Metagenome / Metatranscriptome Family F067034

Basic Information
Family ID	F067034
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	58 residues
Representative Sequence	AVVLIVVFGKPQLVGTPERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Number of Associated Samples	113
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	30.16 %
% of genes from short scaffolds (< 2000 bps)	29.37 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (80.159 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.619 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.76% β-sheet: 0.00% Coil/Unstructured: 48.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00072	Response_reg	57.14
PF00471	Ribosomal_L33	3.17
PF00990	GGDEF	1.59
PF13368	Toprim_C_rpt	0.79
PF00994	MoCF_biosynth	0.79
PF00293	NUDIX	0.79
PF00392	GntR	0.79
PF01569	PAP2	0.79
PF00155	Aminotran_1_2	0.79
PF00817	IMS	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	3.17
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.79

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
All Organisms	root	All Organisms	19.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
cellular organisms	root	All Organisms → cellular organisms	19.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.38 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0296922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300001164\|JGI11823J13286_1012347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300001990\|JGI24737J22298_10041453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1412	Open in IMG/M
3300002568\|C688J35102_118431959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300004479\|Ga0062595_102181158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300005332\|Ga0066388_103137596	Not Available	844	Open in IMG/M
3300006173\|Ga0070716_101211790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300009094\|Ga0111539_11845781	Not Available	701	Open in IMG/M
3300010366\|Ga0126379_11666505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300010400\|Ga0134122_12388297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300011119\|Ga0105246_12037056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300012360\|Ga0137375_10963448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300012923\|Ga0137359_11647388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300012961\|Ga0164302_10944841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300012985\|Ga0164308_10681376	Not Available	884	Open in IMG/M
3300013296\|Ga0157374_12460617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300015374\|Ga0132255_101547409	Not Available	1004	Open in IMG/M
3300016387\|Ga0182040_10777193	Not Available	788	Open in IMG/M
3300018028\|Ga0184608_10147775	Not Available	1011	Open in IMG/M
3300018081\|Ga0184625_10539852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300018476\|Ga0190274_13080004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300018476\|Ga0190274_13768176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300020004\|Ga0193755_1090294	Not Available	976	Open in IMG/M
3300021168\|Ga0210406_10271109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1387	Open in IMG/M
3300025898\|Ga0207692_10870093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300025981\|Ga0207640_10263117	Not Available	1345	Open in IMG/M
3300026023\|Ga0207677_11567046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300026121\|Ga0207683_11545504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300027480\|Ga0208993_1076195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300027654\|Ga0209799_1144782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300027907\|Ga0207428_10457361	Not Available	930	Open in IMG/M
3300028768\|Ga0307280_10272714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300028824\|Ga0307310_10314220	Not Available	764	Open in IMG/M
3300028880\|Ga0307300_10250352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300028881\|Ga0307277_10178800	Not Available	926	Open in IMG/M
3300031226\|Ga0307497_10160696	Not Available	941	Open in IMG/M
3300031681\|Ga0318572_10047385	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300032261\|Ga0306920_101405023	Not Available	1000	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.37%
Host-Associated	Host-Associated	19.84%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.19%
Plants	Host-Associated → Plants	19.84%
Aquatic	Environmental → Aquatic	3.17%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.73%
Sediment	Environmental → Aquatic → Sediment	3.17%
Peat	Environmental → Terrestrial → Peat	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.52%
Loam	Environmental → Terrestrial → Soil → Loam	15.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_02969222	3300000156	Sugar Cane Bagasse Incubating Bioreactor	SLVPLAVVLIAVFGKPHLIGTEARWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSA*
AF_2010_repII_A1DRAFT_101587832	3300000597	Forest Soil	LVPLAVVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD*
JGI1027J12803_1032233971	3300000955	Soil	KPHLLGTPQRWEAAFLLIFITIIDLFGGYTFNIALSRRTMDVAPVSPA*
JGI11823J13286_10123472	3300001164	Forest Soil	FIGVVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITIVDLFGGYTFNLALSRRTMDVSPAAPG*
JGI24737J22298_100414533	3300001990	Corn Rhizosphere	ASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
JGI24738J21930_100583032	3300002075	Corn Rhizosphere	KPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
C688J35102_1184319591	3300002568	Soil	MASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
JGI25615J43890_10220431	3300002910	Grasslands Soil	VFGKPHLIGSAPRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSA*
Ga0062590_1016783451	3300004157	Soil	VVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0066398_102220311	3300004268	Tropical Forest Soil	VVLIAVFGKPHLIATPARWEAAFLLIFITLVDLFGGYTFNIALSRRIMDISTGTPS*
Ga0062595_1021811581	3300004479	Soil	VDGMASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0066388_1012373072	3300005332	Tropical Forest Soil	AVVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVTPA*
Ga0066388_1031375961	3300005332	Tropical Forest Soil	LVPLAVVVIVVFGKPQLLGTPQRWEAALLLIFITLVDLFGGYTFNIALSRRTMDVAPVAPG*
Ga0070671_1000305247	3300005355	Switchgrass Rhizosphere	AVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0070673_1018838282	3300005364	Switchgrass Rhizosphere	LGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0070710_101091191	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VAFGKPHLLNTPQRWEAAALLIFVTMVDLFGGYTFNIALSRRMMDVSPMTPG*
Ga0070663_1003992222	3300005455	Corn Rhizosphere	PLAVVLIVVFGKPQLVGTPERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0070698_1020353321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FGKPELIGTAPRWETALLLIFITMVDLFGGYTFNIALSRRTMDVAPGGPG*
Ga0068853_1000909001	3300005539	Corn Rhizosphere	VPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0070686_1000362911	3300005544	Switchgrass Rhizosphere	PLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0068866_112307911	3300005718	Miscanthus Rhizosphere	VVLIVVFGKPQLVGTTERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0066903_1014260811	3300005764	Tropical Forest Soil	LLDTPQRWEAAILLIFVTMVDLFGGYTFNIALSRRTMDVAPVAPA*
Ga0066903_1058191302	3300005764	Tropical Forest Soil	IAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD*
Ga0066903_1067986941	3300005764	Tropical Forest Soil	AVVVIVVFGKPQLLGTPQRWEAALLLIFITLVDLFGGYTFNIALSRRTMDVAPVGPG*
Ga0066903_1087766711	3300005764	Tropical Forest Soil	VVLIVVFGKPHVLETHQRWEAAILLIFVTMVDLFGGYTFNIALSRRTMDVGTASV*
Ga0075026_1001594771	3300006057	Watersheds	PLAVVLIVVFGKPHLLDTEPRWEAALLLIFVTMVDLFGGYAFNIALSRRTMDVGTSMHG*
Ga0070716_1012117902	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VPLAVVLIAVFGKPHLIGAWPRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVGAVGSA
Ga0097621_1020890672	3300006237	Miscanthus Rhizosphere	VVLIVVFGKPQLVGTTERWEAAFLLIFITIVDLFGGYTFNLSLSLRTMGVSPASPG*
Ga0075021_111489901	3300006354	Watersheds	IVLIVVFGKPQLVDTAQRWEAAILLIFVTMADLFGGYTFNIALSRRTMDVGSSMHG*
Ga0066660_115080121	3300006800	Soil	VAVFGKPHLIGSAPRWEAAFLLIFITVVDLFGGYTFNIALSRRTMDISPAAPA*
Ga0111539_118457812	3300009094	Populus Rhizosphere	LVPLAVVLVAVFGKPHLIGSGPRWEAAFLLIFITLVDLFGGYTFNLALSRRTMDVAAAAPPT*
Ga0105247_105086091	3300009101	Switchgrass Rhizosphere	VLIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPGSPA*
Ga0105247_117617741	3300009101	Switchgrass Rhizosphere	VLIAVFGKPHLIGAWPRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVGAVGSA*
Ga0105237_112477441	3300009545	Corn Rhizosphere	IVIFGKTELLGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0126313_107903992	3300009840	Serpentine Soil	LIVVFGKPQLVGTTERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0134082_104107432	3300010303	Grasslands Soil	GKPHLIGSAPRWEAAFLLIFITVVDLFGGYTFNIALSRRTMDISPAAPA*
Ga0126370_102252252	3300010358	Tropical Forest Soil	AIVVIVMFGKPELLGTPQRWETAFLLAFVTLVDLFGGYTFNIALSRRTMDVSPVTPA*
Ga0126370_122623761	3300010358	Tropical Forest Soil	GKPYLIGSGARWEAAFLVIFITLVDLFGGYTFNLALSRRTMDVAPAAPPA*
Ga0126377_110856242	3300010362	Tropical Forest Soil	AVVVIVVFGKPQLLGTPQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVAPVGPA*
Ga0126379_116665052	3300010366	Tropical Forest Soil	PLTVVLIVVFGKPHLIGTAPRWEAAFLLIFITMVDLFGGYTFNIALSRRTMDVTPVAPA*
Ga0126379_131018782	3300010366	Tropical Forest Soil	VVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD*
Ga0126381_1033646232	3300010376	Tropical Forest Soil	AVVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD*
Ga0134126_111346221	3300010396	Terrestrial Soil	IFGKTELLGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0134122_123882972	3300010400	Terrestrial Soil	VDGMASLVPLAVVLIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPGSPA*
Ga0134121_131508432	3300010401	Terrestrial Soil	PLAIVLIVIFGKTELLGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0105246_120370561	3300011119	Miscanthus Rhizosphere	GVVDGMASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0137391_108281912	3300011270	Vadose Zone Soil	AVVLVAVFGKPEHLGTPARWEAACLLIFVTLVDLFGGYMFNIALSRRTMDVGSVPAL*
Ga0137382_108415921	3300012200	Vadose Zone Soil	VVLIVVFGKPHLLGTWQHWEAAFLLIFITAVDLFGGYTFNIALSRRTMDVAPQTSA*
Ga0137374_107760381	3300012204	Vadose Zone Soil	KPEHLGTPARWEAACLLIFITLVDLFGGYMFNIALSRRTMDVGAVPSL*
Ga0137380_109789021	3300012206	Vadose Zone Soil	FGKPEHFGTPARWEAACLLIFVTLVDLFGGYMFNIALSRRTMDVGSVPAL*
Ga0137379_104215501	3300012209	Vadose Zone Soil	LIAVFGKPHLIGSAPRWEAAFLLIFITMVDLFGGYTFNIALSRRTMDVTPVAPA*
Ga0137375_102374831	3300012360	Vadose Zone Soil	PLAVVLVAVFGKPHLIETGGRWEAALLLIFITLVDLFGGYTFNIALSRRVMDVTPA*
Ga0137375_109634482	3300012360	Vadose Zone Soil	SLVPLAVVVIVVFGKPHLIGTPQRWEAAFLLIFITLVDLFGGYMFNIALSRRTMDFTPVAPT*
Ga0137390_118554751	3300012363	Vadose Zone Soil	IVVFGKPQLIGTPQRWETAFLLIFVTMVDLFGGYTFNIALSRRTMDVAPGGPM*
Ga0157295_102494171	3300012906	Soil	IVVFGKPQLVGTPERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPVSPA*
Ga0157298_102750252	3300012913	Soil	LIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPASSA*
Ga0157302_104587582	3300012915	Soil	GKTELLGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0137359_116473882	3300012923	Vadose Zone Soil	ASLLPLAVVLIAVFGKPHLIGSAPRWEAAFLLIFITMVDLFGGYTFNLALSRRTMDVTPVAPA*
Ga0137413_109565211	3300012924	Vadose Zone Soil	IVVFGKTQLIGTWERWETAGLLIFVTMVDLFGGYMFNIALSRRTMDVGQSPI*
Ga0164302_109448412	3300012961	Soil	LVPLAVVLIVVFGKPQLIETAPRWEAAMLLIFITIVDLFGGYTFNIALSRRTMDVASVAPA*
Ga0164308_106813762	3300012985	Soil	VDGMASLVPLAVVLIVVFGKPQLVGTTERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0157307_10349902	3300013096	Soil	GKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0157374_124606171	3300013296	Miscanthus Rhizosphere	SLVPLAVVLIVVFGKPELVGTPQRWEAALLLIFISVVAVSGGYTFNLALSRRTMDVTPGSPA*
Ga0075350_11547501	3300014315	Natural And Restored Wetlands	LLIVVFGKPHLLDSERKWEAAFLLMFVTIVDLFGGYTFNIALSRRTMDVGPGMHM*
Ga0157379_120832362	3300014968	Switchgrass Rhizosphere	AVVLIVVFGKPQLVGTPERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0173483_102325431	3300015077	Soil	SLVPLAIVLIVIFGKPELLGTQQRWEAAILLVFITIVDLFGGYTFNIALSRRIMDIAPAAPA*
Ga0132257_1012899463	3300015373	Arabidopsis Rhizosphere	IPLGVVVVAAFGGAPLMNTPQRWEAALLLIFITAVDLFGGYTLNIALSRRTTNVAPAVSA
Ga0132255_1015474091	3300015374	Arabidopsis Rhizosphere	LVPLAVVLIVVFGKPQLVGTTERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG*
Ga0182036_104789243	3300016270	Soil	IVLIAVFGKPELLETPQRWEAALLLIFVTLVDLFGGYTFNIALSRRTMDVGTIAPT
Ga0182041_117916142	3300016294	Soil	AVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSA
Ga0182041_122345071	3300016294	Soil	AIVLIVVFGKPQLVETPQRWESAALLIFVTAVDLFGGYTFNIALSRRVMDVAPAQP
Ga0182034_103393423	3300016371	Soil	PLAIVLIVVFGKPYLLDTPQRWEAAILLIFITMVDLFGGYTFNIALSRRTMDVAPVTPA
Ga0182040_107771932	3300016387	Soil	VPLAVVLIAVFGKPHLIGAWPRWEAAFLLIFITLVDLFGGYTLNIALSRRTMDVGAVGSA
Ga0182039_101952423	3300016422	Soil	PLAVVVIVVFGKPQLLDTAQRWEAAILLIFVTLVDLFGGYTFNIALSRRTMDLTPVAPA
Ga0184608_101477751	3300018028	Groundwater Sediment	AGNRFIGVVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0184625_105398521	3300018081	Groundwater Sediment	SLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0190274_130800041	3300018476	Soil	MASLVPLAVVLIVVFGKPALIGTAQRWETAFLLIFITLIDLFGGYTFNIALSRRTMDVGPGAM
Ga0190274_137681761	3300018476	Soil	DGMASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0193755_10902942	3300020004	Soil	ASLVPRAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0210406_102711091	3300021168	Soil	ASLIPLAVVLIVAFGKPHLLNTPQRWEAAALLIFVTMVDLFGGYTFNIALSRRMMDVSPMTPG
Ga0242654_100517763	3300022726	Soil	VVLIVAFGKPHLLNTPQRWEAAALLIFVTMVDLFGGYTFNIALSRRMMDVSPVTPG
Ga0137417_134889514	3300024330	Vadose Zone Soil	MASWSLAVVLIVVVGKPQLLDSSASWEAAHLLIFVTMVTVGGLPFNIALSRRTMDIAASRHEDDATHD
Ga0207692_108700932	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MASLVPLAVVLIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPGSPA
Ga0207686_108735292	3300025934	Miscanthus Rhizosphere	KPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0207640_102631172	3300025981	Corn Rhizosphere	GNRFIGVVDGMASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0207677_115670461	3300026023	Miscanthus Rhizosphere	ASLVPLAVVLIVVFGKPQLVGTPERWEAAFLLIFITIVDLFGGYTFNLALSRRTMDVSPVSPA
Ga0207641_124375081	3300026088	Switchgrass Rhizosphere	AVVLIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPGSPA
Ga0207674_102121304	3300026116	Corn Rhizosphere	LIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0207683_115455041	3300026121	Miscanthus Rhizosphere	GMASLVPLAVVLIVVFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0209156_102445862	3300026547	Soil	AVVLVAVFGKPHLIGSGARWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVAPAAPA
Ga0208095_10148402	3300027104	Forest Soil	LVPLAVVLIVAFGKPHLLNTPQRWEAAALLIFMTMVDLFGGYTFNIALSRRMMDVSPMTP
Ga0208993_10761951	3300027480	Forest Soil	GVVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITIVDLFGGYTFNLALSRRTMDVSPAAPG
Ga0208993_10803191	3300027480	Forest Soil	AVVVIVVFGKPQLIGTPQRWETALLLIFITMVDLFGGYTFNIALSRRTMDVTPGGPM
Ga0209799_11447821	3300027654	Tropical Forest Soil	GMASLVPLAVVLIAVFGKPHLIATPARWEAAFLLIFITLVDLFGGYTFNIALSRRIMDISTGTPS
Ga0209465_103053341	3300027874	Tropical Forest Soil	VIFGKPELLNTPQRWEAAILLLFIAAVDVFGGYTFNIALSRRTMDVGT
Ga0209590_100766101	3300027882	Vadose Zone Soil	FGKPEHVGTPARWEAACLLIFVTLVDLFGGYMFNIALSRRTMDVGSVPAL
Ga0207428_104573612	3300027907	Populus Rhizosphere	GVVDGMASLVPLAVVLIVVFGKPELVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPGSPA
Ga0268266_109241182	3300028379	Switchgrass Rhizosphere	VVLIVVFGKPQLVGTPERWEAAFLLIFITVVDLFGGYTFNLALSRRTMDVSPVSPA
Ga0307285_100981201	3300028712	Soil	VFGKPQLVGTTERWEAACLLIFITIVDLFGGYTFNLALSRRTMDVSPASPG
Ga0307280_102727141	3300028768	Soil	DGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0307282_102663921	3300028784	Soil	GKPQLIGTPQRWETALLLIFITMVDLFGGYTFNIALSRRTMDVTPGGPM
Ga0307310_103142201	3300028824	Soil	PSAGNRFIGVVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0307312_102384021	3300028828	Soil	VFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0307300_102503521	3300028880	Soil	VVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0307277_101788001	3300028881	Soil	SAGNRFIGVVDGMASLVPLAVVLIVVFGKPQLVGTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPSGPG
Ga0307497_101606961	3300031226	Soil	IGVVDGMASLVPLAVVLIVVFGKPQLVVTPQRWEAALLLIFITVVDLFGGYTFNLALSRRTMDVTPAGPG
Ga0170824_1095470272	3300031231	Forest Soil	PILIFGKPELLGTPERWEAAILLLFVAAIDLFGGYMFNIALSRRTMDVAGPMTS
Ga0318528_100526684	3300031561	Soil	MASLVPLAVVLIAVFGKPHLIGTEPRWEAAFLLIFITLVDLFGGYRFNIALSRRIMDVTPVAPA
Ga0310915_107281521	3300031573	Soil	VLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD
Ga0318572_100473851	3300031681	Soil	ASMVPLGISLIVIVGKPELLGTLQRWEAAFLPLFIAAVDLFGGYTFNLALSRRMMDVGPMTA
Ga0318572_101126461	3300031681	Soil	VVLIAVFGKPHLIGSAPRWEAAFLLIFITAVDLFGGYTFNIALSRRTMDITPAAPA
Ga0318560_106932031	3300031682	Soil	VFGKPYLLDTPQRWEAAILLIFITMVDLFGGYTFNIALSRRTMDVAPVTPA
Ga0306917_101793783	3300031719	Soil	IVLIVVFGKPYLLDTPQRWEAAILLIFITMVDLFGGYTFNIALSRRTMDVAPVTPA
Ga0306917_106617972	3300031719	Soil	LVPLAVVLIAVFGKPHLIGTEPRWEAAFLLIFITLVDLFGGYRFNIALSRRIMDVTPVAP
Ga0318493_100791334	3300031723	Soil	MASLVPLAVVLIAVFGKPHLIGTEPRWEAAFLLIFITLVDLFGGYTFNIALSRRIMDVTPVAPA
Ga0318500_101507523	3300031724	Soil	KPYLLDTPQRWEAAILLIFITMVDLFGGYTFNIALSRRTMDVAPVTPA
Ga0318554_108745651	3300031765	Soil	VVLIAVFGKPHLIGAGQRWEAAVLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSA
Ga0318509_101379304	3300031768	Soil	MASLVPLAVVLIAVFGKPHLIGTEPRWEAAFLLIFITLVDLFGGYRFNIALSRRIMD
Ga0318543_100512874	3300031777	Soil	VPLAVVLIAVFGKPHLIGTEPRWEAAFLLIFITLVDLFGGYTFNIALSRRIMDVTPVAPA
Ga0306919_101217693	3300031879	Soil	LLDTPQRWEAAILLIFVTMVDLFGGYTFNIALSRRTMDVAPVAPA
Ga0302322_1038028481	3300031902	Fen	LAVLLIVVFGKPHLIETEQRWEAAFLLMFVTMVDLFGGYTFNLALSRRTMDVGPGMHA
Ga0306921_100143481	3300031912	Soil	FGKPYLLDTPQRWEAAILLIFVTMVDLFGGYTFNIALSRRTMDVAPVAPA
Ga0306922_120940741	3300032001	Soil	PLAIVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSA
Ga0318558_103763701	3300032044	Soil	VVLIAVFGKPHLIGSWQRWEAAFLLIFITLVDLFGGYTFNIALSRRTMDVSPVGSD
Ga0307471_1026007031	3300032180	Hardwood Forest Soil	VVLIAVFGKPHLIATPPRWEAAFLLIFITLVDLFGGYTFNIALSRRIMDISPAASS
Ga0306920_1014050232	3300032261	Soil	LVPLAIVLIVVFGKPQLLDTAQRWEAAILLIFMTLVDLFGGYTFNIALSRRTMDFTPVAP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067034

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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