Metagenome Family F067297

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067297
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	43 residues
Representative Sequence	LLVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Number of Associated Samples	73
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.40 %
% of genes from short scaffolds (< 2000 bps)	91.20 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (68.800 % of family members)
Environment Ontology (ENVO)	Unclassified (90.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (68.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.71% β-sheet: 0.00% Coil/Unstructured: 54.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13564	DoxX_2	8.80
PF00196	GerE	4.80
PF03737	RraA-like	3.20
PF00005	ABC_tran	3.20
PF01804	Penicil_amidase	2.40
PF00583	Acetyltransf_1	2.40
PF00239	Resolvase	2.40
PF12704	MacB_PCD	2.40
PF12802	MarR_2	1.60
PF00872	Transposase_mut	1.60
PF13649	Methyltransf_25	1.60
PF01872	RibD_C	1.60
PF13091	PLDc_2	0.80
PF13561	adh_short_C2	0.80
PF03795	YCII	0.80
PF05721	PhyH	0.80
PF02371	Transposase_20	0.80
PF06737	Transglycosylas	0.80
PF02687	FtsX	0.80
PF01548	DEDD_Tnp_IS110	0.80
PF02899	Phage_int_SAM_1	0.80
PF04545	Sigma70_r4	0.80
PF04185	Phosphoesterase	0.80
PF01370	Epimerase	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	3.20
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.40
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.40
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.40
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.60
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.60
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.60
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.80
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.80
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.80
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
All Organisms	root	All Organisms	46.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
cellular organisms	root	All Organisms → cellular organisms	46.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.00 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	3.20 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.40 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.80 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.80 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	3.20 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.80 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.80 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.80 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	3.20 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.80 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.80 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.80 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.80 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	2.40 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.80 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.80 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.80 %
unclassified Actinospica	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica	0.80 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.80 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	2.40 %
Blastococcus sp. TF02A-30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	0.80 %
Frankia sp. AiPs1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. AiPs1	0.80 %
Actinospica sp. MGRD01-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	0.80 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.80 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.80 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300010359\|Ga0126376_11132976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300010361\|Ga0126378_11923625	Not Available	673	Open in IMG/M
3300010361\|Ga0126378_12808982	Not Available	556	Open in IMG/M
3300010361\|Ga0126378_12818205	Not Available	555	Open in IMG/M
3300010362\|Ga0126377_10600168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300010376\|Ga0126381_100694674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1455	Open in IMG/M
3300010376\|Ga0126381_100771950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1378	Open in IMG/M
3300010868\|Ga0124844_1147757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300016270\|Ga0182036_11859914	Not Available	510	Open in IMG/M
3300016294\|Ga0182041_12109884	Not Available	526	Open in IMG/M
3300016294\|Ga0182041_12287652	Not Available	506	Open in IMG/M
3300016357\|Ga0182032_10348143	Not Available	1185	Open in IMG/M
3300016357\|Ga0182032_11579986	Not Available	570	Open in IMG/M
3300016371\|Ga0182034_10169145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300016371\|Ga0182034_10378458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300016387\|Ga0182040_10871410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	745	Open in IMG/M
3300016387\|Ga0182040_11694567	All Organisms → cellular organisms → Bacteria → Terrabacteria group	540	Open in IMG/M
3300016387\|Ga0182040_11940710	Not Available	505	Open in IMG/M
3300016404\|Ga0182037_10694643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	870	Open in IMG/M
3300016422\|Ga0182039_10266435	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1404	Open in IMG/M
3300016445\|Ga0182038_10533293	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018007\|Ga0187805_10320231	Not Available	714	Open in IMG/M
3300018058\|Ga0187766_10033991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2964	Open in IMG/M
3300031544\|Ga0318534_10149089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	1349	Open in IMG/M
3300031544\|Ga0318534_10250394	Not Available	1022	Open in IMG/M
3300031544\|Ga0318534_10285952	Not Available	950	Open in IMG/M
3300031545\|Ga0318541_10254954	Not Available	975	Open in IMG/M
3300031549\|Ga0318571_10362871	Not Available	558	Open in IMG/M
3300031668\|Ga0318542_10308231	Not Available	811	Open in IMG/M
3300031679\|Ga0318561_10286015	Not Available	901	Open in IMG/M
3300031681\|Ga0318572_10490122	Not Available	732	Open in IMG/M
3300031682\|Ga0318560_10018570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3144	Open in IMG/M
3300031682\|Ga0318560_10511312	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300031713\|Ga0318496_10381840	Not Available	778	Open in IMG/M
3300031713\|Ga0318496_10432195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300031719\|Ga0306917_10948635	Not Available	672	Open in IMG/M
3300031719\|Ga0306917_10996991	Not Available	654	Open in IMG/M
3300031719\|Ga0306917_11145965	Not Available	605	Open in IMG/M
3300031724\|Ga0318500_10170241	Not Available	1033	Open in IMG/M
3300031747\|Ga0318502_10971182	Not Available	517	Open in IMG/M
3300031748\|Ga0318492_10054086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1882	Open in IMG/M
3300031748\|Ga0318492_10134019	Not Available	1240	Open in IMG/M
3300031748\|Ga0318492_10257898	Not Available	902	Open in IMG/M
3300031751\|Ga0318494_10137240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1371	Open in IMG/M
3300031751\|Ga0318494_10170469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300031751\|Ga0318494_10266545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	984	Open in IMG/M
3300031751\|Ga0318494_10332275	Not Available	878	Open in IMG/M
3300031764\|Ga0318535_10277741	Not Available	750	Open in IMG/M
3300031769\|Ga0318526_10048011	Not Available	1620	Open in IMG/M
3300031770\|Ga0318521_10162889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. AiPs1	1272	Open in IMG/M
3300031770\|Ga0318521_10500048	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031777\|Ga0318543_10350271	Not Available	661	Open in IMG/M
3300031778\|Ga0318498_10218551	Not Available	862	Open in IMG/M
3300031778\|Ga0318498_10310906	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031779\|Ga0318566_10175052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	1065	Open in IMG/M
3300031781\|Ga0318547_10348914	Not Available	904	Open in IMG/M
3300031781\|Ga0318547_10766220	Not Available	601	Open in IMG/M
3300031782\|Ga0318552_10023722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2749	Open in IMG/M
3300031782\|Ga0318552_10150136	Not Available	1170	Open in IMG/M
3300031782\|Ga0318552_10171087	Not Available	1095	Open in IMG/M
3300031782\|Ga0318552_10658519	Not Available	534	Open in IMG/M
3300031792\|Ga0318529_10389909	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031793\|Ga0318548_10263393	Not Available	847	Open in IMG/M
3300031795\|Ga0318557_10476594	Not Available	573	Open in IMG/M
3300031798\|Ga0318523_10041774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	2124	Open in IMG/M
3300031798\|Ga0318523_10043036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2098	Open in IMG/M
3300031799\|Ga0318565_10350627	Not Available	716	Open in IMG/M
3300031799\|Ga0318565_10364686	Not Available	701	Open in IMG/M
3300031805\|Ga0318497_10092971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1610	Open in IMG/M
3300031805\|Ga0318497_10150413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1274	Open in IMG/M
3300031821\|Ga0318567_10415738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300031832\|Ga0318499_10049950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1562	Open in IMG/M
3300031832\|Ga0318499_10109407	Not Available	1071	Open in IMG/M
3300031832\|Ga0318499_10314214	Not Available	604	Open in IMG/M
3300031832\|Ga0318499_10363285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300031832\|Ga0318499_10397421	Not Available	528	Open in IMG/M
3300031835\|Ga0318517_10114651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1190	Open in IMG/M
3300031890\|Ga0306925_11541050	Not Available	649	Open in IMG/M
3300031893\|Ga0318536_10490710	Not Available	618	Open in IMG/M
3300031894\|Ga0318522_10098297	Not Available	1082	Open in IMG/M
3300031896\|Ga0318551_10273333	Not Available	947	Open in IMG/M
3300031896\|Ga0318551_10298463	Not Available	906	Open in IMG/M
3300031896\|Ga0318551_10422690	Not Available	759	Open in IMG/M
3300031897\|Ga0318520_10143304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300031897\|Ga0318520_10191094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1204	Open in IMG/M
3300031912\|Ga0306921_10267050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2004	Open in IMG/M
3300031946\|Ga0310910_10078644	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300031947\|Ga0310909_10887743	Not Available	733	Open in IMG/M
3300031954\|Ga0306926_11016668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	985	Open in IMG/M
3300031954\|Ga0306926_11486585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300032001\|Ga0306922_10487754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1314	Open in IMG/M
3300032001\|Ga0306922_11022306	Not Available	851	Open in IMG/M
3300032008\|Ga0318562_10155887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1315	Open in IMG/M
3300032009\|Ga0318563_10668239	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300032010\|Ga0318569_10169466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300032010\|Ga0318569_10224062	Not Available	872	Open in IMG/M
3300032010\|Ga0318569_10382788	Not Available	656	Open in IMG/M
3300032025\|Ga0318507_10003577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4426	Open in IMG/M
3300032039\|Ga0318559_10428527	Not Available	617	Open in IMG/M
3300032043\|Ga0318556_10074858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300032043\|Ga0318556_10223880	Not Available	980	Open in IMG/M
3300032043\|Ga0318556_10536404	Not Available	611	Open in IMG/M
3300032054\|Ga0318570_10124494	Not Available	1141	Open in IMG/M
3300032054\|Ga0318570_10221348	Not Available	857	Open in IMG/M
3300032054\|Ga0318570_10281213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	756	Open in IMG/M
3300032054\|Ga0318570_10298424	Not Available	732	Open in IMG/M
3300032055\|Ga0318575_10220727	Not Available	954	Open in IMG/M
3300032063\|Ga0318504_10264755	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032063\|Ga0318504_10562916	Not Available	547	Open in IMG/M
3300032064\|Ga0318510_10222990	Not Available	768	Open in IMG/M
3300032064\|Ga0318510_10551036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300032065\|Ga0318513_10042747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2005	Open in IMG/M
3300032068\|Ga0318553_10173302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	1122	Open in IMG/M
3300032068\|Ga0318553_10586849	Not Available	584	Open in IMG/M
3300032076\|Ga0306924_10659400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1179	Open in IMG/M
3300032076\|Ga0306924_11539999	Not Available	703	Open in IMG/M
3300032089\|Ga0318525_10636569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032090\|Ga0318518_10200544	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300032090\|Ga0318518_10616061	Not Available	553	Open in IMG/M
3300032261\|Ga0306920_100467334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1874	Open in IMG/M
3300032261\|Ga0306920_101238166	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300032261\|Ga0306920_104070446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300033289\|Ga0310914_10567596	Not Available	1024	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.20%
Aquatic	Environmental → Aquatic	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.20%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Loam	Environmental → Terrestrial → Soil → Loam	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	90.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	68.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0126376_111329762	3300010359	Tropical Forest Soil	AAGTGGTSLFHVFGYVGLFFSLVLILRVTIAITCEGI*
Ga0126378_119236251	3300010361	Tropical Forest Soil	TGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI*
Ga0126378_128089821	3300010361	Tropical Forest Soil	PAAAGTGGTSLFRAFGYAVLFLSLVWIPRVIIAITREGI*
Ga0126378_128182051	3300010361	Tropical Forest Soil	VPVAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGV*
Ga0126377_106001681	3300010362	Tropical Forest Soil	PLLVPTAAGTGGTSLFHVFGHVGLFFSLVLILLVIIAITREGI*
Ga0126381_1006946743	3300010376	Tropical Forest Soil	GVRGGPLLAPAAAGTGGTSLFHVFGYVGLFFSLVLILRVILAITRDGT*
Ga0126381_1007719503	3300010376	Tropical Forest Soil	GTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGT*
Ga0126381_1044071781	3300010376	Tropical Forest Soil	IREGPVLIPGAAAGIRTTIFQAFGYLGLFFSLVLILRVIITIIREGIT*
Ga0124844_11477571	3300010868	Tropical Forest Soil	GGPLLVPTTAGTGGTSLFHVFGYVGLFFSLVLILRVVIAITREGI*
Ga0137371_101076293	3300012356	Vadose Zone Soil	LLAIRGGPALIPGAAPGSGTSVFRLFGYLGLFFSVVLILRVVIAIAREGISP*
Ga0182036_118599141	3300016270	Soil	IGVRGGPLLLPTAAGTGGTSLFHVFGYVSLVLILRVIIAITRDGI
Ga0182041_121098841	3300016294	Soil	SAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0182041_122876521	3300016294	Soil	GPLLVPPAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0182032_103481431	3300016357	Soil	GTGGTSLFRVFGYVGLFFSLVLILRVIIAITRDGI
Ga0182032_115799861	3300016357	Soil	LLLPAAAGTGGTSLFHVFGYAGLFFSLVLTLRVIIAITREGI
Ga0182034_101691452	3300016371	Soil	PLFLPTAARVGGTSLFHMFGYVGLFFSLVLILRVIIAITREGI
Ga0182034_103784581	3300016371	Soil	APAAAGTGGTSLFHAFGYVGLFFSLVLILRVIITITRDGT
Ga0182040_108714102	3300016387	Soil	GVHGGPLFRPSAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0182040_116945672	3300016387	Soil	LLAPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0182040_119407101	3300016387	Soil	GGPLFRPSAAGTGGTSLFHVFGYTLLFLSLVLILRVIIAITHEGI
Ga0182037_106946431	3300016404	Soil	PAAAGTGGTSLFHAFGYVGLFFSLVLILRVIIAITREGI
Ga0182039_102664351	3300016422	Soil	VRGGPLFLPAASGTGGTSLFHVFGYVGLFFSLVLILRVIITITRDGI
Ga0182038_105332932	3300016445	Soil	PLLAPAAAGTGGTSLFHALGYIGLFLSLVLILRVIIAITRDGT
Ga0187805_103202311	3300018007	Freshwater Sediment	GVRGGPLLIPAAAGTGGTSLFHAFGYAGLFFSLVLTLRVIIAITRDGI
Ga0187766_100339912	3300018058	Tropical Peatland	PAGAGTGGTSLFHVLGYIGLFLSLVLTLRVIIAITREGI
Ga0318534_101490892	3300031544	Soil	LICARGGPLLVPPAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRQGI
Ga0318534_102503941	3300031544	Soil	FLPTATDTGGTSLFHVFGYVGLLFSLVLILRVIIAITREGI
Ga0318534_102859521	3300031544	Soil	ACGGPLLLPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0318541_102549542	3300031545	Soil	RGGPLLVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318571_103628711	3300031549	Soil	AAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318542_103082312	3300031668	Soil	SVMLIGVRGGPLFVPAGAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318561_102860151	3300031679	Soil	LPAAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGI
Ga0318572_104901221	3300031681	Soil	VRGGPLLVPAAAGIGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318560_100185703	3300031682	Soil	VPAAAGTGGTSLFHALGYIGLFLSLVLILRVIIAITRDGT
Ga0318560_105113121	3300031682	Soil	LRGGPLFLPTAAGTGGTSLFHVFGYAGLFLSLVLILRVIIAITRDGI
Ga0318496_103818401	3300031713	Soil	LLPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0318496_104321952	3300031713	Soil	IGVRGGPLLVPAAAGSGGTSLFHAFGYVGLFFSLVLILRVIIAITREGI
Ga0306917_109486351	3300031719	Soil	LLLPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0306917_109969911	3300031719	Soil	LFFPAAAGTGGTSLFHLFGYVGLFLSLVLILRVIIAITREAI
Ga0306917_111459651	3300031719	Soil	AAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0318500_101702412	3300031724	Soil	PTAAGTGGTSLFHVFGYAGLFLSLVLILRVIIAITRDGI
Ga0318502_109711821	3300031747	Soil	GPLLAPAAAGTGGTSLFHAVGYVGLFFSLVLILRVIITITRDGI
Ga0318492_100540861	3300031748	Soil	GPLLMPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318492_101340193	3300031748	Soil	LAPAAAGTGGTSLFHAFGYVGLFFSLVLILRVIITITRDGI
Ga0318492_102578982	3300031748	Soil	SVMLIGARGGPLLVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318494_101372403	3300031751	Soil	LLAPAAAGTGGTSLFHAFGYVGLFLSLVLILRVIITITRDGI
Ga0318494_101704694	3300031751	Soil	GVRGGPLLVPAAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGI
Ga0318494_102665453	3300031751	Soil	RGGPLLTPAAAGTGGTSLFHVLGYVGLFLGLVLILRVIIAITRDGT
Ga0318494_103322751	3300031751	Soil	PAAAGIGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318535_102777411	3300031764	Soil	IGVRGGPLLVPTAAGTGGTSLFHVFGYVGLFLSLVLILRVIVAITRDGI
Ga0318526_100480111	3300031769	Soil	FRPSAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318521_101628891	3300031770	Soil	MLIGVRGGPLLVPAAAGTGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318521_105000481	3300031770	Soil	ARRGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318543_103502712	3300031777	Soil	AAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318498_102185511	3300031778	Soil	IGVRGGPLLVPAAAGIGGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318498_103109061	3300031778	Soil	VPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318566_101750522	3300031779	Soil	VMLIGARSGPLLVPPAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318547_103489141	3300031781	Soil	VHGGPLFLPTAADTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318547_107662202	3300031781	Soil	PLVRPRAAGTAGTSLYHVFGYTGLFFSLVLILRVIIAITREGI
Ga0318552_100237221	3300031782	Soil	GTGGTSLFHALGYIGLFLSLVLILRVIIAITRDGT
Ga0318552_101501361	3300031782	Soil	PLLLPAAAGTGGTSLFHVFGYAGLFFSLVLTLRVIIAITREGI
Ga0318552_101710872	3300031782	Soil	FLPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318552_106585191	3300031782	Soil	AGTGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318529_103899092	3300031792	Soil	GEQRAGTGGTSLFHALGYIGLFLSLVLILRVIIAITRDGT
Ga0318548_102633931	3300031793	Soil	IGVRGGPLLVPAAAGIGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318557_104765941	3300031795	Soil	VMLIGVRGGPLFVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318523_100417743	3300031798	Soil	PAAAGTGGTSLFHALGYIGLFLSLVLILRVIIAITRDGT
Ga0318523_100430363	3300031798	Soil	IGVRGGPLFLPAASGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318565_103506271	3300031799	Soil	AAAGTGGTSLFHLFGYVGLFLSLVLILRVIIAITREGI
Ga0318565_103646861	3300031799	Soil	DTGGTSLFHVFGYVGLLFSLVLILRVIIAITREGI
Ga0318497_100929711	3300031805	Soil	AGPLFVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318497_101504133	3300031805	Soil	ACAGPLLVPAGAGTAGTSLFHMFGYIGLFFSLVLILRVIIAITRDGI
Ga0318567_104157382	3300031821	Soil	VEQRRAGAGTAGTSLFHMFGYIGLFFSLVLILRVIIAITRDGI
Ga0318499_100499501	3300031832	Soil	PLFVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318499_101094071	3300031832	Soil	LIGVRGGPLLLPAAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318499_103142141	3300031832	Soil	RPPCAGTSLFHMFGYIGLFFSLVLILRVIIAITRDGI
Ga0318499_103632851	3300031832	Soil	AGDELPVAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318499_103974211	3300031832	Soil	LMPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318517_101146512	3300031835	Soil	LVPAAAGIGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0306925_115410501	3300031890	Soil	TAAGTGGTSLFHVFGYVSLFFSLVLILRVIIAITRDGI
Ga0318536_104907102	3300031893	Soil	GTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318522_100982972	3300031894	Soil	FVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318551_102733331	3300031896	Soil	PVPAPAAAGTGGTSLFHAFGYAGLFVSLVLTLRVIIAITRDGT
Ga0318551_102984631	3300031896	Soil	GGPLLVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318551_104226901	3300031896	Soil	VPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGT
Ga0318520_101433041	3300031897	Soil	TPAAAGTGGTSLFHVLGYVGLFLGLVLILRVIIAITRDGT
Ga0318520_101910941	3300031897	Soil	GPLLVPTAAGIGGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0306921_102670501	3300031912	Soil	GIGGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0310910_100786441	3300031946	Soil	LLLPAAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGI
Ga0310909_108877431	3300031947	Soil	PAAAGTGGTSLFHAFGYAGLFLSLVLTLRVIIAITRDGT
Ga0306926_110166681	3300031954	Soil	AGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0306926_114865851	3300031954	Soil	LLVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0306922_104877541	3300032001	Soil	PLLVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGT
Ga0306922_110223061	3300032001	Soil	TAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318562_101558872	3300032008	Soil	LTPAAAGTGGTSLFHVLGYVGLFLGLVLILRVIIAITRDGI
Ga0318563_106682391	3300032009	Soil	PLLAPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318569_101694661	3300032010	Soil	GPLVLPTAAGTGGTSLFHVFGYVGLFLSLVLILRVIIAITREGI
Ga0318569_102240622	3300032010	Soil	LFLPTAAGTGGTSLFHVFGYAGLFLSLVLILRVIIAITRDGI
Ga0318569_103827882	3300032010	Soil	PLFLPTATDTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318507_100035774	3300032025	Soil	IGVRGGPLLAPAAAGTGGTSLFHAFGYVGLFFSLVLILRVIITITRDGT
Ga0318559_104285272	3300032039	Soil	MLIGVRGGPLFLPAAAGTAGTSLFHVFGYAGLFVSLVLILRVIIAITRDGI
Ga0318556_100748581	3300032043	Soil	GGPLFVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318556_102238802	3300032043	Soil	AAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGI
Ga0318556_105364041	3300032043	Soil	EQRAAAAGAGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318570_101244942	3300032054	Soil	ADTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318570_102213482	3300032054	Soil	LFLPAAAGTAGTSLFHVFGYAGLFVSLVLILRVIIAITRDGI
Ga0318570_102812131	3300032054	Soil	SVMLIGVRGGPLFLPAASGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318570_102984241	3300032054	Soil	GVRGGPLFLPTASGTGGTSLFHVFGYAGLFFSLVLILRVIITITRDGI
Ga0318575_102207272	3300032055	Soil	VPPVPAAAGTGGTSLYHAFGYVGQFFSQVLIQRVIITITRDGI
Ga0318504_102647551	3300032063	Soil	VEQRRAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318504_105629162	3300032063	Soil	LLPAAAGTGGTSLFHVFGYAGLFFSLVLILRVIIAITREGI
Ga0318510_102229901	3300032064	Soil	FRPSAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGT
Ga0318510_105510362	3300032064	Soil	AGSGGTSLFHAFGYVGLFFSLVLILRVIIAITREGI
Ga0318513_100427472	3300032065	Soil	GPLLVPSAAGIGGTSLFHVFGYAGLFFSLVLILRVIIAITRESI
Ga0318553_101733022	3300032068	Soil	LLIGARGGPLLAPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318553_105868492	3300032068	Soil	GVRGGSLFLPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0306924_106594001	3300032076	Soil	GGPLFLPTASGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0306924_115399991	3300032076	Soil	GTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0318525_106365691	3300032089	Soil	VRGGPLLVPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318518_102005441	3300032090	Soil	RGGPLLTPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0318518_106160611	3300032090	Soil	AGAGTAGTSLFHMFGYIGLFFSLVLILRVIIAITRDGI
Ga0306920_1004673345	3300032261	Soil	LIGVRGGPLLVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI
Ga0306920_1012381662	3300032261	Soil	GPLLAPAAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITRDGI
Ga0306920_1040704462	3300032261	Soil	RGGPLLVPAAAGTGGTSLFHVFGYVGLFLSLVLILRVIIAITREGI
Ga0310914_105675961	3300033289	Soil	MLIGVRGGPLFVPTAAGTGGTSLFHVFGYVGLFFSLVLILRVIIAITREGI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences