Metagenome / Metatranscriptome Family F068881

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068881
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	46 residues
Representative Sequence	MSYRSLALAVAAFSSMHVASADAQSVYVAPGGVYVGGGPVYVIPA
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.17 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	94.35 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.935 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.710 % of family members)
Environment Ontology (ENVO)	Unclassified (22.581 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.484 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.40% β-sheet: 13.70% Coil/Unstructured: 58.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01425	Amidase	6.45
PF04392	ABC_sub_bind	1.61
PF00982	Glyco_transf_20	1.61
PF01555	N6_N4_Mtase	0.81
PF13592	HTH_33	0.81
PF13578	Methyltransf_24	0.81
PF00375	SDF	0.81
PF02040	ArsB	0.81
PF13565	HTH_32	0.81
PF00665	rve	0.81
PF13521	AAA_28	0.81
PF00872	Transposase_mut	0.81
PF12706	Lactamase_B_2	0.81
PF09361	Phasin_2	0.81
PF06596	PsbX	0.81
PF14534	DUF4440	0.81
PF13424	TPR_12	0.81
PF13683	rve_3	0.81
PF04519	Bactofilin	0.81
PF03972	MmgE_PrpD	0.81
PF12697	Abhydrolase_6	0.81
PF09347	DUF1989	0.81
PF13442	Cytochrome_CBB3	0.81
PF00561	Abhydrolase_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	6.45
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.61
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.61
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.81
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.81
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.81
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.81
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.81
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.81
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.81
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.81
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.81
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.81
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.81
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
All Organisms	root	All Organisms	33.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
cellular organisms	root	All Organisms → cellular organisms	33.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.16 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.03 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.23 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.23 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.81 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.81 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.81 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.81 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.23 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.81 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.81 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.81 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.81 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.81 %
Bradyrhizobium cosmicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cosmicum	0.81 %
Novosphingobium rosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	0.81 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.81 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	0.81 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.81 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.81 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.81 %
Bradyrhizobium cosmicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cosmicum	0.81 %
Novosphingobium rosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	0.81 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.23 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.81 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	0.81 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.81 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.81 %
Bradyrhizobium algeriense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	0.81 %
Bradyrhizobium cosmicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cosmicum	0.81 %
Novosphingobium rosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	0.81 %
Defluviicoccus vanus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	0.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02F41LV	Not Available	511	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101991959	Not Available	719	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104963098	Not Available	1018	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1077882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300000955\|JGI1027J12803_109449520	Not Available	544	Open in IMG/M
3300000956\|JGI10216J12902_123027748	Not Available	557	Open in IMG/M
3300001160\|JGI12654J13325_1012940	Not Available	598	Open in IMG/M
3300001593\|JGI12635J15846_10432273	Not Available	788	Open in IMG/M
3300001661\|JGI12053J15887_10543054	Not Available	554	Open in IMG/M
3300003505\|JGIcombinedJ51221_10351151	Not Available	600	Open in IMG/M
3300004152\|Ga0062386_101091118	Not Available	662	Open in IMG/M
3300004463\|Ga0063356_102176522	Not Available	843	Open in IMG/M
3300005172\|Ga0066683_10615105	Not Available	656	Open in IMG/M
3300005181\|Ga0066678_10936236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300005332\|Ga0066388_100079326	Not Available	3644	Open in IMG/M
3300005332\|Ga0066388_100296839	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300005332\|Ga0066388_100645325	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300005332\|Ga0066388_102620606	Not Available	919	Open in IMG/M
3300005332\|Ga0066388_105782085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cosmicum	625	Open in IMG/M
3300005332\|Ga0066388_106202870	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_107541196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300005439\|Ga0070711_102027029	Not Available	506	Open in IMG/M
3300005553\|Ga0066695_10462801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	781	Open in IMG/M
3300005561\|Ga0066699_10361582	Not Available	1038	Open in IMG/M
3300005764\|Ga0066903_101119172	Not Available	1454	Open in IMG/M
3300005764\|Ga0066903_104028764	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005764\|Ga0066903_104072847	Not Available	783	Open in IMG/M
3300006047\|Ga0075024_100313561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300006358\|Ga0068871_101728421	Not Available	593	Open in IMG/M
3300006796\|Ga0066665_10469084	Not Available	1036	Open in IMG/M
3300006844\|Ga0075428_101615462	Not Available	678	Open in IMG/M
3300006847\|Ga0075431_102006534	Not Available	534	Open in IMG/M
3300009012\|Ga0066710_102629323	Not Available	722	Open in IMG/M
3300009089\|Ga0099828_10605745	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300009098\|Ga0105245_13287423	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009100\|Ga0075418_10321414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1651	Open in IMG/M
3300009148\|Ga0105243_10169343	Not Available	1890	Open in IMG/M
3300009174\|Ga0105241_11184003	Not Available	723	Open in IMG/M
3300009817\|Ga0105062_1118689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	535	Open in IMG/M
3300010037\|Ga0126304_11147354	Not Available	532	Open in IMG/M
3300010047\|Ga0126382_10412205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1058	Open in IMG/M
3300010335\|Ga0134063_10273178	Not Available	808	Open in IMG/M
3300010358\|Ga0126370_12547244	Not Available	510	Open in IMG/M
3300010359\|Ga0126376_11416005	Not Available	720	Open in IMG/M
3300010362\|Ga0126377_12041526	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300010362\|Ga0126377_13371130	Not Available	517	Open in IMG/M
3300010362\|Ga0126377_13461219	Not Available	510	Open in IMG/M
3300010366\|Ga0126379_12370482	Not Available	630	Open in IMG/M
3300010376\|Ga0126381_101325733	Not Available	1040	Open in IMG/M
3300010400\|Ga0134122_10787876	Not Available	905	Open in IMG/M
3300012189\|Ga0137388_11093490	Not Available	734	Open in IMG/M
3300012198\|Ga0137364_10378742	Not Available	1057	Open in IMG/M
3300012199\|Ga0137383_10199738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300012200\|Ga0137382_10717474	Not Available	717	Open in IMG/M
3300012211\|Ga0137377_10585605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300012212\|Ga0150985_121455801	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012358\|Ga0137368_10869030	Not Available	552	Open in IMG/M
3300012927\|Ga0137416_12142638	Not Available	514	Open in IMG/M
3300012960\|Ga0164301_10961252	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012988\|Ga0164306_10483323	Not Available	949	Open in IMG/M
3300012989\|Ga0164305_11689163	Not Available	568	Open in IMG/M
3300014969\|Ga0157376_10176996	Not Available	1947	Open in IMG/M
3300015245\|Ga0137409_10210511	Not Available	1745	Open in IMG/M
3300015357\|Ga0134072_10336349	Not Available	575	Open in IMG/M
3300015372\|Ga0132256_100290251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1717	Open in IMG/M
3300015372\|Ga0132256_103085103	Not Available	560	Open in IMG/M
3300015374\|Ga0132255_104010643	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300015374\|Ga0132255_104224432	Not Available	609	Open in IMG/M
3300016270\|Ga0182036_10086057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2096	Open in IMG/M
3300016319\|Ga0182033_12041397	Not Available	522	Open in IMG/M
3300016371\|Ga0182034_10373049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → Defluviicoccus vanus	1164	Open in IMG/M
