NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067499

Metagenome / Metatranscriptome Family F067499

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067499
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 63 residues
Representative Sequence YWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Number of Associated Samples 104
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.63 %
% of genes near scaffold ends (potentially truncated) 94.40 %
% of genes from short scaffolds (< 2000 bps) 87.20 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.200 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(34.400 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.400 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 37.78%    Coil/Unstructured: 62.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00916Sulfate_transp 26.40
PF13590DUF4136 19.20
PF13792Obsolete Pfam Family 9.60
PF01740STAS 4.80
PF07589PEP-CTERM 4.80
PF00313CSD 4.00
PF06826Asp-Al_Ex 3.20
PF12680SnoaL_2 1.60
PF13365Trypsin_2 1.60
PF13432TPR_16 0.80
PF05235CHAD 0.80
PF11937DUF3455 0.80
PF00696AA_kinase 0.80
PF16576HlyD_D23 0.80
PF04226Transgly_assoc 0.80
PF13084DUF3943 0.80
PF02954HTH_8 0.80
PF00076RRM_1 0.80
PF14534DUF4440 0.80
PF07021MetW 0.80
PF00069Pkinase 0.80
PF01266DAO 0.80
PF02769AIRS_C 0.80
PF01476LysM 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 26.40
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 26.40
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 26.40
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.20
COG2985Uncharacterized membrane protein YbjL, putative transporterGeneral function prediction only [R] 3.20
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 0.80
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 0.80
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.20 %
UnclassifiedrootN/A12.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000890|JGI11643J12802_12045282All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300000956|JGI10216J12902_118293578All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300002128|JGI24036J26619_10093253Not Available610Open in IMG/M
3300004156|Ga0062589_100454297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1062Open in IMG/M
3300004643|Ga0062591_101444681All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300005289|Ga0065704_10244840All Organisms → cellular organisms → Bacteria → Acidobacteria1005Open in IMG/M
3300005289|Ga0065704_10706918All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005293|Ga0065715_10528391All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300005294|Ga0065705_10588978All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005328|Ga0070676_10308303All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300005335|Ga0070666_10174472All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300005339|Ga0070660_101702819All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005340|Ga0070689_101033287All Organisms → cellular organisms → Bacteria → Acidobacteria732Open in IMG/M
3300005344|Ga0070661_101602951All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005353|Ga0070669_100762924All Organisms → cellular organisms → Bacteria → Acidobacteria820Open in IMG/M
3300005354|Ga0070675_101229344Not Available690Open in IMG/M
3300005364|Ga0070673_100380741All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300005457|Ga0070662_100319095All Organisms → cellular organisms → Bacteria → Acidobacteria1266Open in IMG/M
3300005459|Ga0068867_100384800All Organisms → cellular organisms → Bacteria → Acidobacteria1179Open in IMG/M
3300005466|Ga0070685_10013451All Organisms → cellular organisms → Bacteria → Proteobacteria4316Open in IMG/M
3300005540|Ga0066697_10616748All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005544|Ga0070686_100041644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_212872Open in IMG/M
3300005548|Ga0070665_100831867All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300005549|Ga0070704_100343910All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300005549|Ga0070704_101010381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300005564|Ga0070664_100170664All Organisms → cellular organisms → Bacteria → Proteobacteria1929Open in IMG/M
3300005618|Ga0068864_100273744All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300005840|Ga0068870_10941636All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300005843|Ga0068860_102338586All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300006844|Ga0075428_100504416All Organisms → cellular organisms → Bacteria1294Open in IMG/M
3300006844|Ga0075428_101353063All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300006852|Ga0075433_10004312All Organisms → cellular organisms → Bacteria11044Open in IMG/M
3300006854|Ga0075425_101690968All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300006871|Ga0075434_100427359All Organisms → cellular organisms → Bacteria1346Open in IMG/M
3300006881|Ga0068865_100284784All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300009094|Ga0111539_10068588All Organisms → cellular organisms → Bacteria → Acidobacteria4187Open in IMG/M
3300009094|Ga0111539_12202823All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300009098|Ga0105245_12356338All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300009100|Ga0075418_10998211All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300009176|Ga0105242_11202140All Organisms → cellular organisms → Bacteria → Nitrospirae777Open in IMG/M
3300009551|Ga0105238_11071699All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium828Open in IMG/M
3300009610|Ga0105340_1566375All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300010046|Ga0126384_11590843Not Available615Open in IMG/M
3300010362|Ga0126377_10585250All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300010397|Ga0134124_12797129All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300010399|Ga0134127_11052933All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300011119|Ga0105246_10015668All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4790Open in IMG/M
3300012511|Ga0157332_1009183All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300012893|Ga0157284_10077748All Organisms → cellular organisms → Bacteria → Acidobacteria821Open in IMG/M
3300012898|Ga0157293_10061127Not Available869Open in IMG/M
3300012908|Ga0157286_10478187All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012912|Ga0157306_10154612All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300012913|Ga0157298_10091642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium804Open in IMG/M
3300012916|Ga0157310_10467752All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012971|Ga0126369_11364451All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300013296|Ga0157374_12861571Not Available510Open in IMG/M
3300014965|Ga0120193_10082405Not Available533Open in IMG/M
3300015200|Ga0173480_10877119Not Available580Open in IMG/M
3300015201|Ga0173478_10305156All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300015371|Ga0132258_11269991All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300015371|Ga0132258_11576818All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300015371|Ga0132258_12876839All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1197Open in IMG/M
3300015372|Ga0132256_102998588All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300015373|Ga0132257_100191688All Organisms → cellular organisms → Bacteria2417Open in IMG/M
3300015373|Ga0132257_102151531All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300015374|Ga0132255_102784984All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.748Open in IMG/M
3300015374|Ga0132255_105584778All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300015374|Ga0132255_105651162All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300015374|Ga0132255_105697605Not Available527Open in IMG/M
3300015374|Ga0132255_105791288All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300018469|Ga0190270_10043112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3067Open in IMG/M
3300018476|Ga0190274_10682226All Organisms → cellular organisms → Bacteria → Acidobacteria1069Open in IMG/M
3300019263|Ga0184647_1166824All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300019362|Ga0173479_10589162All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300023266|Ga0247789_1127325All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300025903|Ga0207680_10610345All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300025903|Ga0207680_10824265All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300025904|Ga0207647_10610854All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300025908|Ga0207643_10472604All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium799Open in IMG/M
3300025919|Ga0207657_10622622All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes841Open in IMG/M
3300025930|Ga0207701_10116033All Organisms → cellular organisms → Bacteria → Acidobacteria2389Open in IMG/M
3300025936|Ga0207670_10097178Not Available2096Open in IMG/M
3300025936|Ga0207670_10531898All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300025940|Ga0207691_10524498All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300025945|Ga0207679_10322050All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300025945|Ga0207679_11006893All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300025961|Ga0207712_11595548Not Available585Open in IMG/M
3300025972|Ga0207668_10102023All Organisms → cellular organisms → Bacteria → Acidobacteria2134Open in IMG/M
3300025986|Ga0207658_10647806All Organisms → cellular organisms → Bacteria → Acidobacteria952Open in IMG/M
3300026023|Ga0207677_11247920All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300026089|Ga0207648_12276737All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300026095|Ga0207676_10367212All Organisms → cellular organisms → Bacteria → Acidobacteria1336Open in IMG/M
3300028379|Ga0268266_10735892All Organisms → cellular organisms → Bacteria → Acidobacteria951Open in IMG/M
3300028380|Ga0268265_12169738Not Available562Open in IMG/M
3300028592|Ga0247822_11527584Not Available565Open in IMG/M
3300028809|Ga0247824_10630748Not Available647Open in IMG/M
3300028812|Ga0247825_10007722All Organisms → cellular organisms → Bacteria7050Open in IMG/M
3300028812|Ga0247825_10165857All Organisms → cellular organisms → Bacteria → Acidobacteria1519Open in IMG/M
3300030584|Ga0247658_1145078All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300031226|Ga0307497_10539187All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300031547|Ga0310887_10165336All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia ptereochthonis1174Open in IMG/M
3300031562|Ga0310886_10000390All Organisms → cellular organisms → Bacteria11550Open in IMG/M
3300031562|Ga0310886_10166042All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300031562|Ga0310886_10423876All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300031852|Ga0307410_10821478All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300031858|Ga0310892_11135115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300031858|Ga0310892_11343993All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031908|Ga0310900_10370138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1079Open in IMG/M
3300031940|Ga0310901_10359093All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300031943|Ga0310885_10040657All Organisms → cellular organisms → Bacteria1878Open in IMG/M
3300031944|Ga0310884_10156522All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300032000|Ga0310903_10266080All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300032003|Ga0310897_10493707Not Available593Open in IMG/M
3300032012|Ga0310902_10443928All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300032012|Ga0310902_10522365All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300032075|Ga0310890_10017935All Organisms → cellular organisms → Bacteria → Acidobacteria3562Open in IMG/M
3300032122|Ga0310895_10210199All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300032122|Ga0310895_10450874All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300032179|Ga0310889_10028830All Organisms → cellular organisms → Bacteria → Proteobacteria2017Open in IMG/M
3300033475|Ga0310811_10305158All Organisms → cellular organisms → Bacteria1828Open in IMG/M
3300033550|Ga0247829_11018466All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300034673|Ga0314798_145065All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300034676|Ga0314801_101933All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.20%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere8.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.40%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.40%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.60%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.80%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.80%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014965Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300023266Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030584Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb11 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034673Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034676Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J12802_1204528223300000890SoilLSPAAPFTTWIVGGEWYIHPSIRLSPNLETARYTHDPDPVNFPGRRQDSILRLTFFWTF*
JGI10216J12902_11829357813300000956SoilQSPFTTWIVGGEWYLHPSIRLSPNLESVRYAKDPDPTNFPGRRQDSILRLTFFWTF*
JGI24036J26619_1009325323300002128Corn, Switchgrass And Miscanthus RhizosphereGLPGADGIDYWLLSSEAPFTTWIVGGEWFLHPSVRIGPNFELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0062589_10045429713300004156SoilPGAEGIDYWLLSSQSPFTTWIAGSEWYLHPSVRLSPNLEMVRYADDPDPVNLPGRRVDALLRLTFFWTF*
Ga0062591_10144468113300004643SoilIDYWLLSPQSPFTTWIVGGEWYLHPAVRVSPNLEVVRYANDPDPANFPGRNQDSIFRLTFFWTF*
Ga0065704_1024484023300005289Switchgrass RhizosphereAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPMNYPGRRQDAQVRFTFFWTF*
Ga0065704_1070691813300005289Switchgrass RhizosphereIDYWLLSPAAPFTTWIFGGELYLHPNIRLSPNLETARYAHDPDPVNFPGRRQDSILRLTFFWTF*
Ga0065715_1052839113300005293Miscanthus RhizosphereLPGADGIDYWLLSSEAPFTTWIVGGEWFLHPSVRIGPNFELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0065705_1058897823300005294Switchgrass RhizosphereWIGGGEWFLHPSVRLSPNLEFVRYSKDPDPVNFAGRRQDAILRLTFFWTF*
Ga0070676_1030830323300005328Miscanthus RhizosphereIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0070666_1017447223300005335Switchgrass RhizosphereQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0070660_10170281923300005339Corn RhizosphereDYWLMSPQSNFTTWIVGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDKDSIFRLTFFWTF*
Ga0070689_10103328723300005340Switchgrass RhizosphereVGGEWFLHPSVRIGPNFELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0070661_10160295113300005344Corn RhizosphereRGGVETGLSGAEGIDYWLLSSRSPFTTWITGAEWYLHPNVRVGPNLELVQYAHDPDPVAFPGRDQDAVLRVTFYWSF*
Ga0070669_10076292413300005353Switchgrass RhizosphereGGVETGLPGAEGIDYWLLSSQSPFTTWILGGEWYLHPAVRLSPNLEMVRYESEPDPTNFPGRRQDSLLRLTFFWTF*
Ga0070675_10122934413300005354Miscanthus RhizosphereTGLPGAEGIDYLVLSIQSPFTTWILGGEWFLHPSVRLGPNLEVVRYAHDPDPVNLPGRNRDSIFRMTFFWTF*
Ga0070673_10038074113300005364Switchgrass RhizospherePFTMWIGGGEWFLHPSVRLSPNLEFVRYSKDPDPVNFAGRRQDAILRLTFFWTF*
Ga0070662_10031909513300005457Corn RhizosphereFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPMNYPGRRQDAQVRFTFFWTF*
Ga0068867_10038480013300005459Miscanthus RhizosphereGLPGAEGIDYWLLSSQSPFTTWILGGEWYLHPAVRLSPNLEMVRYESEPDPTNFPGRRQDSLLRLTFFWTF*
Ga0070685_1001345163300005466Switchgrass RhizospherePGADGIDYWLLSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0066697_1061674813300005540SoilLPGADTIDYWLLSTESPFHTWIFGGEWYVHPSVRVSPNLEMVAYAHDPDPASFPGRHRDSILRLTFFWTF*
Ga0070686_10001735213300005544Switchgrass RhizosphereGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRVTFFWTF*
Ga0070686_10004164413300005544Switchgrass RhizosphereGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0070665_10083186713300005548Switchgrass RhizosphereSQSPFSTWILGGEWYLHPSVRLGPNLELIRYAHDPDPIDLPGRDRDSIFRVTFFWTF*
Ga0070704_10034391013300005549Corn, Switchgrass And Miscanthus RhizosphereETGLPGADGIDYWLMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRVTFFWTF*
Ga0070704_10101038113300005549Corn, Switchgrass And Miscanthus RhizosphereAPFTTWIVGGEWFLHPSVRIGPNFELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0070664_10017066413300005564Corn RhizosphereETGLPGADGIDYWLLSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0068864_10027374413300005618Switchgrass RhizosphereQSPFTTWIVGAEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF*
Ga0068870_1094163623300005840Miscanthus RhizosphereGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF*
Ga0068860_10233858623300005843Switchgrass RhizosphereEIDYLLLSPQSKFTMWIFGGEVYLHPAVRFSPNLELVNYAHDPDPVNFPGRDRDSIARLTFFWMF*
Ga0075428_10050441643300006844Populus RhizosphereEDIDYLLLSSKSPFKMWILGGEWHLLPSVRVGPNLELVRYASDPDPLNFPGRNRDSILRLTFFWTF*
Ga0075428_10135306323300006844Populus RhizosphereLETGLPGANEIDYWLLSPQSPFTTWIVGGEWYLHPAVRLSPNFELVRYASEPDPTNFPGRRQDSIFRVTFFWTF*
Ga0075433_10004312123300006852Populus RhizosphereSNFTTWIVGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0075425_10169096823300006854Populus RhizosphereFTTWVVGAERYLHPHVRLSPNLELVRYAHDPDPTNFPGRRKDSVLRLTFFWTF*
Ga0075434_10042735913300006871Populus RhizosphereTGLPGADGIDYWLLSPAAPFTTWIIGGEWFVHPSIRVSPNLEMARYTHDPDPVSFPGRNQDSILRLTFFWTF*
Ga0068865_10028478433300006881Miscanthus RhizosphereWLLSSQSPFTTWILGGEWYLHPAVRLSPNLEMVRYTDEPDPVNNPGRRQDAQVRFTFFWTF*
Ga0111539_1006858813300009094Populus RhizosphereSQSPFTTWILGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPGRNRDSIFRMTFFWTF*
Ga0111539_1220282333300009094Populus RhizosphereSSKSPFKMWILGGEWHLLPSVRVGPNLELVRYASDPDPLNFPGRNRDSILRLTFFWTF*
Ga0105245_1235633823300009098Miscanthus RhizosphereFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF*
Ga0075418_1099821123300009100Populus RhizosphereFTTWIFGGEWYLHPAVRLGPNLELVRYANDPDPTNFPGRRQDSMFRVTFFWTF*
Ga0105243_1142133723300009148Miscanthus RhizosphereGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0105242_1120214013300009176Miscanthus RhizosphereLVLSSQSPFTTWILGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPARNRDSIFRMTFFWTF*
Ga0105238_1107169923300009551Corn RhizosphereFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0105340_156637513300009610SoilEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF*
Ga0126384_1159084313300010046Tropical Forest SoilSQSPFTTWIFGGEWYVHKNVRLGPNFEIVRYSHDPDPVNLPGRDLDSIFRVTFYWTF*
Ga0126377_1058525023300010362Tropical Forest SoilAEDIDYLLLSSQSPFSTWIVGGEWYLHPAVRMGPNLEIVRYRHEPDPVQFPGRRQDAILRFTFYWTF*
Ga0134124_1279712923300010397Terrestrial SoilVEGVLAGTETGLPDAEEIDYLLPSSQSPFSTWIVGGQWHAHPTVSLGPNLEVVRYRHEPDPVQFPGRRQDTVLRFTFYWTF*
Ga0134127_1105293323300010399Terrestrial SoilLVVTVSWVSNRLSELLLSSQAPFATWIAGGEWYLHPAVRFGPNLEIVRYTHDPDPVQLPGRRQDAILRFTFYWTF*
Ga0105246_1001566813300011119Miscanthus RhizosphereGLPGADGIDYWLMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0157332_100918313300012511SoilGAETGLPGADGIDYWLMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF*
Ga0157284_1007774823300012893SoilGLPGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF*
Ga0157293_1006112713300012898SoilTTWIFGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPGRNRDSIFRMTFFWTF*
Ga0157286_1047818723300012908SoilLSPQSPFTTWIVGGEWYLHPAVRVSPNLEVVRYANDPDPANFPGRNQDSIFRLTFFWTF*
Ga0157306_1015461223300012912SoilPGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPMNYPGRRQDAQVRFTFFWTF*
Ga0157298_1009164223300012913SoilMSPFTTWIAGSEWYLHPSVRLSPNLEMVRYADDPDPVNLPGRRVDALLRLTFFWTF*
Ga0157310_1046775223300012916SoilTGLPGADEIDYLLLSPQSKFTMWIFGGEVYLHPAVRFSPNLELVNYAHDPDPVNFPGRDRDSIARLTFFWTF*
Ga0126369_1136445123300012971Tropical Forest SoilLSPQAPFTTWILGSEWYLHPSVRVGPNLELARYTKDPDPVNHPGRRQDSILRFSFFWTF*
Ga0157374_1286157123300013296Miscanthus RhizosphereGRETGLPGAEGIDYWLLSSQSPFSTWITGGEWYLHPSVRVGPNLEIVQYTHDPDPAQFPGRRQDAILRFTFYWTF*
Ga0120193_1008240523300014965TerrestrialTGLPGAEDIDYLILSSASEFTTWILGAEWYLHPSVRVGPNLELVKYADDPDPVNFPGRDEDRIYRITFYWKF*
Ga0173480_1087711923300015200SoilGDLETGLPGADGIDYWVLSTQSPFNTWIFGGEWYVHPAVRLSPNIEIVKYDHDPDPVARPGRNQDSMFRLTFFWTF*
Ga0173478_1030515613300015201SoilGIDYWLLSSEAPFTTWIVGGEWFLHPSVRIGPNFELVSYAHDPNPITFPGRDRDAILRLTFYWSF*
Ga0132258_1126999113300015371Arabidopsis RhizosphereDYWLLSPAAPFTTWIVGGEWFVHPSIRVSPNIEMARYTHDPDPVSFPGRNQDSILRLTFFWTF*
Ga0132258_1157681823300015371Arabidopsis RhizosphereVETGLPGAEGIDYWILSSQSPFVVWIFGGEWYLHPSVRVGPNLELAKYAHDPDPTNFPGRRNDSIFRVTFFWTF*
Ga0132258_1287683913300015371Arabidopsis RhizosphereIDYWLLSSQSPFTTWILGAEWYLHPSVRLGPNLELVRYAMEPDPTAFPGRRQDSILRMTFFWTF*
Ga0132256_10299858823300015372Arabidopsis RhizosphereLGGIETGLPDAEAIDYLLLSSQAPFSTWIVGGEWYLHPDVRMGPNLELVRYTREPDPVQFPGRRQDAILRFTFFWTF*
Ga0132257_10019168833300015373Arabidopsis RhizosphereDYWLLSPKSPFTTWIAGAEWYLHPNVRVGPNLELVQYAHDPDPVAFPGRDQDALLRITFYWSF*
Ga0132257_10215153113300015373Arabidopsis RhizosphereGIDYWLLSTEAPFTTWIVGGEWYLHPSIRLSPNLETARYARDPDPVSFPNRRQDSILRLTFFWTF*
Ga0132255_10278498423300015374Arabidopsis RhizosphereLLLSSRSPFSTWIFGGEWYLHPSVRMGPNLEIVKYTHAPDPEQFPGREQDAMLRFTFYWTF*
Ga0132255_10558477823300015374Arabidopsis RhizosphereGIETGLPDAEGIDYWLLSSQAPFSTWIAGGEWYLHPAVRFGPNLEIARYTREPDPVQFPGRRQDAILRFTFYWTF*
Ga0132255_10565116213300015374Arabidopsis RhizosphereIDYWLLSTEAPFTTWIVGGEWYLHPSIRLSPNLETVRYARDPDPVSFPNRRQDSILRLTFFWTF*
Ga0132255_10569760513300015374Arabidopsis RhizosphereGIDYLVLSSQSPFTTWIFGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPGRNRDSIFRMTFFWTF*
Ga0132255_10579128823300015374Arabidopsis RhizosphereLLSSQSRFTMWIVGAEWYLHPSVRLSPNLELVRYRTDPDPVNFPGRRQDSILRLTFFWTF
Ga0190270_1004311213300018469SoilDYWLLSSQSPFTTWILGGEWYLHPAVRLSPNLEMVRYTDEPDPVNNPGRRQDAQVRFTFFWTF
Ga0190274_1068222623300018476SoilEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPMNYPGRRQDAQVRFTFFWTF
Ga0184647_116682413300019263Groundwater SedimentGIDYWLLSSQSPFTAWIFGGEWYLHPAVRLSPNLEMVRYTDEPDPVNNPGRRQDAQVRFTFFWTF
Ga0173479_1058916223300019362SoilVGGEWFLHPSVRIGPNLEIVSYAHDPNPITFPGRDRDAILRLTFYWSF
Ga0247789_112732523300023266SoilGADEIDYLLLSPQSKFTMWIFGGEVYLHPAVRFSPNLELVNYAHDPDPVNFPGRDRDSIARLTFFWTF
Ga0207680_1061034523300025903Switchgrass RhizosphereDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPMNYPGRRQDAQVRFTFFWTF
Ga0207680_1082426513300025903Switchgrass RhizosphereMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF
Ga0207647_1061085413300025904Corn RhizosphereGGVETGLPGADGIDYWLMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRVTFFWTF
Ga0207643_1047260433300025908Miscanthus RhizosphereLSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF
Ga0207657_1062262213300025919Corn RhizosphereMWIGGGEWFLHPSVRLSPNLEFVRYSKDPDPVNFAGRRQDAILRLTFFWTF
Ga0207701_1011603333300025930Corn, Switchgrass And Miscanthus RhizospherePFSTWILGGEWYLHPSVRLGPNLELIRYAHDPDPIDLPGRDRDSIFRVTFFWTF
Ga0207670_1009717833300025936Switchgrass RhizosphereFSTWILGGEWFLHPSVRLGPNLEVVRYAHDPDPVNLPGRNRDSIFRMTFFWTF
Ga0207670_1053189813300025936Switchgrass RhizosphereGIDYWLMSPQSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF
Ga0207691_1052449813300025940Miscanthus RhizosphereIETGLSGAEGIDYWLLSSRSPFTTWITGAEWYLHPNVRVGPNLELVQYAHDPDPVAFPGRDQDAVLRITFYWSF
Ga0207679_1032205013300025945Corn RhizosphereVSFNFAPQIVSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF
Ga0207679_1100689313300025945Corn RhizosphereGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0207712_1159554813300025961Switchgrass RhizosphereSSQSPFTTWILGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPARNRDSIFRMTFFWTF
Ga0207668_1010202333300025972Switchgrass RhizosphereSNFTTWIFGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDKDSIFRLTFFWTF
Ga0207658_1064780613300025986Switchgrass RhizosphereSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0207677_1124792023300026023Miscanthus RhizosphereIVGGEWYLHPSVRVGPNVEMARYSHDPDPAQFPGRRSDSILRLTFFWTF
Ga0207648_1227673723300026089Miscanthus RhizosphereGLPGAEGIDYWLLSSQSPFTTWILGGEWYLHPAVRLSPNLEMVRYESEPDPTNFPGRRQDSLLRLTFFWTF
Ga0207676_1036721223300026095Switchgrass RhizosphereSSQSPFTTWIVGAEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0268266_1073589223300028379Switchgrass RhizosphereLLLSSQSPFSTWILGGEWYLHPSVRLGPNLELIRYAHDPDPIDLPGRDRDSIFRVTFFWT
Ga0268265_1216973813300028380Switchgrass RhizosphereWILGGEWFLHPSVRLGPNLELVRYAHDPDPVNLPARNRDSIFRMTFFWTF
Ga0247822_1152758413300028592SoilWLLSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNSITFPGRDRDAILRLTFYWS
Ga0247824_1063074813300028809SoilDYWLLSPEAPFTTWIVGGEWFLHPSVRIGPNLELVSYAHDPNPITFPGRDRDAILRLTFYWSF
Ga0247825_1000772213300028812SoilDLGDLETGLPGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0247825_1016585713300028812SoilTGLPGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0247658_114507813300030584SoilSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0307497_1053918723300031226SoilEGIDYWLLSSQSPFTTWIVGGEWYLHSAVRLSPNLEMVRYADEPDPVNYPGRRQDTQVRFTFFWTF
Ga0310887_1016533613300031547SoilPFTMWIVGGEWFLNPSVRLSPNLEVVRYSKDPDPVNFPGRRQDSVLRLTFFWTF
Ga0310886_10000390133300031562SoilIDYWLMSPQSNFTTWIVGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF
Ga0310886_1016604213300031562SoilFATWIAGGEWYLHPAVRFGPNLEIVRYTHDPDPVQLPGRRQDAILRFTFYWTF
Ga0310886_1042387613300031562SoilPFATWIVGGEWYVHPAVRVSPNLEVVRYANDPDPTNFPGRNQDSIFRLTFFWTF
Ga0307410_1082147823300031852RhizosphereGLPGADGIDYWLLSRQSPFATWIIGGEWYLHPAVRVGPNLELVRYDREPDPANFPGRRQDSVFKVTFFWTF
Ga0310892_1113511523300031858SoilDYWLLSSQSPFTTWIAGSEWYLHPSVRLSPNLEMVRYADDPDPVNLPGRRVDALLRLTFFWTF
Ga0310892_1134399313300031858SoilGLPGAEDIDYLLLSSQAPFATWIAGGEWYLHPAVRFGPNLEIVRYTHDPDPVQLPGRRQDAILRFTFYWTF
Ga0310900_1037013813300031908SoilPFTTWIAGSEWYLHPTVRLSPNLEMVRYADDPDPVNLPGRRVDALLRLTFFWTF
Ga0310901_1035909313300031940SoilGLPGADEIDYWLLSPQSPFTTWIVGGEWYLHPAVRVSPNLELVRYTNDPDPTNFPGRNQDSIFRLTFFWTF
Ga0310885_1004065723300031943SoilDYWLLSSQSPFTMWIGGGEWFLHPSVRLSPNLEFVRYSKDPDPVNFAGRRQDAILRLTFFWTF
Ga0310884_1015652223300031944SoilLSTHSPFATWILGGEWYLHPAVRVSPNLELVRYESEPDPTSFPGRRQDAMFRVTFFWTF
Ga0310903_1026608023300032000SoilLLSSRSPFTMWIGGGEWFLHPSVRLSPNLELVRYGKDPDPLKFPGRRQDAILRLTFFWTF
Ga0310897_1049370713300032003SoilEIDYLLLSSKAPFSTWIVGGQWQVYPAVRFSPNLEVVRYTHEPEPAQFPGRRQDAMLRFTFYWTF
Ga0310902_1044392813300032012SoilYWLLSPQSPFTTWIVGGEWYVHPAVRVSPNLEVVRYANDPDPTNFPGRNQDSIFRLTFFWTF
Ga0310902_1052236513300032012SoilYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0310890_1001793513300032075SoilADGIDYWLMSPQSNFTTWIVGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF
Ga0310895_1021019923300032122SoilDLGGMETGLPGAEDIDYLLLSSQAPFATWIAGGEWYLHPAVRFGPNLEIVRYTHDPDPVQLPGRRQDAILRFTFYWTF
Ga0310895_1045087413300032122SoilWIFGGEWYVHPTVRFSPNLEIVRYADDPDPTLFPGRRQDSIFRFTFFWTF
Ga0310889_1002883033300032179SoilRLGDVETGLPGADGIDYWLLSPAAPFTTWIFGGELYLHPNIRLSPNLETARYAHDPDPVNFPGRRQDSILRLTFFWTF
Ga0310811_1030515823300033475SoilNFTTWIVGGEWYVHPSFRLGPNLELAKYANDPDPVNFPGRDQDSIFRLTFFWTF
Ga0247829_1101846623300033550SoilTWIFGGEWYLHPAVRLSPNLALVRYASEPDPVNFPGRRQDAMFRLTFFWTF
Ga0314798_145065_309_5363300034673SoilDLETGLPGAEGIDYWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWTF
Ga0314801_101933_459_6443300034676SoilWLLSSQSPFTTWIVGGEWYLHPAVRLSPNLEMVRYADEPDPVNYPGRRQDAQVRFTFFWT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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