NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068198

Metagenome / Metatranscriptome Family F068198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068198
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 42 residues
Representative Sequence TLEADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Number of Associated Samples 111
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.60 %
% of genes near scaffold ends (potentially truncated) 93.60 %
% of genes from short scaffolds (< 2000 bps) 90.40 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(27.200 % of family members)
Environment Ontology (ENVO) Unclassified
(19.200 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.600 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.86%    β-sheet: 0.00%    Coil/Unstructured: 67.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF13305TetR_C_33 31.20
PF01243Putative_PNPOx 16.80
PF00196GerE 13.60
PF03596Cad 4.00
PF01545Cation_efflux 4.00
PF01381HTH_3 2.40
PF02518HATPase_c 2.40
PF12697Abhydrolase_6 2.40
PF00440TetR_N 1.60
PF01546Peptidase_M20 1.60
PF00248Aldo_ket_red 1.60
PF13561adh_short_C2 0.80
PF00583Acetyltransf_1 0.80
PF13489Methyltransf_23 0.80
PF00486Trans_reg_C 0.80
PF05988DUF899 0.80
PF07687M20_dimer 0.80
PF12840HTH_20 0.80
PF00753Lactamase_B 0.80
PF08241Methyltransf_11 0.80
PF13676TIR_2 0.80
PF00202Aminotran_3 0.80
PF03881Fructosamin_kin 0.80
PF13411MerR_1 0.80
PF10041DUF2277 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 4.00
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 4.00
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 4.00
COG4300Cadmium resistance protein CadD, predicted permeaseInorganic ion transport and metabolism [P] 4.00
COG3001Fructosamine-3-kinaseCarbohydrate transport and metabolism [G] 0.80
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.00 %
UnclassifiedrootN/A12.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10099199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1157Open in IMG/M
3300004091|Ga0062387_101558307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300005366|Ga0070659_101322168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300005548|Ga0070665_100505738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1220Open in IMG/M
3300005554|Ga0066661_10394131All Organisms → cellular organisms → Bacteria → Terrabacteria group848Open in IMG/M
3300005563|Ga0068855_100782203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1015Open in IMG/M
3300005610|Ga0070763_10044688All Organisms → cellular organisms → Bacteria2086Open in IMG/M
3300005712|Ga0070764_10465005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii756Open in IMG/M
3300005921|Ga0070766_10796634All Organisms → cellular organisms → Bacteria → Terrabacteria group644Open in IMG/M
3300006052|Ga0075029_101127166Not Available546Open in IMG/M
3300006163|Ga0070715_10017406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2721Open in IMG/M
3300006172|Ga0075018_10742941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia534Open in IMG/M
3300006173|Ga0070716_100263297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1181Open in IMG/M
3300006755|Ga0079222_11784512All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006854|Ga0075425_100393857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1596Open in IMG/M
3300006903|Ga0075426_10380816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1039Open in IMG/M
3300006904|Ga0075424_101436721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae732Open in IMG/M
3300007788|Ga0099795_10169510Not Available906Open in IMG/M
3300009038|Ga0099829_10369924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1182Open in IMG/M
3300009683|Ga0116224_10056764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1909Open in IMG/M
3300009683|Ga0116224_10240029All Organisms → cellular organisms → Bacteria → Terrabacteria group865Open in IMG/M
3300009698|Ga0116216_10464788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria766Open in IMG/M
3300010359|Ga0126376_13217513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria505Open in IMG/M
3300010371|Ga0134125_10368903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1592Open in IMG/M
3300010373|Ga0134128_11802647Not Available673Open in IMG/M
3300010858|Ga0126345_1144948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1422Open in IMG/M
3300010876|Ga0126361_10991802All Organisms → cellular organisms → Bacteria → Terrabacteria group747Open in IMG/M
3300012208|Ga0137376_11219211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria642Open in IMG/M
3300012507|Ga0157342_1084952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300012957|Ga0164303_10572867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria738Open in IMG/M
3300013306|Ga0163162_10266209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1845Open in IMG/M
3300014326|Ga0157380_10546548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1135Open in IMG/M
3300014495|Ga0182015_10811016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces588Open in IMG/M
3300014968|Ga0157379_11906148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria586Open in IMG/M
3300017821|Ga0187812_1057036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1309Open in IMG/M
3300017821|Ga0187812_1132546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria806Open in IMG/M
3300017823|Ga0187818_10001735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8944Open in IMG/M
3300017823|Ga0187818_10249113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Aldersonia → unclassified Aldersonia → Aldersonia sp.776Open in IMG/M
3300017823|Ga0187818_10428561Not Available589Open in IMG/M
3300017926|Ga0187807_1055475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1229Open in IMG/M
3300017928|Ga0187806_1022242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1843Open in IMG/M
3300017932|Ga0187814_10252157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300017955|Ga0187817_10705357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia644Open in IMG/M
3300017955|Ga0187817_10840996Not Available586Open in IMG/M
3300017994|Ga0187822_10267825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia593Open in IMG/M
3300017995|Ga0187816_10070967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1476Open in IMG/M
3300018001|Ga0187815_10541799Not Available500Open in IMG/M
3300018034|Ga0187863_10580019All Organisms → cellular organisms → Bacteria → Terrabacteria group630Open in IMG/M
3300018037|Ga0187883_10183205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes1075Open in IMG/M
3300018046|Ga0187851_10286140All Organisms → cellular organisms → Bacteria → Terrabacteria group958Open in IMG/M
3300018062|Ga0187784_10283666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1346Open in IMG/M
3300018088|Ga0187771_10754347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia825Open in IMG/M
3300020062|Ga0193724_1039920All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300020150|Ga0187768_1084047Not Available720Open in IMG/M
3300021088|Ga0210404_10138318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1266Open in IMG/M
3300021180|Ga0210396_10029199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces5102Open in IMG/M
3300021181|Ga0210388_10449742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1132Open in IMG/M
3300021181|Ga0210388_10523155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1040Open in IMG/M
