Metagenome / Metatranscriptome Family F068698

Basic Information
Family ID	F068698
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	81 residues
Representative Sequence	MIADPPTSGTRLGVGFDANRGRTRNEAWKNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFPERLDAL
Number of Associated Samples	82
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.65 %
% of genes near scaffold ends (potentially truncated)	55.65 %
% of genes from short scaffolds (< 2000 bps)	54.84 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Unclassified (62.903 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.452 % of family members)
Environment Ontology (ENVO)	Unclassified (34.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.613 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04545	Sigma70_r4	6.45
PF14870	PSII_BNR	0.81
PF03544	TonB_C	0.81
PF08281	Sigma70_r4_2	0.81
PF00155	Aminotran_1_2	0.81
PF13490	zf-HC2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
All Organisms	root	All Organisms	37.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
cellular organisms	root	All Organisms → cellular organisms	37.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	19.35 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	19.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.90 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	19.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10466391	Not Available	750	Open in IMG/M
3300002245\|JGIcombinedJ26739_100420775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300002910\|JGI25615J43890_1034108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	839	Open in IMG/M
3300004099\|Ga0058900_1387230	Not Available	551	Open in IMG/M
3300004119\|Ga0058887_1287520	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300005434\|Ga0070709_10346668	Not Available	1096	Open in IMG/M
3300005434\|Ga0070709_10910757	Not Available	696	Open in IMG/M
3300006047\|Ga0075024_100574988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	602	Open in IMG/M
3300006102\|Ga0075015_100948730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	524	Open in IMG/M
3300006755\|Ga0079222_10924012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	736	Open in IMG/M
3300007788\|Ga0099795_10653573	Not Available	503	Open in IMG/M
3300009088\|Ga0099830_10035366	All Organisms → cellular organisms → Bacteria → Acidobacteria	3416	Open in IMG/M
3300009089\|Ga0099828_11050423	Not Available	725	Open in IMG/M
3300009174\|Ga0105241_12598528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	508	Open in IMG/M
3300010860\|Ga0126351_1312786	Not Available	552	Open in IMG/M
3300010862\|Ga0126348_1166360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	529	Open in IMG/M
3300011269\|Ga0137392_10275793	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300011270\|Ga0137391_10175921	All Organisms → cellular organisms → Bacteria → Acidobacteria	1865	Open in IMG/M
3300011270\|Ga0137391_11281787	Not Available	580	Open in IMG/M
3300012096\|Ga0137389_10173205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1783	Open in IMG/M
3300012189\|Ga0137388_10208649	All Organisms → cellular organisms → Bacteria → Acidobacteria	1763	Open in IMG/M
3300012189\|Ga0137388_10922498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	807	Open in IMG/M
3300012203\|Ga0137399_10830558	Not Available	778	Open in IMG/M
3300012205\|Ga0137362_10124759	All Organisms → cellular organisms → Bacteria → Acidobacteria	2186	Open in IMG/M
3300012361\|Ga0137360_10324079	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300012363\|Ga0137390_10346049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1467	Open in IMG/M
3300012918\|Ga0137396_11187445	Not Available	539	Open in IMG/M
3300012925\|Ga0137419_10578403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	900	Open in IMG/M
3300015054\|Ga0137420_1453729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2079	Open in IMG/M
3300020583\|Ga0210401_10191444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1902	Open in IMG/M
3300021086\|Ga0179596_10199498	Not Available	973	Open in IMG/M
3300021088\|Ga0210404_10606083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	622	Open in IMG/M
3300021168\|Ga0210406_10744937	Not Available	751	Open in IMG/M
3300021170\|Ga0210400_10009830	All Organisms → cellular organisms → Bacteria	7752	Open in IMG/M
3300021170\|Ga0210400_10127324	All Organisms → cellular organisms → Bacteria → Acidobacteria	2037	Open in IMG/M
3300021170\|Ga0210400_11059134	Not Available	657	Open in IMG/M
3300021178\|Ga0210408_10549616	Not Available	916	Open in IMG/M
3300021420\|Ga0210394_11241101	Not Available	639	Open in IMG/M
3300021559\|Ga0210409_10473327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300021559\|Ga0210409_11211705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	630	Open in IMG/M
3300022504\|Ga0242642_1032384	Not Available	761	Open in IMG/M
3300022506\|Ga0242648_1076141	Not Available	553	Open in IMG/M
3300022507\|Ga0222729_1056605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	554	Open in IMG/M
3300022508\|Ga0222728_1078014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	598	Open in IMG/M
3300022508\|Ga0222728_1079567	Not Available	594	Open in IMG/M
3300022525\|Ga0242656_1083633	Not Available	603	Open in IMG/M
3300022529\|Ga0242668_1157351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	504	Open in IMG/M
3300022533\|Ga0242662_10218154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	607	Open in IMG/M
3300022722\|Ga0242657_1181396	Not Available	572	Open in IMG/M
3300022724\|Ga0242665_10257201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	596	Open in IMG/M
3300022724\|Ga0242665_10327908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	542	Open in IMG/M
3300022726\|Ga0242654_10298580	Not Available	592	Open in IMG/M
3300024330\|Ga0137417_1403150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1419	Open in IMG/M
3300024330\|Ga0137417_1411663	All Organisms → cellular organisms → Bacteria → Acidobacteria	2595	Open in IMG/M
3300026304\|Ga0209240_1265303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	527	Open in IMG/M
3300026320\|Ga0209131_1090780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1628	Open in IMG/M
3300026514\|Ga0257168_1040076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1016	Open in IMG/M
3300026557\|Ga0179587_10284881	Not Available	1062	Open in IMG/M
3300026557\|Ga0179587_10296819	Not Available	1040	Open in IMG/M
3300027076\|Ga0208860_1030534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	567	Open in IMG/M
3300027643\|Ga0209076_1201313	Not Available	546	Open in IMG/M
3300027671\|Ga0209588_1054235	All Organisms → cellular organisms → Bacteria → Acidobacteria	1296	Open in IMG/M
3300027846\|Ga0209180_10209846	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300027862\|Ga0209701_10091262	All Organisms → cellular organisms → Bacteria → Acidobacteria	1911	Open in IMG/M
3300027862\|Ga0209701_10143511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1462	Open in IMG/M
3300028792\|Ga0307504_10067625	Not Available	1065	Open in IMG/M
3300031231\|Ga0170824_111920908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	512	Open in IMG/M
3300031718\|Ga0307474_10191214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1556	Open in IMG/M
3300031720\|Ga0307469_10599268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	984	Open in IMG/M
3300031720\|Ga0307469_10882013	Not Available	827	Open in IMG/M
3300031962\|Ga0307479_10358581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1441	Open in IMG/M
3300031962\|Ga0307479_10496308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300031962\|Ga0307479_11047404	Not Available	783	Open in IMG/M
3300032205\|Ga0307472_101344094	Not Available	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.58%
Aquatic	Environmental → Aquatic	1.61%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.58%
Sediment	Environmental → Aquatic → Sediment	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.90%
Loam	Environmental → Terrestrial → Soil → Loam	9.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.42%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_09484730	2124908009	Soil	MIADPPTSGTRLGVGFDAGRTRTRNEAWRTTIGTRPVPARFALLPEGKKRWDRMGLSAVL
JGI12635J15846_104663911	3300001593	Forest Soil	MTLMIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARLALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFPERLDALRYSVV
JGIcombinedJ26739_1004207752	3300002245	Forest Soil	MTIMIADPPIGKTSLGVGFDASRNRSRDSEAWRRAIGTKPIPARLALLPEERKRWDRIGISALLQFLIVGFFVVMPIFFPERLEAI
Ga0005471J37259_1071091	3300002681	Forest Soil	MISMIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQIL
JGI25615J43890_10341081	3300002910	Grasslands Soil	MTLMIADPPISGTRLGIGLDANRPRARNEVWKAAIGTKPVPARLALLPEGERRWDRIGVSAVAQILALTFFVALPVFFPE
JGI25615J43890_10464091	3300002910	Grasslands Soil	MIADPPTSGMRLGVGFDAGRARVRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLS
JGI25616J43925_103627142	3300002917	Grasslands Soil	MIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRM
Ga0058900_10022001	3300004099	Forest Soil	MTLMIADPPTSGMRLGVGFDAAHARTRNEAWRTAIGTKRVPARFELLPEGEKRWNRIGVSAILQVAILSFFVVR
Ga0058900_13872301	3300004099	Forest Soil	MTLMIAEPATSGMSLGVGFDGGRFRPRNEAWRTAIGTKPVPARFDLLPEGEKRWDRIGISAILQISLLTFFVVMPVFFPERLSA
Ga0058891_14566511	3300004104	Forest Soil	MIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFVVMP
Ga0058887_12875201	3300004119	Forest Soil	MIADPPTSGMRLGVGFDAAHARTRNEAWRTAIGTKRVPARFELLPEGEKRWNRIGVSAILQVAILSFFVVMPIFFPERIEQLKYSVVPLLMPVTEVPVAP
Ga0058883_15435051	3300004137	Forest Soil	MIADPPTSGMRLGVGFDAAHARTRNEAWRTAIGTKRVPARFELLPEGEKRWNRIGVSAILQVAILSFF
Ga0070709_103466682	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIADPPTSGTRLGVGFDTSRARSRNEAWKNSIGTRPVPARLALLPEGRKRWDRVGVSAVLQIAIVTFFVVMPIFFPERLDQLKY
Ga0070709_109107571	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSTMRLGVGFDTRARARNEAWKTSIGNKQVPARFDLLPDGDKRWDRIGVSAIVQILLLTFFVVMPIFFPERI
Ga0075024_1005749882	3300006047	Watersheds	MTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKSVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPIFFPERLNALKYQV
Ga0075015_1009487301	3300006102	Watersheds	MIAEPPTTGTRLGVGFDANRSRTRNEAWKTAIGTKPVPARLALLPDGERRWDRIGASAMLQILAVAFFVSLPVFFPERLNALKY
Ga0079222_109240122	3300006755	Agricultural Soil	MPISGMRLGVGFDSRARSRNESWKNTIGTKPVPARFALLPEGEKRWDRLGVSAVLQITIVTFFVVMPIFFPERIDA
Ga0099793_104832831	3300007258	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDSRSRTRGEAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFV
Ga0099795_106535731	3300007788	Vadose Zone Soil	MTLMIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFFVVMPIFFPERIDQLKYSVVPLFMPVSE
Ga0099830_100353661	3300009088	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDANRSRTRNEAWKAAIGTKPVPARLALLPEGEKRWDRIGVSAVAQILALTFFVAMPVFFPERLSALKYQVTPLQWV
Ga0099828_102311481	3300009089	Vadose Zone Soil	MALMIADPPTSGTRLGVGFDANRPRTRNEAWKTAIGSKPVPARLALLPEGRRRWDRIGASAVMQILALTFF
Ga0099828_110504231	3300009089	Vadose Zone Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGEKRWDRIGVSAVLQILTLTFFVAMPIFFPERLSALKYQVT
Ga0105241_125985281	3300009174	Corn Rhizosphere	MTLMIADPPTSGTRLGVGFDAGRSRSRNEAWRNAIGTKPVPARLALLPDGEKRWDRVGVSAVLQVAIVTFFVVMPIFFPERLEQLKYHVT
Ga0126384_115405071	3300010046	Tropical Forest Soil	MIADPPTSSTRLGVGFDAAPRQRTRDEAWRRAIGSKPVPARLAMLPEGEKRWDRIGVSATAQILI
Ga0126351_13034941	3300010860	Boreal Forest Soil	MTLMIAEPPTSGMSLGVGFGGGRFRSRNESWRTAIGNKPVPARFDLLPEGEKRWDRIGLSAILQVSLVTFFV
Ga0126351_13127861	3300010860	Boreal Forest Soil	MTLMIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARLALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFP
Ga0126348_11663601	3300010862	Boreal Forest Soil	MTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKPVPARLALLPEGERRWDRIGVSAMLQILAVTFFVTLPIFFPERLNALKYQVTPLQWIVTEV
Ga0150983_130440182	3300011120	Forest Soil	MTLMIAEPATSGMSLGVGFDGGRFRPRNEAWRTAIGTKPVPARFDLLPEGEKRWDRIGISAILQISLL
Ga0137392_102757931	3300011269	Vadose Zone Soil	MALMIADPPTSGTRLGVGFDANRPRTRNEAWKTAIGSKPVPARLALLPEGRRRWDRIGASAVMQILALTFFVAAPIFFPERMSALKYEVTPLQWLVTEVP
Ga0137391_101759213	3300011270	Vadose Zone Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGEKRWDRIGVSAVLQILTLTFFVAMPIFFPERLSALKYSVV
Ga0137391_112817871	3300011270	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDANRSRTRNEAWKAAIGTKPVPARLALLPEGEKRWDRIGVSAVAQILALTFFVAMPVFFPERLSALKSPVTPLQ
Ga0137389_101732052	3300012096	Vadose Zone Soil	MTSMIADPPTSNMRLGVGFDANRSRARDTEAWKRSLGNNNRVTARLAMLPEGEKRWDRIGVSAVVQLLMLTFFVTMPIFFPERMSALKYEVTPLQWVVTEVPVAPTPPP
Ga0137388_102086492	3300012189	Vadose Zone Soil	MALMIADPPTSGTRLGVGFDANRPRTRNEAWKTAIGSKPVPARLALLPEGRRRWDRIGASAVMQILALTFFVAVPIFFPERMSALKYEVTPLQWLVT
Ga0137388_105286692	3300012189	Vadose Zone Soil	MRLGVGFDAKRPRTRNEAWRAAIGTKPVPARLALLPDGEKRWDRIGVSAIAQILAL
Ga0137388_109224981	3300012189	Vadose Zone Soil	MFGDLPIQATRLGVGFDANRGRSRNEGWKNSIGNKPVPARFELLPEGEKRWDRIGVSAVAQVLILTFFVVMPIFFPERLSELK*
Ga0137363_104787511	3300012202	Vadose Zone Soil	MTLMIAEPPTSGTRLGVGFDANRNRGRDEAWKRTIGSRPVPARFALLPEGEKRWDRIG
Ga0137363_108087592	3300012202	Vadose Zone Soil	MTLMIAEPPTRGTHLGVGFDANRSRTRNEAWRAAIGTKPVPARLALLPDGEKRWDRIGASAVMQILALTFFVV
Ga0137399_108305582	3300012203	Vadose Zone Soil	MISMIADQPMGGTRLGVGFDARVRSRNEAWKASIGNKQVPARFDLLPEGEKRWDRIGVSAVLQILADTFFVVMPIFFPERL
Ga0137362_101247593	3300012205	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDAGRGRIRNEAWKSTIGTKPIPARFALLPEGKKRWDRIGVSAVLQISLLTFFVVMPIFFPERIEQLKYSVVPLLMPVTEVPVAP
Ga0137360_103240792	3300012361	Vadose Zone Soil	MIANRSAGGTRLGVGFDASGPRTRNEAWKTAIGSKPVPARLALLPDGSGRWDRIGVSAVLQILGLTFFVAMPIFFPER
Ga0137360_110553991	3300012361	Vadose Zone Soil	MISMIADQPMGGTRLGVGFDARVRSRNEAWKASIGNKQVPARFDLLPEGEKRWNRIGVSAVLQI
Ga0137360_113005701	3300012361	Vadose Zone Soil	MTLMIADPPTSGMRLGVGFDAGRARVRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFF
Ga0137390_103460492	3300012363	Vadose Zone Soil	MTLMIADPPTSGTRLGIGLDANRPRARNEAWKAAIGTKPVPARLALLPEGERRWDRIGVSAVAQILALTFFVVLPIFFPERLSALKYQVTPLQWVVTE
Ga0137390_103522471	3300012363	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDANRSRTRNEAWKAAIGTKPVPARLALLPEGEKRWDRIGVSAVA
Ga0137390_109822952	3300012363	Vadose Zone Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGEKRWDRIGVS
Ga0137396_111874451	3300012918	Vadose Zone Soil	MALMIADAPTTGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGRKRWDRIGASAIMQILALTFFVAMPIFFPERMSALKYQVVPLQWIVTEV
Ga0137419_105784031	3300012925	Vadose Zone Soil	MIANRSAGGTRLGVGFDASGPRTRNEAWKTAIGSKPVPARLALLPDGSGRWDRIGVSAVLQILGLTFFVAMPIFFPERLNALKYSTVPLLMPV
Ga0137405_12852461	3300015053	Vadose Zone Soil	MTLMIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMG
Ga0137420_14537295	3300015054	Vadose Zone Soil	MTLMIADPPTSGMRLGVGFDASRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFFVVMPIFFPERIDQLKYSVVPLFYAGERDTGRPTPPHLRRSE*
Ga0137420_14755395	3300015054	Vadose Zone Soil	MTLMIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGNQAGTARFALLPKAKALGSHGLSAMLQISLVTFFWWYAIFFRNELSN*
Ga0066662_116634642	3300018468	Grasslands Soil	MTLMIADPPTSGTRLGVGFDANRARTRNEAWKNSIGTKPVPARFELLPDGRKRWDRIGVSADLQGS
Ga0179594_102317031	3300020170	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDSRSRTRGEAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAI
Ga0210407_103055341	3300020579	Soil	MTLMIAEPPTSGTRLGVGFDANRSHTRNEAWKTAIGTKRVPARLALLPDGERRWDRI
Ga0210407_106046631	3300020579	Soil	MIAEPPTSGTRLGVGFDANRSSTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVS
Ga0210401_101914441	3300020583	Soil	MTLMIADPPTSGMRLGVGFDAGGRARTRNEAWRTTIGTKQVPARFALLPEGDKRWDRIGISAVLQVSILTFFVVMPIFFPER
Ga0179596_101994981	3300021086	Vadose Zone Soil	MIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFFVVMPIFFPERIDQLKYSVVPLFMPVSEIPVAPP
Ga0210404_106060831	3300021088	Soil	MFGDLPIQATRLGVGFDANRGRSRNEGWKSGIGNKPVPARFELLPEGEKRWDRIGVSAVAQVLILTFFVVMPIFFPERLSELK
Ga0210406_105629371	3300021168	Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGRKRWDRIGASAIMQVLALTFF
Ga0210406_107449372	3300021168	Soil	MTLMIADPPTSGTRLGVGFDAGRTRTRNEAWRTTIGTRPVPARFALLPEGKKRWDRMGLSAVLQISFLTFFVVMPIFFPERIAELKYSVVPLLMP
Ga0210400_100098301	3300021170	Soil	MFGDLPIQGTRLGVGFDANRARSRNETWKSSIGNKPVPARFELLPEGEKRWDRIGVSAVAQVLILTFFVAMPIFFPERLSALKYSVVPLLMPVTE
Ga0210400_101273241	3300021170	Soil	MTLMIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARFALLPEGEKRWDRVGASAVLQIAILTFFVVMPIFFPER
Ga0210400_110591341	3300021170	Soil	MFGDLPIQGTRLGVGFDANRSRSRNEAWKGSVGNKPVPARFELLPEGEKRWDRIGASAVAQVLILTFFVAMPIFFPERLSALRYSVVPLLMPVTEVPVA
Ga0210408_105496161	3300021178	Soil	MTLMIADPPTSGMRLGVGFDAGGRARTRNEAWRTTIGTKQVPARFALLPEGDKRWDRIGISAVLQVSILTFFVVMPIFFPERLAELKYSVVP
Ga0210394_112411011	3300021420	Soil	MTLMIADPPTSGTSLGVGFGARGARTRNEAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQISLLTFFVVMPIFFPER
Ga0210409_104733271	3300021559	Soil	MTLMIADPPTSGTSLGVGFGARGARTRNEAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQISLLTFFVVMPIFFPERLDALRYSVVPLLMPVTEVPVAP
Ga0210409_112117051	3300021559	Soil	MTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPEGERRWDRIGVSAMMQILAVAFFVSLPIFFPERLDALKYQVTPLQWIVTEVPVAPP
Ga0242642_10323842	3300022504	Soil	MIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFPERLDALKYSVVPLLMPVT
Ga0242642_10853051	3300022504	Soil	MTLMMIADPPTSRTRLGVGFDGSRARSRNDAWRTAIGNKPVPARFDLLPEGDKRWNRIGASAVLHILLVTFFV
Ga0242648_10761411	3300022506	Soil	MTLMIADPPTSGTRLGVGFDANRPRTRGDAWRDAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFPERL
Ga0222729_10165131	3300022507	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQILLVTFFVVMPIF
Ga0222729_10566051	3300022507	Soil	MIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPVFFPERL
Ga0222728_10780141	3300022508	Soil	MIAEPPTSRTRLGVGFDANRSRTRNEAWKTAIGTKSVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPVFFPERLNALKYQVTPLQ
Ga0222728_10795672	3300022508	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQILLVTFFVVMPIFFPERLTALKYQVTP
Ga0222728_11232591	3300022508	Soil	MTLMIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQI
Ga0242652_10438901	3300022510	Soil	MTLMIAEPPTSGTRLGVGFDANRSHTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPV
Ga0242656_10836331	3300022525	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQILLVTFFVVMPIFFPERLTALKYQVTPLEW
Ga0242668_11573511	3300022529	Soil	MTFADPPASGTRLGVGFDANRSRTRNEAWKTAIGTKPVPARLALLPDGERCWDRIGVSAMLQILAVAFFVSLPVFFPERLNALKYQVTPLQWIVTEVPVAPPPP
Ga0242660_12358981	3300022531	Soil	MFGDLTIQGTRLGVGFDANRSRSRNEAWKGSVGNKPVPARFELLPEGEKRWDRIGVSAVAQVLI
Ga0242655_101144332	3300022532	Soil	MTLMIADPPTSGTSLGVGFGARGARTRNEAWRNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQI
Ga0242655_103171552	3300022532	Soil	MTLMIAEPSTSGMSLGVGFEGGRYRPRNEAWRTAIGTKPVPARFDLLPEGEKRWDRIGVSAILQI
Ga0242662_102181541	3300022533	Soil	MIADPPTSGTRLGVGFDAGRSRTRNEAWKTSIGTKPVPARFELLPEGKKRWDRMGVSAFLQVAILTFFVVMPIFFPERLAELKYSVVPLLMPVTE
Ga0242653_11143761	3300022712	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSA
Ga0242657_11813961	3300022722	Soil	MIADPPTSGTRLGVGFDANRPRTRGDAWRNAIGTKPVPARFALLPEGEKRWDRVGASAVLQIAILTFFVVMPIFFPERLDALKYS
Ga0242657_12306551	3300022722	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQILLV
Ga0242665_102572011	3300022724	Soil	MIADPPTSGTRLGVGFDAGRSRTRNEAWKTSIGTKPVPARFELLPEGKKRWDRMGLSAFLQVAILTFFVVMPIFFPERLDELKYSVVPLLM
Ga0242665_103279081	3300022724	Soil	MTSMFGDLPIQATRLGVGFDANRGRSRNEGWKSSIGNKPVPARFELLPEGEKRWDRIGVSAVAQVLILTFFVVMPIFFP
Ga0242654_102985801	3300022726	Soil	MTLMIAEPSTSGMSLGVGFEGGRYRSRSEAWRTAIGSKPVPARFDLLPEGEKRWDRIGVSAILQISLLIFFVALPVFFPERLSALKYSVVPLMMP
Ga0242654_103476941	3300022726	Soil	MIADPPTSGTRLGVGFDAGRSRTRNEAWKTSIGTKPVPARFELLPEGKKRWDRMGVSAFLQVAILTFF
Ga0137417_14031501	3300024330	Vadose Zone Soil	MIVDQPISGMRLGVGFDANRSRSRNEAWKSSIGNKPVPARFELLPEGEKRWNRIGVSAVAQVLILTFFVAMPIFFPERLSALKYSVV
Ga0137417_14116633	3300024330	Vadose Zone Soil	MIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFFVVMPIFFPERIDQLKYSVVPLFMQ
Ga0209240_11104931	3300026304	Grasslands Soil	MIADPPTSGMRLGVGFDAGRARVRTEAWKTTIGTKPVPARFALLPEGKKRWDR
Ga0209240_11684501	3300026304	Grasslands Soil	MTLMIADPPTSGTRLGVGFDANRGRTRNEAWKNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFV
Ga0209240_11921421	3300026304	Grasslands Soil	MTSMIADPPTSNMRLGVGFDANRSRARDTEAWKRSLGNNNRATARLAMLPEGEKR
Ga0209240_12653031	3300026304	Grasslands Soil	MIADPPTSGTRLGVGFDANRPRAQNEAWKSAIGTKPVPARLALLPEGERRWDRIGVSAVAQILALTFFVALPVFFPERLSTLKYQVTPLQWV
Ga0209131_10907801	3300026320	Grasslands Soil	MIADPPTSGTRLGVGFDANRGRTRNEAWKNAIGTKPVPARFALLPEGEKRWDRVGVSAVLQIAILTFFVVMPIFFPERLDAL
Ga0209131_12929552	3300026320	Grasslands Soil	MTLMIADPPTSGTRLGVGFDAGRGRTRNEAWKTTIGTRPVPARFALLPEGKKRWNRMGLSAVLQISILTKP
Ga0257168_10400761	3300026514	Soil	MIADPPTSGTRLGVGLDANRSRARNEAWKAAIGTKPVPARLALLPEGERRWDRIGVSAVAQILALTFFVALPVFFPERLSALKYQVTPLQWVVTEVPVAP
Ga0179587_102848812	3300026557	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDAGRGRIRNEAWKSTIGTKPIPARFALLPEGKKRWDRIGVSAVLQISLLTFFVVMPIFFPE
Ga0179587_102968191	3300026557	Vadose Zone Soil	MIADPPTSGMRLGVGFDAGRARTRTEAWKTTIGTKPVPARFALLPEGKKRWDRMGLSAMLQISLVTFFVVMPIFFPERIDQLKYSVVPLF
Ga0208860_10305341	3300027076	Forest Soil	MTLMPEPPNRGTSLGVGFDANRSRTRNEAWKTAIGTKPVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPIFFPERLNALKYQVTPLQWI
Ga0209076_12013131	3300027643	Vadose Zone Soil	MTLMIAEPPTSGTRLGVGFDANRNRGRDEAWKRTIGSRQVPARFALLPEGEKRWDRIGAIAVAQVLFVAFFVAMPIFFPERLAELKYSVVPLLMPVTEVPVAPAPPAS
Ga0209588_10542352	3300027671	Vadose Zone Soil	MTLMIADPPTSGTRLGVGFDAGRGRIRNEAWKSTIGTKPIPARFALLPEGKKRWDRIGVSAVLQISLLTFFVVMPIFFPERIEQLKYSVVPLLMPVTEV
Ga0209588_10589222	3300027671	Vadose Zone Soil	MFGNPPIKGTRLGVGFDANRTRFGNEVWKSSIGTKPVPARFELLPEGEKRWDRIGVSAVAQVLI
Ga0209180_102098462	3300027846	Vadose Zone Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGEKRWDRIGVSAVLQILTLTFFVAMPIFFPERLSALKYSVVPLLMPVTEV
Ga0209701_100912621	3300027862	Vadose Zone Soil	MTSMIADPPTSNMRLGVGFDANRSRARDTEAWKRSLGNNNRVTARLAMLPEGEKRWDRIGVSAVVQLLMLTFFVTMPIFFPERMSALKYEVTPLQWVVTEVPVAPTPP
Ga0209701_101435112	3300027862	Vadose Zone Soil	MALMIADPPTSGTRLGVGFDANRPRTRNEAWKTAIGSKPVPARLALLPEGRRRWDRIGASAVMQILALTFFVAVPIFFPERMSALKYEVTPLQWVVTEVPVAPTPP
Ga0307504_100676251	3300028792	Soil	MTLMIAEPPTSGTRLGVGFDANRNRTRDEAWKRTIGSRQVPARFALLPEGEKRWDRIGVSAVAQILFLAFFVAMPIFFPERLSALKYHVNPLTWVVTEVPVAPPP
Ga0222749_101918052	3300029636	Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGEKRWNRMGVSAVLQILLVTFFVVM
Ga0170834_1110431682	3300031057	Forest Soil	MIADPPTSGTSLGVGFGAREARTRNEAWRNAIGTKPVPARFALLPEGEKRWDRVGLSAKK
Ga0170824_1119209081	3300031231	Forest Soil	MFAEGNLREGRSGMTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPEGERRWDRIGVSAMLQILAVAFFVTL
Ga0170824_1172609712	3300031231	Forest Soil	MTLMIADPPTSGTSLGVGFGARGARTRNEAWRNAIGTKPVPARFALLPEGEKRWDRVGLS
Ga0307483_10343881	3300031590	Hardwood Forest Soil	MIADPPTSGMRLGVGFDAGGRARTRNEAWRTTIGTKQVPARFALLPEGEKRWDRIGISAVLQVSILTFFVVMP
Ga0307483_10429311	3300031590	Hardwood Forest Soil	MIADQPMGGTRLGVGFDARARSRNEAWKASIGNKQVPARFDLLPEGQKRWNRMGVSAV
Ga0307474_101912142	3300031718	Hardwood Forest Soil	MTLMMIADPPTSRTRLGVGFDGSRARSRNDAWRTAIGNKPVPARFDLLPEGDKRWNRIGASAVLQILLVTFFVVMPIFFPERLSELK
Ga0307469_105992682	3300031720	Hardwood Forest Soil	MTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVSAMLQILAVAFFVSLPVFFPERLDALKYQ
Ga0307469_108820132	3300031720	Hardwood Forest Soil	MTLMIAEPPTSGTRLGVGFDANRNRGRDEAWKRTIGSRQVPARFALLPEGEKRWDRIGASAVAQVLFVAFFVAMPIFFP
Ga0307478_108456002	3300031823	Hardwood Forest Soil	MIADPLASGTRLGVGFDANRARTRNEAWKTAIGTKPVPARLALLPEGERRWDRIGVSAMLQILTVA
Ga0307479_100701084	3300031962	Hardwood Forest Soil	MTLMIAEPSTSGMSLGVGFEGGRYRPRNEAWRTAIGTKPVPARFDLLPEGEKRWDRIGISAILQISLLIFFVA
Ga0307479_103585811	3300031962	Hardwood Forest Soil	MTLMIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVSAMLQILAVTFFVTLPIFFPERLNALKYQVT
Ga0307479_104963081	3300031962	Hardwood Forest Soil	MTLMIADPPTSGMRLGVGFDAGGRARTRNEAWRTTIGTKQVPARFALLPEGDKRWDRIGISAVLQVSILTFFVVMPIFFPERLAELKYSVVPLLMPV
Ga0307479_110474042	3300031962	Hardwood Forest Soil	MALMIADPPASGTRLGVGFDANRPRTRNEAWRAAIGTKPVPARLALLPEGRKRWDRIGASAIMQVLALTFFVAMPIFFPERLSALKYQVVPLQWIVT
Ga0307471_1007533212	3300032180	Hardwood Forest Soil	MIAEPPTSGTRLGVGFDANRSRTRNEAWKTAIGTKRVPARLALLPDGERRWDRIGVSAMLQILAVAFF
Ga0307471_1035613741	3300032180	Hardwood Forest Soil	MIADPPTTGMRLGVGFDAGGRARTRNEAWRTTIGTKQVPARFALLPEGDKRWDRIGISAV
Ga0307472_1013440941	3300032205	Hardwood Forest Soil	MTLMIADPPTSGTRLGVGFDAGRTRTRNEAWRTTIGTRPVPARFALLPEGKKRWDRMGLSAVLQISFLTFFVVMPIFFPERIA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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