3300016387\|Ga0182040_10616272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	880	Open in IMG/M
3300016387\|Ga0182040_10743486	Not Available	805	Open in IMG/M
3300017973\|Ga0187780_10526498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium algeriense	845	Open in IMG/M
3300018072\|Ga0184635_10169143	Not Available	873	Open in IMG/M
3300018078\|Ga0184612_10226210	Not Available	969	Open in IMG/M
3300018078\|Ga0184612_10448525	Not Available	642	Open in IMG/M
3300018429\|Ga0190272_13268567	Not Available	505	Open in IMG/M
3300018431\|Ga0066655_10519133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791	Open in IMG/M
3300018431\|Ga0066655_10741779	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300018468\|Ga0066662_12553975	Not Available	539	Open in IMG/M
3300018482\|Ga0066669_12197043	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300021168\|Ga0210406_10126477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2157	Open in IMG/M
3300021384\|Ga0213876_10208414	Not Available	1039	Open in IMG/M
3300021405\|Ga0210387_10783325	Not Available	843	Open in IMG/M
3300021479\|Ga0210410_11440330	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021560\|Ga0126371_10268495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	1825	Open in IMG/M
3300022694\|Ga0222623_10228645	Not Available	719	Open in IMG/M
3300022694\|Ga0222623_10294368	Not Available	624	Open in IMG/M
3300025910\|Ga0207684_11278937	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	605	Open in IMG/M
3300026528\|Ga0209378_1235702	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300026538\|Ga0209056_10173195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1616	Open in IMG/M
3300027384\|Ga0209854_1052574	Not Available	703	Open in IMG/M
3300027521\|Ga0209524_1019640	Not Available	1395	Open in IMG/M
3300027680\|Ga0207826_1033573	Not Available	1425	Open in IMG/M
3300027903\|Ga0209488_10834820	Not Available	651	Open in IMG/M
3300028802\|Ga0307503_10894904	Not Available	513	Open in IMG/M
3300028807\|Ga0307305_10087962	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300031058\|Ga0308189_10063316	Not Available	1070	Open in IMG/M
3300031544\|Ga0318534_10430494	Not Available	757	Open in IMG/M
3300031740\|Ga0307468_100788593	Not Available	808	Open in IMG/M
3300031748\|Ga0318492_10340609	Not Available	784	Open in IMG/M
3300031764\|Ga0318535_10360220	Not Available	650	Open in IMG/M
3300031781\|Ga0318547_10753251	Not Available	606	Open in IMG/M
3300031833\|Ga0310917_10593787	Not Available	752	Open in IMG/M
3300031847\|Ga0310907_10032303	Not Available	1896	Open in IMG/M
3300031879\|Ga0306919_10934286	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031890\|Ga0306925_11301466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	722	Open in IMG/M
3300031912\|Ga0306921_11823673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	653	Open in IMG/M
3300031912\|Ga0306921_11956637	Not Available	626	Open in IMG/M
3300031912\|Ga0306921_12762054	Not Available	503	Open in IMG/M
3300031941\|Ga0310912_11320354	Not Available	546	Open in IMG/M
3300031947\|Ga0310909_10935539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300031947\|Ga0310909_11536390	Not Available	529	Open in IMG/M
3300031954\|Ga0306926_11599141	Not Available	748	Open in IMG/M
3300031954\|Ga0306926_12962782	Not Available	508	Open in IMG/M
3300032076\|Ga0306924_11597749	Not Available	687	Open in IMG/M
3300032076\|Ga0306924_12262167	Not Available	552	Open in IMG/M
3300032090\|Ga0318518_10066713	Not Available	1745	Open in IMG/M
3300032180\|Ga0307471_100439900	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300032261\|Ga0306920_100493643	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.90%
Host-Associated	Host-Associated	12.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.26%
Plants	Host-Associated → Plants	12.10%
Aquatic	Environmental → Aquatic	5.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.26%
Sediment	Environmental → Aquatic → Sediment	4.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Roots	Host-Associated → Plants → Roots	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.52%
Loam	Environmental → Terrestrial → Soil → Loam	14.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_06729600	2170459005	Grass Soil	MSYRSLVLAVAAFSSMHVASADAQSVYVAPGGVYV
INPhiseqgaiiFebDRAFT_1019919592	3300000364	Soil	MSYRSSLAVAAVVAALSMMHIASAAAQSVYVAPGG
INPhiseqgaiiFebDRAFT_1049630983	3300000364	Soil	MSYRSAALLIVTFASLHVGSAQAQSVYVAPGGVYVGAGPVYVTPAPGPSYAAPAYGY
AF_2010_repII_A100DRAFT_10778822	3300000655	Forest Soil	MNYRLLALAIAALSSAHITTAAAQSVYVAPGSVYIGG
JGI1027J12803_1094495201	3300000955	Soil	MSYRSLAVAGAVAALSVMHTANAAAQSVYVAPGGIY
JGI10216J12902_1230277481	3300000956	Soil	MTYRSLALAVAAFSSLHVASADAQSIYVAPGGVYVGGGPVYV
JGI12654J13325_10129401	3300001160	Forest Soil	MSYRSLAFALAGATLLSLHVGSAAAQSVYVAPGGIYIGAGAGPVYVTPPAPTNG
JGI12635J15846_104322731	3300001593	Forest Soil	MSYRSHALALAGAALLSMHVGSAAAQSVYVAPGGIYIAPGAGPVYVTPP
JGI12053J15887_105430541	3300001661	Forest Soil	MSYRSLALALAGAALLSMHVGSAAAQSVYVAPGGIYIGAGAGPVYVTPLCQTGTTTV
JGIcombinedJ51221_103511511	3300003505	Forest Soil	MRYRPLALAAGVATLASMHVASATAQSAYVAPGGIYIGAGAGPVHVTP
Ga0062386_1010911181	3300004152	Bog Forest Soil	MSYRPLALGIAVAALSSMHIASAAAQSVYVAPGGVYVAPGAGPVYVTPSAPINGAA
Ga0063356_1021765223	3300004463	Arabidopsis Thaliana Rhizosphere	MSYRILALSIATLASMPVASAQAQSVYVAPGGVYVANGPVYVTPAPGYGAAG
Ga0066683_106151052	3300005172	Soil	MSYRPLALGIAVAALSSMHIGSAAAQSVYVAPGGVYVAPGAGPVYVTPSAPINGAA
Ga0066678_109362362	3300005181	Soil	MSYRSLAILVTALWAAPIASADAQSVYVAPGGVYIGAGPVYVT
Ga0066388_1000793263	3300005332	Tropical Forest Soil	MSYRSLALATAMAALPLMHIASAATRSVYVAPGGIYISAGAGPIYATPSALLAIP*
Ga0066388_1002968391	3300005332	Tropical Forest Soil	MNYRLLALAIAALSSAHITTAAAQSVYVAPGSVYIGGGPVYV
Ga0066388_1006453251	3300005332	Tropical Forest Soil	MKYRLLALAIAALSSAHITTAAAQSVYVAPGSVYIGGGPVYV
Ga0066388_1026206062	3300005332	Tropical Forest Soil	MGHRSLVLAIAAFSSLHIADANAQSVYVAPGGVYIAGGPVFVTPAPGNGVAPYA
Ga0066388_1057820851	3300005332	Tropical Forest Soil	MNYRLLALAIAALSSAHVTTAAAQSVYVAPGAVYIGGGPVYVNPAPSYGYGNAYY
Ga0066388_1062028702	3300005332	Tropical Forest Soil	MNYRLLALAITALSSAHITTAAAQSVYVAPGSVYIGGGPV
Ga0066388_1075411962	3300005332	Tropical Forest Soil	MSYRSLVLAVAAFSSMHVASADAQSVYVAPGGVYVGTARSM*
Ga0070711_1020270291	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTYRSLALAVAAFSSLHVASADAQSIYVAPGGVYVGGGPVYVIP
Ga0066695_104628013	3300005553	Soil	MSYRSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGP
Ga0066699_103615822	3300005561	Soil	MSYRSLALAVAVFSSMHVASAEAQSVYVAPGGVYIGAGPVYVTP
Ga0066903_1011191722	3300005764	Tropical Forest Soil	MSYRSPALAAAVAALSMMHIANAAAQSVYVAPGGVYVA
Ga0066903_1040287642	3300005764	Tropical Forest Soil	MSYRSVALAVAALSSFPFASADAQSVYVAPGGVYIGGGPVYVTPAPNI
Ga0066903_1040728473	3300005764	Tropical Forest Soil	MSYRSTALGAVVAGLSAMQFASAAAQSVYVAPGGVYVAPGA
Ga0075024_1003135612	3300006047	Watersheds	MSYRPLALGIAVAALSSMHIGSAAAQSVYVAPGGVYVAPGAGPIYVTPSAPINGAAAYVG
Ga0068871_1017284211	3300006358	Miscanthus Rhizosphere	MTYRSLALATAVAASSWMLIASAAAQSVYVAPGGVYVAPGAGPVYVTPPGPI
Ga0066665_104690843	3300006796	Soil	MSYRSLVLAVAALASMHVTSADAQSVYVAPGGVYVGSGPVYVIPAPNNG
Ga0075428_1016154623	3300006844	Populus Rhizosphere	MNYRLLALAIAALSSAHITTAAAQSVYVAPGGVYIGGGPVYVIPAP
Ga0075431_1020065342	3300006847	Populus Rhizosphere	MNYRSLALAIAALSSAPITTAAAQSVYVAPGGVYIG
Ga0066710_1026293232	3300009012	Grasslands Soil	MSYRPLAVAIAVAALSSMHIASAAAQSVYVAPGGVYIGAG
Ga0099828_106057453	3300009089	Vadose Zone Soil	MSYRILALSIATLASMPVASAQAQSVYVAPGGVYVANGPVYVTPAPGYG
Ga0105245_132874231	3300009098	Miscanthus Rhizosphere	MNYRLFALAIAVLSSTHIATAAGQSVYVAPGGVYIGGGP
Ga0075418_103214141	3300009100	Populus Rhizosphere	LALAIAALSSAHITTAAAQSVYVAPGGVYIGGGPVYVIPAPSNGNGTQ*
Ga0105243_101693432	3300009148	Miscanthus Rhizosphere	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGGPVYVIPAPSNGNGTYVEP
Ga0105241_111840031	3300009174	Corn Rhizosphere	MNYRLFALAIAVLSSTHIATAAGQSVYVAPGGVYIGGGPVYVIPAPSNGNGTYV
Ga0105062_11186891	3300009817	Groundwater Sand	MNYRLLALAIAALSSAHITSAHAQSVYVAPGGVYVGGGPVYVIPA
Ga0126304_111473541	3300010037	Serpentine Soil	MNYRSLALAIAALSSSHITTAVAQSVYVAPGGVYIGGGPVYVIPAPSNSNGTY
Ga0126382_104122053	3300010047	Tropical Forest Soil	MMYRSLALAIAALSSTQIATAEAQSVYVAPGGIYVQSARLFVNPA
Ga0134063_102731781	3300010335	Grasslands Soil	MSYRSLALAVAAFSSMSSASAAAQSVYVAPGGVYIGAGPV
Ga0126370_125472441	3300010358	Tropical Forest Soil	MGHRSLLLAIAAFSSLHVADANAQSVYVAPGGVYIGGGPVYVT
Ga0126376_114160053	3300010359	Tropical Forest Soil	MSYRSLAIAVAAFASMPLASADAQSVYVAPGGVYVGGGPVYVIPAPNN
Ga0126377_120415261	3300010362	Tropical Forest Soil	MNFRLLALTIGALSSAHVITAAAQSVYVAPGGVFIGGGPVYVVPAPSTY
Ga0126377_133711302	3300010362	Tropical Forest Soil	MIYRSLALAIAALSSTQIATAEAQSVYVAPGGIYVQSARLYVNPA
Ga0126377_134612191	3300010362	Tropical Forest Soil	MNFRLLAFTIGALSSAHVTTAAAQSVYVAPGGVFIGGGPV
Ga0126379_123704821	3300010366	Tropical Forest Soil	MTYRLLALAIAALSSAHTTTAAAQSVYVAPGAVYIGGGPVYVIPTPSYGNG
Ga0126381_1013257332	3300010376	Tropical Forest Soil	MMIRSLALAIAALSSAQIGMAEAQSVYVAPGGIYVAS
Ga0134122_107878761	3300010400	Terrestrial Soil	MNYRSLALAIAALSSTHITTAAGQTVYVAPGGVYIGG
Ga0137388_110934902	3300012189	Vadose Zone Soil	MSYRSLALAAVVGALSAMHIGSAAAQSVYVAPGGIYIGAG
Ga0137364_103787421	3300012198	Vadose Zone Soil	MSYRSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGPVYVIPAPNNGAPP
Ga0137383_101997381	3300012199	Vadose Zone Soil	MSYRSLALAVAALSLMHVASADAQSVYVAPGGVYVGG
Ga0137382_107174741	3300012200	Vadose Zone Soil	MSYRPLAVAAAVTALSVMHITNVSAQSVYVAPGGVYIGAGAGPVYV
Ga0137377_105856051	3300012211	Vadose Zone Soil	MSYRSLVLAVAAFSSMHVASADAQSVYVAPGGVYVGGGPVYVIPA
Ga0150985_1214558012	3300012212	Avena Fatua Rhizosphere	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGG
Ga0137368_108690302	3300012358	Vadose Zone Soil	MSYRILALSIATLAAMPAASAQAQSVYVAPGGVYVANGPVYVTPA
Ga0137416_121426381	3300012927	Vadose Zone Soil	MSYRSLAFALAGATLLSLHVGSAAAQSVYVAPGGIYIGAGAGPVYVTP
Ga0164301_109612522	3300012960	Soil	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGGPV
Ga0164306_104833231	3300012988	Soil	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGGPVYVIPAPSNGNGTYVEPTY
Ga0164305_116891631	3300012989	Soil	MTYRSLALAVAAFSSLHVASADAQSIYVAPGGVYVGGGPVYVIPAPNNG
Ga0157376_101769962	3300014969	Miscanthus Rhizosphere	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGGPVYVIPAPSNGNGTYVEPTYS
Ga0137409_102105111	3300015245	Vadose Zone Soil	MNYRLLALAIAALSSAHITTAAAQSVYVAPGGVYIGGGPVYVIPAPSNGNGYGNAYGYGN
Ga0134072_103363492	3300015357	Grasslands Soil	MRYRSIALAVAAFSSMHIANANAQSVYVAPGGVYIGAGPVYVTPAPSVPA
Ga0132256_1002902512	3300015372	Arabidopsis Rhizosphere	MSYRPLALATAVASFSWMLIASAAAQSVYVAPGGVYVAPGAGPVYVTPAGPIN
Ga0132256_1030851031	3300015372	Arabidopsis Rhizosphere	MSYRSHVLAAAVAALSTMHIANAAAQSVYVAPGGVYVAPGAGPVYVTPGVPNNGAA
Ga0132255_1040106431	3300015374	Arabidopsis Rhizosphere	MSYRSLSILVVALSSAPIATAGAQTVYVAPGGVYVGAGP
Ga0132255_1042244321	3300015374	Arabidopsis Rhizosphere	MSYRPLALATAVAASSWMLIASAAAQSVYVAPGGVYVAP
Ga0182036_100860573	3300016270	Soil	MRYRSFALAVAAFLAMSIASAAAQSVYVAPGGVYIGA
Ga0182033_120413971	3300016319	Soil	MSYRSRAIAVAAFASMHVASAKAQSVYVAPGGAYYGRG
Ga0182034_103730491	3300016371	Soil	MSYRPLVIAAAVTALSVMHITNVAAQSVYVAPGGVYIGAGAGPVFVG
Ga0182040_106162722	3300016387	Soil	MSYRSLALGAAVAALSSMYIGSAAAQSVYVAPGGVYVAPGAGPVYV
Ga0182040_107434861	3300016387	Soil	MSVRSLAITVAAISLMPVASASAQSVYVAPGGIYIGGGPVYVIPAPNN
Ga0187780_105264981	3300017973	Tropical Peatland	MSNRSLALGMATLASMYIGSAEAQSVYAAPGGVYIAGGPVYVIPAPNNGVAPYIAPTNGYGY
Ga0184635_101691431	3300018072	Groundwater Sediment	MNYRLLALAIAAVSSAHITTAAAQSVYVAPGGVYIGG
Ga0184612_102262102	3300018078	Groundwater Sediment	MNYRLLALAIAALSSAHITTAAAQSVYVAPGGVYIGGGPVYVIPAPSNGNGTYVEPTA
Ga0184612_104485252	3300018078	Groundwater Sediment	MRYRSLAFAVATLSSTHVVTAADAQSVYVAPGGIYVASGPVYVTPAPSYGAPPYAA
Ga0187769_105568072	3300018086	Tropical Peatland	MSNRSLALAMTTLASMYIGSAEAQSVYVAPGGVYIAGG
Ga0190272_132685671	3300018429	Soil	MRYRSLAFAVAALSSTHVATAADAQSVYVAPGGIYVASGPVYVTPAPSYGAPP
Ga0066655_105191331	3300018431	Grasslands Soil	MSYPSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGPVYV
Ga0066655_107417792	3300018431	Grasslands Soil	MSYRSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGPVYVIPAPNNGAP
Ga0066662_125539751	3300018468	Grasslands Soil	MSYRPLALGIAVAALSSMHIASAAAQSVYVAPGGVYVAPGAGP
Ga0066669_121970431	3300018482	Grasslands Soil	MSYRSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGPV
Ga0210406_101264774	3300021168	Soil	MSYRPLALGIAVAALSSMHIASAAAQSVYVAPGGVYV
Ga0213876_102084141	3300021384	Plant Roots	MGHRSLVLAIAAFSSIHVAGATAQSVYVAPGGVYVGGGPVYVTPAPNYGPTPY
Ga0210387_107833252	3300021405	Soil	MRYRPLALAAGVATLASMHVASATAQSAYVAPGGIYIGAGAGPV
Ga0210410_114403301	3300021479	Soil	MSHRSHALALAGAALLSMHVGGAAAQSVYVAPGGIYIAPGA
Ga0126371_102684951	3300021560	Tropical Forest Soil	MSVRSLAIAVATVSLMHIGNANAQSVYVAPGGVYIGGGPVYVIPAPNNGAPAYLA
