NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067784

Metagenome / Metatranscriptome Family F067784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067784
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 70 residues
Representative Sequence LLCAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Number of Associated Samples 115
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.20 %
% of genes near scaffold ends (potentially truncated) 86.40 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.400 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.600 % of family members)
Environment Ontology (ENVO) Unclassified
(32.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.400 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.50%    β-sheet: 0.00%    Coil/Unstructured: 62.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00490ALAD 68.00
PF01676Metalloenzyme 1.60
PF06415iPGM_N 0.80
PF03309Pan_kinase 0.80
PF14559TPR_19 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0113Delta-aminolevulinic acid dehydratase, porphobilinogen synthaseCoenzyme transport and metabolism [H] 68.00
COG0696Phosphoglycerate mutase (BPG-independent), AlkP superfamilyCarbohydrate transport and metabolism [G] 0.80
COG1521Pantothenate kinase type IIICoenzyme transport and metabolism [H] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.40 %
UnclassifiedrootN/A1.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17021993All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1431Open in IMG/M
2189573001|GZR05M101BNUUZNot Available500Open in IMG/M
2189573001|GZR05M102HROC7All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300000956|JGI10216J12902_112348480All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300001431|F14TB_101553641All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300005093|Ga0062594_100190066All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300005178|Ga0066688_10058833All Organisms → cellular organisms → Bacteria2247Open in IMG/M
3300005181|Ga0066678_10903579All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005289|Ga0065704_10762354All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005290|Ga0065712_10222081All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1038Open in IMG/M
3300005293|Ga0065715_10042485All Organisms → cellular organisms → Bacteria1400Open in IMG/M
3300005295|Ga0065707_10399770All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300005332|Ga0066388_100302004All Organisms → cellular organisms → Bacteria2246Open in IMG/M
3300005332|Ga0066388_101344728All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300005332|Ga0066388_106645177Not Available583Open in IMG/M
3300005332|Ga0066388_107936262All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005434|Ga0070709_10118463All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1791Open in IMG/M
3300005435|Ga0070714_100592904All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300005435|Ga0070714_101933291All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005436|Ga0070713_101137797All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005450|Ga0066682_10600783All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005454|Ga0066687_10347679All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300005466|Ga0070685_10195958All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300005535|Ga0070684_100302482All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300005539|Ga0068853_102063902All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium553Open in IMG/M
3300005544|Ga0070686_101026405All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium678Open in IMG/M
3300005548|Ga0070665_101599778All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005553|Ga0066695_10755616All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300005554|Ga0066661_10536670All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005559|Ga0066700_10704636All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005618|Ga0068864_100996274All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300005713|Ga0066905_100169075All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300005719|Ga0068861_100624588All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300005764|Ga0066903_104340408All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium758Open in IMG/M
3300005764|Ga0066903_105736060All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005842|Ga0068858_101279064All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300005844|Ga0068862_101613800All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium656Open in IMG/M
3300006358|Ga0068871_102149844All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium532Open in IMG/M
3300006797|Ga0066659_10719421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium818Open in IMG/M
3300006854|Ga0075425_101447546All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300007265|Ga0099794_10144117All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300009101|Ga0105247_10393956All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300009156|Ga0111538_12049176All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300009176|Ga0105242_13108651All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300009792|Ga0126374_10815879All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium714Open in IMG/M
3300010043|Ga0126380_10770463All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300010301|Ga0134070_10068263All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300010326|Ga0134065_10218492All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300010361|Ga0126378_10251644All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1860Open in IMG/M
3300010362|Ga0126377_10271937All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1659Open in IMG/M
3300010366|Ga0126379_11558710All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300010397|Ga0134124_12586778All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010999|Ga0138505_100027475All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300012207|Ga0137381_11616881All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300012208|Ga0137376_11696969All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium522Open in IMG/M
3300012361|Ga0137360_10808829All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300012512|Ga0157327_1004104All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300012911|Ga0157301_10466700All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012929|Ga0137404_11083452All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium735Open in IMG/M
3300012957|Ga0164303_10534658All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012960|Ga0164301_10555006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium839Open in IMG/M
3300012975|Ga0134110_10450203All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012985|Ga0164308_10889431All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300012989|Ga0164305_12069930All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300013296|Ga0157374_10860360All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300013297|Ga0157378_11715786All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300014056|Ga0120125_1125977All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300015264|Ga0137403_11463791All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300015372|Ga0132256_103230920All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300015374|Ga0132255_101000836All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300016357|Ga0182032_10027033All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3440Open in IMG/M
3300016357|Ga0182032_11304510All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300018071|Ga0184618_10167286All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300018465|Ga0190269_11891210All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300019361|Ga0173482_10129530All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300019362|Ga0173479_10690070All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300019873|Ga0193700_1066347All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium542Open in IMG/M
3300019886|Ga0193727_1161176All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300020012|Ga0193732_1086239All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300020018|Ga0193721_1023982All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1613Open in IMG/M
3300020062|Ga0193724_1092322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium620Open in IMG/M
3300021344|Ga0193719_10036303All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2131Open in IMG/M
3300021510|Ga0222621_1048358All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium890Open in IMG/M
3300022694|Ga0222623_10148786All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300025271|Ga0207666_1007845All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300025905|Ga0207685_10368839All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300025905|Ga0207685_10690841All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300025906|Ga0207699_10679292All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300025909|Ga0207705_10067635All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2586Open in IMG/M
3300025915|Ga0207693_10404179All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300025927|Ga0207687_11598558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300025931|Ga0207644_10968979All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300025940|Ga0207691_10082152All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2895Open in IMG/M
3300025941|Ga0207711_11061083All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium750Open in IMG/M
3300025941|Ga0207711_11943417All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300025944|Ga0207661_11123044All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300026067|Ga0207678_11911393All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300026078|Ga0207702_10078225All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2863Open in IMG/M
3300026088|Ga0207641_10106964All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2473Open in IMG/M
3300026142|Ga0207698_12401445All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium538Open in IMG/M
3300026523|Ga0209808_1293210All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300027461|Ga0207601_111171All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300028065|Ga0247685_1045597All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300028380|Ga0268265_11534876All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium670Open in IMG/M
3300028381|Ga0268264_10011476All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus7315Open in IMG/M
3300028381|Ga0268264_10942527All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300028708|Ga0307295_10017827All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1722Open in IMG/M
3300028715|Ga0307313_10170843All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300028791|Ga0307290_10174756All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300028810|Ga0307294_10032004All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300028811|Ga0307292_10024318All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2154Open in IMG/M
3300028824|Ga0307310_10180177All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300028875|Ga0307289_10390524All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M
3300030916|Ga0075386_12177916All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300031231|Ga0170824_122809217All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300031469|Ga0170819_12495400All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300031474|Ga0170818_106135424All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300031538|Ga0310888_10238503All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300031740|Ga0307468_101477372All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300031943|Ga0310885_10851207All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium520Open in IMG/M
3300032001|Ga0306922_10922468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium906Open in IMG/M
3300032013|Ga0310906_11258957All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300032261|Ga0306920_103110944All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300032421|Ga0310812_10305447All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300033551|Ga0247830_10740710All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium781Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.60%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.40%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.40%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.40%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.60%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.60%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.80%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2189573001Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012512Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510Host-AssociatedOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300027461Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-E (SPAdes)EnvironmentalOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_011714702088090014SoilMASEIAEFFVGTTDETTSFFTCRRLKNSATTLLENSAVRSRAGLETRCLDANASFAYELLTSINK
FD2_075286102189573001Grass SoilALFCAAFEIAEFFAGTTDETTSFFTCRRLKNSATTLLEKSEVGIRAGLETRSLDANASFAYELLTSITK
FD2_056873002189573001Grass SoilPFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSPDANASFAYELLISTNK
JGI10216J12902_11234848013300000956SoilSFSFQSSQSTCALLCAPCEIAEFFVGTTDETTSLLTCRRLKNSATTLPESSAVGIRAGLETRSLDANASFAYELLTSINK*
F14TB_10155364123300001431SoilCALLRAAFEIAAFFVGTTDETTSFFTCRCLKNSATTLLESSAAGIRAGLETRSLDANASFAYVLLTSITK*
Ga0062594_10019006623300005093SoilMTEFFAGTTEETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK*
Ga0066688_1005883343300005178SoilIAEFFVGTTDETTTFLTCRCLKNSATILLESSAVWIHTGLETRSLDANASFAYELLTSINR*
Ga0066678_1090357913300005181SoilFFVGTTDETTSFFTCRRLKNSATTRLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0065704_1076235413300005289Switchgrass RhizosphereAEFFVGTTDETTSFFTCRRPKNSATTPLESFAVEICAGLETRCFDANAIFAYELLTSINK
Ga0065712_1022208113300005290Miscanthus RhizosphereMTEFFAGTTEETTSFFTRRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK*
Ga0065715_1004248523300005293Miscanthus RhizosphereLLCAAFEIAEFFVGTTDETTSFFTCRRLKNSATTLLESSEVGTRAGLETRSLDANASFAYELLTSINK*
Ga0065707_1039977013300005295Switchgrass RhizosphereSFSFQSSQSTCALLRAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLISINK*
Ga0066388_10030200413300005332Tropical Forest SoilSTCTLLCAAFEIAEFFVGTTDETTSFLIRRCLKNSVTTLLERSPVWIRAGLETRPLDANAIFAYELLTSINK*
Ga0066388_10134472813300005332Tropical Forest SoilTFMFLCAALEMAAFFAGTTDETTSSFTCRRLKNSTTTLLENSAVAIRVGLEIRSLDANASFAYELLISINK*
Ga0066388_10664517723300005332Tropical Forest SoilIAEFFAGTTDETTSLFTSRRLKNSVTTLPESSAVGICVGLETRFLDANASFAYELLISINK*
Ga0066388_10793626213300005332Tropical Forest SoilSQSICVLLCAPFEIATCFVGTTDETTSFFTWRRLRNSATTMLESSAVGIRAGLETRSLDANASFAYELLTSINK*
Ga0070709_1011846333300005434Corn, Switchgrass And Miscanthus RhizosphereSFQSSQSTCALLCAAFEIAEFFVGTTEETTSFFTCRRLKNSATTLLESAEVGTSVGLETRSLDANASFAYELLTSINR*
Ga0070714_10059290423300005435Agricultural SoilLLCAAFEIAEFFVGTTEETTSFFTCRRLKNSATTLLESAEVGTSVGLETRSLDANASFAYELLTSINR*
Ga0070714_10193329113300005435Agricultural SoilRAAFEIAEFFVGTTDETTTLFTCRRLKNSATTLLESSEVGIRVGLETCSLDANASFA*
Ga0070713_10113779713300005436Corn, Switchgrass And Miscanthus RhizosphereSQSTGAVSRAAFEIAEFFVGTTDETTSFFTCRRLKKSATTLVESSAVGIRAGLETRSFDANAIFAYELLTSINK*
Ga0066682_1060078323300005450SoilTCALLCAAFEIAEFFVGATDETTTFFTCRRLKNSATVLLESSAVGIRAELETRSLDANASFAYELLTSINK*
Ga0066687_1034767933300005454SoilCAAFEISEFFAGTTDEMTSLFTARRLKNSATTLFESSAVGIRAGVETRCLDANASFTYELLTSINK*
Ga0070685_1019595823300005466Switchgrass RhizosphereHSTCALLCAAFEMTEFFAGTTEETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK*
Ga0070684_10030248213300005535Corn RhizosphereIAGFFVGTTDETTTLSTCRHLKNSATTLLEISDVRIRTGLQTRALDANASFAYELLTSINK*
Ga0068853_10206390213300005539Corn RhizosphereAATFARRSAPIDSGLGYSIVTPIFSFQFSQSTCTLLRAAFEIAEFFAGTTDEMTSFCTCRRRKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0070686_10102640513300005544Switchgrass RhizosphereVTPSFTFEFSQSTCAWLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLLEISAVRIRTGLETRALDANASFAYELLTSINK*
Ga0070665_10159977823300005548Switchgrass RhizosphereLLCAAFEIAEFFVGTTDEMTSFLTCRCFKNLATKLLESSEVGTRTRLETRSLDANASFA*
Ga0066695_1075561613300005553SoilVTPSFSFQSSQSTCALLCAAFEIAEFFVGTTDETTSFFTCRRLKNSATTLLESSEVRIRAGLETRSLDANASFAYELLTSINK*
Ga0066661_1053667013300005554SoilPSFSFQSSQSTCVLLCAAFEIAAFFVGTTDETTSFFTCRRLKNSATTQLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0066700_1070463613300005559SoilFAGTTDEMTSLFTARRLKNSATTLFESSAVGIRAGVETRCLDANASFTYELLTSINK*
Ga0068864_10099627423300005618Switchgrass RhizosphereFQSNQSTCALLCAAFEIAEFFVGTTEETTSFFTCRRLKNSATTLLESAEVGTSVGLETRSLDANASFAYELLTSINK*
Ga0066905_10016907513300005713Tropical Forest SoilIAEFFVGTTDETTSFFTCRRSKNSATTALERFAVEICAGLETRCFDANAIFAYELLTSINK*
Ga0068861_10062458813300005719Switchgrass RhizosphereGTTDETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK*
Ga0066903_10434040813300005764Tropical Forest SoilMATPSFSFQSSQSTCALLCAAFEIAEFFAGTTDETTSFVTGRRFKNSVITLLESSAVGIRAGLETRCLDANASFTYELLTSINK*
Ga0066903_10573606023300005764Tropical Forest SoilLSWSFQSSQSTCALLCAAFEIAEFFVGTTDETTSFFTCRRLKNSATTLLESSAVGIRAGLETRSLDAKASFAYELLTSINK*
Ga0068858_10127906413300005842Switchgrass RhizosphereLCAALKIAGFFVGTTDETTTLFTCRRLKNSATTLLEISAVRIRTGLETRALDANASFANELLTSINK*
Ga0068862_10161380013300005844Switchgrass RhizosphereTPRLSFQFSQSTCALLRAAFEIAEFFVGTTDETTSFFTARRLKNSAITLLESSAVGIRLGWDNRSLDANATFAYELLISINK*
Ga0068871_10214984423300006358Miscanthus RhizosphereARLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLLEISAVRIRTGLETRAVDANASFAYELLTSIKK*
Ga0066659_1071942123300006797SoilIAIPSFSFQSSQSTCALLCAPFEIAEFFVGTTDETTSFFTCRRLKNSATKLPESSEVGIRAGLETRSPDANASFAYELLTSINK*
Ga0075425_10144754613300006854Populus RhizosphereIAEFFVGTTDETTSFFTCRRLKNSPTTLLERFAVEIRAALETRCLDANAIFAYELLTSINK*
Ga0099794_1014411713300007265Vadose Zone SoilSFSFQSSQSTCALLCAAFEIPEFIVGATDETTSFFTCRRLKNSATMLLESSDVGIRAGVDTRSFDANASFAYELLISINK*
Ga0105247_1039395613300009101Switchgrass RhizosphereSFQFSQSTCTLLRAAFEIAEFFAGTTDEMTSFCTCRRRKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0111538_1204917613300009156Populus RhizosphereSQSTCARLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLVEISAVRIRTGLETRALDANASFAYELLTSINK*
Ga0105242_1310865113300009176Miscanthus RhizosphereTPSFTFEFSQSTCAWLCAALKIAGFFVGTTDETTTLFTCRRLTNFATTLVEISAVRIRTGLETRALDANASFANELLTSINK*
Ga0126374_1081587913300009792Tropical Forest SoilIVIPRFRFQSSQSTGALLRAAFEIAEFFVGTTDDTTSFFTCRRLKKSTTKMLESSAVGIGAVLETRFLDANASFAYELLTSINK*
Ga0126380_1077046323300010043Tropical Forest SoilFQSSQSTWALLCAPFEIAGFLVGTTDETTSFFTCRRLKKSTTKPLESSVVGIRAGFETRFLDANASFAYELLTSINK*
Ga0134070_1006826313300010301Grasslands SoilSTCALLCAPFEIAEFFVGTTDETTSFFTCRRLKNSATKLPESSEVGIRAGLETRSPDANAIFAYELLTSINK*
Ga0134065_1021849223300010326Grasslands SoilFESSQRTCALLCAAFEIAEFFIGATDETTTLFTCRRLKNSATVLLESSAVGIRAELETRSLDANASFAYELLTSINK*
Ga0126378_1025164433300010361Tropical Forest SoilFFVGTTDDTTSFFTCRRRKNLAIVLPESSAVGIRAGLKTCSLDANASFAYELLTSINK*
Ga0126377_1027193713300010362Tropical Forest SoilIAEFFVGTTDETTSVFTCRRLKNSATTLLESFAVEIRAALETRCLDANAIFAYELLISINK*
Ga0126379_1155871013300010366Tropical Forest SoilALFCAAFEIAEFFVGTTDETTSFFTCRRPKNSAITPLESFAVEICAGLETRCFDANAIFAYELLTSINK*
Ga0134124_1258677823300010397Terrestrial SoilALFCAAFEIAEFFVGTTDETTSVFTCRRPKNSATTPLENFAVEIRAGLETCCFDANAIFAYELLTSINK*
Ga0138505_10002747523300010999SoilAFEIAEFFVGTTEETTSFFTCRRLKNSATTLRESSEVGIRAGLETRSLDAKASFAYELLISINK*
Ga0137381_1161688123300012207Vadose Zone SoilFEIAEFFFGTTDETTSFVTCRRLKNSATTLLESSAVGIRAGLETRSPDAKASFVYELLTSINK*
Ga0137376_1169696913300012208Vadose Zone SoilIVTPSFSFQSSQSTCALSRAALKIAEFFVGTTDETTSFLTCRRLKNSATTRLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0137360_1080882923300012361Vadose Zone SoilFILQSNQSTSALLCTALEIAESFSGTTDDTTTFRTCRRRRNAATTLLESSPVAILTGADTRCFDATAIFAYELLTSINK*
Ga0157327_100410423300012512Arabidopsis RhizosphereIAEFFVGTTDETTTLSIWRRLKNSATTLLESFEVGIRAGLETCSLDENASFA*
Ga0157301_1046670013300012911SoilEFFVGTTDEATTLLTCRRVKNSATTLLEISEVRIRTGLETCALDANASFAYELLRSINK*
Ga0137404_1108345223300012929Vadose Zone SoilVTPSFSFQSSQSTGALLCAAFEIAEFFVGTTDETTSFFTCRRLKNSATTLLESSEVRIRAGLETRSLDANASFVYELLTSINK*
Ga0164303_1053465813300012957SoilIAEFFAGTTDETTSFFTCRCLKNLATKLLESFEVGTRARLETRSLDANASFA*
Ga0164301_1055500623300012960SoilLLRVAFEIAEFFVGPTDEKTSFFTARRLKNSAITLLESSAVGIRLGWDNRSLDANATFAYELLISINK*
Ga0134110_1045020313300012975Grasslands SoilIAEFFVGTTDEMTSFVTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0164308_1088943113300012985SoilEIAEFFVGTTDETTTLFICRRLKNSATTLLESFEVGIRAGLETCSLDANASFA*
Ga0164305_1206993023300012989SoilFFAGTTDETTSFFTCRRPKNSATTPLESFAVEIRAGLETCCFDANAIFAYELLTSINK*
Ga0157374_1086036023300013296Miscanthus RhizosphereCARLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLVEISAVRIRTGLETRAVDANASFAYELLTSIKK*
Ga0157378_1171578613300013297Miscanthus RhizosphereSFSFQSSQSTCALLCAAFEITEFFIGTTDETTSFFTCRRLKNPATTLLESSEVGILAGLETRSLDANASFAYELLTSINR*
Ga0120125_112597713300014056PermafrostLLCAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0137403_1146379113300015264Vadose Zone SoilFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK*
Ga0132256_10323092013300015372Arabidopsis RhizosphereSQSTCALLRAAFEIAEFFVGTTDETTTLFICRRIKNSATTLLESFEVGIRAGLETCSLDANASFA*
Ga0132255_10100083623300015374Arabidopsis RhizosphereFFVGTTDETTSFFTCRRLNNSATTLRESSEVGSRAGLETRSLDANASFAYELLTSINK*
Ga0182032_1002703313300016357SoilTCALFCAAFEIAEFFVGTTDETTSFFTCRRPKNSAITPLESFAVEICAGLETRCFDANAIFAYELLTSINK
Ga0182032_1130451023300016357SoilCAAFEIAEFFVGTTDETTSFSTSRRLKNSAITLLESSAVGSRAGLETRCVDANASFTYELLTSINR
Ga0184618_1016728613300018071Groundwater SedimentSSQSTCALLCAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGMETRSLDANASFAYELLTSINK
Ga0190269_1189121023300018465SoilSSQSTCALLCMASEIAEFFVGTTDETTSFFTCRCLKNSATTLLESSEVGIRAGFETRSLDANASFAYELLISINK
Ga0173482_1012953013300019361SoilTPIFSFQFSQSTCTLLRAAFEIAEFFAGTTDEMTSFCTCRRRKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0173479_1069007023300019362SoilTTDATTSFFTCRRRKNSATTPLERFAVEIRAGLETCCFDANAIFAYELLTSINK
Ga0193700_106634713300019873SoilVTPSFSFQSSQSTCALLRAALEITAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0193727_116117613300019886SoilIAEFFVGTTDETTSFFTARRLKNSATTLLETSEVGIRAGLETRSLDANASFAYELLTSIN
Ga0193732_108623913300020012SoilSFSFQSSQSTCALLRVAFEIAAFFVGTTDETTTLFTCRRLKNSATTLLESSEVGTRAGLETRSLDANASFAYELLTSINK
Ga0193721_102398223300020018SoilVTPSFSFQSSQSTCALLRAALEITAFFVGTTDETTSFFICRRVKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0193724_109232223300020062SoilVTPSLSFQSSQSTCALSRAAFEIAEFFVGTTDETTTLLICRRLKNSATTLLESSEVAIRAGLETRSVDANASFA
Ga0193719_1003630313300021344SoilEIAAFFVGTTEETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0222621_104835823300021510Groundwater SedimentVTPSFSFQSSQSTCALLRAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0222623_1014878613300022694Groundwater SedimentAFEIAESFVGTTDETTSFFTCRRLKNSATKLLESSAVGIRAGLETRSLDANASFAYELLTSINK
Ga0207666_100784533300025271Corn, Switchgrass And Miscanthus RhizosphereRLSFQFSQSTCALLRAAFEIAEFFVGTTDETTSFFTARRLKNSAITLLESSAVGIRLGWDNRSLDANATFAYELLISINK
Ga0207685_1036883913300025905Corn, Switchgrass And Miscanthus RhizosphereFEIAAFFVGTTDETTSFFTCRRLKNSATTLRESSEVGTRAGLETRSLDANASFAYELLTSINK
Ga0207685_1069084123300025905Corn, Switchgrass And Miscanthus RhizosphereSSQSTCALLCAAFEISEFFVGTTDEMTSFLTCRCFKNLATKLLESFEVGTRTRLETRSLDANASFA
Ga0207699_1067929213300025906Corn, Switchgrass And Miscanthus RhizosphereCALLCAAFEIAEFFVGTTEETTSFFTCRRLKNSATTLLESAEVGTSVGLETRSLDANASFAYELLTSINR
Ga0207705_1006763543300025909Corn RhizosphereIDSGFGYSIVTPIFSFQFSQSACTLLRAAFEIAEFFAGTTDEMTSFCTRRRRKNSATTLLESSDVGIRAGLETRSLDANASFAYELLTSINK
Ga0207693_1040417913300025915Corn, Switchgrass And Miscanthus RhizosphereSQSTCALLCAAFEIAEFFVGTTDETTTFLTCRCLKNSATIPLESPAVGIRTGLETRSLDANASFAYELLTSINK
Ga0207687_1159855823300025927Miscanthus RhizosphereVTPSFSFQSSQSTCALLCAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLRESSEVGTRAGLETRSLDANASFAYELLTSINK
Ga0207644_1096897923300025931Switchgrass RhizosphereCALLCATFEIAEFFVGTTEETTSFFTCRRLKNSATTLLESAEVGTSVGLETRSLDANASFAYELLTSINK
Ga0207691_1008215243300025940Miscanthus RhizosphereLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTPVEISAVRIRTGLETRALDANASFAYELLTSINK
Ga0207711_1106108313300025941Switchgrass RhizosphereVTPSFTFEFSQSTCAWLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLVEISAVRIRTGLETRAVDANASFAYELLTSINK
Ga0207711_1194341723300025941Switchgrass RhizosphereSFQFSQSTCTLLRAAFEIAEFFAGTTDEMTSFCTCRRRKNSATTLLESSEVGIRAGLESRSLDANASFAYELLTSINK
Ga0207661_1112304413300025944Corn RhizosphereCAWLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLLEISAVRIRTGLETRALDANASFAYELLTSINK
Ga0207678_1191139323300026067Corn RhizosphereFFVGTTDETTSLFISRRLKNAATTLLESSAVGIRTGLETRSLDAKAIFAYELLTSINK
Ga0207702_1007822543300026078Corn RhizosphereIAEFFAGTTDEMTSFCTCRRRKNSATTLLESSEVGIRAGLESRSLDANASFAYELLTSIN
Ga0207641_1010696423300026088Switchgrass RhizosphereMTEFFAGTTEETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSIN
Ga0207698_1240144523300026142Corn RhizosphereLCAALKIAGFFVGTTDETTTLFTCRRLKNFATTLLEISAVRIRTGLETRAVDANASFAYELLTSIKK
Ga0209808_129321013300026523SoilEIAEFFVGTTDETTSFFTSRHLKNSAITLPESSAVGMRAGLKTRSLDANASFAYELLTSINK
Ga0207601_11117123300027461SoilSHSTCALLCAAFEMTEFFAGTTEETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK
Ga0247685_104559713300028065SoilAEFFVGTTEETTSLSTRRRRKNSATTLLESAEVGTRVGLETRSLDANASFAYELLTSINK
Ga0268265_1153487623300028380Switchgrass RhizosphereLRAAFEIAGFFVGTTDETTSFFTARRLKNSAITLLESSAVGIRLGWDNRSLDANATFAYELLISINK
Ga0268264_1001147613300028381Switchgrass RhizosphereCAAFEMTEFFAGTTEETTSFFTCRRLKNSATALPESAEVGIRVGLETRSLDANASFAYELLTSINK
Ga0268264_1094252713300028381Switchgrass RhizosphereTCALLRAAFEIAEFFVGTTDETTSFFTARRLKNSAITLLESSAVGIRLGWDNRSLDANATFAYELLISINK
Ga0307295_1001782713300028708SoilSQSTCALFCAAFEIAEFFVGTTDETTTLFTWRRLKNSPTTVLESSEVGIRAGLETRSLDANAIFAYELLTSISK
Ga0307313_1017084323300028715SoilLLRAALEITAFFVGTTDETTSFFICRRLKNSATTPLESSEVGIRAELETRSLDANASFAYELLTSINK
Ga0307290_1017475623300028791SoilAFFVGTTDETTSFFTCRRLKNSATALRESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0307294_1003200413300028810SoilFQSSQSTCALLRAAFEIAEFFVGTTDETTTLFTWRRLKNSPTTVLESSEVGIRAGLETRSLDANAIFAYELLTSISK
Ga0307292_1002431833300028811SoilSIVTPSFSFQSNQSTCALLRAAFEIAAFFVGTTDETTSFFTCRRLKNSATTLRESSEVGIRAGLETRSLDANASFAYELLTSINK
Ga0307310_1018017713300028824SoilLSFQFSQSTCALLRAAFEIAEFFVGTTDETTSFFTARRLKNSAITLLESSEVRICLGWDNRSLDANATFAYELLISINK
Ga0307289_1039052423300028875SoilTPRLSFQFSQSTCALLRAAFEIAEFFVGTTDETTNFFTARRLKNSAITLLESSEVRIRLGWDNRSLDANATFAYELLISINK
Ga0075386_1217791613300030916SoilCAAFEIAEFFVGTTDETTSFFTWRRLKNSATTLLESSAVGTRVGLETRSLDANASFAYELLTSINK
Ga0170824_12280921713300031231Forest SoilSFQFSQSTCALLCAPFEIAAFFVGTTDETTSFFTCRRLKNSATTLLESSAVGMRAGLETRSLDANASFAYELLTSINK
Ga0170819_1249540023300031469Forest SoilFQSSQSTCALLSAAFEIAEFFFGTTDETTSFFTCRRLRNSATTLLESSEVGTRAGLQTRSLDAKASFAYELLTSITK
Ga0170818_10613542413300031474Forest SoilIAAFFVGTTDETTSFFTCRRLKNSATTLLESSAVRIRVGLETRSLDANANFACELLTSIN
Ga0310888_1023850323300031538SoilSQSTCAVLRAAFEIAEFFVGTTDETTSFLTCLRFKNSETTPLESSAVGIRVGLETRALDANAIFAYELLTSISK
Ga0307468_10147737213300031740Hardwood Forest SoilGTTDETTNFFTCRRFKNSATTLLESSEVGTRAGLETRSLDANASFAYELLTSITK
Ga0310885_1085120713300031943SoilMVIPSLSFQSSQSTFVLLRAAFEMVEFFAGTTDETMSFFTCRRLKNSAITLLESSAVGTRAGLETRSLDANASFAYELLTSINK
Ga0306922_1092246813300032001SoilSIATPSLSFQSSQSTGALLCAAFEIAELFAGTTDETTSFFTCLRLKNSVIALVESSAVGIRAGMETRCLDANASFAYELLISINK
Ga0310906_1125895713300032013SoilTTDETTSFFTCRRPKNSATTPLESFAVEICAGLETRCFDANAIFAYELLTSINK
Ga0306920_10311094413300032261SoilFFVGTTDETTSLFTCRRLKNSATTTLESSAVGIRAGLETRSVEANATFAKALLISINK
Ga0310812_1030544723300032421SoilSLSFESNQSTCVLLRAAFEIAEFLVGTTEETTTFFTCRRLKNSETTLLESAEVGMRVGLDTRSLDANASFAYELLTSINK
Ga0247830_1074071013300033551SoilVTPSLSFQFSQSTCALLRAAFEIAEFFVGTTDETMTLFTCRRLNNSSTTLLETSEVEIRAGLKTRSFDANASFAYELLTSINK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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