NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067625

Metagenome / Metatranscriptome Family F067625

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067625
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 48 residues
Representative Sequence MDEVERTCPACGDAIEDGEALVFFDGEMYHVACAPGAQPWPPPPRQPRWD
Number of Associated Samples 106
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 70.40 %
% of genes near scaffold ends (potentially truncated) 32.80 %
% of genes from short scaffolds (< 2000 bps) 74.40 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.600 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(16.800 % of family members)
Environment Ontology (ENVO) Unclassified
(37.600 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 15.38%    Coil/Unstructured: 84.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF018125-FTHF_cyc-lig 22.40
PF03641Lysine_decarbox 13.60
PF00487FA_desaturase 8.00
PF00512HisKA 4.00
PF14791DNA_pol_B_thumb 3.20
PF07519Tannase 3.20
PF01678DAP_epimerase 2.40
PF05494MlaC 2.40
PF13185GAF_2 2.40
PF02469Fasciclin 1.60
PF12706Lactamase_B_2 1.60
PF05721PhyH 0.80
PF01435Peptidase_M48 0.80
PF11249DUF3047 0.80
PF01408GFO_IDH_MocA 0.80
PF01258zf-dskA_traR 0.80
PF02811PHP 0.80
PF01894UPF0047 0.80
PF13502AsmA_2 0.80
PF13492GAF_3 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG02125-formyltetrahydrofolate cyclo-ligaseCoenzyme transport and metabolism [H] 22.40
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 13.60
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 8.00
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 8.00
COG0253Diaminopimelate epimeraseAmino acid transport and metabolism [E] 2.40
COG2854Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter MlaCell wall/membrane/envelope biogenesis [M] 2.40
COG2335Uncaracterized surface protein containing fasciclin (FAS1) repeatsGeneral function prediction only [R] 1.60
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 0.80
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 0.80
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.60 %
UnclassifiedrootN/A22.40 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10048073All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300002561|JGI25384J37096_10008513All Organisms → cellular organisms → Bacteria3849Open in IMG/M
3300002562|JGI25382J37095_10000825All Organisms → cellular organisms → Bacteria → Proteobacteria8576Open in IMG/M
3300002908|JGI25382J43887_10479746All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300002912|JGI25386J43895_10012246All Organisms → cellular organisms → Bacteria2461Open in IMG/M
3300003267|soilL1_10027528All Organisms → cellular organisms → Bacteria7021Open in IMG/M
3300003996|Ga0055467_10019673All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300004156|Ga0062589_100547209All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300004480|Ga0062592_100620877All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300004643|Ga0062591_100203215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1457Open in IMG/M
3300005166|Ga0066674_10074210All Organisms → cellular organisms → Bacteria1560Open in IMG/M
3300005171|Ga0066677_10020437Not Available3054Open in IMG/M
3300005171|Ga0066677_10252379All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300005172|Ga0066683_10009906All Organisms → cellular organisms → Bacteria4957Open in IMG/M
3300005174|Ga0066680_10875157All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M
3300005175|Ga0066673_10074294All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300005175|Ga0066673_10080469All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1711Open in IMG/M
3300005176|Ga0066679_10354260All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium959Open in IMG/M
3300005178|Ga0066688_10021901All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3404Open in IMG/M
3300005184|Ga0066671_10158734Not Available1326Open in IMG/M
3300005186|Ga0066676_10253628All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300005445|Ga0070708_100229739All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300005446|Ga0066686_10006491All Organisms → cellular organisms → Bacteria5718Open in IMG/M
3300005451|Ga0066681_10554588All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005467|Ga0070706_101816435All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium554Open in IMG/M
3300005529|Ga0070741_10032964All Organisms → cellular organisms → Bacteria → Proteobacteria7102Open in IMG/M
3300005536|Ga0070697_100683916Not Available905Open in IMG/M
3300005546|Ga0070696_100755295All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300005557|Ga0066704_10038872All Organisms → cellular organisms → Bacteria2952Open in IMG/M
3300005568|Ga0066703_10692900All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium587Open in IMG/M
3300005586|Ga0066691_10218092All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1115Open in IMG/M
3300005713|Ga0066905_100604600All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300006049|Ga0075417_10005214All Organisms → cellular organisms → Bacteria4399Open in IMG/M
3300006755|Ga0079222_10123140All Organisms → cellular organisms → Bacteria1417Open in IMG/M
3300006755|Ga0079222_10618928All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300006755|Ga0079222_12327600All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300006794|Ga0066658_10157832Not Available1158Open in IMG/M
3300006804|Ga0079221_10204467Not Available1085Open in IMG/M
3300006844|Ga0075428_100082621All Organisms → cellular organisms → Bacteria3505Open in IMG/M
3300006845|Ga0075421_100042231All Organisms → cellular organisms → Bacteria → Proteobacteria5780Open in IMG/M
3300006845|Ga0075421_100368478All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1732Open in IMG/M
3300006852|Ga0075433_11469101All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300006876|Ga0079217_10175842All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1067Open in IMG/M
3300006894|Ga0079215_10224387Not Available973Open in IMG/M
3300006914|Ga0075436_101096359Not Available599Open in IMG/M
3300006954|Ga0079219_10203734Not Available1125Open in IMG/M
3300006954|Ga0079219_11192722Not Available658Open in IMG/M
3300007255|Ga0099791_10069133All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300007265|Ga0099794_10050084All Organisms → cellular organisms → Bacteria2009Open in IMG/M
3300007265|Ga0099794_10484442All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium650Open in IMG/M
3300009100|Ga0075418_10001372All Organisms → cellular organisms → Bacteria27473Open in IMG/M
3300009100|Ga0075418_10005398All Organisms → cellular organisms → Bacteria14475Open in IMG/M
3300009147|Ga0114129_10695068All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300009156|Ga0111538_12926723Not Available597Open in IMG/M
3300010102|Ga0127453_1033976All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium508Open in IMG/M
3300010303|Ga0134082_10244833All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300010320|Ga0134109_10350818Not Available580Open in IMG/M
3300010325|Ga0134064_10079577All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300010326|Ga0134065_10334267All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium590Open in IMG/M
3300010335|Ga0134063_10014720All Organisms → cellular organisms → Bacteria3138Open in IMG/M
3300011269|Ga0137392_10878181All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300011271|Ga0137393_10283673All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300012203|Ga0137399_10229404All Organisms → cellular organisms → Bacteria1517Open in IMG/M
3300012203|Ga0137399_10449144All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1078Open in IMG/M
3300012205|Ga0137362_10152468Not Available1977Open in IMG/M
3300012397|Ga0134056_1122223All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300012401|Ga0134055_1366937All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium544Open in IMG/M
3300012685|Ga0137397_10061684All Organisms → cellular organisms → Bacteria2705Open in IMG/M
3300012918|Ga0137396_10381193All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1045Open in IMG/M
3300012922|Ga0137394_10195160All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300012929|Ga0137404_10116700Not Available2176Open in IMG/M
3300012929|Ga0137404_11161292All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300012930|Ga0137407_10000829All Organisms → cellular organisms → Bacteria20313Open in IMG/M
3300014157|Ga0134078_10076073All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300014166|Ga0134079_10695655Not Available518Open in IMG/M
3300014263|Ga0075324_1022579All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300014302|Ga0075310_1053190All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium792Open in IMG/M
3300015241|Ga0137418_10015458All Organisms → cellular organisms → Bacteria7049Open in IMG/M
3300015259|Ga0180085_1030534All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300015371|Ga0132258_10197138All Organisms → cellular organisms → Bacteria4882Open in IMG/M
3300018431|Ga0066655_10000903All Organisms → cellular organisms → Bacteria10312Open in IMG/M
3300018431|Ga0066655_10192126Not Available1254Open in IMG/M
3300018433|Ga0066667_10001774All Organisms → cellular organisms → Bacteria8281Open in IMG/M
3300018433|Ga0066667_10065401All Organisms → cellular organisms → Bacteria2272Open in IMG/M
3300018468|Ga0066662_10004449All Organisms → cellular organisms → Bacteria6808Open in IMG/M
3300018482|Ga0066669_10553467Not Available1003Open in IMG/M
3300018482|Ga0066669_12444785Not Available502Open in IMG/M
3300020170|Ga0179594_10066638All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300020170|Ga0179594_10214147All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium723Open in IMG/M
3300025559|Ga0210087_1031972All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300026297|Ga0209237_1024812All Organisms → cellular organisms → Bacteria3358Open in IMG/M
3300026297|Ga0209237_1051414All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2069Open in IMG/M
3300026300|Ga0209027_1109552Not Available978Open in IMG/M
3300026312|Ga0209153_1037493Not Available1681Open in IMG/M
3300026313|Ga0209761_1220787All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300026327|Ga0209266_1050848All Organisms → cellular organisms → Bacteria2041Open in IMG/M
3300026330|Ga0209473_1225474All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium679Open in IMG/M
3300026540|Ga0209376_1314330All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300026542|Ga0209805_1132486Not Available1167Open in IMG/M
3300026547|Ga0209156_10283720All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300026548|Ga0209161_10207467Not Available1075Open in IMG/M
3300027637|Ga0209818_1059572All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300027637|Ga0209818_1292802Not Available502Open in IMG/M
3300027671|Ga0209588_1161485All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300027678|Ga0209011_1177799All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium589Open in IMG/M
3300027682|Ga0209971_1062233All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium904Open in IMG/M
3300027691|Ga0209485_1297692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria533Open in IMG/M
3300027717|Ga0209998_10209476All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300027748|Ga0209689_1347363Not Available568Open in IMG/M
3300027886|Ga0209486_10054275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2015Open in IMG/M
3300027909|Ga0209382_10226998All Organisms → cellular organisms → Bacteria2129Open in IMG/M
3300027909|Ga0209382_10887474Not Available940Open in IMG/M
3300028536|Ga0137415_10235741All Organisms → cellular organisms → Bacteria1641Open in IMG/M
3300031548|Ga0307408_100017595All Organisms → cellular organisms → Bacteria → Proteobacteria4785Open in IMG/M
3300031548|Ga0307408_100132622All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1945Open in IMG/M
3300031548|Ga0307408_101753549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria593Open in IMG/M
3300031716|Ga0310813_10627964Not Available953Open in IMG/M
3300031720|Ga0307469_11730868All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium603Open in IMG/M
3300031820|Ga0307473_10382379Not Available916Open in IMG/M
3300031852|Ga0307410_11416549All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria610Open in IMG/M
3300031901|Ga0307406_11642097Not Available568Open in IMG/M
3300031911|Ga0307412_10665456All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria890Open in IMG/M
3300032005|Ga0307411_10260652All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300033550|Ga0247829_11518743Not Available553Open in IMG/M
3300033815|Ga0364946_044700All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria909Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil12.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil9.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.40%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.60%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.60%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.80%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.80%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.80%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010102Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014263Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1EnvironmentalOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025559Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1004807323300002558Grasslands SoilMDERERTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD*
JGI25384J37096_1000851333300002561Grasslands SoilMDEQERTCPACGGVIEDGETLVFFDGEMYHVACAPGATSWPPPLRQPRWD*
JGI25382J37095_1000082533300002562Grasslands SoilMDEQERTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD*
JGI25382J43887_1047974623300002908Grasslands SoilMDEPERTCPACGGTIESDDAVVFFDGEMYHVACAPGAESLPREPRY*
JGI25386J43895_1001224623300002912Grasslands SoilMDEQERTCPACGGVIEDGETLVFFDGEMYHVACAPGATSWPPLRQPRWD*
soilL1_10027528123300003267Sugarcane Root And Bulk SoilMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGALPWPPPPREPRF*
Ga0055467_1001967323300003996Natural And Restored WetlandsMDVTERRCPACGERIEDGETVVFFGGEMYHLECAPGARLWPPRPREPRF*
Ga0062589_10054720923300004156SoilMDGVERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF*
Ga0062592_10062087733300004480SoilMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVPWPPPPREPRF*
Ga0062591_10020321523300004643SoilMDGPERTCPTCGDRIEDGETVVFFGGEMFHLDCAPGAIPWPPPPREPRF*
Ga0066674_1007421033300005166SoilMDDVERTCPACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0066677_1002043743300005171SoilMDDVERTCPACGSGIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0066677_1025237923300005171SoilMEEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0066683_1000990643300005172SoilMDDVELTCPACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0066680_1087515723300005174SoilMDEVERTCPACGGALEDNDPSVFFGGEMYHVGCAPGAPSWPPPPRQPRRD*
Ga0066673_1007429443300005175SoilGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0066673_1008046933300005175SoilMEEERTCPACGEAIEDGEALVFFDGEMYHVKCAPGASPWPPPPRQPRWD*
Ga0066679_1035426023300005176SoilMEEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0066688_1002190123300005178SoilMDDVERTCPACGSAIEDDDASVFFDGEMYHVACAPGATSWPPPPRQPRWD*
Ga0066671_1015873423300005184SoilMDDGERTCPSCGGAIEDDDASVFFDGEMYHVACAPGAQPWPPPPRQPRWD*
Ga0066676_1025362813300005186SoilMDDVERTCPACGSAIEDDDASVFFDGEMYHVGCAPGAQPWPPPPRQPRWD*
Ga0070708_10022973913300005445Corn, Switchgrass And Miscanthus RhizosphereMDEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0066686_1000649133300005446SoilMDDLERTCPACGSAIEDDDASVFFDGEMYHVGCAPGAQPWPPPPRQPRWD*
Ga0066681_1055458823300005451SoilTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0070706_10181643523300005467Corn, Switchgrass And Miscanthus RhizosphereMAEERTCPACGEAIEDGETLVFFDSEMYHVNCAPGAQPWPPPPRQPRWD*
Ga0070741_1003296473300005529Surface SoilMNEPERTCPTCGDRIDDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF*
Ga0070697_10068391613300005536Corn, Switchgrass And Miscanthus RhizosphereMDEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQ
Ga0070696_10075529523300005546Corn, Switchgrass And Miscanthus RhizosphereMQERERTCPACDGAIETGETVVFFEGEMYHVRCAPGATPPPRTPRFD*
Ga0066704_1003887243300005557SoilMDEVERTCPACGGALEDNDASVFFGGEMYHVGCAPGAPSWPPPPRQPRWD*
Ga0066703_1069290013300005568SoilMDEVERTCPACGGALEDNDPSVFFGGEMYHVGCAPGAPSWPPPPRQPR
Ga0066691_1021809213300005586SoilMDEVERTCPACGGALEDNDASVFFGGEMYHVGCAPGAPSWPPP
Ga0066905_10060460023300005713Tropical Forest SoilMDALERTCPACGAAIEDDDASVFFDGEMYHVACAPGAPQWPPPPRQPRWD*
Ga0075417_1000521473300006049Populus RhizosphereMDDLERTCLACGRAIEEDDASVFFAGDMYHVDCAPGASPWPPPPRQPRWD*
Ga0079222_1012314023300006755Agricultural SoilMEDLERTCPTCGGTIEDDDASVFFAGEMYHVNCAPGAQPWPPPPRQPRWD*
Ga0079222_1061892823300006755Agricultural SoilMDGPERTCPTCGDGIEDGETVVFFGGEMFHLDCAPGAIPWPPPPREPRF*
Ga0079222_1232760023300006755Agricultural SoilMDEVPRLCPACGDAIEDDDASVFFAGEMYHVACAPGASPWPPPPRQPRWD*
Ga0066658_1015783233300006794SoilAAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0079221_1020446713300006804Agricultural SoilMEDLERTCPTCGGAIEDDDASVFFAGEMYHVNCAPGAQPWPPPPRQPRWD*
Ga0075428_10008262123300006844Populus RhizosphereMDRVERTCPTCGDRIEDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF*
Ga0075421_10004223173300006845Populus RhizosphereMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF*
Ga0075421_10036847823300006845Populus RhizosphereMEGTERTCPACGDRIEDGETVVFFGGEMYHLDCAPGALSWPPPPREPRF*
Ga0075433_1146910123300006852Populus RhizosphereMDDPERTCPSCGGAIEEDDASVFFDGEMYHVACAPGAQPWPPPPRQPRWD*
Ga0079217_1017584223300006876Agricultural SoilMDGTERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF*
Ga0079215_1022438723300006894Agricultural SoilCGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF*
Ga0075436_10109635923300006914Populus RhizosphereMDEPERICPACGVAIEEDETLVFFDGEMYHVACAPGAEAWPPPPR
Ga0079219_1020373423300006954Agricultural SoilMDDLERTCPTCGGAIEDDDASVFFAGEMYHVNCAPGAQPWPPPPRQPRWD*
Ga0079219_1119272213300006954Agricultural SoilRIDDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF*
Ga0099791_1006913323300007255Vadose Zone SoilMAEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0099794_1005008443300007265Vadose Zone SoilAEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0099794_1048444223300007265Vadose Zone SoilERICPACGVAIEEDETLVFFDDEMYHVACAPGAEPWPPPPRQPRF*
Ga0075418_1000137213300009100Populus RhizosphereTCGGPIEDDDASVFFDGEMYHVGCAPGAPSWPPPPRQPRWD*
Ga0075418_1000539813300009100Populus RhizosphereAIEEDDASVFFAGDMYHVDCAPGASPWPPPPRQPRWD*
Ga0114129_1069506823300009147Populus RhizosphereMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVPWPPPP
Ga0111538_1292672323300009156Populus RhizosphereDRVERTCPTCGDRIEDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF*
Ga0127453_103397623300010102Grasslands SoilDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD*
Ga0134082_1024483323300010303Grasslands SoilACGEAIEDGEALVFFDGEMYHVKCAPGASPWPPPPRQPRWD*
Ga0134109_1035081813300010320Grasslands SoilMDDVDRTCLACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0134064_1007957713300010325Grasslands SoilMEEERTCPACGEAIEDGEALVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0134065_1033426723300010326Grasslands SoilEEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0134063_1001472013300010335Grasslands SoilACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0137392_1087818113300011269Vadose Zone SoilAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0137393_1028367313300011271Vadose Zone SoilEERTCPACGEAIEDGETLVFFDSEMYHVNCAPGAQPWPPPPRQPRWD*
Ga0137399_1022940423300012203Vadose Zone SoilMDEQERTCPACGGVIEDDAALVFFDGEMYHVACAPGAQAWPPPPRQPRWD*
Ga0137399_1044914423300012203Vadose Zone SoilMDEPERICPACGVAIEEDETLVFFDGEMYHVACAPGAEPWPPPPRQPRF*
Ga0137362_1015246823300012205Vadose Zone SoilMAEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0134056_112222313300012397Grasslands SoilTGCMDERERTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD*
Ga0134055_136693713300012401Grasslands SoilRTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD*
Ga0137397_1006168413300012685Vadose Zone SoilMDEQERTCPACGDAIEDGEALVFFDGEMYHVACAPGAQPWPPPPRQPRWD*
Ga0137396_1038119323300012918Vadose Zone SoilMDEQERTCPTCGGVIEDGETLVFFDGEMYHVACAPGAASWPPPPRQPRWD*
Ga0137394_1019516023300012922Vadose Zone SoilMDESERICPACGVAIEEDETLVFFDGEMYHVACAPGAEPWPPPPRQPRF*
Ga0137404_1011670023300012929Vadose Zone SoilMDEVERTCPACGDAIEDGEALVFFDGEMYHVACAPGAQPWPPPPRQPRWD*
Ga0137404_1116129223300012929Vadose Zone SoilEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD*
Ga0137407_10000829213300012930Vadose Zone SoilMDEQERACPACGDAIEDGEALVFFDGEMYHVACAPGAQPWPPPPRQPRWD*
Ga0134078_1007607313300014157Grasslands SoilPACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD*
Ga0134079_1069565513300014166Grasslands SoilMEEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWP
Ga0075324_102257933300014263Natural And Restored WetlandsACGERIEDGETVVFFGGEMYHLECAPGARLWPPRPREPRF*
Ga0075310_105319023300014302Natural And Restored WetlandsMDVTERRCPACGERIEDGETVVFFGGEMYHLECAPGARLWPPRP
Ga0137418_1001545893300015241Vadose Zone SoilMEEERTCPACGEAIEEGETLVFFDSEMYHVKCAPGASPWPPPPRQPRWD*
Ga0180085_103053423300015259SoilMEGTERNCPACGDLIEDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF*
Ga0132258_1019713863300015371Arabidopsis RhizosphereMDEARRFCPACGDAIEDDDASVFFASEMYHVACAPGASPWPPPPRQPRWD*
Ga0066655_1000090393300018431Grasslands SoilMDERERTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD
Ga0066655_1019212623300018431Grasslands SoilMDDVERTCPACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD
Ga0066667_1000177433300018433Grasslands SoilMDARERTCPACGGVIDDGETLVFFDGEMYHVACAPGATSWPPPPRQPRWD
Ga0066667_1006540133300018433Grasslands SoilMEEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0066662_1000444973300018468Grasslands SoilMDERERTCPACGGVIDDGETLVFFDGEMYHDACAPGATSWPPPPRQPRWD
Ga0066669_1055346743300018482Grasslands SoilACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0066669_1244478513300018482Grasslands SoilMEEERTCPACGEAIEDGEALVFFDGEMYHVKCAPGASPWPPPPRQPRWD
Ga0179594_1006663823300020170Vadose Zone SoilMDDLERTCPACGSAIEDDDASVFFDGEMYHVGCAPGAQPWPPPPRQPRWD
Ga0179594_1021414713300020170Vadose Zone SoilMAEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0210087_103197223300025559Natural And Restored WetlandsMDVTERRCPACGERIEDGETVVFFGGEMYHLECAPGARLWPPRPREPRF
Ga0209237_102481243300026297Grasslands SoilMDEQERTCPACGGVIEDGETLVFFDGEMYHVACAPGATSWPPPLRQPRWD
Ga0209237_105141423300026297Grasslands SoilMDEPERTCPACGGTIESDDAVVFFDGEMYHVACAPGAESLPREPRY
Ga0209027_110955213300026300Grasslands SoilMEEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0209153_103749323300026312SoilMDDGERTCPSCGGAIEDDDASVFFDGEMYHVACAPGAQPWPPPPRQPRWD
Ga0209761_122078723300026313Grasslands SoilCPACGSAIEDDDASVFFDGEMYHVGCAPGAQPWPPPPRQPRWD
Ga0209266_105084833300026327SoilMDDVELTCPACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD
Ga0209473_122547413300026330SoilTGHMEEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0209376_131433023300026540SoilMDDVDRTCLACGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD
Ga0209805_113248633300026542SoilMEEERTCPACGEAIEDGEALVFFDGEMYHVKCAPGASPWPPPPRQPR
Ga0209156_1028372023300026547SoilCGSAIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD
Ga0209161_1020746723300026548SoilMDDVERTCPACGSGIEDDDASVFFDGEMYHVDCAPGAQPWPPPPRQPRWD
Ga0209818_105957223300027637Agricultural SoilSTERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0209818_129280223300027637Agricultural SoilMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0209588_116148513300027671Vadose Zone SoilIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0209011_117779923300027678Forest SoilMDEERTCPACGEAIEDGETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0209971_106223323300027682Arabidopsis Thaliana RhizosphereMDGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVPWPPPPREPRF
Ga0209485_129769213300027691Agricultural SoilGPERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0209998_1020947623300027717Arabidopsis Thaliana RhizospherePACGDRIEDGETVVFFGGEMFHLDCAPGAVPWPPPPREPRF
Ga0209689_134736323300027748SoilMEEERTCPACGEAIEDDETLVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0209486_1005427533300027886Agricultural SoilMDGTERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0209382_1022699823300027909Populus RhizosphereMEGTERTCPACGDRIEDGETVVFFGGEMYHLDCAPGALSWPPPPREPRF
Ga0209382_1088747423300027909Populus RhizosphereMDRVERTCPTCGDRIEDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF
Ga0137415_1023574153300028536Vadose Zone SoilMEEERTCPACGEAIEEGETLVFFDSEMYHVKCAPGASPWPPPPRQPRWD
Ga0307408_10001759523300031548RhizosphereMDGPERTCPSCGDRIDDGETVVFFGGEMFHLDCAPGALPWPPPPREPRF
Ga0307408_10013262223300031548RhizosphereMDGPERACPACGDPIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0307408_10175354913300031548RhizosphereYTLSMDGVERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0310813_1062796433300031716SoilMDEARRLCPACGDAIEDDDASVFFAGEMYHVACAPGALPWPPPPRQPRWD
Ga0307469_1173086823300031720Hardwood Forest SoilMDEERTCPACGEAIEDGEALVFFDSEMYHVKCAPGAQPWPPPPRQPRWD
Ga0307473_1038237923300031820Hardwood Forest SoilMAEERTCPACGEAIEDGETLVFFDSEMYHVNCAPGAQPWPPPPRQPRWD
Ga0307410_1141654923300031852RhizospherePGGRLASMDVTERRCPACGERIEDGETVVFFGGEMYHLECAPGAPLWPPRPREPRF
Ga0307406_1164209723300031901RhizosphereMNGPERACPACGEPIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0307412_1066545623300031911RhizosphereMDGVERTCPACGDPIEDGETVVFFGGEMFHLDCAPGTLAWPPPPREPRF
Ga0307411_1026065233300032005RhizosphereMDGPERACPACGEPIEDGETVVFFGGEMFHLDCAPGAVAWPPPPREPRF
Ga0247829_1151874323300033550SoilMEGTERTCPACGDRIEDGETVVFFGGEMFHLDCAPGAIAWPPPPREPRF
Ga0364946_044700_57_2063300033815SedimentMEGTERNCPACGDLIEDGETVVFFGGEMYHLDCAPGALPWPPPPREPRF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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