Metagenome / Metatranscriptome Family F067684

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F067684
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	65 residues
Representative Sequence	KTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDEQLRAWMDEDEAAMRRFRAGA
Number of Associated Samples	110
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.40 %
% of genes near scaffold ends (potentially truncated)	23.20 %
% of genes from short scaffolds (< 2000 bps)	73.60 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.200 % of family members)
Environment Ontology (ENVO)	Unclassified (30.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (27.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.61% β-sheet: 0.00% Coil/Unstructured: 48.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13470	PIN_3	11.20
PF16277	DUF4926	2.40
PF13360	PQQ_2	2.40
PF01850	PIN	2.40
PF02384	N6_Mtase	1.60
PF00266	Aminotran_5	1.60
PF01479	S4	1.60
PF02518	HATPase_c	1.60
PF12850	Metallophos_2	1.60
PF07927	HicA_toxin	1.60
PF01420	Methylase_S	0.80
PF09826	Beta_propel	0.80
PF00795	CN_hydrolase	0.80
PF05683	Fumerase_C	0.80
PF01761	DHQ_synthase	0.80
PF09084	NMT1	0.80
PF00118	Cpn60_TCP1	0.80
PF08463	EcoEI_R_C	0.80
PF13749	HATPase_c_4	0.80
PF08547	CIA30	0.80
PF02457	DAC	0.80
PF00595	PDZ	0.80
PF12770	CHAT	0.80
PF13372	Alginate_exp	0.80
PF01467	CTP_transf_like	0.80
PF16360	GTP-bdg_M	0.80
PF08448	PAS_4	0.80
PF03965	Penicillinase_R	0.80
PF16313	DUF4953	0.80
PF13304	AAA_21	0.80
PF09720	Unstab_antitox	0.80
PF13560	HTH_31	0.80
PF04679	DNA_ligase_A_C	0.80
PF12762	DDE_Tnp_IS1595	0.80
PF12161	HsdM_N	0.80
PF08240	ADH_N	0.80
PF04313	HSDR_N	0.80
PF07394	DUF1501	0.80
PF03073	TspO_MBR	0.80
PF08245	Mur_ligase_M	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.60
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.80
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.80
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.80
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.80
COG3476	Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)	Signal transduction mechanisms [T]	0.80
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.80
COG4096	Type I site-specific restriction endonuclease, part of a restriction-modification system	Defense mechanisms [V]	0.80
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.80 %
Unclassified	root	N/A	3.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.80 %
Unclassified	root	N/A	3.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.80 %
Unclassified	root	N/A	3.20 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	51.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.00 %
Unclassified	root	N/A	3.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36.00 %
Unclassified	root	N/A	3.20 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	29.60 %
Unclassified	root	N/A	3.20 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.60 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.60 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	29.60 %
Unclassified	root	N/A	3.20 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.60 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.80 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.80 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	0.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	29.60 %
Unclassified	root	N/A	3.20 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.60 %
Spartobacteria bacterium AMD-G4	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium AMD-G4	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.80 %
unclassified Pirellulales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	29.60 %
Unclassified	root	N/A	3.20 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.80 %
Lysobacter ruishenii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter ruishenii	0.80 %
Pirellulales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	0.80 %
Spartobacteria bacterium AMD-G4	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium AMD-G4	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	29.60 %
Unclassified	root	N/A	3.20 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.80 %
Lysobacter ruishenii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter ruishenii	0.80 %
Pirellulales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	0.80 %
Spartobacteria bacterium AMD-G4	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium AMD-G4	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002123\|C687J26634_10303008	All Organisms → cellular organisms → Bacteria → PVC group	536	Open in IMG/M
3300003852\|Ga0031655_10186441	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300003993\|Ga0055468_10043233	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300004009\|Ga0055437_10239849	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300004047\|Ga0055499_10082880	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300004779\|Ga0062380_10324813	All Organisms → cellular organisms → Bacteria → PVC group	655	Open in IMG/M
3300004782\|Ga0062382_10156662	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300005166\|Ga0066674_10313322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300005172\|Ga0066683_10836346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005180\|Ga0066685_10090420	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300005294\|Ga0065705_10033465	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300005294\|Ga0065705_10547238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300005295\|Ga0065707_10441754	Not Available	809	Open in IMG/M
3300005451\|Ga0066681_10495364	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005456\|Ga0070678_102020464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005526\|Ga0073909_10027442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1916	Open in IMG/M
3300005598\|Ga0066706_10484262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	986	Open in IMG/M
3300005836\|Ga0074470_11425318	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300006031\|Ga0066651_10361124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300006031\|Ga0066651_10794395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300006638\|Ga0075522_10004017	All Organisms → cellular organisms → Bacteria	10608	Open in IMG/M
3300006796\|Ga0066665_10315194	All Organisms → cellular organisms → Bacteria → PVC group	1263	Open in IMG/M
3300006845\|Ga0075421_100653092	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300006876\|Ga0079217_10648537	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300009012\|Ga0066710_100448595	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300009012\|Ga0066710_101192824	All Organisms → cellular organisms → Bacteria → PVC group	1179	Open in IMG/M
3300009012\|Ga0066710_104528782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300009038\|Ga0099829_10657659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	871	Open in IMG/M
3300009078\|Ga0105106_10972808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300009088\|Ga0099830_10791223	Not Available	782	Open in IMG/M
3300009091\|Ga0102851_11227481	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300009175\|Ga0073936_10002769	All Organisms → cellular organisms → Bacteria	25820	Open in IMG/M
3300009527\|Ga0114942_1034205	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300009630\|Ga0116114_1089500	All Organisms → cellular organisms → Bacteria → PVC group	827	Open in IMG/M
3300010325\|Ga0134064_10439566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300011406\|Ga0137454_1056572	All Organisms → cellular organisms → Bacteria → PVC group	637	Open in IMG/M
3300011419\|Ga0137446_1125835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300012096\|Ga0137389_10333447	All Organisms → cellular organisms → Bacteria → PVC group	1288	Open in IMG/M
3300012189\|Ga0137388_11151179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300012198\|Ga0137364_11222574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300012201\|Ga0137365_10026236	All Organisms → cellular organisms → Bacteria	4497	Open in IMG/M
3300012204\|Ga0137374_10292603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1341	Open in IMG/M
3300012206\|Ga0137380_10001222	All Organisms → cellular organisms → Bacteria	20756	Open in IMG/M
3300012208\|Ga0137376_11627851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300012210\|Ga0137378_10287036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1531	Open in IMG/M
3300012210\|Ga0137378_10450016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1193	Open in IMG/M
3300012211\|Ga0137377_11714793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012285\|Ga0137370_10060918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2047	Open in IMG/M
3300012353\|Ga0137367_10001755	All Organisms → cellular organisms → Bacteria	17251	Open in IMG/M
3300012355\|Ga0137369_11045533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300012360\|Ga0137375_10763903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300012362\|Ga0137361_11120402	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300012532\|Ga0137373_11117239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300012923\|Ga0137359_10389289	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300013092\|Ga0163199_1001862	All Organisms → cellular organisms → Bacteria	13026	Open in IMG/M
3300014151\|Ga0181539_1125772	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300014168\|Ga0181534_10005091	All Organisms → cellular organisms → Bacteria	7477	Open in IMG/M
3300014259\|Ga0075311_1087662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300014491\|Ga0182014_10006038	All Organisms → cellular organisms → Bacteria	13235	Open in IMG/M
3300014491\|Ga0182014_10055629	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300014496\|Ga0182011_10791861	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300014839\|Ga0182027_10129180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3002	Open in IMG/M
3300014839\|Ga0182027_10534830	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300016270\|Ga0182036_11479492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300016750\|Ga0181505_11084239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	747	Open in IMG/M
3300017941\|Ga0187850_10132658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1180	Open in IMG/M
3300017998\|Ga0187870_1080017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300018005\|Ga0187878_1105664	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300018012\|Ga0187810_10153078	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300018020\|Ga0187861_10162284	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → unclassified Pirellulales → Pirellulales bacterium	1023	Open in IMG/M
3300018021\|Ga0187882_1281940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300018033\|Ga0187867_10518069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M
3300018040\|Ga0187862_10064670	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300018433\|Ga0066667_10809210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300018469\|Ga0190270_13085353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300018482\|Ga0066669_10215477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1485	Open in IMG/M
3300019889\|Ga0193743_1035941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2308	Open in IMG/M
3300020197\|Ga0194128_10083090	Not Available	2072	Open in IMG/M
3300021081\|Ga0210379_10497745	All Organisms → cellular organisms → Bacteria → PVC group	542	Open in IMG/M
3300022524\|Ga0224534_1015638	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300022526\|Ga0224533_1003447	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300022555\|Ga0212088_10001452	All Organisms → cellular organisms → Bacteria	52423	Open in IMG/M
3300025164\|Ga0209521_10418485	All Organisms → cellular organisms → Bacteria → PVC group	725	Open in IMG/M
3300025324\|Ga0209640_10194556	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300025569\|Ga0210073_1035999	Not Available	1013	Open in IMG/M
3300025862\|Ga0209483_1001872	All Organisms → cellular organisms → Bacteria	15398	Open in IMG/M
3300026319\|Ga0209647_1104520	All Organisms → cellular organisms → Bacteria → PVC group	1342	Open in IMG/M
3300027831\|Ga0209797_10334297	All Organisms → cellular organisms → Bacteria → PVC group	625	Open in IMG/M
3300027896\|Ga0209777_10011861	All Organisms → cellular organisms → Bacteria	9121	Open in IMG/M
3300027909\|Ga0209382_11070670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300029999\|Ga0311339_10761298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300031234\|Ga0302325_12794348	All Organisms → cellular organisms → Bacteria → PVC group	572	Open in IMG/M
3300031548\|Ga0307408_100105100	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300031772\|Ga0315288_10021530	All Organisms → cellular organisms → Bacteria	7993	Open in IMG/M
3300031834\|Ga0315290_10075344	All Organisms → cellular organisms → Bacteria → PVC group	2798	Open in IMG/M
3300031911\|Ga0307412_11310671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300031912\|Ga0306921_10362363	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300031997\|Ga0315278_10401344	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300031997\|Ga0315278_11246104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300031999\|Ga0315274_10023199	All Organisms → cellular organisms → Bacteria	8675	Open in IMG/M
3300031999\|Ga0315274_10461710	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300032144\|Ga0315910_10094265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2194	Open in IMG/M
3300032157\|Ga0315912_10519490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium AMD-G4	947	Open in IMG/M
3300032157\|Ga0315912_10871186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter ruishenii	716	Open in IMG/M
3300032163\|Ga0315281_11546485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300032164\|Ga0315283_10084891	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300032164\|Ga0315283_11284533	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300032177\|Ga0315276_11288503	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032177\|Ga0315276_11479224	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300032177\|Ga0315276_11837930	All Organisms → cellular organisms → Bacteria → PVC group	622	Open in IMG/M
3300032342\|Ga0315286_10033402	All Organisms → cellular organisms → Bacteria	5371	Open in IMG/M
3300032342\|Ga0315286_10650849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1081	Open in IMG/M
3300032401\|Ga0315275_10032060	All Organisms → cellular organisms → Bacteria	5518	Open in IMG/M
3300032516\|Ga0315273_10251064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2410	Open in IMG/M
3300032805\|Ga0335078_10039472	All Organisms → cellular organisms → Bacteria	7000	Open in IMG/M
3300032805\|Ga0335078_12359070	All Organisms → cellular organisms → Bacteria → PVC group	555	Open in IMG/M
3300032828\|Ga0335080_11664879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300032893\|Ga0335069_10001643	All Organisms → cellular organisms → Bacteria	35811	Open in IMG/M
3300033414\|Ga0316619_10313299	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300033416\|Ga0316622_101831990	All Organisms → cellular organisms → Bacteria → PVC group	706	Open in IMG/M
3300033433\|Ga0326726_10087526	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300033487\|Ga0316630_11134755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300033513\|Ga0316628_102493634	All Organisms → cellular organisms → Bacteria → PVC group	683	Open in IMG/M
3300034129\|Ga0370493_0165775	All Organisms → cellular organisms → Bacteria → PVC group	729	Open in IMG/M
3300034149\|Ga0364929_0062125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.00%
Host-Associated	Host-Associated	4.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.60%
Aquatic	Environmental → Aquatic	38.40%
Plants	Host-Associated → Plants	4.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.80%
Freshwater	Environmental → Aquatic → Freshwater	32.80%
Peat	Environmental → Terrestrial → Peat	4.00%
Marine	Environmental → Aquatic → Marine	3.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.20%
Sediment	Environmental → Aquatic → Sediment	2.40%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.20%
Lake	Environmental → Aquatic → Freshwater → Lake	16.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.60%
Loam	Environmental → Terrestrial → Soil → Loam	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.60%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.20%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.40%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.60%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.60%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.60%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022526	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 10-14	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26634_103030082	3300002123	Soil	NGTMKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA*
Ga0031655_101864412	3300003852	Freshwater Lake Sediment	MTLTEIEREAESLPAAKKTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMEEDEEAMRRFRAGA*
Ga0055468_100432331	3300003993	Natural And Restored Wetlands	LTEIERAVKALPAAEKTELLLFVARCLREEQAPLPEPRDFIDEQLRAWMDEDEEAMRRFRSGA*
Ga0055437_102398492	3300004009	Natural And Restored Wetlands	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRTGA*
Ga0055499_100828801	3300004047	Natural And Restored Wetlands	MKTLAEIERAVEELPLGEKTELLLFVAQRLRDEQAPLPEPRDFSDEQLRAWMDEDE
Ga0062380_103248132	3300004779	Wetland Sediment	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSEEQLRAWMDEDEEAMRRFRSGA*
Ga0062382_101566623	3300004782	Wetland Sediment	MKTLAEIERAVEELPSGQKTELLLFVAQRLRDEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA*
Ga0066674_103133221	3300005166	Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQAPLPQPRLFSDEQLQAWMDEDEEAMRRFRAGA*
Ga0066683_108363461	3300005172	Soil	MKTLNEIERAAEELPPEEKTELLLFLARSLRKDKAPLPEPRMFSREELQAWMDEDEA
Ga0066685_100904203	3300005180	Soil	MTAMKTLDEIERAIEELPPAEKTELLLFVAKSLRGEQAPLPAPRLFSDEQLKAWMDEDEEAMRRFRSGA*
Ga0065705_100334651	3300005294	Switchgrass Rhizosphere	MKTLXEIERAVEELPSGEKPELLLLLAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA*
Ga0065705_105472382	3300005294	Switchgrass Rhizosphere	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWLDEDEEAMRRFRSGA*
Ga0065707_104417543	3300005295	Switchgrass Rhizosphere	MKTLPEIERAVEELPSGEKPELLLFLAQRLREEQAPLPTPRDFSDEQLRTWMDEDE
Ga0066681_104953641	3300005451	Soil	AEIERAAEELPPAERTELLLFVARSLRQEQAPLPEPRLFSDEQLQAWMDEDEEAMRRFRAGA*
Ga0070678_1020204641	3300005456	Miscanthus Rhizosphere	MEPSGRLARMKTLVEIERAAEELPSGQRTELLLFLAETLRKEQAPLPEPRQFSAEQLQAWMDEDEEAMRRFRGGE*
Ga0073909_100274422	3300005526	Surface Soil	MKTLAEIERAVEELPPAQKTELLLFVAQCLRGQQAPLPEPRLFSDEQLRAWMDEDEKAMRRFQAGE*
Ga0066706_104842622	3300005598	Soil	MKTLNEIERAAEELPPGEKTELLLFLARSLRKDKAPLPEPRMFSREELQAWMDEDEAAMREFRSQT*
Ga0074470_114253182	3300005836	Sediment (Intertidal)	MKTLAEIERAVEELPSGEKTELLLFVAQRLRDEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA*
Ga0066651_103611242	3300006031	Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQAPLPEPRLFSDEQLQAWMDEDEEAMRRFRAGA*
Ga0066651_107943952	3300006031	Soil	MKTLAEIERAAEELPIGQRTELLLFLAESLRKEQAPLPEPRLFSEEQLKTWMDEDEEAMRRFKAGA*
Ga0075522_1000401718	3300006638	Arctic Peat Soil	MNTLVEIEQAVGGLPSAQKTELLLFVAQSLREEQAPLPEPRLFSDEQLRTWMDEDEEAMRRFRAGA*
Ga0066665_103151941	3300006796	Soil	MKRLVEIERAAEELPSGQRAELLLFLAETLRKERAPLPEPRQFTAEQLKAWMDEDEEAMRRFRAGE*
Ga0075421_1006530922	3300006845	Populus Rhizosphere	MKTLAEIERAVEALPSGEKTELLLFLAQRLREEQAPLPEPRDFTDEQLRGWMDEDEEAMRRFRSGA*
Ga0079217_106485371	3300006876	Agricultural Soil	MKTLAEIERAAEELPASQRTELLLFLAESLRKEQAPLPEPRTFSEAQIQAWMDEDEEAMRRFKAG
Ga0066710_1004485954	3300009012	Grasslands Soil	MKRLVEIERAAEELPSGQRAELLLFLAETLRKERAPLPEPRQFSTEQLQAWMDEDEEAMRRFRAGE
Ga0066710_1011928241	3300009012	Grasslands Soil	MKTLNEIERAAEELPPGEKTELLLFLARSLRKDKAPLPEPRMFSREELQAWMDEDEAAMREFRSQT
Ga0066710_1045287821	3300009012	Grasslands Soil	MKTLDEIERAAEDLPPAQKAELLLFLAENLRKEQAPLPEPRLFSDEQLRSWLDEDEEAMRRFRAGA
Ga0099829_106576592	3300009038	Vadose Zone Soil	VPAAIANDAGQCETGAMKTLVEIERAAEELPSAQRTELLLFLAETLRKEQAPLPEPRQFSTEQLQTWMDEDEKAMRSFRAGE*
Ga0105106_109728081	3300009078	Freshwater Sediment	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRLFSDEQLQAWMDEDEEAMRRFRSGA*
Ga0099830_107912232	3300009088	Vadose Zone Soil	MKTLVEIERAAEELPSAQRTELLLFLAETLRKEQAPLPEPRQFSTEQLQTWMDEDEKAMRSFRAGE*
Ga0102851_112274811	3300009091	Freshwater Wetlands	MKTLVEIERAVEELPSSQKTELLLFVAQSLREQQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRAGA*
Ga0073936_100027698	3300009175	Freshwater Lake Hypolimnion	MTLTEIEREAESLPAAKKTELLLFLAENPRKERAPLPEPRLVSEEQLRAWMDEDEDAMRRFRAGA*
Ga0114942_10342053	3300009527	Groundwater	MNTLIEIERAVGGLPSAQKTELLLFVAQSLREEQAPLPEPRFFPDEQLRAWMDEDEEAMRRFRVGA*
Ga0116114_10895002	3300009630	Peatland	MKTLVEIERAVEELPPTEKTELLLFVAQSLREEQSPLPGPRLFSDEQLRAWMDEDEAAMRRFRTGV*
Ga0134064_104395662	3300010325	Grasslands Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQAPLPQPRLFSDEQLQVWMDEDEEAMRRFRTGA*
Ga0137454_10565721	3300011406	Soil	MKTLAEIERAVEELPSSEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRTGA*
Ga0137446_11258352	3300011419	Soil	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA*
Ga0137389_103334472	3300012096	Vadose Zone Soil	MKTLVEIERAAEELPSAQRTELLLFLAETLRKEQAQLPEPRQFSTEQLQTWMDEDEEAMRRFRAGE*
Ga0137388_111511792	3300012189	Vadose Zone Soil	MKTLVEIERAAEELPPGQRAELLLFLAETLRKEQAQLPEPRQFSTEQLQTWMDEDEEAMRRFRAGE*
Ga0137364_112225741	3300012198	Vadose Zone Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQTPLPQPRLFSDEQLQAWMDEDEEAMRRFRAGA*
Ga0137365_100262361	3300012201	Vadose Zone Soil	MKSLVEIERAAEELPSGQRAELLLFLAETLRKEQAPLPEPRQFSAEQLQTWMDEDEEAMRRFRA
Ga0137374_102926032	3300012204	Vadose Zone Soil	MKTLAEIERAAGELPPGERTELLLFVARSLRQEQAPLPEPRLFSDEQLKAWMDEDEDAMRRFRAGA*
Ga0137380_100012224	3300012206	Vadose Zone Soil	MKSLVEIERAAEELPSGQRAELLLFLAETLRKEQAPLPEPRQFSAEQLQTWMDEDEEAMRRFRAGE*
Ga0137376_116278512	3300012208	Vadose Zone Soil	MKRLVEIERAAEELPSGQRAELLLFLAETLRKEGAPLPEPRQFTAEQLKAWMDEDEEAMRRFRAGE*
Ga0137378_102870361	3300012210	Vadose Zone Soil	MKTLAEIESAVEELPPAQRTELLLFVAQSLREVQAPLPEPRDFSDEQLRTWMDEDEAAMRRFQAGA*
Ga0137378_104500163	3300012210	Vadose Zone Soil	VEELPAAQKTELLLFVAKSLREEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRAGA*
Ga0137377_117147932	3300012211	Vadose Zone Soil	MKTLVEIERAVEELPAAQKTELLLFVARSLREEQAPLPAPRLFSDEQLRAWMDEDEEAMRRSRAGA*
Ga0137370_100609182	3300012285	Vadose Zone Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQAPLPQPRLFSDEQLQAWMDEDEEAMRRFRADA*
Ga0137367_100017559	3300012353	Vadose Zone Soil	MKTLAEIERAAGELPPGERTELLLFVARSLRQEQAPLPEPRLFSDEQLEAWMDEDEDAMRRFRAGA*
Ga0137369_110455332	3300012355	Vadose Zone Soil	RAGWHDDAMKTLAEIERAAGELPPGERTELLLFVARSLRQEQAPLPEPRLFSDEQLKAWMDEDEDAIRRFRAGA*
Ga0137375_107639032	3300012360	Vadose Zone Soil	MALLCHKEAMKTLVEIERAVCELPAAQKTELLLFTAQSLREEQAPLPEPRLFSDEQLRAWMDEDEAAMRRFRAGA*
Ga0137361_111204021	3300012362	Vadose Zone Soil	MKTLAEIERAVEELPSAQKTELLLFVAENLREEQAPLPEPRLFSDEQLRAWMDEDEEAMR
Ga0137373_111172392	3300012532	Vadose Zone Soil	MKTLVEIERAAKELPSGQRTALLLVLAESLRKEQAPLPEPREFSAEQLQGWMDEDEEAMRRFRAGG*
Ga0137359_103892892	3300012923	Vadose Zone Soil	MKRLVEIERAAGELPSGQRAELLLFLAETLRKERAPLPEPRQFTAEQLKAWMDEDEEAMRRFQAGE*
Ga0163199_10018624	3300013092	Freshwater	MKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRAGA*
Ga0181539_11257721	3300014151	Bog	MKSLTEIEQAVGELPPGQKTELLLFVAQSLRAEQAPLPEARDFSEGQIRAWLDEDEE
Ga0181534_100050918	3300014168	Bog	LDLWQNETMNTLVEIEQAVGGLPSAQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEEAMRRFRAGA*
Ga0075311_10876621	3300014259	Natural And Restored Wetlands	KALPAAEKTELLLFVARCLREEQAPLPEPRDFIDEQLRAWMDEDEEAMRRFRSGA*
Ga0182014_1000603811	3300014491	Bog	MTLTEIEREAESLPAAKRSELLLFLAESLRNEQAPLPEPRLFSDEHLRAWMDEDEKAMRRFRVGA*
Ga0182014_100556292	3300014491	Bog	MTLTEIEREAECLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRAGA*
Ga0182011_107918612	3300014496	Fen	MTLTEIEREAESLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAKRRFRAGA*
Ga0182027_101291802	3300014839	Fen	MKSLTEIEQAVEELPAGQKTELLLFVARSLRAEQAPLPEARDFSDEQIRSWLDQDEEAMRRFEKGART*
Ga0182027_105348302	3300014839	Fen	MKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDEQLRGWMDEDEAAMRHFRAGE*
Ga0182036_114794923	3300016270	Soil	LLKIERAAEELPTADRAELLFLARSLREQQAPLPEPRLFSDKQLKAWLDEDEEAMRRFRAKA
Ga0181505_110842392	3300016750	Peatland	MKSLTEIEQAVGELPPGQKTELLLFVAQSLRAEQAPLPEARDFSEGQIRAWLDEDEEAMRRFQKGA
Ga0187850_101326581	3300017941	Peatland	MTLTEIEREAESLPAAKTTELLLFLAENLRKEQAPLPEPRLCSEEQLRAWMDEDEEAMRRFRAGA
Ga0187870_10800172	3300017998	Peatland	MTLTEIEREAESLPAAKKTELLLFLAENLRKEQAPLPEPRLCSEEQLRAWMDEDEEAMRRFRAGA
Ga0187878_11056642	3300018005	Peatland	MTLTEIEREAESLPAAKKTELLLFLAENLRKEQAPLPEPRLCSEEQLRAWMDEDAEAMRRFRAGA
Ga0187810_101530783	3300018012	Freshwater Sediment	AMKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSEEQLRAWMDEDEAAMRRFRAVE
Ga0187861_101622841	3300018020	Peatland	MTLTEIEREAESLPAAKKTELLLFLAENLRKEQAPLPEPRLCSEEQLRAWMDEDAEAMRRFRAG
Ga0187882_12819402	3300018021	Peatland	MTLTEIEREAESLPAAKKTELLLFLAENLRKEQAPLPEPRLFSEEQLRAWMDEDEEAMRRFRA
Ga0187867_105180692	3300018033	Peatland	EQAVGELPPGQKTELLLFVAQSLRAEQAPLPEARDFSEGQIRAWLDEDEEAMRRFQKGA
Ga0187862_100646703	3300018040	Peatland	MKTLVEIERAVEELPPTEKTELLLFVAQSLREEQSPLPGPRLFSDEQLRAWMDEDEAAMRRFRTGV
Ga0066667_108092102	3300018433	Grasslands Soil	MKTLAEIERAAEELPPAERTELLLFVARSLRQEQAPLPQPRLFSDEQLQAWMDEDEEAMRRFRAGA
Ga0190270_130853532	3300018469	Soil	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPDPRDFSDEQLRTWMDEDEEAMRRFRSGA
Ga0066669_102154773	3300018482	Grasslands Soil	MKTLAEIERAAEELPPAERTEFLLFVARSLRQEQAPLPQPRLFSDEQLQVWMDEDEEAMRRFR
Ga0193743_10359412	3300019889	Soil	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA
Ga0194128_100830901	3300020197	Freshwater Lake	MKTLAEIERAVEALPPAEKTELLLFVARCLREEQAPLPEPRDFNDEQLRSWMDEDEEAMRRFRSGR
Ga0210379_104977452	3300021081	Groundwater Sediment	TLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA
Ga0224534_10156385	3300022524	Soil	MTLTEIEREAECLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRAGA
Ga0224533_10034472	3300022526	Soil	MTLTEIEREAESLPAAKRSELLLFLAESLRNEQAPLPEPRLFSDEHLRAWMDEDEKAMRRFRVGA
Ga0212088_1000145213	3300022555	Freshwater Lake Hypolimnion	MTLTEIEREAESLPAAKKTELLLFLAENPRKERAPLPEPRLVSEEQLRAWMDEDEDAMRRFRAGA
Ga0209521_104184852	3300025164	Soil	RAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA
Ga0209640_101945564	3300025324	Soil	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEKAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA
Ga0210073_10359992	3300025569	Natural And Restored Wetlands	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRTGA
Ga0209483_100187220	3300025862	Arctic Peat Soil	MNTLVEIEQAVGGLPSAQKTELLLFVAQSLREEQAPLPEPRLFSDEQLRTWMDEDEEAMRRFRAGA
Ga0209647_11045203	3300026319	Grasslands Soil	MKTLVEIERAAEELPSRQRTELLLFVAETLRKEQATLPEPREFSAEQLQAWMDEDEDAMRRFRAGK
Ga0209797_103342972	3300027831	Wetland Sediment	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSEEQLRAWMDEDEEAMRRFRSGA
Ga0209777_100118615	3300027896	Freshwater Lake Sediment	MTLTEIEREAESLPAAKKTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMEEDEEAMRRFRAGA
Ga0209382_110706702	3300027909	Populus Rhizosphere	MKTLAEIERAVEALPSGEKTELLLFLAQRLREEQAPLPEPRDFTDEQLRGWMDEDEEAMRRFRSGA
Ga0311339_107612981	3300029999	Palsa	MVCGCQVGDQMAEYKRMKTLSEIEQAVEELPMGQKTELLLFVARSLREAQAPLPEPRLFSDAQLRAWLDEDEQAMRRFQTGA
Ga0302325_127943482	3300031234	Palsa	MKTLTEIEQAVEELPSGQKTELLLFVARSLRAAQAPLPEPRLFSDEQLGGWLDEDEQAMRRFQKDA
Ga0307408_1001051003	3300031548	Rhizosphere	MKTLAEIERAVEELPSGEKTELLLFVAQRLRDEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRAGA
Ga0315288_100215305	3300031772	Sediment	MAMKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRR
Ga0315290_100753443	3300031834	Sediment	MAQYPVMTLTEIEREAESLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRAGV
Ga0307412_113106712	3300031911	Rhizosphere	MKTLAEIERAVEELPSGEKTELLLFVAQRLRDEQAPLPEPRDFSDEQLRAWMDEDEEAMR
Ga0306921_103623635	3300031912	Soil	LLKIERAAEELPTADRAELLLFLARSLREQQAPLPEPRLFSDKQLKAWLDEDEEAMRRFRAKA
Ga0315278_104013442	3300031997	Sediment	MKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRTGA
Ga0315278_112461043	3300031997	Sediment	MAQYPVMTLTEIEREAESLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMR
Ga0315274_100231992	3300031999	Sediment	MKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRAGA
Ga0315274_104617103	3300031999	Sediment	MKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFQTGA
Ga0315910_100942651	3300032144	Soil	MTLTDLENAACELPTSKRTELLLLLAETLRKEQAPLPRPREFSKEQLNAWMDQDE
Ga0315912_105194903	3300032157	Soil	MTLTDLENAACELPTSKRTELLLLLAETLRKEQAPLPRPREFSKEQLNAWMDQDEEAMRRFEAGA
Ga0315912_108711862	3300032157	Soil	MKTLVEIERAVEELPSSQKTELLLFVAQSLRAEQAPLPEPRLFSDDQLRAWLDEDEAAMRRFQ
Ga0315281_115464852	3300032163	Sediment	MKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDKQLRAWMDEDEEAMRRFRTGA
Ga0315283_100848915	3300032164	Sediment	MAQYPVMTLTEIEREAESLPAAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRARV
Ga0315283_112845331	3300032164	Sediment	KTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDEQLRAWMDEDEAAMRRFRAGA
Ga0315276_112885031	3300032177	Sediment	VPVKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDE
Ga0315276_114792243	3300032177	Sediment	RAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRTGA
Ga0315276_118379302	3300032177	Sediment	TLVESERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRR
Ga0315286_100334026	3300032342	Sediment	MKTLVESERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMR
Ga0315286_106508493	3300032342	Sediment	VMTLTEIEREAESLPVAKRTELLLFLAESLRKEQAPLPEPRLFSDEQLRAWMDEDEEAMRRFRARA
Ga0315275_100320604	3300032401	Sediment	MKTLVEIERAVEELPPAQKTELLLFVAKSLRGQQAPLPEPPLFSDEQLRAWMDEDEAAMRRFRAGA
Ga0315273_102510642	3300032516	Sediment	MAMKTLVEIERAVEELPSSQKTELLLFVAQSLREEQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRTGA
Ga0335078_100394727	3300032805	Soil	MTLTEIEREAESLPAAKKTELLLFLAESLRKEQSPLPEPRLFSEEQLRAWMDEDEEAMRRFRAGA
Ga0335078_123590701	3300032805	Soil	IEREAESLPAAERAELLLFLAESLRKEQAPLPPPRLFSDEQLRAWMDEDEEAMRRFRAGA
Ga0335080_116648791	3300032828	Soil	MTLTEIEREAESLPAAKKTELLLFLAESLRKEQSPLPEPRLFSDEQLRAWMDEDEEAMRRFRAGA
Ga0335069_1000164316	3300032893	Soil	MTLTEIEREAESLPAAKRAELLLFLAESLRKEQAPLPPPRLFSDEQLRAWMDEDEEAMRRFRAGA
Ga0316619_103132992	3300033414	Soil	MKTLVEIERAVEELPSSQKTELLLFVAQSLREQQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRAGA
Ga0316622_1018319901	3300033416	Soil	ERAVEELPSSQKTELLLFVAQSLREQQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRAGA
Ga0326726_100875265	3300033433	Peat Soil	MSGEIAGARIRWQNDAMKTLAEIERAVEELPSGEKTELLLFVAQRLREEQAPLPEPRDFSDEQLRAWMDEDEEAMRRFRSGA
Ga0316630_111347552	3300033487	Soil	MKTLVEIERAVEELPSSQKTELLLFVAQSLREQQAPLPEPRLFSDDQLRAWMDEDEAAMRRFRTGA
Ga0316628_1024936342	3300033513	Soil	MTLTEIEKAAESLPAAKKTELLLFLAESLRKEQAPLPEPRLFSDEQLQAWMDEDERAMRRFQAGP
Ga0370493_0165775_440_679	3300034129	Untreated Peat Soil	VVETAVGLWQKESMNTLVEIEQAVGGLPSAQKTELLLFVAQSLREEQAPLPEPRLFPDEQLRAWMDEDEEAMRRFRAGA
Ga0364929_0062125_529_729	3300034149	Sediment	MKTLVEIERAVEELRSREKTELLLFVAQRLREEQAPLPEPRDFFEEQLRAWMDEDEEAMRRFRSGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067684

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences