Metagenome / Metatranscriptome Family F067442

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067442
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	79 residues
Representative Sequence	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAV
Number of Associated Samples	94
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.67 %
% of genes near scaffold ends (potentially truncated)	97.60 %
% of genes from short scaffolds (< 2000 bps)	95.20 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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Most Common Taxonomy
Group	Unclassified (80.800 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.800 % of family members)
Environment Ontology (ENVO)	Unclassified (77.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (58.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00072	Response_reg	0.80
PF13549	ATP-grasp_5	0.80
PF13561	adh_short_C2	0.80
PF04773	FecR	0.80
PF04545	Sigma70_r4	0.80
PF05494	MlaC	0.80
PF00536	SAM_1	0.80
PF08352	oligo_HPY	0.80
PF02515	CoA_transf_3	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.80
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
All Organisms	root	All Organisms	19.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
cellular organisms	root	All Organisms → cellular organisms	19.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.40 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.80 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.60 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.60 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.80 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Propionivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Propionivibrio	0.80 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.60 %
Candidatus Propionivibrio aalborgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Propionivibrio → Candidatus Propionivibrio aalborgensis	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320006\|FACEOR_FYWIORV02GFMZS	Not Available	513	Open in IMG/M
3300004633\|Ga0066395_10103634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1375	Open in IMG/M
3300004633\|Ga0066395_10657495	Not Available	619	Open in IMG/M
3300005363\|Ga0008090_15326400	Not Available	553	Open in IMG/M
3300005439\|Ga0070711_101910175	Not Available	522	Open in IMG/M
3300005554\|Ga0066661_10929317	Not Available	509	Open in IMG/M
3300006028\|Ga0070717_11738782	Not Available	564	Open in IMG/M
3300007255\|Ga0099791_10284769	Not Available	786	Open in IMG/M
3300009792\|Ga0126374_10079663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300009792\|Ga0126374_11866210	Not Available	504	Open in IMG/M
3300010048\|Ga0126373_11975849	Not Available	646	Open in IMG/M
3300010048\|Ga0126373_12890866	Not Available	536	Open in IMG/M
3300010359\|Ga0126376_11399717	Not Available	724	Open in IMG/M
3300010360\|Ga0126372_12727602	Not Available	546	Open in IMG/M
3300010361\|Ga0126378_12698406	Not Available	567	Open in IMG/M
3300010366\|Ga0126379_11552572	Not Available	767	Open in IMG/M
3300010366\|Ga0126379_13480970	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_101849832	Not Available	871	Open in IMG/M
3300012971\|Ga0126369_11676785	Not Available	725	Open in IMG/M
3300016294\|Ga0182041_10670645	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300016294\|Ga0182041_11021932	Not Available	748	Open in IMG/M
3300016319\|Ga0182033_11146270	Not Available	695	Open in IMG/M
3300016341\|Ga0182035_10408284	Not Available	1143	Open in IMG/M
3300016341\|Ga0182035_11918854	Not Available	537	Open in IMG/M
3300016357\|Ga0182032_10028068	All Organisms → cellular organisms → Bacteria	3391	Open in IMG/M
3300016371\|Ga0182034_11279331	Not Available	639	Open in IMG/M
3300016387\|Ga0182040_11046965	Not Available	682	Open in IMG/M
3300016422\|Ga0182039_11531937	Not Available	608	Open in IMG/M
3300016445\|Ga0182038_11593280	Not Available	587	Open in IMG/M
3300020199\|Ga0179592_10095520	Not Available	1365	Open in IMG/M
3300020583\|Ga0210401_10999200	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300021403\|Ga0210397_11063109	Not Available	629	Open in IMG/M
3300021560\|Ga0126371_10828904	Not Available	1070	Open in IMG/M
3300021560\|Ga0126371_11375516	Not Available	837	Open in IMG/M
3300022712\|Ga0242653_1097566	Not Available	535	Open in IMG/M
3300029636\|Ga0222749_10210253	Not Available	976	Open in IMG/M
3300030972\|Ga0075400_11556152	Not Available	506	Open in IMG/M
3300031543\|Ga0318516_10217679	Not Available	1104	Open in IMG/M
3300031543\|Ga0318516_10774509	Not Available	543	Open in IMG/M
3300031544\|Ga0318534_10529308	Not Available	672	Open in IMG/M
3300031545\|Ga0318541_10595325	Not Available	618	Open in IMG/M
3300031546\|Ga0318538_10371160	Not Available	773	Open in IMG/M
3300031561\|Ga0318528_10464806	Not Available	679	Open in IMG/M
3300031564\|Ga0318573_10170955	Not Available	1145	Open in IMG/M
3300031564\|Ga0318573_10470174	Not Available	677	Open in IMG/M
3300031573\|Ga0310915_10593756	Not Available	785	Open in IMG/M
3300031640\|Ga0318555_10724501	Not Available	537	Open in IMG/M
3300031668\|Ga0318542_10618051	Not Available	566	Open in IMG/M
3300031679\|Ga0318561_10590833	Not Available	611	Open in IMG/M
3300031681\|Ga0318572_10209700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1139	Open in IMG/M
3300031682\|Ga0318560_10550034	Not Available	625	Open in IMG/M
3300031713\|Ga0318496_10096365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300031719\|Ga0306917_10969567	Not Available	664	Open in IMG/M
3300031719\|Ga0306917_11516575	Not Available	515	Open in IMG/M
3300031724\|Ga0318500_10124022	Not Available	1196	Open in IMG/M
3300031744\|Ga0306918_10198661	Not Available	1510	Open in IMG/M
3300031744\|Ga0306918_10296989	Not Available	1244	Open in IMG/M
3300031744\|Ga0306918_11075600	Not Available	623	Open in IMG/M
3300031768\|Ga0318509_10064972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1901	Open in IMG/M
3300031768\|Ga0318509_10489368	Not Available	687	Open in IMG/M
3300031768\|Ga0318509_10526874	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300031769\|Ga0318526_10324638	Not Available	630	Open in IMG/M
3300031770\|Ga0318521_10701467	Not Available	614	Open in IMG/M
3300031779\|Ga0318566_10326088	Not Available	759	Open in IMG/M
3300031780\|Ga0318508_1063326	Not Available	993	Open in IMG/M
3300031780\|Ga0318508_1252219	Not Available	507	Open in IMG/M
3300031781\|Ga0318547_11079711	Not Available	502	Open in IMG/M
3300031782\|Ga0318552_10618216	Not Available	553	Open in IMG/M
3300031793\|Ga0318548_10131018	Not Available	1216	Open in IMG/M
3300031793\|Ga0318548_10216130	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031795\|Ga0318557_10359290	Not Available	669	Open in IMG/M
3300031796\|Ga0318576_10602222	Not Available	517	Open in IMG/M
3300031798\|Ga0318523_10434190	Not Available	652	Open in IMG/M
3300031805\|Ga0318497_10260470	Not Available	963	Open in IMG/M
3300031819\|Ga0318568_10088618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1841	Open in IMG/M
3300031819\|Ga0318568_10657348	Not Available	652	Open in IMG/M
3300031821\|Ga0318567_10493481	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031832\|Ga0318499_10434209	Not Available	501	Open in IMG/M
3300031835\|Ga0318517_10551646	Not Available	518	Open in IMG/M
3300031845\|Ga0318511_10231298	Not Available	827	Open in IMG/M
3300031845\|Ga0318511_10612105	Not Available	508	Open in IMG/M
3300031846\|Ga0318512_10346647	Not Available	742	Open in IMG/M
3300031860\|Ga0318495_10145699	Not Available	1068	Open in IMG/M
3300031880\|Ga0318544_10201493	Not Available	768	Open in IMG/M
3300031893\|Ga0318536_10122727	Not Available	1312	Open in IMG/M
3300031893\|Ga0318536_10511273	Not Available	603	Open in IMG/M
3300031894\|Ga0318522_10281800	Not Available	630	Open in IMG/M
3300031896\|Ga0318551_10046519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2174	Open in IMG/M
3300031897\|Ga0318520_10217554	Not Available	1132	Open in IMG/M
3300031910\|Ga0306923_10315376	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300031910\|Ga0306923_10469123	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300031910\|Ga0306923_11456849	Not Available	718	Open in IMG/M
3300031910\|Ga0306923_11562802	Not Available	687	Open in IMG/M
3300031912\|Ga0306921_10633749	Not Available	1233	Open in IMG/M
3300031912\|Ga0306921_10947365	Not Available	974	Open in IMG/M
3300031912\|Ga0306921_11084651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Propionivibrio → Candidatus Propionivibrio aalborgensis	898	Open in IMG/M
3300031912\|Ga0306921_12274378	Not Available	569	Open in IMG/M
3300031941\|Ga0310912_10155268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1729	Open in IMG/M
3300031941\|Ga0310912_10480924	Not Available	968	Open in IMG/M
3300031942\|Ga0310916_11529083	Not Available	543	Open in IMG/M
3300031947\|Ga0310909_10114425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2183	Open in IMG/M
3300031959\|Ga0318530_10180489	Not Available	863	Open in IMG/M
3300031959\|Ga0318530_10244122	Not Available	739	Open in IMG/M
3300032001\|Ga0306922_10942193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	894	Open in IMG/M
3300032001\|Ga0306922_12047002	Not Available	556	Open in IMG/M
3300032010\|Ga0318569_10242496	Not Available	837	Open in IMG/M
3300032041\|Ga0318549_10343441	Not Available	672	Open in IMG/M
3300032043\|Ga0318556_10036119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2329	Open in IMG/M
3300032051\|Ga0318532_10223953	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300032054\|Ga0318570_10173391	Not Available	970	Open in IMG/M
3300032059\|Ga0318533_10751648	Not Available	716	Open in IMG/M
3300032063\|Ga0318504_10264299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	811	Open in IMG/M
3300032064\|Ga0318510_10407606	Not Available	580	Open in IMG/M
3300032065\|Ga0318513_10100297	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300032090\|Ga0318518_10294845	Not Available	832	Open in IMG/M
3300032091\|Ga0318577_10115841	Not Available	1263	Open in IMG/M
3300032094\|Ga0318540_10431516	Not Available	636	Open in IMG/M
3300032205\|Ga0307472_100611465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300032261\|Ga0306920_104271187	Not Available	514	Open in IMG/M
3300033289\|Ga0310914_10663745	Not Available	937	Open in IMG/M
3300033289\|Ga0310914_10952122	Not Available	758	Open in IMG/M
3300033290\|Ga0318519_10246064	Not Available	1033	Open in IMG/M
3300033290\|Ga0318519_10848327	Not Available	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.80%
Loam	Environmental → Terrestrial → Soil → Loam	3.20%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320006	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030972	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORE_4458220	2032320006	Soil	EALSLLDSTAGAQNQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRRHLNLAGAFFGIGIAAVGALALL
Ga0066395_101036343	3300004633	Tropical Forest Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPEEVNPEPDHSSATMPTQDRPPAAEDPQQRRKHLNL
Ga0066395_106574951	3300004633	Tropical Forest Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTAGPQNQTAQIEDLRPAKEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAVAFFGIGIA
Ga0008090_153264001	3300005363	Tropical Rainforest Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLGSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTSMPTQDRPLSAEHPQQRRKHLTLAVAFFGIGI
Ga0070711_1019101751	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLHPAEEVDPEPDQSSTTMPTQDRPPAAEDPQQ
Ga0066661_109293171	3300005554	Soil	LGCAGEAAMSNLEFQRELSPEQISEALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMAAQDRPPAAEDPQQRKKHLNV
Ga0070717_117387822	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLHPAEEVDQEPDQSSTTMPTQDRPPAAEDPQ
Ga0099791_102847691	3300007255	Vadose Zone Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTTAAQDRPPATEDPQQRKKHLNVAVAF
Ga0126374_100796633	3300009792	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDREVDQPSTITASQDRPPAA
Ga0126374_118662101	3300009792	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDGTVGTQNQTVQIECLRPAEEDNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLCLAV
Ga0126373_119758492	3300010048	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDPQQ
Ga0126373_128908662	3300010048	Tropical Forest Soil	MSDLEFRRELSPEQIREALSLLDSKTDAQNHNLRAEDQSPPEEVDLEVDQSSTITASQDRPPAAEDPQQ
Ga0126376_113997172	3300010359	Tropical Forest Soil	MSDLEFQRELSPEQIREALSFLDSKRGAQNHNLRVEDQSPPEEVDLDVDQSSTITAGQDRPPAAEDPQQRKKYLNLAVAFYGLGI
Ga0126372_127276021	3300010360	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQDQNLRIGDLRPAEEVNPEPDQSSTTTAAPDRPSASEDLQPRKKHLNLAVALYGIGIAAV
Ga0126378_126984061	3300010361	Tropical Forest Soil	MSDLEFQRELSPEQIREALSLLESTARAQNQNLRIGDLSPAEEVNPAPDQSSTTLAMEDRPPAAEDPQQRKKHLKSTLAFF
Ga0126379_115525721	3300010366	Tropical Forest Soil	MREALSLLDSTARAQNQTVQIEDLPPPEEVNPEPDHSSATMPTQNRPPAAEDPQQRRKHLNLAVAFFGIGIAV
Ga0126379_134809702	3300010366	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDSTAGAQKQTMQIEDLRPPEEVNPEPDHSSTTMRTQDWFPAAEDPQQRRKHLNLAVAFFGIGIAAAGAL
Ga0126381_1018498321	3300010376	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTMQIEDLRPAEEVNPEPDQSSMTMPTQDRPPAAEDPQLRRKHLNSAV
Ga0126369_116767851	3300012971	Tropical Forest Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQTEDLRPAEEVNPEPDQSRTTMPTQDRPPAAENPQ*
Ga0182041_106706451	3300016294	Soil	LSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAE
Ga0182041_110219321	3300016294	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAF
Ga0182033_111462701	3300016319	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLAVAFFGI
Ga0182035_104082842	3300016341	Soil	LRSRGGATLSDLEFQRQLSPEQMREALSLLDSTTRTQNQTVQIEDLRPAEEVNPEPDQSSPTMPMQDRPPAA
Ga0182035_119188541	3300016341	Soil	LSDLEFQRELSPEQMREALSLLESSAGTQNQTVQIEDCVPLNPDQSSTTMPTQDRPPAAEDPQQRRKHL
Ga0182032_100280684	3300016357	Soil	LRSGDAKLSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRK
Ga0182034_112793311	3300016371	Soil	LSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRK
Ga0182040_110469651	3300016387	Soil	LRSGDAKLSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRSFEEVNPGLDQSSATMPTHDRPP
Ga0182039_115319371	3300016422	Soil	LRSGDAKLSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQR
Ga0182038_115932801	3300016445	Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHSSATMPTQDRPPAAEDPQQR
Ga0179592_100955202	3300020199	Vadose Zone Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSITTTAAQDRPPATEDPQQRKKHLNVAVAFFGIGI
Ga0210401_109992002	3300020583	Soil	LSDLEFQRELSPEQMREALSLLDSTAETQNQTVQIEDLHPAEEVDPEPDQSSTTMPTQDRPPAAEDPQLHRKHLNLAVAFFGIGIAAAGAL
Ga0210397_110631091	3300021403	Soil	LGSAGDVAMSDLEFQRELSPEQIREALSLLDNTAGTQNQNLRIEDLRPAEEVSPESDHSSTTMAPQDRPPAAEDPQQRKKH
Ga0126371_108289041	3300021560	Tropical Forest Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTMQIEDLRPAEEVNPEPDQSSMTMPTQDRPPAAEDPQLRRKHLNSAVAFFGIGIAAAC
Ga0126371_113755161	3300021560	Tropical Forest Soil	MSDLEFRRELSPEQIREALSLLDSKTDARKHNLRAEDQSPPEEVDLDVDQSSTITASQDRPPAAEDPQQRKKY
Ga0242653_10975661	3300022712	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQLEDLHPAEEVDPEPDQSSTTMPTQDRPPAAEDPQLHRKHLNLAV
Ga0222749_102102531	3300029636	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMATQDRPPGAEDPQQR
Ga0075400_115561521	3300030972	Soil	LSDLEFQRELSPEQMREALSLLDSTGGTQNQTVQIEDLRPAEEVNPEPDQSSTSMPTQDQAPAAEDPQQRRKHLNLAVAFFGIGIAAAG
Ga0318516_102176791	3300031543	Soil	LSDLEFQRELSPEQMREALSLLESSAGTHNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDLQQRKHLNLAVAFFG
Ga0318516_107745091	3300031543	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLAVAFFG
Ga0318534_105293081	3300031544	Soil	LGSPGDAAMSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRK
Ga0318541_105953251	3300031545	Soil	LSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRR
Ga0318538_103711601	3300031546	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPEPDHSSTTMAAQDRPPAAEDPLQRKKHLNLVLA
Ga0318528_104648061	3300031561	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQR
Ga0318573_101709552	3300031564	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFFGIGIVA
Ga0318573_104701741	3300031564	Soil	LRSRGGATLSDLEFQRQLSPEQMREALSLLDSTTRTQNQTVQIEDLRPAEEVNPEPDQSSPTMPMQDRPPAAEDPQQHTKH
Ga0310915_105937561	3300031573	Soil	MREALSLLGTTAGTQNHTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKRLNLAVAF
Ga0318555_107245012	3300031640	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAVAFFGIGIAAAG
Ga0318542_106180511	3300031668	Soil	LSDLEFQRELSPEQMREALSLLESSAGTQNQTVQIEDCVPLNPDQSSTTMPTQDRPPAAK
Ga0318561_105908332	3300031679	Soil	LGSGGDAAMSDLEFQRELSPEQIREALSLLDSMAGAQNQNVGIEDLRPAEGVNPEPDHSSTTMAPQDRPPAAKDPQQRKKHLTL
Ga0318572_102097001	3300031681	Soil	MSDLEFQRELSPEQIREALSLLDSMAGAQNQNVGIEDLRPAEGVNPEPDHSSTTMAPQDRPPAAKDPQQRKKHLTLAAAFVG
Ga0318560_105500341	3300031682	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDSTAGVQNQTVQIEDLRPAEQVNPEPDQSSTTMPMQDRPP
Ga0318496_100963651	3300031713	Soil	MREALSLLDSTVGTQNQTVQIEELRPAEEVNPEPDQSSTTMPTQDWPPAAEDPQQRMKHLNLAVAFFGIGIAAAGALAL
Ga0306917_109695671	3300031719	Soil	MREALSLLDSTAGAQNQTMQIEDLRPAEEVNPEPDQSSTTMPTPDRPPAAEDPQQRRKHLKLAVAFFGIGIAA
Ga0306917_115165751	3300031719	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLAVAFFGIVIAA
Ga0318500_101240221	3300031724	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRK
Ga0306918_101986611	3300031744	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFFGIGIV
Ga0306918_102969891	3300031744	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLA
Ga0306918_110756001	3300031744	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTNQTVQIGDLRPAEEVNPEPDQSSTAMPTQDRPPAAEDPQQRRKHLNLAVAFFGIGIAAAGA
Ga0318509_100649725	3300031768	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLGIG
Ga0318509_104893681	3300031768	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTLQIEDLHPAEEVIPEPDQSSTTMPMQDRPPAAEDPQQRRKHLNLAVA
Ga0318509_105268741	3300031768	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQ
Ga0318526_103246382	3300031769	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLGIG
Ga0318521_107014672	3300031770	Soil	LGSGGDAAMSDLEFQRELSPEQIREALSLLDSMAGAQNQNVGIEDLRPAEGVNPEPDHSSTTMAPQDRPPAAKDPQQRK
Ga0318566_103260881	3300031779	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLG
Ga0318508_10633261	3300031780	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLN
Ga0318508_12522191	3300031780	Soil	LGSAGDAAMSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPEPDHSSTTMAAQDRPPAAEDPLQRKKHLNLVLAYFG
Ga0318547_110797112	3300031781	Soil	MREALSLLDSTAGAQNQTVQTEDLRPPEEVNPEPDHSSTTMPTQDRPPAAEDPQQRRKHLNLAVALFG
Ga0318552_106182162	3300031782	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRKRYLTLAVA
Ga0318548_101310181	3300031793	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLN
Ga0318548_102161301	3300031793	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDLQQR
Ga0318503_102761621	3300031794	Soil	LSDLEFQRELSPEQMREALSLLGTTAGTQNHTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRK
Ga0318557_103592902	3300031795	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAVAFF
Ga0318576_106022221	3300031796	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLGIGMAA
Ga0318523_104341901	3300031798	Soil	LGSPGDAAMSDLEFQRELSPEQIREALSLLDSKTGAQNHNLQVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRKK
Ga0318497_102604702	3300031805	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRK
Ga0318568_100886181	3300031819	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAF
Ga0318568_106573481	3300031819	Soil	LSDLEFQRELSPEQMREALSLLDSMAGAENQTVQIENLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLK
Ga0318567_104934811	3300031821	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDLQQRKHLNLAVAFFG
Ga0318499_104342091	3300031832	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQTEDLRPPEEVNPEPDHSSTTMPTQDRPPAAEDPQQRRKHLN
Ga0318517_105516461	3300031835	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPEPDHSSTTMAAQDRPPAAEDPLQRKKHLNLVLAYFGIA
Ga0318511_102312981	3300031845	Soil	LSDLEFQHELSPEQMREALSLLDSTAGAQNQTVQIEDLRPPEEVNPEPDHSTATMPTQDRPPAAEDPQQRRKHLNSAVAFFGIGIA
Ga0318511_106121052	3300031845	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDSTAGVQNQTVQIEDLRPAEQVNPEPDQSSTTMPMQDRPPAAEGPQQRRKHLNL
Ga0318512_103466471	3300031846	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNSRIENLSPAEEVNPEPDHSSTTMAAQDRPPAAEDPLQRKKHLNLVLAYFGIAIAAAGAV
Ga0318495_101456991	3300031860	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQR
Ga0318544_102014931	3300031880	Soil	LSDLEFQHELSPEQMREALSLLDSTARAQNQTVQIEDLRPPGEVNPEPDHSSATMPTQDRPPAAEDPQQRR
Ga0318536_101227272	3300031893	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLGIG
Ga0318536_105112731	3300031893	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDT
Ga0318522_102185061	3300031894	Soil	LGSPGDAAMSDLEFQRELSPEQIREALSLLDSKTGAQNHNLQVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRKKYLTL
Ga0318522_102818001	3300031894	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKH
Ga0318551_100465191	3300031896	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKH
Ga0318520_102175542	3300031897	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKH
Ga0306923_103153764	3300031910	Soil	MREALSLLGTTAGTQNHTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKRLNLAVAFFGIGIAAAGAL
Ga0306923_104691231	3300031910	Soil	LGSPGDAAMNDLEFQRELSPEQIREALSLLDSKTGAQNHNLQVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRKKYLTLA
Ga0306923_114568491	3300031910	Soil	MREALSLLDSTAGAQNQTVQIEDLRPPEEVNPEPDHSTATMPTQDRPPAAEDPQQRRKHLNSAVAFFG
Ga0306923_115628021	3300031910	Soil	LSDLEFQRELSSEQMREALSLLDGTAGAQNQSVQIEDLGRAEKVKPEPDQCSTTMPTQDRPPAAEDPQQRRKHLNLA
Ga0306921_106337491	3300031912	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNSGIGDSRPAEEVNPEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFLGIGMA
Ga0306921_109473651	3300031912	Soil	LRSAGGATLSDLEFQRELSPEQMREALSLLESSAGTQNQTVQIEDCVPLNPDQSSTTMPTQDRPPAAKDP
Ga0306921_110846511	3300031912	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIGYLRSAEEDNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAVAFFG
Ga0306921_122743781	3300031912	Soil	MREALSLLDNTAGPQNQTAQIEDLRPAKEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAGAFFGIAI
Ga0310912_101552681	3300031941	Soil	MSDLEFQRELSPEQIREALSLLDSMAGAQNQNVGIEDLRPAEGVNPEPDHSSTTMAPQDRPPAAKDPQQRKKHLTLAAAFVGIAIAA
Ga0310912_104809241	3300031941	Soil	LSDLEFQRELSPEQMREALSLLESSAGTQNQTVQIEDCVPLNPDQSSTTMPTQDRPPAAKDPQQRRKHLNLAVAFFGIGI
Ga0310916_115290831	3300031942	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLAVAFFGIVIAAA
Ga0310909_101144253	3300031947	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFFGIGIVAAGALAL
Ga0318530_101804891	3300031959	Soil	LSDLEFQRELSPEQMREALSLLDSTTRTQNQTVQIEGLRPAEEVNPEPDHSSPTMPMQDRPPAAEDPQQHTKHLNLAVAS
Ga0318530_102441221	3300031959	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAV
Ga0306922_109421931	3300032001	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIGYLRSAEEDNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLAV
Ga0306922_120470021	3300032001	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNLAVAFFGIVIAAAG
Ga0318569_102424962	3300032010	Soil	LRSRGGATLSDLEFQRQLSPEQMREALSLLDSTTRTQNQTVQIEDLRPAEEVNPEPDQSSPTMPMQDRPPAAEDPQQHTK
Ga0318549_103434411	3300032041	Soil	LSDLEFQRELSPEQMREALSLLDSTAATQNQTVRIEDLRPAEEVNPELDQSSTTMPTQDRPPAAEDPQQRR
Ga0318556_100361193	3300032043	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAV
Ga0318532_102239531	3300032051	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLN
Ga0318570_101733912	3300032054	Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNL
Ga0318533_107516481	3300032059	Soil	LSDLEFQRELSPEQMREALSLLGSTAGTQNHTVQIEDLHSAEEVNPEPDQSSTTMPTQDRPPAAEDPQQRRKHLNLA
Ga0318504_102642991	3300032063	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDPQ
Ga0318510_104076061	3300032064	Soil	MSDLEFQRELSPEQMREALSLLDRTAGAQDQNLRIENLSPAEEVNPEPDHSSTTMAAQDRPPAAEDPLQRKKHLNLVLAYFGIAIAAAGA
Ga0318513_101002971	3300032065	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDLQQRKHLNLAVA
Ga0318518_102948451	3300032090	Soil	MSDLEFQRELSPEQIREALSLLDSKTGAQNHNLRVEDQSPPEEVDLEVDQSSTITASQDRPPAAEDTQPRKRYLT
Ga0318577_101158411	3300032091	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAVAFFGIGIVAA
Ga0318540_104315161	3300032094	Soil	LSDLEFQRELSPEQMREALSLLESTAGTQNQTVQIEDLRPAEEVNPEPDQSSTTMPTQDRPPAAEDLQQRKHLNLAV
Ga0307472_1006114652	3300032205	Hardwood Forest Soil	MSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIEDLRPAEEVNPEPDHSSTTMAPQDRPPAAEDPQQRKKHLNLAVAFFGVAIAAAGTLALM
Ga0306920_1042711872	3300032261	Soil	LRSAGDATLSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIEDLRPAEDVNPEPDQSNTTIPTQDRPPAAEEPQQRGKHLNLAVAFFGIG
Ga0310914_106637451	3300033289	Soil	LSDLEFQREFSPEQMREALSLLDSTAGAQNQTVQIEDLRLEEVNPKPDQSSTTIPPRDRPPTAEDPQQRRKHLNL
Ga0310914_109521222	3300033289	Soil	LSDLEFQRELSPEQMREALSLLDSTAGTQNQTVQIGYLRSAEEDNPEPDQSSTTMPTQDRPPAAEDPQQRRKNLAVAFFGIGIAAAGA
Ga0318519_102460642	3300033290	Soil	LGSAGEAAMSDLEFQRELSPEQIREALSLLDSTAGAQNQNLRIGDLSPAEEVNLEPDQSSTTMATQDRPPAAEDPQQRKKHLNLAV
Ga0318519_108483271	3300033290	Soil	LRSAGDTTLSDLEFQRELSPEQMREALSLLDNTAGPQNQTAQIEDLRPAKEVNPEPDQSSTGMPTQDRPPAAEDPQQRRKHLNLAGAFFGIAIAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067442

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences