAAAQRKRWAAARKASAKTKT
Ga0302320_1122945713300031524BogKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPLGAPSKRRPVSAEARERMAAAQRKRWAAARKASAKTKT
Ga0302326_1018814123300031525PalsaMDVLKVLGDLRAYKAQLDEAIAIFDRLARKRGKRGRPIKAPSARHSVSQDARNRMAMAQRKRWAGARKKKAVKS
Ga0310686_10828875713300031708SoilMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGAPSKRRPVSPEARERMAVAQRKRWAAARRASAKTKS
Ga0307475_1062345123300031754Hardwood Forest SoilMDVAKVLTDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASGKSKT
Ga0307478_1046067223300031823Hardwood Forest SoilMDVAKVLSDLRAYKVQLDEAIAIFDRLAHQRGKRGRPIGASSKRRPVSAEARARMAAAQQKRWAAARKASAKPKP
Ga0307478_1087999013300031823Hardwood Forest SoilAMDVAKVLSDLRVYKAQLDEAIAIFDRLAHQRGKRGRPIGSPSKRRPVSAEARERMAAAQRKRWAAARKASAKPKT
Ga0307470_1014780123300032174Hardwood Forest SoilMDVAKVLADLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKSKT
Ga0307470_1058382113300032174Hardwood Forest SoilKYWLSMDVAKVLSDLRAYKAQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAAAQRKRWAAARKASAKSKT
Ga0310811_1038358223300033475SoilMDVAKVLSDLRAYKTQLDEAIAIFDRLAHQRGKRGRPIGVPSKRRPVSAEARERMAIAQRKRWAAARKANAKSKT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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