NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068075

Metagenome / Metatranscriptome Family F068075

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068075
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 45 residues
Representative Sequence QGEPASYTPNPFMMVMEKGKLLKAAAPPAKKAPVHHKPASQ
Number of Associated Samples 113
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 88.00 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (51.200 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.600 % of family members)
Environment Ontology (ENVO) Unclassified
(26.400 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.200 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF02954HTH_8 67.20
PF02674Colicin_V 12.80
PF01259SAICAR_synt 6.40
PF13620CarboxypepD_reg 0.80
PF12833HTH_18 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG1286Colicin V production accessory protein CvpA, regulator of purF expression and biofilm formationCell wall/membrane/envelope biogenesis [M] 12.80
COG0152Phosphoribosylaminoimidazole-succinocarboxamide synthaseNucleotide transport and metabolism [F] 6.40

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.20 %
UnclassifiedrootN/A48.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_100210664Not Available577Open in IMG/M
3300001169|JGI12661J13543_104595All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis542Open in IMG/M
3300002245|JGIcombinedJ26739_101048252All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter701Open in IMG/M
3300004082|Ga0062384_101201096Not Available551Open in IMG/M
3300005435|Ga0070714_102032636Not Available560Open in IMG/M
3300005471|Ga0070698_100522763All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1125Open in IMG/M
3300005533|Ga0070734_10103596All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1669Open in IMG/M
3300005533|Ga0070734_10462934Not Available723Open in IMG/M
3300005534|Ga0070735_10145117All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1474Open in IMG/M
3300005538|Ga0070731_11178574All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter506Open in IMG/M
3300005591|Ga0070761_10153154All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300005602|Ga0070762_10417911All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter867Open in IMG/M
3300005602|Ga0070762_10909692Not Available600Open in IMG/M
3300005921|Ga0070766_10229442All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1171Open in IMG/M
3300006173|Ga0070716_100093584All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1825Open in IMG/M
3300009038|Ga0099829_11058225Not Available673Open in IMG/M
3300009089|Ga0099828_11329199Not Available636Open in IMG/M
3300009090|Ga0099827_11551868Not Available577Open in IMG/M
3300009093|Ga0105240_10546203All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300009143|Ga0099792_10505643Not Available757Open in IMG/M
3300009143|Ga0099792_11184450Not Available518Open in IMG/M
3300009520|Ga0116214_1203557Not Available745Open in IMG/M
3300009552|Ga0116138_1051518All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300009624|Ga0116105_1126521Not Available660Open in IMG/M
3300009792|Ga0126374_10294073All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300009824|Ga0116219_10803360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300010043|Ga0126380_11503785Not Available596Open in IMG/M
3300010159|Ga0099796_10485937Not Available552Open in IMG/M
3300010339|Ga0074046_10806268Not Available549Open in IMG/M
3300010341|Ga0074045_10359013Not Available949Open in IMG/M
3300010376|Ga0126381_103619246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300010937|Ga0137776_1819252Not Available744Open in IMG/M
3300011269|Ga0137392_10644919All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter878Open in IMG/M
3300011271|Ga0137393_10092862All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2449Open in IMG/M
3300012189|Ga0137388_10414905All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1247Open in IMG/M
3300012200|Ga0137382_10115532All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1787Open in IMG/M
3300012202|Ga0137363_11205143Not Available644Open in IMG/M
3300012971|Ga0126369_12280087Not Available628Open in IMG/M
3300014162|Ga0181538_10668274Not Available539Open in IMG/M
3300014165|Ga0181523_10305231All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300014167|Ga0181528_10492640Not Available673Open in IMG/M
3300015262|Ga0182007_10434763Not Available504Open in IMG/M
3300015265|Ga0182005_1180645Not Available627Open in IMG/M
3300016270|Ga0182036_10735804All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis800Open in IMG/M
3300016341|Ga0182035_12058262All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300017823|Ga0187818_10551745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300017936|Ga0187821_10208070Not Available754Open in IMG/M
3300017975|Ga0187782_10117167All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1967Open in IMG/M
3300017975|Ga0187782_11357915All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300018020|Ga0187861_10161053All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1028Open in IMG/M
3300018038|Ga0187855_10439919Not Available760Open in IMG/M
3300018057|Ga0187858_10811087Not Available554Open in IMG/M
3300018085|Ga0187772_11425177All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium515Open in IMG/M
3300018088|Ga0187771_11896015Not Available506Open in IMG/M
3300018090|Ga0187770_11742037Not Available509Open in IMG/M
3300020581|Ga0210399_10079205All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2667Open in IMG/M
3300021088|Ga0210404_10563120Not Available646Open in IMG/M
3300021170|Ga0210400_10102470All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2268Open in IMG/M
3300021171|Ga0210405_10869053Not Available687Open in IMG/M
3300021181|Ga0210388_11365444Not Available596Open in IMG/M
3300021402|Ga0210385_10012997All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5130Open in IMG/M
3300021404|Ga0210389_10183985All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1627Open in IMG/M
3300021406|Ga0210386_11668545Not Available527Open in IMG/M
3300021407|Ga0210383_10908445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300021420|Ga0210394_10108577All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2401Open in IMG/M
3300021420|Ga0210394_11243457Not Available638Open in IMG/M
3300021432|Ga0210384_11043131Not Available720Open in IMG/M
3300021474|Ga0210390_11169814Not Available622Open in IMG/M
3300021476|Ga0187846_10343319Not Available616Open in IMG/M
3300021478|Ga0210402_11947634Not Available513Open in IMG/M
3300021479|Ga0210410_10157592All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2025Open in IMG/M
3300021479|Ga0210410_11123237Not Available676Open in IMG/M
3300021560|Ga0126371_13799220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300021861|Ga0213853_10918067Not Available661Open in IMG/M
3300022881|Ga0224545_1002357All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3456Open in IMG/M
3300024225|Ga0224572_1017861All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1362Open in IMG/M
3300024295|Ga0224556_1105755Not Available689Open in IMG/M
3300025612|Ga0208691_1050721All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter941Open in IMG/M
3300025929|Ga0207664_10166283Not Available1885Open in IMG/M
3300026551|Ga0209648_10158875All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1775Open in IMG/M
3300027000|Ga0207803_1031645Not Available631Open in IMG/M
3300027014|Ga0207815_1021734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis792Open in IMG/M
3300027072|Ga0208238_1010629All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300027080|Ga0208237_1023049All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300027548|Ga0209523_1074433Not Available701Open in IMG/M
3300027604|Ga0208324_1151831Not Available630Open in IMG/M
3300027629|Ga0209422_1066933Not Available849Open in IMG/M
3300027698|Ga0209446_1125615Not Available662Open in IMG/M
3300027842|Ga0209580_10075019All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1610Open in IMG/M
3300027898|Ga0209067_10271285All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis927Open in IMG/M
3300027905|Ga0209415_10016240All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis11980Open in IMG/M
3300027908|Ga0209006_11214582Not Available588Open in IMG/M
3300028016|Ga0265354_1012272All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300028906|Ga0308309_10049969All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3007Open in IMG/M
3300029914|Ga0311359_10668470Not Available751Open in IMG/M
3300029918|Ga0302143_1076074Not Available780Open in IMG/M
3300029939|Ga0311328_10163016All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1768Open in IMG/M
3300029943|Ga0311340_11301032Not Available579Open in IMG/M
3300030399|Ga0311353_11266194Not Available606Open in IMG/M
3300030490|Ga0302184_10428271Not Available511Open in IMG/M
3300030524|Ga0311357_11762770Not Available516Open in IMG/M
3300030580|Ga0311355_10256675All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1785Open in IMG/M
3300030580|Ga0311355_11311942Not Available633Open in IMG/M
3300030741|Ga0265459_10190706All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1324Open in IMG/M
3300031018|Ga0265773_1020706Not Available646Open in IMG/M
3300031234|Ga0302325_10377027All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2230Open in IMG/M
3300031234|Ga0302325_12695620Not Available586Open in IMG/M
3300031236|Ga0302324_100194766All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3243Open in IMG/M
3300031525|Ga0302326_10379553All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2204Open in IMG/M
3300031718|Ga0307474_10442354All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300031754|Ga0307475_11159234Not Available603Open in IMG/M
3300031754|Ga0307475_11297324Not Available564Open in IMG/M
3300031910|Ga0306923_10745024All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1087Open in IMG/M
3300031938|Ga0308175_101201646All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis843Open in IMG/M
3300031962|Ga0307479_10176436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2100Open in IMG/M
3300031962|Ga0307479_12151821Not Available505Open in IMG/M
3300032076|Ga0306924_12188164Not Available564Open in IMG/M
3300032782|Ga0335082_10075070All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3412Open in IMG/M
3300032783|Ga0335079_12205508Not Available525Open in IMG/M
3300032893|Ga0335069_10072870All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4412Open in IMG/M
3300032898|Ga0335072_10660253All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1034Open in IMG/M
3300033004|Ga0335084_10948972All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter868Open in IMG/M
3300033158|Ga0335077_10630833All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1114Open in IMG/M
3300033158|Ga0335077_10686030All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1057Open in IMG/M
3300033158|Ga0335077_10757212All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter994Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.60%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.80%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.40%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.20%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.40%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.40%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.40%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.40%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.60%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.60%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.60%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.60%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.60%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.80%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001169Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024295Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027000Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)EnvironmentalOpen in IMG/M
3300027014Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027072Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)EnvironmentalOpen in IMG/M
3300027080Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028016Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1Host-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029918Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1EnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10021066413300000955SoilPKDGSDNFQFQGEPASYTPSPFMMVMEKGRLLSAPKPASPARKAPARKPAGQ*
JGI12661J13543_10459513300001169Forest SoilSLDFQGEPASYTPNPFMMVMEKGKLLKAAAPTPAKKAPVHHKPASQ*
JGIcombinedJ26739_10104825213300002245Forest SoilSYTPNPFMMVMEKGKLLKAAAPSPAKPAVHHKAASSQ*
Ga0062384_10120109623300004082Bog Forest SoilGEPASYTPSPFMMTMEKGKLLKAAAPAPPARKPAARKPASN*
Ga0070714_10203263623300005435Agricultural SoilGSDNFQFQGEPASYTPSPFMMVMEKGRLLSAPKPASPARKAPARKPAGQ*
Ga0070698_10052276313300005471Corn, Switchgrass And Miscanthus RhizosphereIPKEGASLDFQGEPASYTPSPFMMVMEKGRLLKAAAPGPTKKPPVHRKPAAH*
Ga0070734_1010359643300005533Surface SoilPFMMVMEKGQLLRAKPAAPAHRSGTATHKKPAAQ*
Ga0070734_1046293423300005533Surface SoilTPNPFMMVMEKGQLLRAKAAAPAKGAATHKKPAAQ*
Ga0070735_1014511713300005534Surface SoilGEPASYTSNPFMMVMEKGQLLRSKPAAPAHKSTTTHKKPAAQ*
Ga0070731_1117857423300005538Surface SoilPNPFMMVMEKGQLLRAKPAAPAHKPAATHKKPAAQ*
Ga0070761_1015315443300005591SoilFRGEPASYTPNPFMMVMEKGVILTKAAPKPATPVHHKPAAAQ*
Ga0070762_1041791133300005602SoilYTPNPFMMVMEKGTMLRAKPAATAPTHKAPVHKKPAAQ*
Ga0070762_1090969213300005602SoilKDGASFDFQGEPASYTPSPFMMVMEKGQLLKAAAPAAKKPPVHHKPAAQ*
Ga0070766_1022944213300005921SoilQGEPASYTPNPFMMVMEKGKLLKAAAPSPAKPAVHHKAASSQ*
Ga0070716_10009358443300006173Corn, Switchgrass And Miscanthus RhizosphereLIPKDGASFDFQGEPASYTPSPFMMVMEKGQLLKAKAAPPAKKPPVHRKPAAQ*
Ga0099829_1105822513300009038Vadose Zone SoilIPKEGASLDFQGEPASYAPSPFMMTMEKGKLLKAAAPATPAKKPPVHHKPAAH*
Ga0099828_1132919913300009089Vadose Zone SoilKDGASLDFQGEPASYTPSPFMMTMEKGKLLKAAAPATPAKKPPVHHKPAAH*
Ga0099827_1155186813300009090Vadose Zone SoilSLDFQGEPASYTPSPFMMTMEKGKLLKAATPTPAKKPPVHRKPAAH*
Ga0105240_1054620333300009093Corn RhizosphereEGASFDFQGEPASYTSNPFMMVMEKGQLLRAKPAPTTTRKAPARRKPATHQ*
Ga0099792_1050564323300009143Vadose Zone SoilGASFDFQGEPAAYTPNPFMMTMEKGTLLRAKPAATTPTHKAPVHRKPAAQ*
Ga0099792_1118445023300009143Vadose Zone SoilYTPSPFMMTMEKGKLLKAAAPTPAKKPPVHRKPAAH*
Ga0116214_120355723300009520Peatlands SoilFDFQGEPASYTPNPFMMVMEKGLLLKKATPKPAPKAPVHHKPAAQ*
Ga0116138_105151833300009552PeatlandFQGEPASYTPNPFMMVMGKGKLLKAAAPTPAKKAPVHHKATTSQ*
Ga0116105_112652133300009624PeatlandEGASLDFQGEPASYTANPFMMTMEKGMLAKPKAAPAKPPVHHKPAASN*
Ga0126374_1029407313300009792Tropical Forest SoilYTPNPFMMVMEKGQLLRTKPAATTPAHKAPVHRKPAGQ*
Ga0116219_1080336013300009824Peatlands SoilMIPKDGASFDFQGEPASYTPSPFMMVMEKGQLLKAKTTPKPPVHHKPAAQ*
Ga0126380_1150378523300010043Tropical Forest SoilASFDFQGEPASYTPNPFMMVMEKGQLLRAKPAATTPAHKPPVHRKPAGQ*
Ga0099796_1048593723300010159Vadose Zone SoilDFQGEPASYTPSPFMMTMEKGKLLKAAAPAAPAKKAPVHHKPAAH*
Ga0074046_1080626813300010339Bog Forest SoilYTPNPFMMVMEKGQLLRQKPAAPAKKAAPVHHKAAAQ*
Ga0074045_1035901333300010341Bog Forest SoilPAAYTPNPFMMTMEKGTLLKAAAPAKKPPVHHKPAASQ*
Ga0126381_10361924613300010376Tropical Forest SoilIPKDGANDFQFQGEPASYTSNPFMMVMEKGRLLSSKPAAPAAKKPPVRRKPAAQ*
Ga0137776_181925213300010937SedimentKLPAKMIPKDGANDFQFQGEPASYTSSPFMMVMEKGRLLSSKPAAPAARKAPVRRKPAAQ
Ga0137392_1064491913300011269Vadose Zone SoilASYTPNPFMMVMEKGRLLKAAAPGPTKKPPVHRKPAAH*
Ga0137393_1009286253300011271Vadose Zone SoilEPASYTPSPFMMIMEKGKLLKAATPTPAKKPPVHRKPAAH*
Ga0137388_1041490513300012189Vadose Zone SoilRLIPKDGASLDFQGEPASYTPSPFMMTMEKGKLLKAATPTPAKKPPVHRKPAAH*
Ga0137382_1011553243300012200Vadose Zone SoilEPASYTPNPFMMVMEKGRLLNAKPAATTPTHKAPVHKKPAAQ*
Ga0137363_1120514323300012202Vadose Zone SoilEPASYTPNPFMMVMEKGQLLRAKAAPPAKKPAVHRKPTAQ*
Ga0126369_1228008713300012971Tropical Forest SoilNDFQFQGEPASYTPNPFMMVMEKGRLLTSKPAAPAAKRAPVRRKPAAQ*
Ga0181538_1066827413300014162BogDFQGEPASYTPNPFMMVMEKGQLLRKKAPPAAPVHHKPAAKPAAAQ*
Ga0181523_1030523133300014165BogSLDFQGEPASYTPNPFMMVMGKGKLLKAAAPTPAKKAPVHHKATTSQ*
Ga0181528_1049264023300014167BogDFQGNPVSYTPNPFMMVMEKGVLLVKPAAPKPPVHHKPAAAPAQ*
Ga0182007_1043476323300015262RhizosphereYTSNPFMMVMEKGQLLRAKPAPTTTRKAPAHRKPATHQ*
Ga0182005_118064513300015265RhizosphereATFDFQGGPASSTSNPFMMVMEKGQLLRAKAAPATTRKAPARRKPASHQ*
Ga0182036_1073580433300016270SoilFEDKLPAKMTPKDGTDNFQFQGEPASYTSSPFMMVMEKGQLLRAKPAATTPAHKAPVHRKPAAQ
Ga0182035_1205826213300016341SoilITLKFEDKLPAKMTPKDGTDNFQFQGEPASYTSSPFMMVMEKGQLLRAKPAATTPAHKAPVHRKPAAQ
Ga0187818_1055174523300017823Freshwater SedimentDFQGEPASYTPSPFMMVMEKGRLLNAKPATPAKKPPVHHKAAAQ
Ga0187821_1020807013300017936Freshwater SedimentKDGASFDFQGEPTSYTPNPFMMVMTKGQLLRAKPDAPAKKPPVHRKPAAAAH
Ga0187782_1011716713300017975Tropical PeatlandGNPASYTQTPFMMTMEKGMLPKPKTPARPAPKKPTAN
Ga0187782_1135791513300017975Tropical PeatlandIPKDGTDDFKFQGEPASYTPAPFMMVMEKGRLLSAPKPAATHKPVAKKPAASQ
Ga0187861_1016105313300018020PeatlandASLDFQGEPASYTPNPFMMVMGKGKLLKAAAPTPAKKAPVHHKATTSQ
Ga0187855_1043991913300018038PeatlandDGASFDFQGEPASYTPNPFMMVMEKARLLNAKPAAAPAKKPVHHAPASQ
Ga0187858_1081108713300018057PeatlandKLLIPKDGASFDFQGVPASYTPNPFMMVMEKGQLLKKATPKPATPVHHKAAAPAQ
Ga0187772_1142517713300018085Tropical PeatlandPASYTPTPFMMIMDKGTLLTKAAPKKPATPVHHKPAASQ
Ga0187771_1189601513300018088Tropical PeatlandTLKFEDKVPVRMIPKSGTDNFQFQGEPASYTPNPFMMVMEKGRLLNAKPTTPAHKPTTHKGAAK
Ga0187770_1174203723300018090Tropical PeatlandLDFQGNPASYTQSPFMMTMEKGMLPKPKAAPPAHKPPVHHKPS
Ga0210399_1007920513300020581SoilFDFQGEPASYTPSPFMMVMEKGTLLRAKPAATAPTRKAPVHKKPAAQ
Ga0210404_1056312013300021088SoilSYTPNPFMMVMEKGQLLKAAAPKKAAPVHHKAAASQ
Ga0210400_1010247013300021170SoilGASLDFQGEPASYTPNPFMMVMEKGKLLKAAAPAAPAKKAPVHHKPASQ
Ga0210405_1086905323300021171SoilSYTPNPFMMVMEKGQLLKKATPKPTTPVHHKPAAAKPAAQ
Ga0210388_1136544413300021181SoilSLDFQGEPASYTPNPFMMTMEKGVIPKPKVAPKPPVHHKPTN
Ga0210385_1001299753300021402SoilGASFDFQGEPASYTPSPFMMTMANGKLLKAAAPAKAPVHHKAASQ
Ga0210389_1018398543300021404SoilLRLIPKEGASLDFQGEPSSYTPSPFMMSMEKGKLLKAAAPTPAKKAPVHHKPASQ
Ga0210386_1166854513300021406SoilSYTPNPFMMVMENGKLLKAAAPAPTHKPPVHKKPAAQ
Ga0210383_1090844523300021407SoilGEPASYTPNPFMMTMEKGKLLKAATPTPVKRPVHKPAAN
Ga0210394_1010857743300021420SoilEPASYTPNPFMMVMEKGALLKAAAPPATKKPPVHHKATAQ
Ga0210394_1124345713300021420SoilQGEPASYTPSPFMMTMEKGKLLKAATPTPAKKPVHKPAAN
Ga0210384_1104313113300021432SoilEPASYTPSPFMMVMEKGQLLKAAAPAAKKPPVHHKPAAQ
Ga0210390_1116981423300021474SoilQGEPASYTPNPFMMTMEKGKLLKAAAPAPVKKAAPAHHKPASQ
Ga0187846_1034331913300021476BiofilmDNFQFQGEPASYTANPFMMVMEKGQLLRAKAAPAPTHKAPVHHKPASQ
Ga0210402_1194763413300021478SoilYTPSPFMMVLEKGVLILPKTAPKPVVHHKPAAAAAH
Ga0210410_1015759243300021479SoilEPSSYTPNPFMMVLEKGRLLNAKPAATPAKKPPVHHKPAAQ
Ga0210410_1112323713300021479SoilKDGASFDFQGEPASYTPTPFMMVMEKGVLILPKVAPKPPVHHTKPAAAPAK
Ga0126371_1379922013300021560Tropical Forest SoilGEPASYTSSPFMMVMEKGRLLSSKPAAPAAKKAPVRRKPAAQ
Ga0213853_1091806713300021861WatershedsFQGEPASYTPSPFMMVMEKGRLLNAKPATTPAKKPPVHHKAAAQ
Ga0224545_100235753300022881SoilEPASYTPNPFMMVMEKGKLLTPTPAKKAPVHHKPASQ
Ga0224572_101786113300024225RhizosphereQGEPASYTPNPFMMTMDKGQLLKAAAPAKKAAPVHHKPASQ
Ga0224556_110575513300024295SoilESYTPNPFMMTMEKGKLLKAAAPATPAKKPTAHKPASQ
Ga0208691_105072133300025612PeatlandKDGASFDFRGEPASYTPNPFMMVMEKGVILTKAAPKPTTPVHHKPAAAPGQ
Ga0207664_1016628343300025929Agricultural SoilEPASYTPNPFMMVMEKGQLLRAKSATPAKKPPVRRKPAAQ
Ga0209648_1015887543300026551Grasslands SoilQGEPASYTPSPFMMIMEKGKLLKAATPTPAKKPPVHRKPAAH
Ga0207803_103164513300027000Tropical Forest SoilGEPASYTPNPFMMVMEKGQLLKAKAAAPAAKKPPVHKKPAAQ
Ga0207815_102173433300027014Tropical Forest SoilPVKMVPKDGTDNFQFQGEPASYTSSPFMMVMEKGQLLRAKPAATTPAHKAPVHRKPAGQ
Ga0208238_101062923300027072Forest SoilSLDFQGNPASYTPNPFMMTMEKGLLPKPKVAAPVHHKPASN
Ga0208237_102304933300027080Forest SoilSLDFQGEPASYTPSPFMMTMEKGKLLKAAAPAKPATTHHKTASQ
Ga0209523_107443313300027548Forest SoilQGEPPSYTPNPFMMVMEKGTLLRAKPAATAPTHKAPVHKKPAAQ
Ga0208324_115183123300027604Peatlands SoilQGEPASYTPSPFMMVMEKGQLLRAKTAPPAKKPPVHHKPAAAQ
Ga0209422_106693333300027629Forest SoilTPTPFMMTMEKGKLLKAAAPAPAKKPAVHHKPASQ
Ga0209446_112561523300027698Bog Forest SoilTPNPFMMVMDKGRLLSAKPAATPAKKPPVHHKPAAQ
Ga0209580_1007501943300027842Surface SoilASYTSNPFMMVMEKGQLLRAKPAATTRKAPAHHKAASHQ
Ga0209067_1027128533300027898WatershedsNPFMMVMEKGRLLNAKPASTTPTHKAPVHKKPAAQ
Ga0209415_1001624013300027905Peatlands SoilQGNPASYTPNPFMMTMEKGMLPKPKVTPKPPVHHKPAASN
Ga0209006_1121458223300027908Forest SoilLARQIPKDGASFDFQGEPASYTPSPFVMVMEKAKLLTKAAPPAAHKPAAAHKPAAQ
Ga0265354_101227213300028016RhizosphereASLDFQGEPSAYTPSPFMMTMEKGKLLKAATPAPAAKKTVHKPAAQ
Ga0308309_1004996943300028906SoilIDFQGEPSAYTPNPFMMTMEKGLLAKPKTAPKAPVHPHPKPAAQ
Ga0311359_1066847013300029914BogLQLKLIPKEGASLDFQGVPASYTASPFMMTMEKGMLAKPKAAPAKPPVHHKPAASN
Ga0302143_107607413300029918BogPASYTPNPFMMTMEKGKLLKAAAPATPAKKPTAHKPASQ
Ga0311328_1016301643300029939BogLDFQGEPASYTANPFMMTMEKGMLAKPKAAPAKPPVHHKPAASN
Ga0311340_1130103233300029943PalsaFQGEPASYTPNPFMMTMDKGQLLKAAPAKPAVHHKPAAQ
Ga0311353_1126619423300030399PalsaGASFDFKGVPASYTPNPFMMVMEKGVILLAKPAAKPPVHHKPAAQ
Ga0302184_1042827113300030490PalsaSLDFQGEPASYTPNPFMMTMEKGKLLKAAAPAPVKKAPAHKPASQ
Ga0311357_1176277013300030524PalsaDSLDFQGEPASYTPSPFMMTMEKGKLLKAATPTPAKKPPAHKPASQ
Ga0311355_1025667513300030580PalsaPKEGASLDFQGEPASYTPSPFMMVMEKGALPKPKVAPKAAPRHKPAS
Ga0311355_1131194233300030580PalsaQGEPASYTPNPFMMTMEKGQLLKPKTAPKPAVHHKPASN
Ga0265459_1019070643300030741SoilPSAYTPNPFMMTMEKGLLEKPKTAPKPPVHPHPKPAAQ
Ga0265773_102070623300031018SoilRLIPKENASLDFQGEPASYTPNPFMMTMEKGKLLKAAAPTPAAKKPVHKPASN
Ga0302325_1037702713300031234PalsaVPASYTPNPFMMVMEKGVILLAKPAAKPPVHHKPAAQ
Ga0302325_1269562013300031234PalsaQGEPASYTPNPFMMVMEKGKLLKAAAPPAKKAPVHHKPASQ
Ga0302324_10019476663300031236PalsaYTPNPFMMVMEKGKLLKAAAPAKKTPPAHHKPTVQ
Ga0302326_1037955313300031525PalsaDFQGEPASYTPNPFMMVMEKGKLLKAAAPAKKTPPAHHKPTAQ
Ga0307474_1044235433300031718Hardwood Forest SoilKLIPKDGASLDFQGEPASYTTSPFMMTMEKGKLLKAATPTPAKKAPVHRKPASQ
Ga0307475_1115923413300031754Hardwood Forest SoilDFQGEPSAYTPNPFMMTMEKGMLAKPKTTPKPPVHHKPAAAK
Ga0307475_1129732423300031754Hardwood Forest SoilSYTPNPFMMTMEKGQLLRAKPAATTPTHKPPVHHKPAAQ
Ga0306923_1074502413300031910SoilTLKFEEKVPAKMIPKDGDNNFQFQGEPASYTSNPFMMVMEKGTLLRSKPSATTPAHKSPVHRKPSGQ
Ga0308175_10120164633300031938SoilEGASFDFQGEPASYTSNPFMMVMEKGQLLRAKPAPTTTRKAPARRKPATHQ
Ga0307479_1017643613300031962Hardwood Forest SoilEDKVPVKMIPKDGASFDFQGEPASYTPNPFTMVMEKGRLLNAKPAATPAKKAPVHHKAAS
Ga0307479_1215182123300031962Hardwood Forest SoilPNPFMMVMEKGTLLRAKPAATAPTHKAPVHKKPAAQ
Ga0306924_1218816413300032076SoilMIPKDGDNNFQFQGEPASYTSNPFMMVMEKGTLLRSKPSATTPAHKSPVHRKPSGQ
Ga0335082_1007507053300032782SoilPVKMIPKDGTDNFQFQGEPASYTSTPFMMVMEKARLLNAKPAATTPTKKPPVRRKPAAQ
Ga0335079_1220550823300032783SoilQGEPASYTSNPFIMVMEKGRLLNTKPAAAPAHKTAPVHKKPAAQ
Ga0335069_1007287053300032893SoilFQGEPASYTPNPFMMVMENGKLLNAKPAASPTKKAPVHKKPAAQ
Ga0335072_1066025313300032898SoilFQGEPASYTSNPFMMVMEKGLLLKAKAAAPPAHKAPVHHKPAAQ
Ga0335084_1094897213300033004SoilFEDKVPVKMIPKDGTDNFQFQGEPASYTSTPFMMVMEKARLLNAKPAATTPTKKPPVRRKPAAQ
Ga0335077_1063083313300033158SoilDGTDNFQFQGEPASYTPNPFMMVMEKARLLSAPKPAAPAHKAPVHRKAAAQ
Ga0335077_1068603033300033158SoilKDGASFNFQGEPASYTLNPFVMVMENGRLLRSKPAVPAGKPTAPAHRKPSAAQ
Ga0335077_1075721213300033158SoilDTVPAKLIPKDGASFDFQGEPASYTSNPFIMVMEKGRLLNTKPAAAPAHKTAPVHKKPAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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