3300021403|Ga0210397_10290842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1197Open in IMG/M
3300021403|Ga0210397_10621694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria826Open in IMG/M
3300021406|Ga0210386_10619832Not Available934Open in IMG/M
3300021406|Ga0210386_10960658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura physcomitrii730Open in IMG/M
3300021407|Ga0210383_10926629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia741Open in IMG/M
3300021474|Ga0210390_10076372Not Available2772Open in IMG/M
3300021478|Ga0210402_11508564Not Available599Open in IMG/M
3300021479|Ga0210410_10241638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1619Open in IMG/M
3300021559|Ga0210409_10564853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1004Open in IMG/M
3300022873|Ga0224550_1020023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria945Open in IMG/M
3300024224|Ga0247673_1040446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria653Open in IMG/M
3300024279|Ga0247692_1071815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300024290|Ga0247667_1055168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium737Open in IMG/M
3300025910|Ga0207684_10069277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2998Open in IMG/M
3300025916|Ga0207663_10721630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300025937|Ga0207669_10209079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1423Open in IMG/M
3300026041|Ga0207639_12143260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300026116|Ga0207674_10591023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1072Open in IMG/M
3300026374|Ga0257146_1017628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1163Open in IMG/M
3300026496|Ga0257157_1014836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora pisi1250Open in IMG/M
3300027058|Ga0209111_1027138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria702Open in IMG/M
3300027853|Ga0209274_10306805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300027855|Ga0209693_10479566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia596Open in IMG/M
3300027889|Ga0209380_10550760All Organisms → cellular organisms → Bacteria → Terrabacteria group670Open in IMG/M
3300028773|Ga0302234_10391341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Epidermidibacterium → Epidermidibacterium keratini595Open in IMG/M
3300028793|Ga0307299_10328039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria574Open in IMG/M
3300028877|Ga0302235_10091483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1393Open in IMG/M
3300028877|Ga0302235_10202933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria873Open in IMG/M
3300028877|Ga0302235_10273131Not Available734Open in IMG/M
3300029636|Ga0222749_10837772All Organisms → cellular organisms → Bacteria → Terrabacteria group503Open in IMG/M
3300029951|Ga0311371_10074010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces5582Open in IMG/M
3300029999|Ga0311339_11396040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300030056|Ga0302181_10252201Not Available798Open in IMG/M
3300030739|Ga0302311_10090491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2499Open in IMG/M
3300031233|Ga0302307_10468632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Epidermidibacterium → Epidermidibacterium keratini639Open in IMG/M
3300031236|Ga0302324_100356181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura physcomitrii2208Open in IMG/M
3300031525|Ga0302326_11153361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura physcomitrii1071Open in IMG/M
3300031573|Ga0310915_11274379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium507Open in IMG/M
3300031680|Ga0318574_10650036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia618Open in IMG/M
3300031682|Ga0318560_10104805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1467Open in IMG/M
3300031682|Ga0318560_10715006Not Available541Open in IMG/M
3300031718|Ga0307474_10639035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia840Open in IMG/M
3300031723|Ga0318493_10669828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia581Open in IMG/M
3300031744|Ga0306918_10355933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris1136Open in IMG/M
3300031781|Ga0318547_10110453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1582Open in IMG/M
3300031781|Ga0318547_10896590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia553Open in IMG/M
3300031782|Ga0318552_10629873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium547Open in IMG/M
3300031823|Ga0307478_10120997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces2052Open in IMG/M
3300031823|Ga0307478_10684355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia859Open in IMG/M
3300031845|Ga0318511_10328728Not Available694Open in IMG/M
3300031879|Ga0306919_10765621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia743Open in IMG/M
3300031894|Ga0318522_10344267Not Available564Open in IMG/M
3300032001|Ga0306922_10600468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1166Open in IMG/M
3300032008|Ga0318562_10038886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2571Open in IMG/M
3300032054|Ga0318570_10139124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia1082Open in IMG/M
3300032055|Ga0318575_10057951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1794Open in IMG/M
3300032063|Ga0318504_10552910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium552Open in IMG/M
3300032205|Ga0307472_100819065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria852Open in IMG/M
3300032782|Ga0335082_10759554All Organisms → cellular organisms → Bacteria → Terrabacteria group831Open in IMG/M
3300032783|Ga0335079_10551556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1222Open in IMG/M
3300032783|Ga0335079_11124286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia794Open in IMG/M
3300032893|Ga0335069_12051830All Organisms → cellular organisms → Bacteria → Terrabacteria group601Open in IMG/M
3300032895|Ga0335074_10104254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3725Open in IMG/M
3300032896|Ga0335075_10743625All Organisms → cellular organisms → Bacteria → Terrabacteria group932Open in IMG/M
3300032955|Ga0335076_11653315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia529Open in IMG/M
3300033290|Ga0318519_10160153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris1263Open in IMG/M
3300033807|Ga0314866_106537All Organisms → cellular organisms → Bacteria → Terrabacteria group510Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil27.20%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment10.40%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.20%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.40%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.40%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.40%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.40%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.40%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.60%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.60%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.60%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.80%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.80%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.80%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010858Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022873Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300027058Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1009919933300003505Forest SoilDPERRADFSRRVRAFLDRQPWDRTDVPLICRCPRSRRLAG*
Ga0062387_10155830723300004091Bog Forest SoilSGVITLDPERRADFSRRVRGFLDRQPWDRTDLPLICRCLRSRRLAG*
Ga0070659_10132216823300005366Corn RhizosphereLEADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0070665_10050573833300005548Switchgrass RhizosphereLEADQRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG*
Ga0066661_1039413123300005554SoilGIITLDEGPRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLTD*
Ga0068855_10078220333300005563Corn RhizosphereRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0070763_1004468813300005610SoilDPERRADFSRRVRAFLDRQPWDRTDLPLICRCLRSRRLPG*
Ga0070764_1046500523300005712SoilDPERRADFSRRVRTFLDRQPWDRTDLPLICRCLRSTRLPG*
Ga0070766_1079663423300005921SoilQFSRRVQAFLDRQPWDQVDLPMICRCLKSTRLPG*
Ga0075029_10112716613300006052WatershedsADFTRRVRAFLDRQPWDRTDLPLICRCLRSTRRPG*
Ga0070715_1001740653300006163Corn, Switchgrass And Miscanthus RhizosphereLEPDQRAAFSRRVRSFLDRQPWDQTDVPLICRCVRSTRLTG*
Ga0075018_1074294113300006172WatershedsLGTYSGIITLEEGPRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG*
Ga0070716_10026329733300006173Corn, Switchgrass And Miscanthus RhizosphereTLGPEQRAAFSRRVAAFLDRQPWDRVDVPMICRCLRSTRLAG*
Ga0079222_1178451223300006755Agricultural SoilVVADRETLDEGPRAEFSRRVSAFLDRQPWDQIDLPLICRCLRSTRLTG*
Ga0075425_10039385743300006854Populus RhizosphereLEADQRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0075426_1038081633300006903Populus RhizosphereRRAEFSRRVRSFLDRQPWDEIDVPLICRCVRSTRLTG*
Ga0075424_10143672123300006904Populus RhizosphereRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG*
Ga0099795_1016951013300007788Vadose Zone SoilARADFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG*
Ga0099829_1036992423300009038Vadose Zone SoilVITLEPQRRTEFSQKVRAFLDRQPWDEADVPMICRCLRSTRLRGRAL*
Ga0116224_1005676443300009683Peatlands SoilEQRAAFSRRVRAFLDRQPWDQVDLPMICRCLRSTRLPG*
Ga0116224_1024002913300009683Peatlands SoilRADFSRRVRAFLDRQPWDQVDLPMICRCLRSTRLPG*
Ga0116216_1046478813300009698Peatlands SoilQRADFSRRVRAFLDRQPWDQVDLPMICRCLRSTRLPG*
Ga0126376_1321751323300010359Tropical Forest SoilIITLEPGPRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPDGAIMGG*
Ga0134125_1036890313300010371Terrestrial SoilSGIITLEADQRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPS*
Ga0134128_1180264713300010373Terrestrial SoilSGIITLEADRRAEFSRRVRAFLDRQPWNQVDLPLICRCLRSTRLPG*
Ga0126345_114494833300010858Boreal Forest SoilTLEAGPRAEFSRRVWAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0126361_1099180223300010876Boreal Forest SoilPERRADFSRRVRAFLDRQPWDRTDLPLICRCLRSRRLPG*
Ga0137376_1121921123300012208Vadose Zone SoilTLEADRRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPDGAIMGG*
Ga0157342_108495213300012507Arabidopsis RhizosphereADRRAEFSRRVRAFLDRQPWDEVDLPLICRCLRSTRLPG*
Ga0164303_1057286733300012957SoilEEGPRAEFSRRVRAFLDRQPWDQVDLPLICRSLRSTRQTD*
Ga0163162_1026620943300013306Switchgrass RhizosphereADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0157380_1054654813300014326Switchgrass RhizosphereGIITLEADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0182015_1081101633300014495PalsaLDPDRRAEFSQRARDFLDRQPWDQIDLPMICRCLRSTRLPG*
Ga0157379_1190614823300014968Switchgrass RhizosphereAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG*
Ga0187812_105703623300017821Freshwater SedimentVITLDPDQRAELTRQVRAFLDRQPWDQIDLPMTCRCVRSTRLPG
Ga0187812_113254633300017821Freshwater SedimentLGTYSGVITLEPGRRADFSRRVRAVLDRQPWESVDLPLICRCLRSRRLAG
Ga0187818_1000173533300017823Freshwater SedimentVITLDPDQRTELTRQVRAFLDRQPWDQIDLPMTCRCVRSTRLPG
Ga0187818_1024911323300017823Freshwater SedimentLAPERRADFSRRVRAFLDGQPWDRTDLPMVCRCLRSTRRPG
Ga0187818_1042856113300017823Freshwater SedimentYSGVITLDPGRRADFSRMVRAFLDRQPWDRVDLPLICRCLRSRRLPG
Ga0187807_105547513300017926Freshwater SedimentERRADFSRRVRAFLDGQPWDRTDLPMVCRCLRSTRRPG
Ga0187806_102224243300017928Freshwater SedimentDPGRRADFSRVVRAFLDQQPWDRVDLPLICRCLRSRRLGG
Ga0187814_1025215713300017932Freshwater SedimentAERRADFTRRVRAFLDRQPWDRTDLPLICRCLRSTRRPG
Ga0187817_1070535723300017955Freshwater SedimentGVITLDPERRADFSRRVRVFLDRQPWDQVDLPMICRCLRSTRLPG
Ga0187817_1084099613300017955Freshwater SedimentLDAERRADFTRRVRAFLDRQPWDRTDLPLICRCLRSTRRPG
Ga0187822_1026782513300017994Freshwater SedimentTLDPERRADFAQRVRAFLDRQPWDSVDLPLICRCLRSRRLPG
Ga0187816_1007096743300017995Freshwater SedimentITLDPERRADFAQRVRAFLDRQPWDSVDLPLICRCLRSRRLGG
Ga0187815_1054179913300018001Freshwater SedimentADFSRRVREYLDRQPWDQADLPMICRCLRSIRLIETSKKT
Ga0187863_1058001923300018034PeatlandITMDQDQRAEFSRRVRAFLDRQPWDQVDLPMTCRCLKSTRLPG
Ga0187883_1018320513300018037PeatlandTLEPDRRAEFSQRVRDFLDRQPWDEADVPLICRCLRSTRLNG
Ga0187851_1028614013300018046PeatlandYSGVITMDQDQRAEFSRRARAFLDRPPWDQVDLPMICRCLKSTRLPG
Ga0187784_1028366633300018062Tropical PeatlandTLDPGRRADFSRMVRAFLDQQPWDRVDLPLICRCLRSTRLPG
Ga0187771_1075434723300018088Tropical PeatlandGTYSGVITLDPGRRADFSRMVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0193724_103992033300020062SoilSGIITLEADQRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0187768_108404713300020150Tropical PeatlandAAFSGRARAFLDRQPWDRVDLPMICRCLRSTRLPG
Ga0210404_1013831833300021088SoilPRAEFSRRVRAFLDRQSWDQVDLPLICRCLRSARLPG
Ga0210396_1002919973300021180SoilYSGVITLDPERRADFSRRVRTFLDRQPWDRTDLPLICRCLRSRRLAG
Ga0210388_1044974233300021181SoilTLEQDQRAQFSRRVQAFLDRQPWDQVDLPMICRCLKSTRLPE
Ga0210388_1052315533300021181SoilRADFSQRARDFLDRQPWEQTDLPMICRCLRSTRLPGSTS
Ga0210397_1029084213300021403SoilERRADFSRRVRAFLDRQPWDQVDLPMICRCLRSTRLPG
Ga0210397_1062169433300021403SoilLDPERRADFSRRVRTFLDRQPWDQVDLPMICRCLRSTRLPG
Ga0210386_1061983213300021406SoilRRADFSRRVRALLDGQPWEQVDLPLICRCLRSTRLPS
Ga0210386_1096065813300021406SoilRRAEFSQRARDFLDRQPWDQIDLPMICRCLRSTRLPG
Ga0210383_1092662913300021407SoilGTYSGVITLDAERRAEFSRRVRAFLDRQPWDRTDLPLICRCLRSRRLAG
Ga0210390_1007637213300021474SoilRADPSQRARDFLDHLPWEQTDLPMICRCLRSTRLPGPTS
Ga0210402_1150856413300021478SoilADFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0210410_1024163833300021479SoilDARADFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0210409_1056485323300021559SoilRADFSRRVRAFLDRQPWDRTDLPLICRCLRSRRLPG
Ga0224550_102002313300022873SoilVITLDAEQRADFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLAG
Ga0247673_104044623300024224SoilTLEADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0247692_107181523300024279SoilLEADQRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0247667_105516813300024290SoilADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0207684_1006927753300025910Corn, Switchgrass And Miscanthus RhizosphereGIITLEADQRAGFSRRVRAFLDRQPWDRVDLPLICRCLRSTRIPD
Ga0207663_1072163033300025916Corn, Switchgrass And Miscanthus RhizosphereEADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0207669_1020907913300025937Miscanthus RhizosphereYSGIITLEADQRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0207639_1214326023300026041Corn RhizosphereITLEADQRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0207674_1059102313300026116Corn RhizosphereGVITLEPDQRAAFSRRVRSFLDRQPWDQTDVPLTCRCVRSTRLTG
Ga0257146_101762813300026374SoilAEFSRRVRAFLDRQPWDRIDLPLICRCLRSTRLPR
Ga0257157_101483613300026496SoilRRADFSRRVRAFLDRQPWDRTDLPLICRCLRSTRLAR
Ga0209111_102713823300027058Forest SoilCQSRAAPDLADRRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLPG
Ga0209274_1030680533300027853SoilGVITLEDDQRADLTGQVSAFLDRQPWDRVDLPMICRCLRSTRLPG
Ga0209693_1047956613300027855SoilITLDAERRAEFSRRVRAFLDRQPWDRTDLPLICRCLRSRRLAG
Ga0209380_1055076023300027889SoilQRAQFSRRVQAFLDRQPWDQVDLPMICRCLKSTRLPG
Ga0302234_1039134113300028773PalsaITMDPDQRAEFSRRVRAFLDLQPWDQVDLPMICRCLKSTRLPG
Ga0307299_1032803913300028793SoilITLETDQRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0302235_1009148313300028877PalsaTYSGVITMDPDQRAEFSRRVRAFLDRQPWDQVDLPMICRCLKSTRLPG
Ga0302235_1020293333300028877PalsaTYSGVITLDAERRADFSRRVRAFLDRQPWDRTDLPLISRCLRSTRLAG
Ga0302235_1027313123300028877PalsaMTKDDLLGMLGTDSGVITLEPGSRAGLIRRVQDWLDRQPWEQADPPLICRCLRSSRLPG
Ga0222749_1083777213300029636SoilLGTYSGIITLEADKRAEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLTD
Ga0311371_1007401013300029951PalsaGVITLDAEQRADFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLAG
Ga0311339_1139604013300029999PalsaMTKDDLLGMLGTDSGVITLEPGSRAGLIRRVQDWLDRQPREQADPPLICRCLRSSRLPG
Ga0302181_1025220123300030056PalsaVITLDPGRRAEFSGRAGDFLDRQPWEETDLPMICRCLRSTRLPDS
Ga0302311_1009049113300030739PalsaLGTYSGVITLDAERRADFSRRVRAFLDRQPWDRTDLPLISRCLRSTRLAG
Ga0302307_1046863213300031233PalsaGTYSGVITMDQDQRAGFSRRIRAFLDRQPWDQVDLPMICRCLKSRRLPG
Ga0302324_10035618143300031236PalsaLGTYSGVITLHPDRRAEFSQQARDFLDRQPWDQVDLPMICRCLRSTRLPD
Ga0302326_1115336133300031525PalsaDHDRRAEFSQRARDFLDRQPWDQIDLPMICRCLRSTRLPG
Ga0310915_1127437923300031573SoilLEAGRRAEFSRRVRAFLDHQPWDRVDLPLICRCLRSTRLPG
Ga0318574_1065003623300031680SoilGRRADFTGRATAFLDRQPWDRVDLPMICRCLRSTRLPG
Ga0318560_1010480513300031682SoilRAEFSRRVRAFLDHQPWDRVDLPLICRCLRSTRLPG
Ga0318560_1071500623300031682SoilGRRAEFSRRVRAFLDHQLWDRVDLPLICRCLRSTRLPG
Ga0307474_1063903513300031718Hardwood Forest SoilYSGVITLDPERRADFSRRVGAFLDRQPWDRTDLPLICRCLRSTRLAG
Ga0318493_1066982823300031723SoilTYSGVITLDPGRRADFTGRARAFLDRQPWDRVDLPMICRCLRSTRLPG
Ga0306918_1035593313300031744SoilEAGRRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0318547_1011045333300031781SoilSGVITLDPERRADFTRRVRAFLDRQPWDRTDLPLICRCLRSTRRPG
Ga0318547_1089659023300031781SoilIITLEAGRRAEFSRRVRAFLDHQPWDRVDLPLICRCLRSTRLPG
Ga0318552_1062987323300031782SoilLEAGRRAEFSRRVRAFLNHQPWDRVDLPLICRCLRSTRLPG
Ga0307478_1012099733300031823Hardwood Forest SoilTLDPERRADFSRRVRAFLDRQPWDRTDLPLICRCLRSTRLPG
Ga0307478_1068435523300031823Hardwood Forest SoilTLDPARRADFSQRARDFLDSQPWEQTDLPMICRCLRSTRLPGSTS
Ga0318511_1032872813300031845SoilVITLDAGRRADFSPRVRAFLDRQTWDRTDLPLICRCLRSTRRPG
Ga0306919_1076562113300031879SoilGRRADFTGRARAFLDRQPWDRVDLPMACRCLRSTRLPG
Ga0318522_1034426713300031894SoilAEFSRRVRAFLDHQPWDRVDLPLICRCLRSTRLPG
Ga0306922_1060046813300032001SoilTLDPERRADFTRRVRAFLDRQPWDRTDLPLICRCLRSTRRPG
Ga0318562_1003888613300032008SoilTLEAGPRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0318570_1013912413300032054SoilVITLDAERRADFAGRARAFLGRQPWDRVDLPMICRCLRSTRLPG
Ga0318575_1005795133300032055SoilITLEAGPRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0318504_1055291023300032063SoilTLEAGRRAEFSRRVRAFLDHQPWDRVDLPLICRCLRSTRLPG
Ga0307472_10081906523300032205Hardwood Forest SoilYSGIITLETDQRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0335082_1075955413300032782SoilGPRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0335079_1055155623300032783SoilVITLEPEQRAEFSRRVTAFLDRQPWDQVDLPMICRCLRSTRLPG
Ga0335079_1112428613300032783SoilADFSRRVRAFLDGQPWDRTDLPLICRCLRSRRLPG
Ga0335069_1205183013300032893SoilTEFSRRVRAFLDRQPWDQVDLPLICRCLRSTRLAA
Ga0335074_1010425413300032895SoilPQRRADFSRRVRAFLDRQRWDRTDLPLICRCLRSTRLDG
Ga0335075_1074362523300032896SoilTLDPERRADFSRRVRAFLDGQPWDRTDLPMICRCLRSTRRLG
Ga0335076_1165331523300032955SoilPGQRAEFSRRVTAFLDRQPWDQVDLPMICRCLRSTRQPG
Ga0318519_1016015333300033290SoilLLGTYSGIITLEAGRRAEFSRRVRAFLDRQPWDRVDLPLICRCLRSTRLPG
Ga0314866_106537_9_1433300033807PeatlandVITLDTGRRADFTRRVRAFLDRQPWERTDLPLICRCLRSTRLPG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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