NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F067241

Metagenome Family F067241

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067241
Family Type Metagenome
Number of Sequences 126
Average Sequence Length 75 residues
Representative Sequence MSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRDVFRQIRESRR
Number of Associated Samples 99
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.76 %
% of genes near scaffold ends (potentially truncated) 14.29 %
% of genes from short scaffolds (< 2000 bps) 70.63 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.238 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(20.635 % of family members)
Environment Ontology (ENVO) Unclassified
(35.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.825 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.73%    β-sheet: 0.00%    Coil/Unstructured: 43.27%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF05016ParE_toxin 33.33
PF02784Orn_Arg_deC_N 2.38
PF04255DUF433 1.59
PF13483Lactamase_B_3 1.59
PF00754F5_F8_type_C 1.59
PF02498Bro-N 1.59
PF01610DDE_Tnp_ISL3 1.59
PF00278Orn_DAP_Arg_deC 1.59
PF00072Response_reg 0.79
PF02627CMD 0.79
PF06736TMEM175 0.79
PF15919HicB_lk_antitox 0.79
PF00535Glycos_transf_2 0.79
PF13559DUF4129 0.79
PF01702TGT 0.79
PF03629SASA 0.79
PF01351RNase_HII 0.79
PF01565FAD_binding_4 0.79
PF00528BPD_transp_1 0.79
PF01467CTP_transf_like 0.79
PF00215OMPdecase 0.79
PF06574FAD_syn 0.79
PF09848DUF2075 0.79
PF04371PAD_porph 0.79
PF09935DUF2167 0.79
PF07589PEP-CTERM 0.79
PF02452PemK_toxin 0.79
PF13560HTH_31 0.79
PF12681Glyoxalase_2 0.79
PF13520AA_permease_2 0.79
PF12161HsdM_N 0.79
PF03929PepSY_TM 0.79
PF02896PEP-utilizers_C 0.79
PF07726AAA_3 0.79
PF00329Complex1_30kDa 0.79
PF07927HicA_toxin 0.79
PF07971Glyco_hydro_92 0.79
PF01230HIT 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 3.97
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 3.97
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 1.59
COG3464TransposaseMobilome: prophages, transposons [X] 1.59
COG3617Prophage antirepressorMobilome: prophages, transposons [X] 1.59
COG0164Ribonuclease HIIReplication, recombination and repair [L] 0.79
COG0196FAD synthaseCoenzyme transport and metabolism [H] 0.79
COG0343Queuine/archaeosine tRNA-ribosyltransferaseTranslation, ribosomal structure and biogenesis [J] 0.79
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.79
COG0852NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)Energy production and conversion [C] 0.79
COG1039Ribonuclease HIIIReplication, recombination and repair [L] 0.79
COG1549Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domainsTranslation, ribosomal structure and biogenesis [J] 0.79
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.79
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.79
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.79
COG2957Agmatine/peptidylarginine deiminaseAmino acid transport and metabolism [E] 0.79
COG3182PepSY-associated TM regionFunction unknown [S] 0.79
COG3262Ni,Fe-hydrogenase III component GEnergy production and conversion [C] 0.79
COG3295Uncharacterized conserved proteinFunction unknown [S] 0.79
COG3537Putative alpha-1,2-mannosidaseCarbohydrate transport and metabolism [G] 0.79
COG3548Uncharacterized membrane proteinFunction unknown [S] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.24 %
UnclassifiedrootN/A4.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918006|ConsensusfromContig28164All Organisms → cellular organisms → Bacteria → PVC group753Open in IMG/M
3300001398|JGI20207J14881_1001513All Organisms → cellular organisms → Bacteria7970Open in IMG/M
3300001605|Draft_10102352All Organisms → cellular organisms → Bacteria → PVC group2086Open in IMG/M
3300002515|JGI24144J35610_10012942All Organisms → cellular organisms → Bacteria2473Open in IMG/M
3300002569|JGI24136J36422_10130049All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300002569|JGI24136J36422_10130319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria661Open in IMG/M
3300005549|Ga0070704_100531329All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300005614|Ga0068856_101898893All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia606Open in IMG/M
3300005829|Ga0074479_10603659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1143Open in IMG/M
3300005938|Ga0066795_10189578All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300006055|Ga0097691_1022359All Organisms → cellular organisms → Bacteria2690Open in IMG/M
3300006638|Ga0075522_10000355All Organisms → cellular organisms → Bacteria32881Open in IMG/M
3300006638|Ga0075522_10009798All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae6427Open in IMG/M
3300006638|Ga0075522_10116795All Organisms → cellular organisms → Bacteria → PVC group1424Open in IMG/M
3300006795|Ga0075520_1128554All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300006864|Ga0066797_1000568All Organisms → cellular organisms → Bacteria → Proteobacteria10972Open in IMG/M
3300006864|Ga0066797_1067843All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300006950|Ga0075524_10133221All Organisms → cellular organisms → Bacteria → PVC group1073Open in IMG/M
3300009093|Ga0105240_10855946All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia981Open in IMG/M
3300009163|Ga0114970_10116885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1635Open in IMG/M
3300009175|Ga0073936_10001188All Organisms → cellular organisms → Bacteria40489Open in IMG/M
3300009176|Ga0105242_10209112All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1738Open in IMG/M
3300009183|Ga0114974_10173570Not Available1333Open in IMG/M
3300009185|Ga0114971_10031812All Organisms → cellular organisms → Bacteria3376Open in IMG/M
3300009185|Ga0114971_10630172Not Available591Open in IMG/M
3300009187|Ga0114972_10518517All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes673Open in IMG/M
3300009502|Ga0114951_10049112All Organisms → cellular organisms → Bacteria2558Open in IMG/M
3300009661|Ga0105858_1278240All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300009678|Ga0105252_10567214All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia524Open in IMG/M
3300010341|Ga0074045_10031177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales4024Open in IMG/M
3300010885|Ga0133913_13040070All Organisms → cellular organisms → Bacteria → PVC group1117Open in IMG/M
3300012469|Ga0150984_119472493All Organisms → cellular organisms → Bacteria → PVC group519Open in IMG/M
3300012929|Ga0137404_11136761All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia717Open in IMG/M
3300013006|Ga0164294_10387645All Organisms → cellular organisms → Bacteria959Open in IMG/M
(restricted) 3300013126|Ga0172367_10063175All Organisms → cellular organisms → Bacteria2823Open in IMG/M
3300014168|Ga0181534_10005367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula7260Open in IMG/M
3300014199|Ga0181535_10330141All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300014200|Ga0181526_10264888All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1095Open in IMG/M
3300014201|Ga0181537_10456705All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia875Open in IMG/M
3300014201|Ga0181537_10604413All Organisms → cellular organisms → Bacteria → PVC group748Open in IMG/M
3300014201|Ga0181537_10975763All Organisms → cellular organisms → Bacteria → PVC group573Open in IMG/M
3300014490|Ga0182010_10164471All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300014490|Ga0182010_10555217All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia639Open in IMG/M
3300014491|Ga0182014_10062536All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2454Open in IMG/M
3300014494|Ga0182017_10092346All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1986Open in IMG/M
3300014494|Ga0182017_10671238All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia629Open in IMG/M
3300014496|Ga0182011_10166992All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300014498|Ga0182019_10247185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1172Open in IMG/M
3300014499|Ga0182012_10000737All Organisms → cellular organisms → Bacteria35991Open in IMG/M
3300014499|Ga0182012_10470635All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia820Open in IMG/M
3300014502|Ga0182021_10287947All Organisms → cellular organisms → Bacteria1932Open in IMG/M
3300014502|Ga0182021_11660280All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia769Open in IMG/M
3300014502|Ga0182021_12123387All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia676Open in IMG/M
3300014655|Ga0181516_10064546Not Available1846Open in IMG/M
3300014839|Ga0182027_10030218All Organisms → cellular organisms → Bacteria7056Open in IMG/M
3300014839|Ga0182027_10380795All Organisms → cellular organisms → Bacteria1573Open in IMG/M
3300014839|Ga0182027_11329528All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia715Open in IMG/M
3300014969|Ga0157376_11260724All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia768Open in IMG/M
3300015264|Ga0137403_10269422All Organisms → cellular organisms → Bacteria1607Open in IMG/M
3300015264|Ga0137403_10841831Not Available770Open in IMG/M
3300017931|Ga0187877_1389887All Organisms → cellular organisms → Bacteria → PVC group526Open in IMG/M
3300017988|Ga0181520_10122291All Organisms → cellular organisms → Bacteria2173Open in IMG/M
3300018033|Ga0187867_10580986All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300021075|Ga0194063_10003362All Organisms → cellular organisms → Bacteria9578Open in IMG/M
3300021406|Ga0210386_10320702All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1330Open in IMG/M
3300021475|Ga0210392_11135861All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia585Open in IMG/M
3300022555|Ga0212088_10002290All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia40463Open in IMG/M
3300022555|Ga0212088_10048077All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula4640Open in IMG/M
3300023088|Ga0224555_1011299All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula5428Open in IMG/M
3300023091|Ga0224559_1261564All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia582Open in IMG/M
3300023097|Ga0247757_10056150All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300023184|Ga0214919_10030937All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin1185581Open in IMG/M
3300024186|Ga0247688_1000009All Organisms → cellular organisms → Bacteria208146Open in IMG/M
3300024288|Ga0179589_10196073All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia881Open in IMG/M
3300024288|Ga0179589_10261915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia770Open in IMG/M
3300025481|Ga0208079_1001261All Organisms → cellular organisms → Bacteria13381Open in IMG/M
3300025495|Ga0207932_1003511All Organisms → cellular organisms → Bacteria5249Open in IMG/M
3300025499|Ga0207931_1062684All Organisms → cellular organisms → Bacteria → PVC group723Open in IMG/M
3300025533|Ga0208584_1087527All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia759Open in IMG/M
3300025548|Ga0208716_1017601All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300025650|Ga0209385_1008049All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales4449Open in IMG/M
3300025664|Ga0208849_1002962All Organisms → cellular organisms → Bacteria8697Open in IMG/M
3300025679|Ga0207933_1000011All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia199530Open in IMG/M
3300025703|Ga0208357_1031875All Organisms → cellular organisms → Bacteria1862Open in IMG/M
3300025716|Ga0209746_1001063All Organisms → cellular organisms → Bacteria13495Open in IMG/M
3300025716|Ga0209746_1183158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia568Open in IMG/M
3300025862|Ga0209483_1000433All Organisms → cellular organisms → Bacteria36984Open in IMG/M
3300025865|Ga0209226_10020813All Organisms → cellular organisms → Bacteria2905Open in IMG/M
3300025865|Ga0209226_10068150All Organisms → cellular organisms → Bacteria1623Open in IMG/M
3300025888|Ga0209540_10225375All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300025888|Ga0209540_10618225All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia544Open in IMG/M
3300025913|Ga0207695_10183419All Organisms → cellular organisms → Bacteria2013Open in IMG/M
3300025928|Ga0207700_10705336All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300026273|Ga0209881_1104839Not Available704Open in IMG/M
(restricted) 3300027728|Ga0247836_1007403All Organisms → cellular organisms → Bacteria11639Open in IMG/M
(restricted) 3300027728|Ga0247836_1018271All Organisms → cellular organisms → Bacteria5441Open in IMG/M
3300028556|Ga0265337_1219129All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia517Open in IMG/M
3300028653|Ga0265323_10138352All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300028653|Ga0265323_10251893All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia549Open in IMG/M
3300028779|Ga0302266_10140750All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium951Open in IMG/M
3300028800|Ga0265338_10186664All Organisms → cellular organisms → Bacteria → PVC group1575Open in IMG/M
3300028800|Ga0265338_10304180All Organisms → cellular organisms → Bacteria → PVC group1158Open in IMG/M
3300028866|Ga0302278_10205488Not Available975Open in IMG/M
3300029911|Ga0311361_10445516All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300029939|Ga0311328_10854135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia603Open in IMG/M
3300029990|Ga0311336_11074193All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia700Open in IMG/M
3300030000|Ga0311337_11667828All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia559Open in IMG/M
3300031231|Ga0170824_106978335All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia537Open in IMG/M
3300031232|Ga0302323_101918079All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium672Open in IMG/M
3300031258|Ga0302318_10481487All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia629Open in IMG/M
3300031344|Ga0265316_10854733All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia637Open in IMG/M
3300031521|Ga0311364_11210915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia750Open in IMG/M
3300031521|Ga0311364_12372127All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300031525|Ga0302326_12718615All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300031616|Ga0307508_10350430All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula1068Open in IMG/M
3300031759|Ga0316219_1322256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia525Open in IMG/M
3300031813|Ga0316217_10003770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia16913Open in IMG/M
3300031813|Ga0316217_10012320All Organisms → cellular organisms → Bacteria7074Open in IMG/M
3300031813|Ga0316217_10257409All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia691Open in IMG/M
3300031902|Ga0302322_100809812All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300032164|Ga0315283_10115291All Organisms → cellular organisms → Bacteria2831Open in IMG/M
3300032164|Ga0315283_12186833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia545Open in IMG/M
3300032275|Ga0315270_11187472All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300033798|Ga0334821_127508All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia506Open in IMG/M
3300034107|Ga0335037_0144507All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300034357|Ga0335064_0620898All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia677Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil20.63%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen9.52%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog6.35%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.56%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake4.76%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen4.76%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere4.76%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.97%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.97%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater3.17%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil3.17%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion2.38%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.38%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.38%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.59%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.79%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.79%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.79%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.79%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.79%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.79%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.79%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.79%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.79%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.79%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918006Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1EnvironmentalOpen in IMG/M
3300001398Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012EnvironmentalOpen in IMG/M
3300001605Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling BasinEngineeredOpen in IMG/M
3300002515Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21AEnvironmentalOpen in IMG/M
3300002569Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006950Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-oneEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009661Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300021075Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20mEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300023091Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34EnvironmentalOpen in IMG/M
3300023097Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025499Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025650Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025679Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025703Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025716Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025865Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026273Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300028556Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaGHost-AssociatedOpen in IMG/M
3300028653Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaGHost-AssociatedOpen in IMG/M
3300028779Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031813Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoAEnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300033798Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-SEnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034357Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
P1_C_001533702140918006SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGAPTPAERQALDEALADFERDPSPGEPWRKVFSKIRASRR
JGI20207J14881_100151333300001398Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRKVFSEIRKPR*
Draft_1010235243300001605Hydrocarbon Resource EnvironmentsMSKAQILEELPRLTASDRSQLFARLAEIHEADLLEGIAPTPAERQALDEALAEFERDPSPGEPWREVFRQLRKTSQ*
JGI24144J35610_1001294233300002515Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPSPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR*
JGI24136J36422_1013004923300002569Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPW
JGI24136J36422_1013031913300002569Arctic Peat SoilAMSKSQILEELPRLTANDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFSKIRASRR*
Ga0070704_10053132913300005549Corn, Switchgrass And Miscanthus RhizosphereEILAELPKLTASERSQLFARLAELHEIDLISGDEPSLGERQALDAALAEFERDRNPGEPWRDVLHQIRRSRK*
Ga0068856_10189889323300005614Corn RhizosphereMSKAQILEELPKLSVSDRSQIFARLAELHEADLLAGGSPAPAEQQALDEALTGFERDPSPGDPWRNVFREIRAARI*
Ga0074479_1060365923300005829Sediment (Intertidal)MSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGCSPTPAERQALDDALAEFERDPSPGQPWREVFREIRESRR*
Ga0066795_1018957823300005938SoilMSKSQILEELPRLTANDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFSKIRASRR*
Ga0097691_102235933300006055Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFVRLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRHVFRQIRESRR*
Ga0075522_1000035593300006638Arctic Peat SoilMSKSQILEELPRLTADDRSQLFARIAELHEADLLDGSAPTPAERQALDEALAEFERDPSPGEPWHKVFSEIRASRR*
Ga0075522_1000979893300006638Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRNVFSEIRKSR*
Ga0075522_1011679543300006638Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRNVFSEIRKAR*
Ga0075520_112855423300006795Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRNVFRQIRESRR*
Ga0066797_100056893300006864SoilMSKAQILEELPKLSVSDRSQLFARLAELHEADLLAGGSPTPAERQALDEALADFERDPSPGEPWRNVFREIRASRR*
Ga0066797_106784323300006864SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGAAPTPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR*
Ga0075524_1013322133300006950Arctic Peat SoilMSKSQILEELPRLTANDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFQQIRASRR*
Ga0105240_1085594633300009093Corn RhizosphereMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGAPSPAERQALDAAFAEFERDPGPGRPWREVFSQIRASRR*
Ga0114970_1011688513300009163Freshwater LakeMSKAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFEEFERNPSPGEPWRDVFLHLRQSRR*
Ga0073936_1000118823300009175Freshwater Lake HypolimnionMSKAQILEELPKLTAGDRSQLFARLAEIHETDLLDGDAPSPAERRALDEAFAEFERDSSPGEPWRDVFLQLRQARR*
Ga0105242_1020911233300009176Miscanthus RhizosphereMSKAQILEELPKLTVSERSQLFARLAELHEADLVESSIVPSAEREVLDEALAEFERDPSPGQPWREVFREIRKPQ*
Ga0114974_1017357013300009183Freshwater LakeMSKAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFKEFERDPSPGEPWRDVFLHLRQSRR*
Ga0114971_1003181223300009185Freshwater LakeTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFEEFERDPSPGEPWRDVFLHLRQSRR*
Ga0114971_1063017213300009185Freshwater LakeMSKAQILEELPKLTASDRSQVFARLAEIHETEMLDADAPLPSEKQALDEAFAEFERDPRPGEPWRDVILHLRQSR*
Ga0114972_1051851713300009187Freshwater LakeMSSAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFEEFERNPSPGE
Ga0114951_1004911213300009502FreshwaterMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGAPTPVERLALDEMLAEFERDPSPGEPWRVVFRQIRASRR*
Ga0105858_127824013300009661Permafrost SoilMSKAQILEELPKLTVSDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKAFSEIRASRR*
Ga0105252_1056721413300009678SoilMSKAQILEELPKLSVSDRSQLFARLAELHEADLLDSGAPTPAERQALDEALDEFAQDRSPGEPWRDVFRQIRESRQ*
Ga0074045_1003117763300010341Bog Forest SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGAPTPAERQALDEALAEFERDPSPGEPWRNVFRQIRESRR*
Ga0133913_1304007033300010885Freshwater LakeMSKAQILEELPKLTASDRSQVFAWLAEIHETDLLDADAPSPSERQALDEAFAEFERDPSLGEPWRDVFLHLRQSR*
Ga0150984_11947249323300012469Avena Fatua RhizosphereLEELPKLTPRERSQLFARLAELHEADLVGEDGPTTSERQALDEALAEFERDGDPGKPWRDVLRELRTSRS*
Ga0137404_1113676123300012929Vadose Zone SoilMSKAQILGELPKLSVNDRSQLFARLAELHEADLLAGGSTTPAERQALDEVLADFERDPSLGEPWRNVFREIRASRR*
Ga0164294_1038764523300013006FreshwaterMSKAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSEKQALEEAFAEFERDPSPGESWRDIFLQLRQPR*
(restricted) Ga0172367_1006317543300013126FreshwaterMSKAQILEELPKLTPRDRSQVFAKLAEIHETDLLLAEAPSPSERLALDEAFAEFERDPSPGEPWRDVFLQLRQTSR*
Ga0181534_10005367113300014168BogMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRKVFSEIRASRR*
Ga0181535_1033014123300014199BogMSKAQIFEELPKLSASDRSQLFARLAELQETDLLDGSSPLPAERQALDEALAEFERDPNPGEPWRKVIRQIRERR*
Ga0181526_1026488823300014200BogMSKVEILDELPRLTARDRSQLFARLAELHEADLITGDEPSPAERQTLDAALAEFERDRNPGQPWRDVLRQVRQASR*
Ga0181537_1045670513300014201BogKLTVSYRSQLFARLAELHEADLLDSSAPTAAERQALDEAFAEFERDASPGEPWRKVLSEIRASRR*
Ga0181537_1060441323300014201BogMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGAPTAAERQALDEALTEFERDPSPGEPWRKVFSEIRASRR*
Ga0181537_1097576323300014201BogMSKSQILEELPRLTADDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFSELRKPR*
Ga0182010_1016447133300014490FenMSKAQILEELPRLTVGDRSQLFARLAELHEADLLDGGSPSPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR*
Ga0182010_1055521733300014490FenLEEPPRLTVSDCSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSLGEPWRDVFRQIRESRR*
Ga0182014_1006253623300014491BogMSKAQIFEELPKLSASDRSQLFARLAELQETDLLDGSSPLPAERQALDEALAEFERDPNPGEPWRKVIRQIRARR*
Ga0182017_1009234623300014494FenMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR*
Ga0182017_1067123813300014494FenMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR*
Ga0182011_1016699233300014496FenMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSLTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR*
Ga0182019_1024718523300014498FenMSKTQILEELPRLTVSDRSQLFARLAELHEADLLDNGAPTPAERQALDEALAEFERDPSPGEPWREGCRQIRESRR*
Ga0182012_10000737253300014499BogMSKSEIIEELPRLTVADRSQLFARLAELHEADLLAVGGPTPAERQLLDEALAEFERDANPGEPWRKVFQQIRAARR*
Ga0182012_1047063523300014499BogMSKTQILEELPRLTARDRSQLFARLAEIHEADLLDGEAPACAEQKALDAAFAEFQKDRNPGEPWREVFREIRKSHR*
Ga0182021_1028794723300014502FenMSKAQILEELPRLTVGDRSQLFARLAELHEADLLDNGAPTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR*
Ga0182021_1166028023300014502FenMSKAQILEEPPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSLGEPWRDVFRQIRESRR*
Ga0182021_1212338723300014502FenMSKAQILEELPKLSVSDRSQLFARLAELHEADLLDGGAPTPAERQALDEALAEFERDPSPGEPWREVFRQ*
Ga0181516_1006454633300014655BogVTVSDRSQLFARLAELHEADHLEESVPTQGERRALDEALSEFERDPNPGEPWREVLRQIRETRR*
Ga0182027_1003021853300014839FenMSKAQILEELPRLTVSDRSQLFARLAELHEADLLAGGSPSPAERQALDEALADFERDPSPGESWRHVFRQIRESRR*
Ga0182027_1038079533300014839FenMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSLTAAERQALDEALAEFERDPSPGEPWREVFRQIRESRR*
Ga0182027_1132952823300014839FenMSKAQILEELPRLTAGDRSQLFARIAELHEADLLDGGAPTPAERQALDEALAESERDPSPGEPWRDVFRQIRESRR*
Ga0157376_1126072433300014969Miscanthus RhizosphereLPKLTPRERSQLFARLAELHEADLVGGDRPTDFERKVLDEALAEFERDGDPGKPWRDVLRELRKSRS*
Ga0137403_1026942223300015264Vadose Zone SoilMSKAQILGELPKLSVNDRSQLFARLAELHEADLLAGGSTTPAERQALDEVLADFERDPSLGEP
Ga0137403_1084183123300015264Vadose Zone SoilMSKAQILEELPKLSVSDRSQLFARLAELHEADLLAGGSPTPAELQALDEALADFERDPSPGEPWRNVIREIRASRR*
Ga0187877_138988713300017931PeatlandRLSAGDRAQLFARLAELHEADLITGDEPTPAERKILDEALAAFERDGNPGEPWRDVLLQVRQSRQ
Ga0181520_1012229123300017988BogMSKVEILEELPRLSAGDRSQLFARLAELHEADLIRGDEPTPAEREILDEALAAFERDGNPGEHHESPLK
Ga0187867_1058098623300018033PeatlandMSKVEILEELPRLTARDRSQLFARLAELHEADLISSDEPTPAERQALDAALAEFERDRNPGEPWRDVLRQVRQSSR
Ga0194063_10003362123300021075Anoxic Zone FreshwaterMSSAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFEEFERNPSPGEPWRDVFLHLCQSRR
Ga0210386_1032070223300021406SoilMSKAQILEELPKLTVSDRAQLFARLAELHEADLLAGSPDAAERAALDEAFTEMERDPSPGEPWRKVISQIRDSHS
Ga0210392_1113586123300021475SoilMSKAQILEELPKLSVSDRSQLFARLAELHEADLLAGGLPTPAERQALDEALADFERDPSPGEPWCNVFREIRASRR
Ga0212088_10002290423300022555Freshwater Lake HypolimnionMSKAQILEELPKLTAGDRSQLFARLAEIHETDLLDGDAPSPAERRALDEAFAEFERDSSPGEPWRDVFLQLRQARR
Ga0212088_1004807743300022555Freshwater Lake HypolimnionMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGAPTPVERLALDEMLAEFERDPSPGEPWRVVFRQIRASRR
Ga0224555_101129963300023088SoilMSKSQILEELPRLTAADRSQLFARIAELHEADLLDGGAPTPAERRALDEALTEFECDPSPGEPWRKVFSEIRASRR
Ga0224559_126156413300023091SoilMSKAQIFEELPKLSASDRSQLFARLAELQETDLLDGSSPLPAERQALDEALAEFERDPNPGEPWRNVIRQIRERR
Ga0247757_1005615023300023097Plant LitterMSKAQILAELPTLTASDRSHLFARLAELHEADLLEMGALSPAERQALDEALVEFERDPSPGEPWRDVFRQLRESRR
Ga0214919_1003093753300023184FreshwaterMSSAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSERQALDEAFEEFERNPSPGEPWRDVFLHLRQSRR
Ga0247688_1000009713300024186SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALTEFERDPGPGQPWREVFREIRASRR
Ga0179589_1019607323300024288Vadose Zone SoilMSKAQILEELPKLSANDRTQLFARLAELHEADLLAGGSPTPAERQALDEALADFERDPSPGEPWRNVIREIRASRR
Ga0179589_1026191513300024288Vadose Zone SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTSAERQALDEALGEFERDPSPGEPWRKVFSEIRA
Ga0208079_100126143300025481Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFVRLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRHVFRQIRESRR
Ga0207932_100351123300025495Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRAVFRQIRESRR
Ga0207931_106268423300025499Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR
Ga0208584_108752723300025533Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGAAPTPAERQALDEALADFERDPSPGEPWRDVFRQLHV
Ga0208716_101760133300025548Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPSPAERQALDEALADFERDPSPGEPWRDVFRQIRESRR
Ga0209385_100804933300025650Arctic Peat SoilMSKSQILEELPRLTANDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFSKIRASRR
Ga0208849_100296293300025664Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRNVFSEIRKAR
Ga0207933_10000111753300025679Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRKVFSEIRKPR
Ga0208357_103187513300025703Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFAEFERDPSPGEPWRNVFSEIRKSR
Ga0209746_100106373300025716Arctic Peat SoilMSKAQILEELPRLTVSDRYQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRKVFKQIRESRR
Ga0209746_118315823300025716Arctic Peat SoilMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGSAPNAAERQALDEAFTEFERDPSPGEPWRKVFSEIRASRR
Ga0209483_1000433143300025862Arctic Peat SoilMSKSQILEELPRLTADDRSQLFARIAELHEADLLDGSAPTPAERQALDEALAEFERDPSPGEPWHKVFSEIRASRR
Ga0209226_1002081343300025865Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGAAPTPAERQALDEALADFERDPAPASLGATSSGMLLS
Ga0209226_1006815033300025865Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRKVFQQIRESRR
Ga0209540_1022537523300025888Arctic Peat SoilMSKSQILEELPRLTANDRSQLFARIAELHEADLLDGGAPTPAERQALDEALTEFERDPSPGEPWRKVFSEIRASRR
Ga0209540_1061822513300025888Arctic Peat SoilMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRDVFRQIRESRR
Ga0207695_1018341943300025913Corn RhizosphereMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGAPSPAERQALDAAFAEFERDPGPGRPWREVFSQIRASRR
Ga0207700_1070533633300025928Corn, Switchgrass And Miscanthus RhizosphereMSKSQILEELPRLTAADRSQLFARIAELHEADLLDGGASTPAERQALDEALTEFERDPSPGEPWRKVFSEIRASRR
Ga0209881_110483913300026273SoilKLSVSDRSQLFARLAELHEADLLAGGSPTPAERQALDEALADFERDPSPGEPWRNVFREIRASRR
(restricted) Ga0247836_100740393300027728FreshwaterMSKAQILEELPKLTAKDRSQLFACLAEIHETDLIEGYAPSPAERQALDEAFAEFERDPSPGEPWRDVFLQLRQARR
(restricted) Ga0247836_101827133300027728FreshwaterMSKAQILEELPKLTASDRSQVFAWLAEIHETDLLDADAPSPSEKQALDEAFAEFERDPSPGEPWRDVFLKLRQSR
Ga0265337_121912923300028556RhizosphereMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWREIFRQIRESRR
Ga0265323_1013835213300028653RhizosphereMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR
Ga0265323_1025189313300028653RhizosphereMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPSPAERQALDEALAEFERDPSPGEPWRDVFRQIRESRR
Ga0302266_1014075023300028779BogMSKSEIIEELPRLTVADRSQLFARLAELHEADLLAVGGPTPAERQLLDEALAEFERDANPGEPWRKVFQQIRAARR
Ga0265338_1018666423300028800RhizosphereVEILEELPKLSPSERSQLFARLSELHEADLVCGAEPSAAERQLLDEALEEFERDRDPGKSWGEVLAEISTHRV
Ga0265338_1030418033300028800RhizosphereMSKAQILEELPRLTVGDRSQLFARLAELHEADLLDSGAPTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR
Ga0302278_1020548813300028866BogMTVSDRSQLFARLAELHETDLLEAGMPSPLEKQALDEALAEFERDPSPGEPWRKVLQEIRDSRR
Ga0311361_1044551623300029911BogMSKTQILEELPRLTARDRSQLFARLAEIHEADLLDGEAPACAEQKALDAALAEFQKDRNPGEPWREVFREIRKSHR
Ga0311328_1085413533300029939BogRLVVLDSTAMSKSEIIEELPRLTVADRSQLFARLAELHEADLLAVGGPTPAERQLLDEALAEFERDANPGEPWRKVFQQIRAARR
Ga0311336_1107419313300029990FenMSKVQILEELPRLTVSDRSQLIARLAELHEADLLDGGSPSPAERQALDEALADFERDPSHGEPWRDVFRQIRESRR
Ga0311337_1166782823300030000FenMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPSPAERQALDEALADFERDPSHGEPWRDVFRQIRESRR
Ga0170824_10697833513300031231Forest SoilMGKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWRKVISQIRASKIRTAKV
Ga0302323_10191807923300031232FenMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAEQQALDEALAEFERDPSSGEPWREVFRQLRESRQ
Ga0302318_1048148723300031258BogMTKAEILEELPRLTVSDRAQLFVRLAELHEADMVEAGAVTPAERQALDEALAEFESDPSPGEPWRDVFRQIRESSR
Ga0265316_1085473313300031344RhizosphereMSKAQILEELPRLTASDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERNPSPGEPWREVFRQIRESRR
Ga0311364_1121091513300031521FenDAALAGKSRPRQIHIISKVQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALAEFERDPSPGEPWRKVFREIRASRR
Ga0311364_1237212713300031521FenMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPSPGEPWREVFRQIRESRR
Ga0302326_1271861523300031525PalsaMSKVEILEELPRLTARDRSQLFARLAELHEADLISGDEPTPAERQILDAALAEFERDRNPGESWRDVLQQVRQSSR
Ga0307508_1035043023300031616EctomycorrhizaMSKAQILEELPKLTVNERSQLFARLAELHEADLVESSVVTLAEREALDEALAEFERDPGPGQPWREVFREIRKSQ
Ga0316219_132225613300031759FreshwaterMSKTQILEELPWLTVRDRSQLFARLAELHEADLLADGVPTDAERQALDEAFAEFEKDRNSGE
Ga0316217_1000377053300031813FreshwaterMSTTQILEELPRLTISARSQLFARLAELHEADLLSGGAPTPAEQQALDEALAEFEQDRNPGEPWRDVFREIRNSRR
Ga0316217_1001232033300031813FreshwaterMSTTQILEELPRLTSSDRSQLFARLAELHEADLLSGGAPTPAEQQALDEALAEFEQDRNPGEPWRDVFREIRNSRR
Ga0316217_1025740923300031813FreshwaterMSKTQILEELPWLTVRDRSQLFARLAELHEADLLADGVPTDAERQALDEAFAEFEKDRNSGEPWREVLREIRKSHR
Ga0302322_10080981213300031902FenMSKAQILEELPKLTVSDRSQLFARLAELHEADLLDGGSPTPAERQALDEALAEFERDPNPGEPWRIVFSEIRASRR
Ga0315283_1011529123300032164SedimentMSKAQILEELPRLTVSDRSHLFARLAELHEADLLDGGSPAPAERQALDEALTEFERDPSPGKPWREVFRQIRESRR
Ga0315283_1218683313300032164SedimentMSKAQILEELPRLTVSDRSQLFARLAELHEADLLDGGAPTPAERQALDEVLTEFERDPSPGEPWRDVFRQIRESRR
Ga0315270_1118747223300032275SedimentMSKAQILKELPSLSASDRSQLFARLAEIHEADLLDGGAPTHAERQALDEALAEFERDPGPGEPWRDAFRQLRESRR
Ga0334821_127508_260_4903300033798SoilMSKTQILEELPRLTVSDRSQLFARLAELHEADLLDGGAPTPAERQALDEAFAEFEKGRNPGEPWRDVFREIRKSRR
Ga0335037_0144507_1062_12893300034107FreshwaterMSKAQILEELPKLTASDRSQVFARLAEIHETDLLDADAPSPSEKQALDEAFAEFERDPSPGEPWRGVFFQLRQSR
Ga0335064_0620898_264_4913300034357FreshwaterMSKAQILEELPKLTASDRSQVFARLAEIHETDLLDADPPSPSEKQALDEAFAEFERDPSPGEPWRDVFFQLRQPR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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