Metagenome / Metatranscriptome Family F067899

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067899
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	91 residues
Representative Sequence	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL
Number of Associated Samples	88
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.61 %
% of genes near scaffold ends (potentially truncated)	28.00 %
% of genes from short scaffolds (< 2000 bps)	88.80 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.200 % of family members)
Environment Ontology (ENVO)	Unclassified (43.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.92% β-sheet: 0.00% Coil/Unstructured: 45.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d3o48a1	3o48	0.65548
a.118.8.1: Tetratricopeptide repeat (TPR)	d1qqea_	1qqe	0.6552
a.118.8.0: automated matches	d3rkva_	3rkv	0.64791
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.64008
a.118.8.0: automated matches	d5ompa3	5omp	0.63993

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01909	NTP_transf_2	4.00
PF00221	Lyase_aromatic	3.20
PF01738	DLH	2.40
PF04964	Flp_Fap	2.40
PF13427	DUF4111	2.40
PF00583	Acetyltransf_1	1.60
PF07885	Ion_trans_2	1.60
PF01068	DNA_ligase_A_M	0.80
PF13577	SnoaL_4	0.80
PF14528	LAGLIDADG_3	0.80
PF13481	AAA_25	0.80
PF00891	Methyltransf_2	0.80
PF01177	Asp_Glu_race	0.80
PF03795	YCII	0.80
PF12680	SnoaL_2	0.80
PF15780	ASH	0.80
PF01435	Peptidase_M48	0.80
PF00392	GntR	0.80
PF08592	Anthrone_oxy	0.80
PF07676	PD40	0.80
PF00484	Pro_CA	0.80
PF01391	Collagen	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	3.20
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	2.40
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.80
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.80
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
All Organisms	root	All Organisms	44.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
cellular organisms	root	All Organisms → cellular organisms	44.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.40 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.60 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.60 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.20 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.60 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.20 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.60 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.80 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.20 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.20 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.60 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.80 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.20 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.20 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.60 %
Herbiconiux	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux	0.80 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.80 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.20 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2.40 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.60 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.80 %
unclassified Herbiconiux	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux	0.80 %
Nonomuraea coxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	0.80 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.20 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2.40 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.60 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.80 %
Herbiconiux sp. CPCC 205763	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 205763	0.80 %
Nonomuraea coxensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	0.80 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10593191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300000956\|JGI10216J12902_101750847	Not Available	1310	Open in IMG/M
3300000956\|JGI10216J12902_104759577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2630	Open in IMG/M
3300000956\|JGI10216J12902_111507188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300003998\|Ga0055472_10033903	Not Available	1211	Open in IMG/M
3300004463\|Ga0063356_100222046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2255	Open in IMG/M
3300004479\|Ga0062595_100565545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300005162\|Ga0066814_10005931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1336	Open in IMG/M
3300005329\|Ga0070683_101322106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	693	Open in IMG/M
3300005331\|Ga0070670_102146837	Not Available	515	Open in IMG/M
3300005332\|Ga0066388_100403585	Not Available	2012	Open in IMG/M
3300005332\|Ga0066388_108649714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	506	Open in IMG/M
3300005334\|Ga0068869_100807145	Not Available	807	Open in IMG/M
3300005345\|Ga0070692_11249012	Not Available	531	Open in IMG/M
3300005353\|Ga0070669_101530632	Not Available	580	Open in IMG/M
3300005354\|Ga0070675_101607378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	600	Open in IMG/M
3300005441\|Ga0070700_100180557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300005459\|Ga0068867_100469413	Not Available	1076	Open in IMG/M
3300005466\|Ga0070685_10051502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2381	Open in IMG/M
3300005466\|Ga0070685_10322393	Not Available	1048	Open in IMG/M
3300005466\|Ga0070685_10683121	Not Available	747	Open in IMG/M
3300005535\|Ga0070684_100363883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1331	Open in IMG/M
3300005543\|Ga0070672_101024852	Not Available	732	Open in IMG/M
3300005545\|Ga0070695_101572872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	548	Open in IMG/M
3300005546\|Ga0070696_101603271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	559	Open in IMG/M
3300005616\|Ga0068852_101219761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300005841\|Ga0068863_101510755	Not Available	680	Open in IMG/M
3300005843\|Ga0068860_100337198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300006196\|Ga0075422_10238434	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006580\|Ga0074049_10906239	Not Available	745	Open in IMG/M
3300006881\|Ga0068865_101480785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	608	Open in IMG/M
3300006881\|Ga0068865_101635030	Not Available	580	Open in IMG/M
3300006904\|Ga0075424_101693267	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006969\|Ga0075419_10557385	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300009098\|Ga0105245_12487550	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009100\|Ga0075418_10840759	Not Available	992	Open in IMG/M
3300009148\|Ga0105243_12015626	Not Available	612	Open in IMG/M
3300009545\|Ga0105237_11670984	Not Available	644	Open in IMG/M
3300009551\|Ga0105238_12028668	Not Available	609	Open in IMG/M
3300009553\|Ga0105249_10307789	Not Available	1592	Open in IMG/M
3300009553\|Ga0105249_10519575	Not Available	1238	Open in IMG/M
3300009553\|Ga0105249_12759418	Not Available	563	Open in IMG/M
3300010362\|Ga0126377_10129638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2342	Open in IMG/M
3300010371\|Ga0134125_11900401	Not Available	647	Open in IMG/M
3300010399\|Ga0134127_10484593	Not Available	1245	Open in IMG/M
3300010401\|Ga0134121_13077713	Not Available	514	Open in IMG/M
3300010403\|Ga0134123_10709096	Not Available	985	Open in IMG/M
3300011107\|Ga0151490_1627736	Not Available	640	Open in IMG/M
3300011119\|Ga0105246_10196818	Not Available	1564	Open in IMG/M
3300011119\|Ga0105246_10367010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185	Open in IMG/M
3300012897\|Ga0157285_10335287	Not Available	526	Open in IMG/M
3300012907\|Ga0157283_10010338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1549	Open in IMG/M
3300012943\|Ga0164241_10022898	All Organisms → cellular organisms → Bacteria	4858	Open in IMG/M
3300012943\|Ga0164241_10062493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2708	Open in IMG/M
3300012943\|Ga0164241_10130160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1803	Open in IMG/M
3300012958\|Ga0164299_10103772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1483	Open in IMG/M
3300012958\|Ga0164299_10582814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300012961\|Ga0164302_11400893	Not Available	571	Open in IMG/M
3300012984\|Ga0164309_11383489	Not Available	599	Open in IMG/M
3300013306\|Ga0163162_10227530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1995	Open in IMG/M
3300013308\|Ga0157375_10269662	Not Available	1864	Open in IMG/M
3300013308\|Ga0157375_10512327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1363	Open in IMG/M
3300013308\|Ga0157375_10786812	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300014325\|Ga0163163_11457951	Not Available	746	Open in IMG/M
3300014325\|Ga0163163_11682930	Not Available	695	Open in IMG/M
3300014326\|Ga0157380_10231654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1659	Open in IMG/M
3300014326\|Ga0157380_10296023	Not Available	1488	Open in IMG/M
3300014326\|Ga0157380_11225132	Not Available	795	Open in IMG/M
3300014326\|Ga0157380_11867710	Not Available	661	Open in IMG/M
3300014326\|Ga0157380_12400875	Not Available	592	Open in IMG/M
3300014968\|Ga0157379_10333380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1386	Open in IMG/M
3300014969\|Ga0157376_10480370	Not Available	1218	Open in IMG/M
3300015371\|Ga0132258_10091727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea coxensis	7127	Open in IMG/M
3300015371\|Ga0132258_10191719	All Organisms → cellular organisms → Bacteria	4952	Open in IMG/M
3300015371\|Ga0132258_10759573	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300015371\|Ga0132258_11502214	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300015372\|Ga0132256_100183732	Not Available	2127	Open in IMG/M
3300015373\|Ga0132257_100068413	All Organisms → cellular organisms → Bacteria	4008	Open in IMG/M
3300015373\|Ga0132257_100572951	Not Available	1392	Open in IMG/M
3300015373\|Ga0132257_101048663	Not Available	1027	Open in IMG/M
3300015374\|Ga0132255_100033525	All Organisms → cellular organisms → Bacteria	6531	Open in IMG/M
3300015374\|Ga0132255_103699471	Not Available	650	Open in IMG/M
3300015374\|Ga0132255_104383921	Not Available	598	Open in IMG/M
3300017965\|Ga0190266_10107927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1161	Open in IMG/M
3300018466\|Ga0190268_10799741	Not Available	714	Open in IMG/M
3300018469\|Ga0190270_10333682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300018469\|Ga0190270_10615843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300018469\|Ga0190270_12678199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300018469\|Ga0190270_13177946	Not Available	520	Open in IMG/M
3300018476\|Ga0190274_10407430	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1321	Open in IMG/M
3300018476\|Ga0190274_11042442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
3300018476\|Ga0190274_11737740	Not Available	718	Open in IMG/M
3300018481\|Ga0190271_10584150	Not Available	1235	Open in IMG/M
3300019767\|Ga0190267_10968398	Not Available	592	Open in IMG/M
3300022893\|Ga0247787_1008642	Not Available	1235	Open in IMG/M
3300025901\|Ga0207688_10277605	Not Available	1020	Open in IMG/M
3300025907\|Ga0207645_10614006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 205763	738	Open in IMG/M
3300025936\|Ga0207670_10687267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	846	Open in IMG/M
3300025936\|Ga0207670_10924646	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300025938\|Ga0207704_11168350	Not Available	655	Open in IMG/M
3300025938\|Ga0207704_11630171	Not Available	554	Open in IMG/M
3300025961\|Ga0207712_10218784	Not Available	1521	Open in IMG/M
3300026067\|Ga0207678_10821404	Not Available	821	Open in IMG/M
3300026089\|Ga0207648_11023809	Not Available	774	Open in IMG/M
3300026095\|Ga0207676_12251786	Not Available	543	Open in IMG/M
3300026118\|Ga0207675_100924462	Not Available	889	Open in IMG/M
3300026995\|Ga0208761_1034909	Not Available	516	Open in IMG/M
3300028587\|Ga0247828_10281241	All Organisms → cellular organisms → Bacteria → Terrabacteria group	909	Open in IMG/M
3300028592\|Ga0247822_11564368	Not Available	558	Open in IMG/M
3300028596\|Ga0247821_11115546	Not Available	533	Open in IMG/M
3300028802\|Ga0307503_10050793	Not Available	1581	Open in IMG/M
3300028802\|Ga0307503_10228198	Not Available	898	Open in IMG/M
3300028802\|Ga0307503_10523843	Not Available	642	Open in IMG/M
3300028812\|Ga0247825_10698426	Not Available	730	Open in IMG/M
3300028889\|Ga0247827_10527693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300030336\|Ga0247826_10168677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1464	Open in IMG/M
3300030336\|Ga0247826_11010325	Not Available	661	Open in IMG/M
3300031366\|Ga0307506_10326014	Not Available	609	Open in IMG/M
3300031547\|Ga0310887_10697399	Not Available	630	Open in IMG/M
3300032013\|Ga0310906_10517919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300032075\|Ga0310890_11553650	Not Available	546	Open in IMG/M
3300032075\|Ga0310890_11727876	Not Available	519	Open in IMG/M
3300032122\|Ga0310895_10502123	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032174\|Ga0307470_11288163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.80%
Host-Associated	Host-Associated	47.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.00%
Plants	Host-Associated → Plants	47.20%
Aquatic	Environmental → Aquatic	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Roots	Host-Associated → Plants → Roots	1.60%
Marine	Environmental → Aquatic → Marine	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.00%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.60%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_105931912	3300000363	Soil	VTPEGHFGARLQRALAAGNLTAAEQAAFEVAFVSLAQARALLELYAATGDRKFERAALKYLARYLTEGKPSLADVAQMAALLERAT*
JGI10216J12902_1017508471	3300000956	Soil	VNSEGHLGARLQRALATGNLIAAEQAAFEVAFIPLEQARALVELYAEKGERKYERAALKYLRRYLDESDVAQVAAVLAE
JGI10216J12902_1047595772	3300000956	Soil	VSVTEIRAREQTQATSASRTGPPGARLQRALAAGDLTAAEQAAEVAFVPLQQARALVRLYAEHGDTKYERAALKYLARYLTEGEPTLADVAQVAALLAERSLMMRGL*
JGI10216J12902_1115071882	3300000956	Soil	VTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLTDARELVELYAEKGDPKYERAALKYLSRYLAEENPSLMDLAQVAGLLAERSMLMRGL*
Ga0055472_100339031	3300003998	Natural And Restored Wetlands	VTSEGHPGARLQRALAAGNLMAAEQAAFEVAFVPLDDARAFVEPSPDRGDRKYERAAPKYLARYLDEATPSLTDFAQVARCS
Ga0063356_1002220463	3300004463	Arabidopsis Thaliana Rhizosphere	MFVTSEGHPGARLQRALAAGNLTAAEQAAFEIPFVPLASARALVELYAEKGDPKFERAALKYLARYLAEGKPSLTDVAQVAALLAERSMLMRGL*
Ga0062595_1005655452	3300004479	Soil	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLARYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0066814_100059312	3300005162	Soil	MFVTSEGRPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYMAEGSPSLADVAQIAGVLAERGLLMRGL*
Ga0070683_1013221061	3300005329	Corn Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLMMRGL*
Ga0070670_1021468372	3300005331	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0066388_1004035854	3300005332	Tropical Forest Soil	MFVTSEGHPGARLQRALAAGNLIAAEQAAFEVSFIPLAQARLLVELYAEKGDSKYERAALKYLARYLDEEKPSLTDFAQVAALLAERGLLMRGM*
Ga0066388_1086497141	3300005332	Tropical Forest Soil	VTSEGHPSARLQRALAVGNLIAAEQAAFEISFIPLAQVRLLVELYAEKGDPKFERAALKYLAGYMDEEKPSLSDVAQVAGLLAERALLMRGL*
Ga0068869_1008071451	3300005334	Miscanthus Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL
Ga0070692_112490121	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GVSGRQASESLAAGNLKPLSEQPSGVWVSLDQARALVELYAEKGDRKFERAALRYFCRYLDEANPSLVDVAQVAALLAERDSMMRGL*
Ga0070669_1015306322	3300005353	Switchgrass Rhizosphere	RALAARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLTRGL*
Ga0070675_1016073781	3300005354	Miscanthus Rhizosphere	MFVTSDGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRFMDESDPSLADVAQVAGLLAERALLMRGL*
Ga0070671_1013431662	3300005355	Switchgrass Rhizosphere	MFVTSEGRPGARLQRALAARNLTAAEQAAFEIPFISLAQARELVELYAEKDDPKYERAALKYLTRYTGEEQPASTRSARLQ*
Ga0070700_1001805572	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MFVTSEGRPDARLQRALAAGNLTAAEQAAFEIAARELVELYAEKGGPKYDRAALEYLTRSMAEGNPSLADVAQIAAVLAERGLLMRGL*
Ga0068867_1004694131	3300005459	Miscanthus Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLAQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQITAVLAERGLMMRGL*
Ga0070685_100515021	3300005466	Switchgrass Rhizosphere	VTSESRPGARLQRALAARNLTSAKQAAFEIPFISLAQARELVELYAEKGDPKYERAALKYLTRYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0070685_103223931	3300005466	Switchgrass Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLEQARELVELYAEKGDAKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLMRGL*
Ga0070685_106831211	3300005466	Switchgrass Rhizosphere	VFVTAEGCPAARFRRAVERGNLTAAEQAAFELAFVSLADARALLELYAEKGDRKYERAALKYLRRYLDEAGPSLADVAQVAAVLAERHLLMRGR*
Ga0070684_1003638833	3300005535	Corn Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLVQARELVELYAEKGDAKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLMMRGL*
Ga0070672_1010248521	3300005543	Miscanthus Rhizosphere	PGARLQRALAARNLTAAEQAAFEIAARELVELYAEKGGPKYDRAALEYLTRSMAEGNPSLADVAQIAAVLAERGLLMRG*
Ga0070695_1015728721	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYMAETSPSLADVAQVAAVLAERGLLMCGL*
Ga0070696_1016032711	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AGARLRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFDRAALRYLRRYLEEADPSLADVAGVAAVLAERAVLMRGS*
Ga0068852_1012197612	3300005616	Corn Rhizosphere	MFVTSDGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRYMDESDPSLADVAQVAGLLAERALLMRGL*
Ga0068863_1015107551	3300005841	Switchgrass Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLMRGL*
Ga0068860_1003371983	3300005843	Switchgrass Rhizosphere	ICGNVCSVTSEGRPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0075422_102384342	3300006196	Populus Rhizosphere	LRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFERAALRYLRRYLEEADPSLADVAGVAAVLAERAVLMRGS*
Ga0074049_109062391	3300006580	Soil	VTAEGRPGPRFRRAIERGNLTAAEQAAFELAFVSLADARALLELYAEKGDRKYERAALKYLRRYLDEAGPSLADVAQVAAVLAERHLLMRGR*
Ga0068865_1014807851	3300006881	Miscanthus Rhizosphere	MFVTSDGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAGKGDRKYERAALKYLRRYMDESDPSLADVAQVAGLLAERALLMRGL*
Ga0068865_1016350301	3300006881	Miscanthus Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYMAEGNPSLADVAQIAAVL
Ga0075424_1016932672	3300006904	Populus Rhizosphere	VTSDGHAGARLRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFERAALRYLRRYLEEADPSLADVAGVAAVLAERAVLVRCS*
Ga0075419_105573852	3300006969	Populus Rhizosphere	VTSEGHPGARLQRALAARNLAAAEQAAFEIAFISLSDARELVELYAEKGDPKYERAALKYLSRYLAEEGPSLMDLAQVAGLLAERSMLMRGL*
Ga0105245_124875502	3300009098	Miscanthus Rhizosphere	HHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRYMDESDPSLADVAQVAGLLAERALLMRGL*
Ga0075418_108407591	3300009100	Populus Rhizosphere	VTSEGHPSARLQRALAARNLTAAEQAASELAFVPLAQARALVELYAEHGDAKYERAALKYLSRYMTEGKPSLADVAQVAAILAERNLIMRGL*
Ga0105243_120156261	3300009148	Miscanthus Rhizosphere	MFVTSECRPGARLQRALAARNLTAAEQAAFEIAFVSLAQARELVELYAEKGDPKYERAALKYLARYLAEGNPSLADVAQIAAVLAARGLLMRGL*
Ga0105237_116709841	3300009545	Corn Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLEQARRLVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLTRGL*
Ga0105238_120286681	3300009551	Corn Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAERGDPKYERAALRYLTRYLAEGNPSLADVAQIAAVLAERGLLMRG*
Ga0105249_103077893	3300009553	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLARYMAEGSPSLADVAQIAA
Ga0105249_105195752	3300009553	Switchgrass Rhizosphere	MWERVFVSSDGHAGARLRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFERAALRYLRRYLEEADPSLADVAGVAAVLAERAVLMRGS*
Ga0105249_127594181	3300009553	Switchgrass Rhizosphere	VTSEGHPGARLQRALAAGNLIAAEQAAFEIAFVPLAEARLLVELYAEKGDRKYERAALKYLARYMEEEKPSLADVAQVAALL
Ga0126377_101296382	3300010362	Tropical Forest Soil	MFVTADGHPGARLRRALENRNLTAAEQAAFDVPYVPLAEARELVELYAEKGDPKYERAALKYLVRYMTEASPSLMDVAQLAALLAERGLLMRGL*
Ga0134125_119004012	3300010371	Terrestrial Soil	MFVTSEGHPGARLQRALAAGNLIAAEQAAFEVAFVPLAQAGELVELYADKGDPKFERATLKYLTRYLDEAAPSLADVAQVAALLAERALLMRGL*
Ga0134127_104845933	3300010399	Terrestrial Soil	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAV
Ga0134121_130777132	3300010401	Terrestrial Soil	MFVTSEGRPAARLQRALAARNLAAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0134123_107090962	3300010403	Terrestrial Soil	VFVTSEGHPGARLQRALATRNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0151490_16277361	3300011107	Soil	MFVTSEGRPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0105246_101968182	3300011119	Miscanthus Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0105246_103670103	3300011119	Miscanthus Rhizosphere	VTSGGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRYLNESDPSLADVAQVAGLLAERALLMRGL*
Ga0157285_103352871	3300012897	Soil	VTSEGHPGARLQRALAARNVTAAEQAAFEIAFISLTDARELVELYAEKGDPKYERAALKYLSRYLAEESPSLMDLAQVAGLLAERSMVMRGL*
Ga0157283_100103382	3300012907	Soil	MWERVFVASDGHAGARLRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFERAALRYLRRYLEEADPSLADVAGVAAVLAERAVLMRGS*
Ga0164241_100228986	3300012943	Soil	LKLLAAGNLTAAEQAAFEMPFVALVEARALVELYAEKGDRKYERAALKYLRRYLEESDPSLVDVAQVAAMLAERALLMRGL*
Ga0164241_100624935	3300012943	Soil	MFVTSEGHPGARLQRALAAGNLTAAEQAAFEAPFVPLVEARALVELYAEKGDRKYERAALKYLRRYLEEADPPLVDVAQVAAVLAERALLIRGL*
Ga0164241_101301602	3300012943	Soil	VTSEGHPGARLQQALASGNLTAAEQAAFEVAFVPLPEARGLVELYAEKGHPKYERAAMKYLRRLMDEQDPSLADFVQVAAILAERGMVIRGL*
Ga0164299_101037722	3300012958	Soil	MFVTSEGRPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAAKGDPKYERAALKYLTRYMTEGSPSLADVAQIAGVLAERGLLMRGL*
Ga0164299_105828141	3300012958	Soil	LYRRVRTYVRDLRGQTRRTRLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0164302_114008932	3300012961	Soil	MFVTWEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0164309_113834892	3300012984	Soil	MFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLARYLAEGNPSLSDVAQIAAVLAERGLLMRGL*
Ga0163162_102275302	3300013306	Switchgrass Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLAQARELVELYAEKGDAKYERAALKYLARHMAEGGPSLSDVAQIAAVLAERGLMMRGL*
Ga0157375_102696623	3300013308	Miscanthus Rhizosphere	VTAEGRPGPRFRRAIERGNLTAAEQAAFELAFVSLGDAGALLELYAKKGDRKYERAALKYLRRYMDEAGPTLADVAQVAAVLAERHLLMRGR*
Ga0157375_105123272	3300013308	Miscanthus Rhizosphere	VTSEGRPGARLQRALAARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLMMRGL*
Ga0157375_107868122	3300013308	Miscanthus Rhizosphere	MFVTSDGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRYMDESHPSLADVAQVAGLLAERALLMRGL*
Ga0163163_114579512	3300014325	Switchgrass Rhizosphere	VTSGGHHGARLQRALAVGNLTAAEQAAFEVGFVPLEQARALVELYAEKGDRKYERAALKYLRRYMDESDPSLADVAQVAGLLAERALLMRGL*
Ga0163163_116829302	3300014325	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAVGNLTAAEQAAFEIPFISLAQARALVELYAEKGDRKFERAALKYLARYLSEASPSLVDVAQVAALLAER
Ga0157380_102316543	3300014326	Switchgrass Rhizosphere	VFVTSEGHPAARLQRALAARNLTAAEQAAFEIAFISLALARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERELLMRGL*
Ga0157380_102960231	3300014326	Switchgrass Rhizosphere	VFVTSEGHPGARLQSALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLARYMAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0157380_112251321	3300014326	Switchgrass Rhizosphere	VTSQDAPGTRLRRALAAGNLAAAERAAFEIAFISLSEARELVELYAEQGDPKYERAALKYLTRYLAEESPSLMDLAQVAGLLAERSMLMRGL*
Ga0157380_118677101	3300014326	Switchgrass Rhizosphere	VTSEDPPGARLQRALAARNLAAAEQAASEIAFISLSNARELVELYAEKGDPKYERAALKYLSRYLAEERPSLLDIAQVAGLLAERSMLMRGL*
Ga0157380_124008751	3300014326	Switchgrass Rhizosphere	VTAEGRPGPRFRRAIEPGNLTAAEQAAFELAFVSLGDAGALLELYAKKGDRKYERAALKYLRRYMDEAGPTLADVAQVAA
Ga0157379_103333802	3300014968	Switchgrass Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLVQARELVELYAEKGDAKYERAALRYLARFLAEGSPSLSDVAQIAVVLAERGLMMRGL*
Ga0157376_104803701	3300014969	Miscanthus Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLEQARELVELYAEKGDAKYERAALRYLARFLAEGRPSLSDVAQIAAVLAERGLLMRGL*
Ga0132258_100917279	3300015371	Arabidopsis Rhizosphere	VTSQGHPGARLQRALAAGNLTAAEQAAFEVPFIPLEQARKLLELYAEKGDPKYERAALRYLHRYLDETTEPSLVDVAQVAGLLAERALLIRGL*
Ga0132258_101917191	3300015371	Arabidopsis Rhizosphere	MFVTSEGHPGARLQRALAVGNLVAAEQAAFEIAFVPLPEARLLVELYAEKGDRKYERAALKYLARYMEEEKPSLIDVAQ
Ga0132258_107595731	3300015371	Arabidopsis Rhizosphere	VTSEGHPGARLQRALAAGNIVAAEQAAFEVLFVPLTEARALVELYAEKGDRKFERAALKYLRRYLDEADPSLTDVDQ
Ga0132258_115022141	3300015371	Arabidopsis Rhizosphere	VFVTSEGHTGARLQRALAAGNIVAAEQGAFEVPFVPLTEARALVELYAEKGDRKFERAALKYLRRYLEEADPSLVDVAQVAALLAERDLMMRGR*
Ga0132256_1001837322	3300015372	Arabidopsis Rhizosphere	MFVTSEGHPGARLQRALAVGNLVAAEQAAFEIAFVPLPEARLLVELYAEKGDRKYERAALKYLARYMEEEKPSLIDVAQVAALLAERSRLMRGL*
Ga0132257_1000684134	3300015373	Arabidopsis Rhizosphere	MFVTSEGHPGARLQRALAVGNLVAAEQAAFEIAFVPLPEARLLVELYAEKGDRKYERAALKYLARYMEEEKPSLIDVAQVAALLAERSRMMRGL*
Ga0132257_1005729511	3300015373	Arabidopsis Rhizosphere	VFVTSEGHPGPRLQRALAAGNIVAAEQAAFEVAFVPLTEARALVELYAEKGDRKYERAALKYLRRYLDEANPSLVDVAQVAALLAERDLMRGL*
Ga0132257_1010486631	3300015373	Arabidopsis Rhizosphere	VFVTSEGHRGTRLQRALAAGNIVAAEQGAFEVPFVPLTEARALVELYAEKGDRKFERAALKYLRRYLEEADPSLVDVAQVAALLAERDLMMRGR*
Ga0132255_10003352510	3300015374	Arabidopsis Rhizosphere	VTSESRPGARLQRALAARNVTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL*
Ga0132255_1036994711	3300015374	Arabidopsis Rhizosphere	VTSEGHPGARLRRALAAGNLTAAEQAAFEVAFVPLAQARALVELYAEKGDRKFERAALKYLRSYLDETKPSLVDVAPVAGLLAERALLMRGL*
Ga0132255_1043839211	3300015374	Arabidopsis Rhizosphere	VFVTSEGHPGARLQRALAAGNIIAAEQAAFEVAFVPLTEARALVELYAEKGDRTYERAALKYLRRYLDEPNPSLVDVAQVAALLAERDLMMRGL*
Ga0190266_101079271	3300017965	Soil	VTSEGHPGARLQRALAARNVTAAEQAAFEIAFISLTDARELVELYAEKGDPKYERAALKYLSRYLAEESPSLMDLAQVAGLLAERSMVMRGL
Ga0190268_107997412	3300018466	Soil	VTSEGHPGARLQRALAAGNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLSRYLAEEHPSLMDLAQVAGLLAERSMLMRGL
Ga0190270_103336821	3300018469	Soil	AAGNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLSRYLAEESPSLMDLAQVAGLLAERSMLMRGL
Ga0190270_106158433	3300018469	Soil	VFVTSEGHPGARLQRALAVGNLAAAEQAAFEVAFVPLAQARALVELYAEKGDPKYERAALRYLARYLTEGAPSLADVAQMAALLAERSLIMRGL
Ga0190270_126781991	3300018469	Soil	VISEGHPGARLQRALAVGNLTAAEQAAFEVAFVPLAQVRALVELYAEKGNPKYERAALKYLSRYLTEGSPSLADVAQMAALLAERGMLMRGL
Ga0190270_131779462	3300018469	Soil	RTFVTSEGHPGARLQRAFAARNLTAAEQAAFEMAFISLADARELVELYAEKGDPKYERAALKYLSRYLAEEDPSLMDLAQVAGLLAERSMLMRGL
Ga0190274_104074302	3300018476	Soil	VTSEDPPGARLQRALAARNLAAAEQAAFELAFISLAEARELVELYAENGDPKYERAALKYLSRYLAEESPSLMDLAQVAGLLAERSMVMRGL
Ga0190274_110424422	3300018476	Soil	VTSEGHPGARLQRALAAGNLTAAEQAAFEVAFVPLAQARSLVELYAEKGDPKYERAALKYLARYLTEGSPSLADVAQMAALLAERSLIMRGL
Ga0190274_117377401	3300018476	Soil	VTSDGHPGARLQCALAVGNLTAAEQAAFEVAFVPLAQARSLVELYAEKGDPKFERAALKYLIRYLTEGNPSLADVAQMAALLAERSLM
Ga0190271_105841502	3300018481	Soil	MFVTSEGPPGERLQRALAARNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLSRYLAEESPSLMDLAQVAGLLAERSMLMRGL
Ga0190267_109683981	3300019767	Soil	VTSEGHPGARLQRALAAGNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLARYLAEESPSLMDLAQVAGLLAERSMLMRGL
Ga0247787_10086422	3300022893	Soil	TSDGHAGARLRAALAVGNLTAAEQAAFEVPFVPLTEARALLELYAEQGEPKFERAALRYLRRYLDEADPSLADVAGVAAVLAERAVLMRGS
Ga0207688_102776052	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLTRGL
Ga0207645_106140062	3300025907	Miscanthus Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLAQARELVELYAEKGDAKYERAALRYLARYLAEESPSLSDVAQIAAVLAERGLMIRGL
Ga0207670_106872672	3300025936	Switchgrass Rhizosphere	AARNLTSAEQAAFEIAFVSLVQARELVELYAEKGDVKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLMMRGL
Ga0207670_109246462	3300025936	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAERGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL
Ga0207704_111683501	3300025938	Miscanthus Rhizosphere	VFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLEQARRLVELYAEKGDAKYERAALRYLARFLAEGSPSLSDVAQIAAVLAERGLLMRGL
Ga0207704_116301712	3300025938	Miscanthus Rhizosphere	MFVTSEGRPVARLQRALAARNLTAAEQAAFEIAARELVELYAEKGGPKYDRAALEYLTRSMAEGNPSLADVAQIAAVLAERGLLMRGL
Ga0207712_102187841	3300025961	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLARHMAEGGPSLSDVAQIAAVLAERGLLVRGL
Ga0207678_108214042	3300026067	Corn Rhizosphere	VTSEGRPGARLQRALAARNVTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL
Ga0207648_110238091	3300026089	Miscanthus Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQI
Ga0207676_122517861	3300026095	Switchgrass Rhizosphere	VFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGNPSLADVAQIAAVLAERELLMR
Ga0207675_1009244621	3300026118	Switchgrass Rhizosphere	VTSEGRPGARLQRALAARNVTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLARYMAEANPTLADVAQIAAVLAERGLLMRGL
Ga0208761_10349091	3300026995	Soil	AARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALKYLTRYMAEGSPSLADVAQIAGVLAERGLLMRGL
Ga0247828_102812411	3300028587	Soil	VTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLTDARELVELYAEKGDPKYERAALKYLSRYLAEENPSLMDLAQVAGLLAERSMLMRGL
Ga0247822_115643682	3300028592	Soil	MFVTSEGHPGARLQRALAAGNLTAAEQAAFEIPFIPLASARALVELYAEKGDPKFERAALKYLARYLAEGKPSLTDVAQVAALLAERSMLMRGL
Ga0247821_111155461	3300028596	Soil	MFVTSEAHPGARLQRALAARNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLSRYLAEESPSLMDLAQIAGLLAERSLLMQGL
Ga0307503_100507933	3300028802	Soil	VFVTAEGRPGARFSRAVERGNLTAAAEQAAFELAFVALADARALVELYAEKGDRKYERAALKYLRRYLDEAGPSLADVAQVAAVLAERHLLMRGR
Ga0307503_102281981	3300028802	Soil	VTSESRPGARLQRALAARNLTSAKQAAFEIPFISLAQARELVELYAEKGDPKYERAALGYLTRYMAEENPSLADLAQITAVLAERGLLMRGL
Ga0307503_105238432	3300028802	Soil	MFVTSEGRPGARLQRALAARNLTAAEQAAFEIAFVSLAQARELVELYAEKGDPKYERAALKYLARYLAEGNPSLADVAQIAAVLAERGLLMRGL
Ga0247825_106984262	3300028812	Soil	MCERRFVTSEGHPGARLQRALAARNLTAAEQAAFEIAFISLTDARELVELYAEKGDPKYERAALKYLSRYLAEENPSLMDLAQ
Ga0247827_105276932	3300028889	Soil	MFVTSEGHPGARLQRALAAGNLTAAEQAAFEIPFIPLASARALVELYAEKGDPKFERAALKYLARYLAEGKPSLTDVAQVAALLAERSM
Ga0247826_101686773	3300030336	Soil	MFVTSEGHPGARLQRALAAGNLTAAEQAAFEIPFVPLASARALVELYAEKGDPKFERAALKYLARYLAEGKPSLTDVAQVAALLAERSMLMRGL
Ga0247826_110103251	3300030336	Soil	MCERTFVTSEGHPGARLQRALAARNLTAAEQAAFEIVFISLADARELVELYAEKGDPKYERAALKYLSRYLAEERPSLMDLAQVAGLLAERSMLMRGL
Ga0307506_103260142	3300031366	Soil	MFVTSEGRPGARLQRALAARNLTSAEQAAFEIAFISLEQARELVELYAEKGDRKYERAALKYLARYMAEGSPSLADVAQIAAVLAERGLLIRGL
Ga0310887_106973991	3300031547	Soil	VTSEGHPGARLQRALAAGNLIAAEQAAFEIAFVPLAEARLLVELYAEKGDRKYERAALKYLARYMEEEKPSLADVAQVAALLAERGLVMRGL
Ga0310906_105179192	3300032013	Soil	MFVTSEGRPGARLQRALAAGNLTAAEQAAFEIPFIPLASARALVELYAEKGDPKFERAALKYLARYLAEGKPSLTDVAQVAALLAERSMLMRGL
Ga0310890_115536502	3300032075	Soil	VTSEGHPGARLQRALAAGNLTAAEQAAFEIAFISLADARELVELYAEKGDPKYERAALKYLARYLAEESPSLMDLAQVAGLLAERSMMMRGL
Ga0310890_117278762	3300032075	Soil	RLQRALAAGNLTAAEQAAFEVAFVPLEQARALVELYAEKGDRKYERAALKYLGRYLSESDPSLAEVAQVTSVLAERALLMRGL
Ga0310895_105021232	3300032122	Soil	TSEGHPGARLQRALAARNLTAAEQAAFEIAFISLAQARELVELYAEKGDPKYERAALRYLTRYLAEGSPSLADVAQIAAVLAERGLLMRGL
Ga0307470_112881632	3300032174	Hardwood Forest Soil	VTSDGRPGPRFRRAIERSNLTAAEQAAFELAFVSLADARALLELYAVKGDPKYERAALKYLRRYLDEARPTLADTAQVAAVLAERHLLMQGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067899

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences