NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068107

Metagenome / Metatranscriptome Family F068107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068107
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 90 residues
Representative Sequence ALKPLFQTHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGKWF
Number of Associated Samples 113
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.67 %
% of genes near scaffold ends (potentially truncated) 89.60 %
% of genes from short scaffolds (< 2000 bps) 88.00 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(14.400 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.400 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.43%    β-sheet: 0.00%    Coil/Unstructured: 49.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF09084NMT1 22.40
PF10604Polyketide_cyc2 4.00
PF13379NMT1_2 3.20
PF13343SBP_bac_6 3.20
PF01977UbiD 2.40
PF02800Gp_dh_C 2.40
PF09859Oxygenase-NA 2.40
PF00378ECH_1 1.60
PF00903Glyoxalase 1.60
PF03601Cons_hypoth698 0.80
PF02371Transposase_20 0.80
PF02376CUT 0.80
PF05977MFS_3 0.80
PF10150RNase_E_G 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 22.40
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 22.40
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 2.40
COG0057Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenaseCarbohydrate transport and metabolism [G] 2.40
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.80
COG2855Uncharacterized membrane protein YadS, UPF0324 familyFunction unknown [S] 0.80
COG3547TransposaseMobilome: prophages, transposons [X] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.00 %
UnclassifiedrootN/A4.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_6466_length_1668_cov_10.728417All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1700Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_10901528All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium790Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101551176All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300000574|JGI1357J11328_10204156All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300000890|JGI11643J12802_11072226All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium955Open in IMG/M
3300000956|JGI10216J12902_120264827All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium527Open in IMG/M
3300002485|C687J35088_10113128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium810Open in IMG/M
3300003993|Ga0055468_10263654All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M
3300003996|Ga0055467_10141501All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300003996|Ga0055467_10265912All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300003997|Ga0055466_10246970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium537Open in IMG/M
3300003999|Ga0055469_10173696All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium663Open in IMG/M
3300004157|Ga0062590_102257693All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300004463|Ga0063356_104113619All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium626Open in IMG/M
3300004643|Ga0062591_100615036All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300005294|Ga0065705_10666912All Organisms → cellular organisms → Bacteria → Proteobacteria669Open in IMG/M
3300005340|Ga0070689_101097562All Organisms → cellular organisms → Bacteria → Proteobacteria711Open in IMG/M
3300005366|Ga0070659_100237172All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1508Open in IMG/M
3300005468|Ga0070707_100759509All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium933Open in IMG/M
3300005518|Ga0070699_101161726All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium708Open in IMG/M
3300005518|Ga0070699_101829033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium556Open in IMG/M
3300005535|Ga0070684_102355871All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → Thioalkalivibrio thiocyanoxidans502Open in IMG/M
3300005569|Ga0066705_10072990All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1984Open in IMG/M
3300005574|Ga0066694_10005670All Organisms → cellular organisms → Bacteria → Proteobacteria5119Open in IMG/M
3300005577|Ga0068857_102184012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300005886|Ga0075286_1000828All Organisms → cellular organisms → Bacteria4065Open in IMG/M
3300005888|Ga0075289_1000756All Organisms → cellular organisms → Bacteria4301Open in IMG/M
3300006169|Ga0082029_1364335All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300006844|Ga0075428_100609816All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300006845|Ga0075421_101518952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium732Open in IMG/M
3300006845|Ga0075421_101610929All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium706Open in IMG/M
3300006846|Ga0075430_101273788All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium605Open in IMG/M
3300006846|Ga0075430_101382701All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium579Open in IMG/M
3300006847|Ga0075431_100426672All Organisms → cellular organisms → Bacteria → Proteobacteria1324Open in IMG/M
3300006853|Ga0075420_100615627All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium937Open in IMG/M
3300006853|Ga0075420_101117703All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium677Open in IMG/M
3300006854|Ga0075425_103035097All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium513Open in IMG/M
3300006880|Ga0075429_100442108All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300006880|Ga0075429_100960175All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium747Open in IMG/M
3300006904|Ga0075424_101001623All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300006954|Ga0079219_10055383All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1732Open in IMG/M
3300006969|Ga0075419_10136604All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300007004|Ga0079218_12666909All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium595Open in IMG/M
3300007076|Ga0075435_101453581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300007076|Ga0075435_101616885All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium568Open in IMG/M
3300009053|Ga0105095_10559071All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium636Open in IMG/M
3300009087|Ga0105107_10800767All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium655Open in IMG/M
3300009610|Ga0105340_1102540All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1150Open in IMG/M
3300010037|Ga0126304_11013285All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium566Open in IMG/M
3300010040|Ga0126308_10829671All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium641Open in IMG/M
3300010303|Ga0134082_10210923All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium797Open in IMG/M
3300010320|Ga0134109_10012282All Organisms → cellular organisms → Bacteria2491Open in IMG/M
3300010323|Ga0134086_10356179All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium580Open in IMG/M
3300010333|Ga0134080_10271549All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium753Open in IMG/M
3300010397|Ga0134124_12949302All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium520Open in IMG/M
3300010399|Ga0134127_10188958All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1906Open in IMG/M
3300011429|Ga0137455_1184710All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium623Open in IMG/M
3300011437|Ga0137429_1141997All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium743Open in IMG/M
3300011441|Ga0137452_1323216All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium513Open in IMG/M
3300011445|Ga0137427_10458362All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300011445|Ga0137427_10475214All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300012204|Ga0137374_10016152All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium8582Open in IMG/M
3300012206|Ga0137380_11611841All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium533Open in IMG/M
3300012210|Ga0137378_11110614All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium705Open in IMG/M
3300012210|Ga0137378_11141880All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium694Open in IMG/M
3300012350|Ga0137372_10125880All Organisms → cellular organisms → Bacteria2119Open in IMG/M
3300012353|Ga0137367_10141299All Organisms → cellular organisms → Bacteria1760Open in IMG/M
3300012359|Ga0137385_11654627All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium504Open in IMG/M
3300012360|Ga0137375_11418650All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300012501|Ga0157351_1025206All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium659Open in IMG/M
3300012517|Ga0157354_1028787All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium695Open in IMG/M
3300012930|Ga0137407_11610042All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium618Open in IMG/M
3300014267|Ga0075313_1051372All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium967Open in IMG/M
3300015254|Ga0180089_1086409All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium648Open in IMG/M
3300015373|Ga0132257_102058622All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium737Open in IMG/M
3300015373|Ga0132257_103706388All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium556Open in IMG/M
3300015374|Ga0132255_103528000All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium665Open in IMG/M
3300018028|Ga0184608_10032998All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1960Open in IMG/M
3300018073|Ga0184624_10164596All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium980Open in IMG/M
3300018076|Ga0184609_10157391All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1048Open in IMG/M
3300018083|Ga0184628_10083911All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1628Open in IMG/M
3300018429|Ga0190272_12565464All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium557Open in IMG/M
3300018465|Ga0190269_10490601All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium794Open in IMG/M
3300018466|Ga0190268_11478362All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium589Open in IMG/M
3300018481|Ga0190271_10225330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1888Open in IMG/M
3300019377|Ga0190264_10037236All Organisms → cellular organisms → Bacteria1834Open in IMG/M
3300025165|Ga0209108_10231373All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium946Open in IMG/M
3300025917|Ga0207660_10616435All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium884Open in IMG/M
3300025917|Ga0207660_11703257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium507Open in IMG/M
3300025931|Ga0207644_11019543All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium695Open in IMG/M
3300025936|Ga0207670_11368490All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium601Open in IMG/M
3300025936|Ga0207670_11545895All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium564Open in IMG/M
3300026317|Ga0209154_1005667All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6444Open in IMG/M
3300026323|Ga0209472_1004330All Organisms → cellular organisms → Bacteria7668Open in IMG/M
3300026325|Ga0209152_10327524All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium580Open in IMG/M
3300026333|Ga0209158_1154158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium838Open in IMG/M
3300026535|Ga0256867_10061689All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1494Open in IMG/M
3300026552|Ga0209577_10462907All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium873Open in IMG/M
3300027533|Ga0208185_1157456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium522Open in IMG/M
3300027614|Ga0209970_1063807All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium678Open in IMG/M
3300027691|Ga0209485_1003718All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3079Open in IMG/M
3300027765|Ga0209073_10049750All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1372Open in IMG/M
3300027840|Ga0209683_10147046All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1076Open in IMG/M
3300027880|Ga0209481_10476046All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium644Open in IMG/M
3300027909|Ga0209382_11180903All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium784Open in IMG/M
3300027952|Ga0209889_1060138All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium786Open in IMG/M
3300028420|Ga0210366_10112694All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium963Open in IMG/M
3300030006|Ga0299907_10522314All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium935Open in IMG/M
3300030620|Ga0302046_11225775All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium589Open in IMG/M
(restricted) 3300031150|Ga0255311_1054980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium840Open in IMG/M
3300031562|Ga0310886_10972340All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300031716|Ga0310813_10083610All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2442Open in IMG/M
3300031754|Ga0307475_10551603All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium924Open in IMG/M
3300031912|Ga0306921_11039755All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium922Open in IMG/M
3300032076|Ga0306924_10259998All Organisms → cellular organisms → Bacteria → Proteobacteria1994Open in IMG/M
3300032157|Ga0315912_11005984All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium662Open in IMG/M
3300032180|Ga0307471_100255442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1808Open in IMG/M
3300032829|Ga0335070_10584284All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1052Open in IMG/M
3300033413|Ga0316603_10690304All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium953Open in IMG/M
3300034178|Ga0364934_0426723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium502Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere14.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.20%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.40%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.20%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.20%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.40%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.40%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.40%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.40%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.60%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.60%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.60%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.60%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.60%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.80%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.80%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.80%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.80%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.80%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000574Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 mEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002485Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028420Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_029804602140918013SoilHGPAVAGEQAGRAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVAQHMLSGAYASFGKTRMVERNINHFLTGR
ICChiseqgaiiFebDRAFT_1090152823300000363SoilWLAALKPLFENHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKAGRKSRDEVTQHMQSGHYAGLGKTRMVERNINQFLTGGWF*
INPhiseqgaiiFebDRAFT_10155117623300000364SoilPLCEMHYKQLVPGHGPAVDGEQTGREYFKRMYGYLEDFHGHLLEIKSGHRSADEVADHMLSGDYASLGKTRMVRRNIQQFLTGKWY*
JGI1357J11328_1020415623300000574GroundwaterFQTHYKHLVPGHGPTVDGEQAGNAYFKKMYDYLEDFYGNLQEIKSESKSKEEIIKHMQSGAYGALGKTRMVERNIDQFLTGKWY*
JGI11643J12802_1107222623300000890SoilFFGNIPNWLTALKPLFESHYRQLLPGHGPAVAGEQAGRAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVAQHMLSGAYASFGKTRMVERNINHFLTGRWF*
JGI10216J12902_12026482713300000956SoilTFFGNIPNWLQSLKPLCEMHYKQLVPGHGPAVDGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVAYHMLSGNYASLGKTRKVRRNIQQFLTGSWY*
C687J35088_1011312823300002485SoilALKPLFESHYKQLVPGHGPAVEGEKAGRAYFKKMYDYLEDFYGHAVEVKAGRESAEEAAKHMMSGVYASLGKTRMVQRNINHFLTGRWF*
Ga0055468_1026365423300003993Natural And Restored WetlandsFQTHYKQLLPGHGPKVEGQQAGRAYFKKMYDYLEDFYAHLQEIKSGRKSAQDVAEYMMSGVYASLGKTRMVERNIHQFLTGRWY*
Ga0055467_1014150123300003996Natural And Restored WetlandsLYTEVHPVTFFGNIPNWLAALKPLFENHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKAGRKSRDEVTQHMQSGHYAGLGKTRMVERNINQFLTGRWF*
Ga0055467_1026591213300003996Natural And Restored WetlandsFGNIPNWLAALRPLLQNRYKQLVPGHGPTVEGEQAGQGYFKRMYEYLEDFHDHLQEIKTGRKTREEVAEHMLAGGYSSLGKTRMVERNINQFLTGGWY*
Ga0055466_1024697013300003997Natural And Restored WetlandsPNWLAALRPLLQNRYKQLVPGHGPTVEGEQAGQGYFKRMYEYLEDFHDHLQEIKTGRKTREEVAEHMLAGGYSSLGKTRMVERNINQFLTGGWY*
Ga0055472_1026701313300003998Natural And Restored WetlandsPAVEGEQVGRSYFKKMYDYLEDFYGNLEEIKSGRKTREDVAKHMLSGVYAGLGKTRMVERNINHFLTGKWF*
Ga0055469_1017369613300003999Natural And Restored WetlandsYQTLVPGHGPTVEGEQEGRAYFQGMYNYLEDFYGQLQEIKAGRKSTEEAAQHMLSGVYARFGKTRMVQRNINHFLTGRWF*
Ga0062590_10225769323300004157SoilYTEVHPVTFFGNIPNWLTALTPLLECHYRQLIPGHGPAVDGEHAGRAYFKRMHDYLEDFYGRLMEINSGRASREEVARHMQSGAYATLGKNRMVERNINQFLTGKWF*
Ga0063356_10411361913300004463Arabidopsis Thaliana RhizosphereTEVHPVTFFGNIPNWLTALKSLFESHYKQLLPGHGPAVEGEQAGKAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVARHMVSGAYASFGKTRMVQRNINHFLTGRWF*
Ga0062591_10061503623300004643SoilGDLLYTEVHPVTFFGNIPNWLTALKPLFESHYRQLLPGHGPAVAGEQAGRAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVAQHMLSGAYASFGKTRMVERNINHFLTGR*
Ga0065704_1021238523300005289Switchgrass RhizosphereAVDGEQTGREYFKKMDDYLEDLHGHLLEIKSGRRSADKVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0065705_1066691223300005294Switchgrass RhizosphereNWLTALKPLFQTHYKQLVPGHGPAVEGEQAGNSYFKKMHDYLEDFYSNLEEIKSGRKNRDEVAKHMQSGHYAGLGKTRMVERNINQFLTGRWT*
Ga0070689_10109756223300005340Switchgrass RhizosphereTFFGNIPNWLIALKPLFDSHYKKLVPGHGPTVDDEQTGRRYFKKMYDYLEDFHGHLQEIKSGRESTDEVAKHMLGGTYAGLGKTRMVERNINQFLTGKWY*
Ga0070659_10023717223300005366Corn RhizosphereLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0070707_10075950923300005468Corn, Switchgrass And Miscanthus RhizosphereALKPLFQNHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGKWF*
Ga0070699_10116172613300005518Corn, Switchgrass And Miscanthus RhizosphereGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGKWF*
Ga0070699_10182903313300005518Corn, Switchgrass And Miscanthus RhizosphereETHYKQLIPGHGPAIEGEKQGRAYFKKMYDYLEDFHGHLLEIKSGRKSADEVAAHMMSGAYSVLGKTRMVQRHINQFLTGKRY*
Ga0070684_10235587113300005535Corn RhizosphereVTFFGNIPNWLSSLKTLFDSHYKQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0066705_1007299033300005569SoilHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRAEAAKHMLSGSYAGLGKTRMVERNINQFLTGKWF*
Ga0066694_1000567083300005574SoilKQLVPGHGPTVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0068857_10218401213300005577Corn RhizosphereKKLVPGHGPTVDDEQTGRRYFKKMYDYLEDFHGHLQEIKSGRESTDEVAKHMLGGTYAGLGKTRMVERNINQFLTGKWY*
Ga0075286_100082813300005886Rice Paddy SoilPAVQGEQAGRDYFKKMHDYLEDFHGHLEEIKSGRKTREEVAKHMLSGTYAGLGKTRMVERNINQFLTGRWF*
Ga0075289_100075613300005888Rice Paddy SoilHGPAVQGEQAGRDYFKKMHDYLEDFYGNLKEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGRWF*
Ga0082029_136433513300006169Termite NestSHYRQLLPGHGPAVAGEEAGRAYCKKMYDYLEDFHGRMVEVKAGRQNAEDVARHMLSGAYASFGKTRMVERNINHFLTGRWF*
Ga0075428_10060981633300006844Populus RhizosphereGHGPAVDGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSTDEVADYMLSGNYAGLGKTRMVRRNIQQFLTGKWY*
Ga0075421_10151895213300006845Populus RhizosphereETHYKHLVPGHGPTVEGEQSGMAYFKRTHDYLEDFHGHLEELKFDRKSESEVAQHMQSGAYAALGKSRMVERNINHFLTERWF*
Ga0075421_10161092923300006845Populus RhizosphereEVHPVTFFGNIPNWLTALKPLFESHYRQLLPGHGPAVAGEQAGRAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVAQHMLSGAYASFGKTRMVERNINHFLTGRWF*
Ga0075430_10127378823300006846Populus RhizosphereYTALFETHYKHLVPGHGSTVEGEQSGMAYFKRTHDYLEDFHGHLEELKFGRKSESEVAQHMQSGAYAALGKSRMVERNINHFLTERWF*
Ga0075430_10138270123300006846Populus RhizosphereHPVTFFGNIPNWLQSLKPLCEMHYKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLGGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0075431_10042667233300006847Populus RhizosphereFGNIPNWLQSLKPLCEMHYKQLVPGHGPAVDGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYAGLGKTRMVRRNIQQFLTGKWY*
Ga0075420_10061562723300006853Populus RhizosphereKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLGGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0075420_10111770313300006853Populus RhizosphereTFFGNIPNWLTAIKPLFQTHYKHLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVVKHMQAGNYTGLGKTRMVERNINQFLTGRWF*
Ga0075425_10303509713300006854Populus RhizosphereALKPLFQTHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGKWF*
Ga0075429_10044210833300006880Populus RhizosphereEMHYKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLGGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0075429_10096017523300006880Populus RhizosphereEMHYKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRKSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0075424_10100162323300006904Populus RhizosphereWLTALKPLFQNHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGKWF*
Ga0079219_1005538343300006954Agricultural SoilLFDSHYEQLVPGHGPAVAGEQSGRAYFKKMYDYLEDFYGHLQEIKAGRENGEKVAQHMLGGAYANLGKTRMVQRNIDQFLTGRWF*
Ga0075419_1013660433300006969Populus RhizosphereEVHPVTFFGNIPNWLQSLKPLFESHYKQLVPGHGPAVEGEQMGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYVSLGKTRMVRRNIQQFLTGKWY*
Ga0079218_1266690913300007004Agricultural SoilLKPLFQSHYKQLVPGHGPAVEGEQSGQSYFKKMYDYLEDFYGNVQEVKSGRKSPREVAAHMSSGAYASLGKTRMIERNINQFLTGRWY*
Ga0075435_10145358123300007076Populus RhizosphereWLTSIKPLFETHYKQLVPGHGPAVEGEKRGRAYFKKMYDYLEDFHGNLLEIKSGRKSADEVAAHMMSGAYSVLGKTRMVQRNIHQFLTGKRY*
Ga0075435_10161688513300007076Populus RhizosphereKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRKSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0105095_1055907123300009053Freshwater SedimentNIPNWLTALKPLFEYRYKQLIPGHGPAVEGEQAGRAYFKRMHDYLEDFYGQLQEIKSGRKSKQEIVQLMQSGVYSNLGKNRMVERNINQFLTGKWY*
Ga0105107_1080076713300009087Freshwater SedimentNIPNWLTALKPLFKYRYKQLIPGHGPAVEGEQAGRAYFKRMHDYLEDFYGQLQEIKSGRKSKEEIVQLMQSGAYSNLGKTRMVERNINQFLSGKWY*
Ga0075423_1107410813300009162Populus RhizospherePSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0105340_110254013300009610SoilLFATHYKHLVPGHGPTVEGEQSGMAYFKRTHDYLEDFHGHLEELKFDRKSESEVAQHMQSGAYAALGKSRMVERNINHFLTERWF*
Ga0126304_1101328513300010037Serpentine SoilDLLYTEVHPVTFFGNIPNWLTALKPLFECHYRQLIPGHGPAVDGEHAGRAYFKRMHDYLEDFYGHLMEIDSGRKSRAEVTQHMQNGAYASLGKTRMVERNIDQFLTGKWY*
Ga0126308_1082967113300010040Serpentine SoilIPNWLTALKPLFECHYRQLIPGHGPAVDGEHAGRAYFKRMHDYLEDFYGHLMEIDSGRKSRAEVTQHMQNGAYASLGKTRMVERNIDQFLTGKWY*
Ga0134082_1021092313300010303Grasslands SoilTEVHPVTFFGNIPNWLTALKPLFQSHYKQLVPGHGPAVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0134109_1001228213300010320Grasslands SoilFFGNIPNWLTALKPLFQSHYKQLVPGHGPTVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0134086_1035617913300010323Grasslands SoilDLDKQLVPGHGPTVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0134080_1027154933300010333Grasslands SoilVTFFGNIPNWLTSLKVLFGTRYKQLVPGHGPVVEGQKAGREYFKKMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0134124_1294930223300010397Terrestrial SoilEIRYRQLVPGHGPAVEGEQNGRAYFKRMYDYLEDFHGRLLEIESGRKSAEEVAAYMQRGSYAGLGKNRMVQRNINQFLTGKWY*
Ga0134127_1018895813300010399Terrestrial SoilLVPGHGPAVDGEQAGRNYFKKMHDYLEDFQGNLEEIKAGRKSRDEVAEHMRTGLYAGLGKTRMVERNINQFLTGRWY*
Ga0137455_118471013300011429SoilNWLTALKPLVGCRYKQLIPGHGPAVDGEQSGRACFKRMHDYLEDFYGQLVEIDSGRTSGDEVAAHMQSGAYAKLGKTQMVERNINQFLTGRWF*
Ga0137429_114199723300011437SoilKPLFEFHYKQLIPGHGPAVDGEQAGKAYFKRMHDYLEDFYGQLQELKSGRKSKEEIVQLMQSGAYSNLGKTRMVERNINQFLTGKWY*
Ga0137452_132321613300011441SoilLYTEVHPVTFFGNIPNWLTALKPLFEFHYKQLIPGHGPAVDGEQSGRTCFKRMHDYLEDFYGHLVEIDSGRTSREEVARHMQSGAYAKLGKTRMVERNINQFLTGRWF*
Ga0137427_1045836213300011445SoilIPNWLAALKPLFDCHYKQLIPGHGPAVDGEQSGRACFKRMHDYLEDFYGHLVEIDSGRTNREEVARHMQSGAYAKLGKTRMVERNINQFLTGRWF*
Ga0137427_1047521423300011445SoilGHGPTVEGEQSGMAYFKRTHDYLEDFHGHLEELKFDRKSESEVAQHMQSGAYAALGKSRMVERNINHFLTERWF*
Ga0137374_1001615283300012204Vadose Zone SoilMESTIHHMPNWLTALKQLFENRYKHLVPGHGPTVEGEQAGRTYFKKMYDYLEDFHGNLQEIRAGRKSRDDVAKHMLGGAYAPLGKTRMVKRNINQFLTGKWY*
Ga0137380_1161184113300012206Vadose Zone SoilFGNIPNWLQSLKPLFESHYKQVVPGHGPAVEGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0137378_1111061413300012210Vadose Zone SoilPVTFFGNIPNWLTALKPLFQSHYKQLVPGHGPTVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY*
Ga0137378_1114188023300012210Vadose Zone SoilMESTIHHMPNWLTALKQLFENRYKHLVPGHGPTVEGEQAGRTYFKKMYDYLEDFHGNLQEIRAGRKSRDDVAKHMLGGAYAPLGKTRMVKRNINQFL
Ga0137372_1012588033300012350Vadose Zone SoilMAVLYTEVHPVTFFGNIPNWLQSLKPLFESHYKQVVPGHGPAVEGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0137367_1014129933300012353Vadose Zone SoilMAVLYTEVHPVTFFGNIPNWLQSLKPLFESHYKQVVPGHGPAVEGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRRADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY*
Ga0137385_1165462713300012359Vadose Zone SoilTALKPLFQNHYKQLVPGHGPAVEGEQAGRSYFKKMHNYLEDFYGNLEEIKSGRKSRDEVAKHMLSGSYAGLGKTRMVERNINQFLTGRWF*
Ga0137375_1141865023300012360Vadose Zone SoilGHGATVEGEQTGRTYFKKMYDYLEDFHGNLQEIKSGRKSRDDVAKHMLSGTYGVLGKTRMVERNINQFLTGRRF*
Ga0157351_102520623300012501Unplanted SoilIAGDLLYTEVHPVTFFGNIPNWLSSLKTLFDSHYKQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0157354_102878713300012517Unplanted SoilAGDLLYTEVHPVTFFGNIPNWLSSLKTLFDSHYNQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0137407_1161004223300012930Vadose Zone SoilFFGNIPNWLQSLKPLFEMHYKQLVPGHGPAVDNEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSAGEVADHMLSRNYASLGKTRMVRRNIQQFLTGKWY*
Ga0157307_118013113300013096SoilPSVDGEQRGRAYFRKMHDYLEDFYGHLLEIKAGRETSDLVAQHMLSGPYASLGKTRMVERNINQFLTGKWF*
Ga0075313_105137223300014267Natural And Restored WetlandsVPGHGPTVEGGQAGRAYFKKMYDYLEDFYAHVQEIKAGRKSTDEVAHYMLSGPYAAFGKTRMVRRNISHFLTGRWF*
Ga0180089_108640923300015254SoilLKPLFESHYKQLVPGHGPAVEGEKAGRAYFKKMYDYLEDFYGHAVEVKAGRESAEEAAKHMMSGAYASLGKTRMVQRNINHFLTGRWF*
Ga0132257_10205862223300015373Arabidopsis RhizosphereFDSHYKQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF*
Ga0132257_10370638823300015373Arabidopsis RhizosphereVPGHGPAVDGEPSGRAYFKRMYDYLEDFYGHLQEIKAGRETSDLVAQHMLSGPYVSLGKTRMVERNINQFLTGKWF*
Ga0132255_10352800013300015374Arabidopsis RhizosphereVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLQEIKAGRESSDELAQHMLSGSYRSLGKTRMVQRNINQFLTGKWF*
Ga0184608_1003299813300018028Groundwater SedimentKPLFESHYKHLVPGHGPTVEGEKAGRTSFKKMYDYLEDFHGNLQEIKSGRKSRDDVAKHMLSGTYGVLGKTRMVERNINQFLTGRRF
Ga0184624_1016459613300018073Groundwater SedimentNIPNWLQSLKPLFEMHYKQLVPGHGPAVDDEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY
Ga0184609_1015739113300018076Groundwater SedimentVHPVTFFGNIPNWLTALKPLFENHYKHLVPGHGPTVDGEQAGRTYFKKMYDYLEDFHGNLQEIKSGRKSRDDVARHMQSGAYAPLGKTRMVERNINQFLTGRWY
Ga0184628_1008391113300018083Groundwater SedimentGPAVDGEQSGRTCFKRMHDYLEDFYGHLVEIDSGRTNREEVARHMQSGAYAKLGKTRMVERNINQFLTGRWF
Ga0190272_1256546413300018429SoilTFFGNIPNWLTALKPLFECHYKQLIPGHGPAVDGEQSGRTYFKRMHDYLEDFYGHLAEIDSGRTSREEVARHMQSGAYAKLGKTRMVERNINQFLTGRWF
Ga0190269_1049060123300018465SoilLKPLFESHYKQLVPGHGPAVEGEQTGREYFKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYASLGKTRMVRRNIQQFLTGKWY
Ga0190268_1147836223300018466SoilLFESHYKQLLPGHGPAVQGEQAGRAYFKKMYDYLEDFHGRMVEVKAGRQNAEDVARHMLSGAYASFGKTRMVQRNINHFLTGRWF
Ga0190271_1022533013300018481SoilLKPLFDSHYKKLVPGHGPTVEGEQAGRAYFKRMHDYLEDFYGHLQEIKAGSKSTDEVAKHMLGGAYASFGKTRMVQRNINHYLTGRWF
Ga0190264_1003723633300019377SoilGPAVEGEQAGRSYFKRMHDYLEDFYGNLEEIKSGRKSRDEVAKHMLSGNYAGLGKTRMVERNINQFLTGRWF
Ga0209108_1023137313300025165SoilKQLVPGHGPAVEGEKAGRAYFKKMYDYLEDFYGHAVDVKAGRESAEEAAKHMMSGAYASLGKTRMVQRNINHFLTGRWF
Ga0207660_1061643523300025917Corn RhizosphereHPVTFFGNIPNWLTALKPLFQTHYKQLVPGHGPAVDGEQAGRGYFQKMHDYLEDFYGNLEEIRSGRKSRDEVATHMLAGNYAGLGKTRMVERNINQFLTGKWY
Ga0207660_1170325723300025917Corn RhizosphereHGPAVDGEQAGRSYFQKMHDYLEDFYGNLEEIRLGRKSRDEVAKHMLAGNYAGLGKTRMVERNINQFLTGKWY
Ga0207644_1101954323300025931Switchgrass RhizosphereVTFFGNIPNWLRSLEQLFDSHYQQLVPGHGPAVDGEPSGRAYFKRMYDYLEDFYGHLLEIKAGRETSDLVAQHMLSGPYASLGKTRMVERNINQFLTGKWF
Ga0207670_1136849023300025936Switchgrass RhizosphereSHYKQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLLEVKAGRESSDELAQHMLSGSYRNLGKTRMVQRNVNQFLTGRWF
Ga0207670_1154589513300025936Switchgrass RhizosphereYTEVHPVTFFGNIPNWLIALKPLFDSHYKKLVPGHGPTVDDEQTGRRYFKKMYDYLEDFHGHLQEIKSGRESTDEVAKHMLGGTYAGLGKTRMVERNINQFLTGKWY
Ga0209154_100566713300026317SoilPGHGPAVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLSKTRMVQRNINQFLTGRWY
Ga0209472_1004330103300026323SoilWLTALKPLFQSHYKQLVPGHGPTVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY
Ga0209152_1032752423300026325SoilLTALKPLFQSHYKQLVPGHGPAVEGEQTGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLSKTRMVQRNINQFLTGRWY
Ga0209158_115415823300026333SoilQSHYKQLVPGHGPAVEGEQAGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLGKTRMVQRNINQFLTGRWY
Ga0256867_1006168923300026535SoilGPKVEGQQAGRAYFKKMYDYLEDFYAHLQEIKSGRKSAQDVAEYMMSGVYASLGKTRMVERNIHQFLTGRWY
Ga0209577_1046290713300026552SoilLFQSHYKQLVPGHGPAVEGEQTGRAYFKRMYDYLEDFYGHLLEVKSGQKSADEVASHMLSGPYATLSKTRMVQRNINQFLTGRWY
Ga0208185_115745613300027533SoilLKPLFDCRYKQLIPGHGPAVDGEQSGRTCFKRMHDYLEDFYGHLVEIDSGRTNREEVARHMQSGAYAKLGKTRMVERNINQFLTGRWF
Ga0209970_106380723300027614Arabidopsis Thaliana RhizospherePLFQNHYKQLVPGHGPTVEGEQAGRSYFKKMHDYLEDFYGNLEEIKAGRKSRDEVTQHMQSGHYAGLGKTRMVERNINQFLTGGWF
Ga0209485_100371813300027691Agricultural SoilYTEVHPVTFFGNIPNWLTALKPLFQTHYKQLVPGHGPAVEGEQAGRSYFKKMHDYLEDFYGHLEEIKSGRKSRDEVAKHMQSGNYAGLGKTRMVERNINQFLTGRWF
Ga0209073_1004975023300027765Agricultural SoilVPGHGPAVAGEQSGRAYFKKMYDYLEDFYGHLQEIKAGRENAEKVAQHMLSGAYANLGKTRMVQRNIDQFLTGRWF
Ga0209683_1014704623300027840Wetland SedimentALKPLFECHYQQLIPGHGPAVDSQQSGRAYFKRMHDYLEDFHGHLLEVDAGRTSREEVARHMQSGAYAKLGKTRMVERNIDQFLTGRWF
Ga0209481_1047604623300027880Populus RhizosphereLVPGHGPAVDGEQTGREYCKRMYDYLEDFHGHLLEIKSGRRSADEVADHMLSGNYVSLGKTRMVRRNIQQFLTGKWY
Ga0209382_1118090313300027909Populus RhizosphereTIYFEEEEVFIAGDLLYTALFETHYKHLVPGHGPTVEGEQSGMAYFKRTHDYLEDFHGHLEELKFDRKSESEVAQHMQSGAYAALGKSRMVERNINHFLTERWF
Ga0209889_106013823300027952Groundwater SandFEMHYKQLVPGHGPAVDDEQTGREYFKRMYDYLEDFHGHLLEIKSGGKSADEVADHMLSGKYASLGKTRMVRRNIQQFLTGQWY
Ga0210366_1011269423300028420EstuarineLTALKPLFESRYKQLIPGHGPAVEGEQNGRAYFKRMYDYLEDFHGRMVEVKAGRKDPEEVAEHMLSGAYASFGKTRMVSRNINHILTGRWF
Ga0299907_1052231413300030006SoilKPLFDSHYKTLVPGHGPTVEGEQEGRAYFKRMHDYLEDFYGHLQEIKAGRKSSDEVAKHMLTGPYANFGKTRMVQRNISHFLTGRWF
Ga0302046_1122577523300030620SoilLKPLFDSHYRTLVPGHGPTVEGEQEGRAYFKRMHDYLEDFYGHLQEIKAGRKSSDEVAKHMLTGPYANFGKTRMVQRNISHFLTGRWF
(restricted) Ga0255311_105498013300031150Sandy SoilLFQIRYKQLVPGHGPAVESEQAGRRYFKRMHDYLEDFYGNLEEIKAGRKSRDEVANHMRSGHYAGLGKTRMVERNINQFLTGRWY
Ga0310886_1097234023300031562SoilTALKPLFDSRYKRLVPGHGPAVEGEQAGRTYFKRMYDYLEDFYGHLQEIKAGRASTEEVAKHMLGGAYASFGKTRMVQRNINHYLTGRWF
Ga0310813_1008361033300031716SoilDLLYTEVHPVTFFSNIPNWLSSLKTLFDSHYKQLVPGHGPSVDGEQRGRAYFRKMHDYLEDFYGHLQEIKAGRESSDELAQHMLSGSYRSLGKTRMVQRNINQFLTGKWF
Ga0307475_1055160313300031754Hardwood Forest SoilHGPAVEGEKQGRAYFKKMYDYLEDFHGHLLEIKSGRKSADEVAAHMMSGAYSVLGKTRMVQRNINQFLTGKRY
Ga0307473_1107538123300031820Hardwood Forest SoilPAVEGEKQGRAYFKKMYDYLEDFHGHLLEIKSGRKSADEVAAHMMSGAYSVLGKTRMVQRNINQFLTGKRY
Ga0306921_1103975533300031912SoilVTFFGNIPNWLESLKPLVESHYNQVVPGHGPTVDDNHAGRKYFKSMYNYLEDFHEHLLEIKSGRRSTEEVAEYMLNGKYASLAKTRMVQKNIQQFLTGTWY
Ga0306924_1025999823300032076SoilVTFFGNIPNWLESLNPLVESHYNQVVPGHGPTVDDNHAGRKYFKSMYNYLEDFHEHLLEIKSGRRSTEEVAEYMLNGKYASLAKTRMVQKNIQQFLTGTWY
Ga0315912_1100598423300032157SoilKPLFDCHYKQLIPGHGPAVDGEESGRAYFKRMRDYLEDFYGQLQEIKSGRKSKEEIVQLMKTGAYSILGKTRMVERNINQFLTGKWF
Ga0307471_10025544233300032180Hardwood Forest SoilLTSIKPLFETHYKQLVPGHGPAVEGEKQGRAYFKKMYDYLEDFHGHLLEIKSGRKSADEVAAHMMSGAYSVLGKTRMVQRNINQFLTGKRY
Ga0335070_1058428423300032829SoilHPVTFFGNIPNWLTALKPLFDSHYKKLVPGHGPTVDDEQTGRTYFKKMYDYLEDFYGHLQEIKSGREGTDQVANHMLSGAYANFGKTRMVQRNINHFLTGKWF
Ga0316603_1069030423300033413SoilIPNWLTALKPLFECRYQQLIPGHGPAVAGEQAGRAYFKRMHDYLEDFYGRLVEIDAGRVSREEVARHMQSGVYAGLGKTRMVERNINQFLTGKWY
Ga0364934_0426723_244_4743300034178SedimentVPGHGPAVEGENAGRAYFKKMSDYLEDFYGHVVEVKAGRESAEEVAKHMLSGAYASFGKTRMVQRNINHFLTGRWF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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