Ga0222623_102286452	3300022694	Groundwater Sediment	MRYRSLALAVAAFSSLHVASADAQSVYVAPGGVYIGAGPVYV
Ga0222623_102943681	3300022694	Groundwater Sediment	LNYRSLALAIAALSSPQITPAAAQVVYVAPGGVYVGSGPVYVI
Ga0207684_112789372	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRPLAFGIAVAALSSMHIGSAAAQSVYVAPGGVYVAPGAGPV
Ga0209378_12357022	3300026528	Soil	MSYRSLVLAVAALSSMHVTNADAQSVYVAPGGVYVGSGPVY
Ga0209056_101731951	3300026538	Soil	MSYRSLALAVAAFSSMHVASADAQSVYVAPGGVYVGGGPVYVIPA
Ga0209854_10525741	3300027384	Groundwater Sand	MSYRSVALAVAAFSSMHVASADAQSVYVAPGGVYIGGGPVYVIPAPNNGA
Ga0209524_10196401	3300027521	Forest Soil	MSYRSLAFALAGATLLSLHVGSAAAQSVYVAPGGVYIGAGAGPVYVTPPAPT
Ga0207826_10335731	3300027680	Tropical Forest Soil	MSYRSLVFAAAAALSSMHVVGAAAQSVYVAPGGVYIGAGAGPVYVTPGVPGVGVPGNG
Ga0209488_108348202	3300027903	Vadose Zone Soil	MNYRSIGLAVAALSLAHIATAAAQSVYVAPGGVYIGGGPVYVTPAPSVGN
Ga0307503_108949041	3300028802	Soil	MRYRSLAFAVATLSSTHVATVADAQSVYVAPGGVYVASGPVYLTPAPSY
Ga0307305_100879621	3300028807	Soil	MNYRSLALAIAALSSAHITTAAGQSVYVAPGGVYIGG
Ga0308189_100633162	3300031058	Soil	MSYRSLAVAGAVAALSMMHIANAAAQVVNVAPGGIYVGPERQST
Ga0318534_104304941	3300031544	Soil	MRYRSLAISVAALSLAQVSVADAQSVYVAPGGVYVAPGAT
Ga0307468_1007885932	3300031740	Hardwood Forest Soil	MNYRLLALAIAALSSAHITATAAQSVYVAPGGVYIGGGPVYVIPAPSNGNGYGNANGYG
Ga0318492_103406091	3300031748	Soil	MSYRSLVLAAAAALSSMHIVSAAAQSVYVAPGGVYIGAGAGPVY
Ga0318535_103602202	3300031764	Soil	MSYRSLVLAAAAALSSMHIVSAAAQSVYVAPGGVYIGAGAGP
Ga0318547_107532511	3300031781	Soil	MSYRSLAFAIAAISSMHVANAHAQPVYVAPGGVYIGGGPVYVI
Ga0310917_105937871	3300031833	Soil	MSYRSLALGAAVAALSSMYIGSAAAQSDYVAPGGVYV
Ga0310907_100323032	3300031847	Soil	MNYRSLALAIAALSSTHITTAAGQSVYVAPGGVYIGGGPVYVIPAPSNGN
Ga0306919_109342862	3300031879	Soil	MSYRSLVLAAAAALASMHVVSAAAQSVYVAPGGVYIGAG
Ga0306925_113014661	3300031890	Soil	MGHRSLVLIIGAIASIYATSANAQSVYVAPGGVYVGGGPVYVTP
Ga0306925_113342742	3300031890	Soil	MSVRSLAIAVATVSLTHIGNANAQSVYVAPGGVYIG
Ga0306923_106884753	3300031910	Soil	MSVRSLAIAVATVSLMHIGNANAQSVYVAPGGVYIG
Ga0306921_118236732	3300031912	Soil	MSYRPLAVVAAVTTLSLMQIANAAAQSVYVAPGGIYIG
Ga0306921_119566372	3300031912	Soil	MGHRSVVLAIAAFASIHATIANAQSVYVAPGGVYIGGGPV
Ga0306921_127620542	3300031912	Soil	MSYRPLALAAAIAASSVMHIESVAAQSVYVAPGGI
Ga0310912_113203541	3300031941	Soil	MSYRSLAVAAAVAALLPMHIESAAAQSVYVAPGGVYIGAGAGPVYVTPAPPVNGAA
Ga0310909_109355392	3300031947	Soil	MGHRSLVLIIGAIASIYATSANAQSVYVAPGGVYVGGGPVYVTPAPAPYAAPTHGYGY
Ga0310909_115363901	3300031947	Soil	MSVRSLAIAVATVSLMHIGNANAQSVYVAPGGVYIGGGPVYVIPAPNN
Ga0306926_115991411	3300031954	Soil	MSYRPLAVVAAVTTLSLMQIANAAAQSVYVAPGGIYIGAGAGPVYVNSGAP
Ga0306926_129627821	3300031954	Soil	MSYRPLALVAVAAFSSMYIASATAQSVYVAPGGVYVAPGAGPVYVTP
Ga0306924_115977491	3300032076	Soil	MGHRSVVLAIAAFASIHATIANAQSVYVAPGGVYIGGG
Ga0306924_122621671	3300032076	Soil	MSYRSLAVAAAVAALLPMHIESAAAQSVYVAPGGVYIGAGAG
Ga0318518_100667133	3300032090	Soil	MRYRSFALAVAAFLAMSIASAAAQSVYVAPGGVYIGAGPVYVTPAPNLPAPY
Ga0307471_1004399003	3300032180	Hardwood Forest Soil	MNYRLLALAIAALSSAHITTAAAQSVYVAPGGVYIGGGPVYVTPAPSNG
Ga0306920_1004936434	3300032261	Soil	MSYRSLAVAAAVAALLPMHIESAAAQSVYVAPGGVYIGAGAGPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068881

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences