NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F066977

Metagenome Family F066977

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066977
Family Type Metagenome
Number of Sequences 126
Average Sequence Length 64 residues
Representative Sequence MGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH
Number of Associated Samples 81
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.79 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(21.429 % of family members)
Environment Ontology (ENVO) Unclassified
(24.603 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.61%    β-sheet: 0.00%    Coil/Unstructured: 48.39%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00239Resolvase 6.40
PF00543P-II 2.40
PF07508Recombinase 1.60
PF03734YkuD 1.60
PF02687FtsX 0.80
PF13481AAA_25 0.80
PF03413PepSY 0.80
PF06078DUF937 0.80
PF06844DUF1244 0.80
PF00589Phage_integrase 0.80
PF05957DUF883 0.80
PF04002RadC 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 8.00
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 6.40
COG0347Nitrogen regulatory protein PIISignal transduction mechanisms [T] 2.40
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 1.60
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 1.60
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 0.80
COG3492Uncharacterized conserved protein, DUF1244 familyFunction unknown [S] 0.80
COG3753Uncharacterized conserved protein YidB, DUF937 familyFunction unknown [S] 0.80
COG4575Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 familyTranslation, ribosomal structure and biogenesis [J] 0.80


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006871|Ga0075434_101215449Not Available766Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere21.43%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.49%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil10.32%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil7.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.97%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10868671923300000955SoilMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETGAEWEAKFKPKTEH*
Ga0066388_10039414213300005332Tropical Forest SoilAEIMGNKKAQPSARVAAAMAILKKTLPDLASVEHTGDGPRPFAIIPEVVESAAEWEAKFKPKTEH*
Ga0066388_10251886623300005332Tropical Forest SoilTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIDAAAEWEAKFKPKTEH*
Ga0066388_10422248723300005332Tropical Forest SoilMPGKGQDPEVRALCEKFTPAAIATLAEIMGNKKAQPLARVAAAMAILNKTLPDLASIEHTGDGPRPFAVIPEVVGTAAEWEAKFKPKTEH*
Ga0066388_10506269533300005332Tropical Forest SoilTLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDSAAEWEAKFKPKTEH*
Ga0066388_10535705713300005332Tropical Forest SoilDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFALIPEVIDTAAEWEAKFKPKTEH*
Ga0066388_10558478013300005332Tropical Forest SoilRVAAAMAILKKTLPELASIEHTGEDLGPVIPEVVESAAEWEAKFKPKTEH*
Ga0066388_10578374223300005332Tropical Forest SoilRVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIDTAAEWEAKFKPKTEH*
Ga0066388_10736485023300005332Tropical Forest SoilVLCGIKKTLPDLASIEHTGDGPRPFAIIPEVIETAAEWEAKFKPKTEH*
Ga0068869_10079432313300005334Miscanthus RhizosphereKKAQPSARVAAASAILKKTLPDLASIEHTGDGPRPFAVIPEAIATAAEWEAKFKPKTEH*
Ga0070691_1033904123300005341Corn, Switchgrass And Miscanthus RhizosphereILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKTKTEH*
Ga0070668_10080209813300005347Switchgrass RhizosphereQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKTKTEH*
Ga0070675_10157725913300005354Miscanthus RhizosphereAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0070674_10079606313300005356Miscanthus RhizosphereVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0070674_10079606323300005356Miscanthus RhizosphereMAILKKTLPDLSAVEHTGDTIQPFAIIPEAIGTAAEWEAKFKPKTVQPRTS*
Ga0070688_10141653213300005365Switchgrass RhizosphereAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKCKLKTEH*
Ga0070711_10163283213300005439Corn, Switchgrass And Miscanthus RhizosphereATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAINTAAEWEAKFKPKRALAT*
Ga0070672_10122998723300005543Miscanthus RhizosphereLASIEHTGDGPRPFAVIPEAIDTAAEWEDKFKPKTEH*
Ga0068856_10217700723300005614Corn RhizosphereKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0068859_10126277713300005617Switchgrass RhizospherePDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0066905_10069077713300005713Tropical Forest SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEAVESAAEWEAKFKPKTEH*
Ga0066903_10534387423300005764Tropical Forest SoilMAILKKTLPDLASLQHTGDGPRPFAVIPEVIESAAEWEAK
Ga0066903_10540430223300005764Tropical Forest SoilSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIDTAAEWEAKFKPKTEH*
Ga0066903_10598172413300005764Tropical Forest SoilRPKRDPEVRALCEKFTPHAIATLAEIMGDKKAQPSARVAAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTEH*
Ga0066903_10762949213300005764Tropical Forest SoilRDPEVRALCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIATAAEWEAKFKPKTEH*
Ga0070712_10106926113300006175Corn, Switchgrass And Miscanthus RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEAVESGAEWEAKFRPKTEH*
Ga0075421_10169589423300006845Populus RhizosphereLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0075431_10058841413300006847Populus RhizosphereEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPDVIETAAEWEAKFKPKTEH*
Ga0075431_10185463613300006847Populus RhizosphereMLSLAEIMGNKKAQPSARVAAAMAILKKTLPDIASIEHTGDGPRPFAVIPEAIETAAEWEVKFKPKTEH*
Ga0075425_10100304823300006854Populus RhizosphereMGNKKAQPSARVAAAMAILKKTLPDIASIEHTGDGPRPFAVIPEAIETAAEWEVKFKPKTEH*
Ga0075425_10207127523300006854Populus RhizosphereGGRPRQDPEVRALCEKFTPGAIATLAEIMGNKKAQPSARIAAAVAILKKTLPDLASIEHTGDGPRPFALIPEAIETAAEWEATFKPKTEH*
Ga0075425_10241881113300006854Populus RhizospherePAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0075434_10080400113300006871Populus RhizosphereAEIMGNKKAQPSARIAAAVAILKKTLPDLASIEHTGDGPRPFALIPEAIETAAEWEATFKPKTEH*
Ga0075434_10121544913300006871Populus RhizosphereLKEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0075424_10201735913300006904Populus RhizosphereMLSLAEIMGNKKAQPSARVAAAMAILKKTLPDIASIEHTGDGPRPFAVIPEAIETAAEWEVKFKPK*
Ga0105251_1040837813300009011Switchgrass RhizosphereMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPK
Ga0111539_1121149713300009094Populus RhizosphereASIEHTGDGPRPFAVIPEAIETAAEWEVKFKPKTEH*
Ga0111539_1178387313300009094Populus RhizosphereMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPETIETAAEWEAKFKPKTEH*
Ga0111539_1196162233300009094Populus RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKFKPKTEH*
Ga0111539_1274201113300009094Populus RhizospherePRQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEGIETAAEWEAKFKPKATEH*
Ga0111539_1304788613300009094Populus RhizosphereILKKTLPDLASIEHTGDGPRPFAVIPEAIATADEWEAKFKPKTEH*
Ga0111539_1344494623300009094Populus RhizosphereMKDKASQPSARVTAAMAILKKTLPDLSAVEHTGDIIQPFALIPSEIEDAATWKDRFKPKATEH*
Ga0075418_1060687913300009100Populus RhizosphereIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETATEWEAKFKPKTEH*
Ga0075418_1112145213300009100Populus RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWQAKFKPKTEH*
Ga0075418_1169456513300009100Populus RhizospherePAAIATLAEIMGKAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0114129_1266832113300009147Populus RhizosphereKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEGIETAAEWEAKFKPKATEH*
Ga0114129_1323658513300009147Populus RhizosphereMGNKKAQPSARIAAAVAILKKTLPDLASIEHTGDGPRPFALIPEAIETAAEWEATFKPKTEH*
Ga0114129_1326194113300009147Populus RhizospherePSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0111538_1068548113300009156Populus RhizosphereMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0111538_1320756423300009156Populus RhizosphereLCEKFTPDAIITLAEIMQDKGSQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEA
Ga0111538_1335245113300009156Populus RhizosphereLKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0075423_1045612713300009162Populus RhizosphereKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0075423_1284121713300009162Populus RhizosphereQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEVKFKPKTEH*
Ga0105241_1255417813300009174Corn RhizosphereKFTPAAIATLAKIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0105249_1013995113300009553Switchgrass RhizosphereDPEVRALCEMFTPGAIATLAEIMGNKKAQPSARVAAAMGILKKTLPDLASIEHRGDGPRPFAVIPETIETAAEWEAKFKPKTEH*
Ga0105249_1188459313300009553Switchgrass RhizosphereDPEVRALCEMFTPGAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKCKPKATEH*
Ga0126380_1183488013300010043Tropical Forest SoilPRQDPEVRALCERFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIGSAAEWEAKCKPKTEH*
Ga0126384_1181914823300010046Tropical Forest SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTE
Ga0126384_1191885723300010046Tropical Forest SoilLCEKFTPEAIETLAEIMQDKDSQPSARVSAAMAILNKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTEH*
Ga0126384_1239770523300010046Tropical Forest SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAVESAAEWEAKFRPKTAH*
Ga0126382_1163342823300010047Tropical Forest SoilMGNKKAQPSARVAAAMAILKKTLPDLSAIEHTGDTIQPFALIPEQIEDVAAWEAKFKPKTEH*
Ga0126373_1271225413300010048Tropical Forest SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDTAAEWEATFKPKTEH*
Ga0126372_1020098733300010360Tropical Forest SoilLCEQFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIETAAEWEATFKPKTEH*
Ga0126372_1263647423300010360Tropical Forest SoilMERSVNVTSPLDGTMRQRHQPEIRALCEKFTPGAIATLAEIMGDKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVVGTAAEWEAKFKPKTEH*
Ga0126378_1276563123300010361Tropical Forest SoilMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDAAAEWQAKFKPKTEH*
Ga0126379_1374612113300010366Tropical Forest SoilIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASVEHTGDGPRPFAVIPEVIDTAAEWEATFKPKTEH*
Ga0134128_1006131713300010373Terrestrial SoilSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKFKPKTEH*
Ga0134128_1177499413300010373Terrestrial SoilMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0126381_10152947713300010376Tropical Forest SoilSVTRRFVRFCEKFTPAAIATPAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDTAAEWEATFKPKTEH*
Ga0126381_10257994923300010376Tropical Forest SoilMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAIVPEIIESAAEWEAKFKPKTEH*
Ga0126381_10464082813300010376Tropical Forest SoilMAILKKTLPDLASIEHTGDGPRPFAIIPEVIDTAAEWEAKFKPKTEH*
Ga0134126_1012272913300010396Terrestrial SoilIEHTGDGPRPFAVIPEAIETAAEWEDTFKPKTVQPRTS*
Ga0134126_1045530833300010396Terrestrial SoilPPQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKTEH*
Ga0134126_1057175813300010396Terrestrial SoilMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKFKPKTEH*
Ga0134124_1155022023300010397Terrestrial SoilMAILKKTLFDLSAVEHTGDTIQPFAIIPEAIGTAAEWEAKFKPKTVQPRTS*
Ga0126383_1085438433300010398Tropical Forest SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIATAAEWEAKFKP
Ga0126383_1190029013300010398Tropical Forest SoilNEKAQPSARVAAAMAILKKTLPDLASLQHTGDGPRPFAVIPEVIDTAAEWEAKFKPKTEH
Ga0134122_1040436413300010400Terrestrial SoilTLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0134122_1271076613300010400Terrestrial SoilRPRQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKCKPKATEH*
Ga0134121_1037659413300010401Terrestrial SoilMGDKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH
Ga0134121_1061558323300010401Terrestrial SoilSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEGIETAAEWEAKFKPKTEH*
Ga0105246_1037063013300011119Miscanthus RhizosphereALCEKFTPGAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0105246_1041760523300011119Miscanthus RhizospherePDLASIEHTGDGPRPFAVIPEGIETAAEWEAKFKPKATGH*
Ga0157303_1016490413300012896SoilMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKFKPKT
Ga0157285_1021491013300012897SoilMGDKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETATEWEAKFKPKTEH*
Ga0157282_1011307223300012904SoilPRQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEDKFKPKTEH*
Ga0157286_1035167413300012908SoilMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIATADEWEAKFKPKTEH*
Ga0126375_1121582613300012948Tropical Forest SoilMERCVIVDYGHLTPAAIATLAEMMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKFKPETEH*
Ga0157370_1108657823300013104Corn RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKC
Ga0157370_1204778413300013104Corn RhizosphereDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH*
Ga0157369_1024746353300013105Corn RhizosphereMGDKKAQPSARVAAAMAILKKTLPDLASIEHTGNGPRPFAVIPEAIETAAEWE
Ga0157374_1193493323300013296Miscanthus RhizosphereLCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0163162_1010184973300013306Switchgrass RhizosphereMGNKKAQPSARVAAASAILKKTLPDLASIEHTGDGPRPFAVIPEAIATAAEWEAKFKPKTEH*
Ga0163162_1226583313300013306Switchgrass RhizospherePSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKCKPKATEH*
Ga0157372_1295393013300013307Corn RhizosphereLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKTKTEH*
Ga0163163_1162567323300014325Switchgrass RhizosphereMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIATAAEWEAKCKPKTEH*
Ga0157379_1080417223300014968Switchgrass RhizosphereMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH*
Ga0157379_1108054713300014968Switchgrass RhizosphereRVAAASAILKKTLPDLASIEHTGDGPRPFAVIPEAIATAAEWEAKFKPKTEH*
Ga0157379_1214466823300014968Switchgrass RhizospherePDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKSKTEH*
Ga0173483_1074247823300015077SoilMGNKKAQPSALVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEDTFKPKTEH*
Ga0132257_10151270923300015373Arabidopsis RhizosphereMGNKKAQPSARIAAAVAILKKTLPDLASIEHTGDGPRPFVVILEVIDSAAEWEAKFKPKTEH*
Ga0132255_10515256713300015374Arabidopsis RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEATFKPKTEH*
Ga0182036_1083508413300016270SoilLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDTAAEWEAKFKPKTEH
Ga0182041_1202013423300016294SoilMDVQSIGAASARVAAAMGILKKTLPDLASIEHTGDGPRPFAVIPEAIGTAAEWEAKFKPKTEH
Ga0182033_1140386313300016319SoilVRIATLAEIIGDKKAQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIGSAAEWEAKFKPKTEH
Ga0182037_1030307413300016404SoilASVEHTGDAPTPFAIIPAVMDTAAEWEAKFKPKTEH
Ga0173481_1041465813300019356SoilTLAEIMKDKASQPSARVTAAMAILKKTLPDLSAVEHTGDIIQPFALIPGEIEDAATWKDRFKPKATEH
Ga0173481_1046244813300019356SoilMAILKKTLPDLASIEHTGDGPRPFAVIPEAIATADEWEAKFKPKTEH
Ga0126371_1195828813300021560Tropical Forest SoilMAILKKTLPDLASIEHTGDGPRPFAVIPEVIDSAAEWEAKFRPKTEH
Ga0207688_1070937613300025901Corn, Switchgrass And Miscanthus RhizosphereMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEDKFKPKTEH
Ga0207663_1034450113300025916Corn, Switchgrass And Miscanthus RhizosphereMAILKKTLPDLSAVEHTGDTIQPFAIIPEAIGTAAEWEAKFKPKTVQPRTS
Ga0207700_1084243313300025928Corn, Switchgrass And Miscanthus RhizosphereLCEKFTPDAIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH
Ga0207691_1122464613300025940Miscanthus RhizosphereLKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH
Ga0207689_1147858023300025942Miscanthus RhizosphereMGDKKAQPSARVAAASAILKKTLPDLASIEHTGDGPRPFAVIPEAIATAAEWEAKFKPKTEH
Ga0209177_1031139023300027775Agricultural SoilKKAQPSARIAAAVAILKKTLPDLASIEHTGDGPRPFALIPEAIETAAEWEATFKPKTEH
Ga0207428_1088632113300027907Populus RhizosphereGRPRQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEGIETAAEWEAKFKPKATEH
Ga0310887_1103943113300031547SoilCRAGEAAHDESQWWQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIETAAEWEAKCKPKTEH
Ga0310915_1104654813300031573SoilILKKTLPDLASIEHTGDGPRPFAVIPEVIGSAAEWEAKFKPKTEH
Ga0306918_1024468213300031744SoilAQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIGSAAEWEAKFKPKTEH
Ga0306925_1058169613300031890SoilMAILKKTLPDLASIEHTGDGPRPFAVIPEAIGTAAEWEAKFKPKTEH
Ga0306923_1046505413300031910SoilMPIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIGTAAEWEAKFKPKTEH
Ga0306921_1026587123300031912SoilVRIATLAEIIGDKKAQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTEH
Ga0310901_1055777513300031940SoilPQDPEVRALCEKFTPAAIATLAEIMGNKKAQPSARVAAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIASAAEWEAKCKPKTEH
Ga0310910_1069394113300031946SoilVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTEH
Ga0306922_1106806023300032001SoilMPIETLAEIMQDKDSQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEAIG
Ga0306924_1067169413300032076SoilAQPSHQVRALCEKFTPSAIATLAEIMGDKKAQPSARVSAAMAILKKTLPDLASIEHTGDGPRPFAVIPEVIETAAEWEAKFKPKTEH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.