Metagenome Family F066656

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066656
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	60 residues
Representative Sequence	MKKAELERFLLRIALPPVRLGLYVKRLEARRADPAARTVAIDELRRAARIRARLARQGWWN
Number of Associated Samples	90
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.24 %
% of genes near scaffold ends (potentially truncated)	26.98 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (45.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.69% β-sheet: 0.00% Coil/Unstructured: 48.31%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF04392	ABC_sub_bind	4.76
PF01381	HTH_3	3.17
PF06037	DUF922	3.17
PF00196	GerE	1.59
PF08281	Sigma70_r4_2	1.59
PF04542	Sigma70_r2	1.59
PF01547	SBP_bac_1	1.59
PF01810	LysE	1.59
PF01391	Collagen	1.59
PF02597	ThiS	1.59
PF03358	FMN_red	1.59
PF00072	Response_reg	0.79
PF01555	N6_N4_Mtase	0.79
PF13489	Methyltransf_23	0.79
PF13412	HTH_24	0.79
PF02384	N6_Mtase	0.79
PF13493	DUF4118	0.79
PF03729	DUF308	0.79
PF06348	DUF1059	0.79
PF01904	DUF72	0.79
PF13560	HTH_31	0.79
PF07676	PD40	0.79
PF14534	DUF4440	0.79
PF13649	Methyltransf_25	0.79
PF08734	GYD	0.79
PF03109	ABC1	0.79
PF05922	Inhibitor_I9	0.79
PF05494	MlaC	0.79
PF03061	4HBT	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.76
COG5661	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	3.17
COG5664	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	3.17
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.59
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.59
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.59
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	1.59
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	1.59
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.59
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.79
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.79
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.79
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.79
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.79
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.79
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	71.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.35 %
Unclassified	root	N/A	4.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	71.43 %
Unclassified	root	N/A	4.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.38 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	69.84 %
Unclassified	root	N/A	4.76 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	63.49 %
Unclassified	root	N/A	4.76 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	1.59 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.79 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	63.49 %
Unclassified	root	N/A	4.76 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.79 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	63.49 %
Unclassified	root	N/A	4.76 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1.59 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.79 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.79 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	63.49 %
Unclassified	root	N/A	4.76 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1.59 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.79 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.79 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_121032602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300001661\|JGI12053J15887_10588430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005171\|Ga0066677_10179948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1174	Open in IMG/M
3300005172\|Ga0066683_10000304	All Organisms → cellular organisms → Bacteria	14305	Open in IMG/M
3300005172\|Ga0066683_10501985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300005172\|Ga0066683_10714485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300005176\|Ga0066679_10143385	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300005176\|Ga0066679_10211002	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300005180\|Ga0066685_10231627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1271	Open in IMG/M
3300005184\|Ga0066671_10048415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2132	Open in IMG/M
3300005332\|Ga0066388_101478085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1187	Open in IMG/M
3300005332\|Ga0066388_102067225	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1023	Open in IMG/M
3300005332\|Ga0066388_105359171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	650	Open in IMG/M
3300005440\|Ga0070705_100079008	All Organisms → cellular organisms → Bacteria → Proteobacteria	2014	Open in IMG/M
3300005440\|Ga0070705_100626666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	835	Open in IMG/M
3300005444\|Ga0070694_101258018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300005445\|Ga0070708_100035532	All Organisms → cellular organisms → Bacteria	4341	Open in IMG/M
3300005445\|Ga0070708_100224127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1764	Open in IMG/M
3300005445\|Ga0070708_100247590	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300005451\|Ga0066681_10741822	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300005467\|Ga0070706_100046101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4024	Open in IMG/M
3300005467\|Ga0070706_101690487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300005468\|Ga0070707_100368825	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005518\|Ga0070699_100111668	Not Available	2400	Open in IMG/M
3300005518\|Ga0070699_101913318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300005536\|Ga0070697_100239033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1550	Open in IMG/M
3300005536\|Ga0070697_100283787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1421	Open in IMG/M
3300005536\|Ga0070697_101064599	Not Available	719	Open in IMG/M
3300005540\|Ga0066697_10061821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2140	Open in IMG/M
3300005546\|Ga0070696_101717132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300005553\|Ga0066695_10045680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2591	Open in IMG/M
3300005553\|Ga0066695_10842290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300005554\|Ga0066661_10060943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2184	Open in IMG/M
3300005555\|Ga0066692_10935183	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300005556\|Ga0066707_10729257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300005558\|Ga0066698_10299218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1114	Open in IMG/M
3300005559\|Ga0066700_10686131	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300005559\|Ga0066700_10795733	Not Available	637	Open in IMG/M
3300005561\|Ga0066699_10008786	All Organisms → cellular organisms → Bacteria → Proteobacteria	4853	Open in IMG/M
3300005568\|Ga0066703_10171837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1308	Open in IMG/M
3300005569\|Ga0066705_10378469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300005576\|Ga0066708_10021447	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300005576\|Ga0066708_10837318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300005586\|Ga0066691_10667981	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300005598\|Ga0066706_10057745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2658	Open in IMG/M
3300005764\|Ga0066903_108342745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300005937\|Ga0081455_10031641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4781	Open in IMG/M
3300006031\|Ga0066651_10071181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1684	Open in IMG/M
3300006046\|Ga0066652_101954736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300006049\|Ga0075417_10126684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1175	Open in IMG/M
3300006058\|Ga0075432_10432081	Not Available	574	Open in IMG/M
3300006791\|Ga0066653_10141741	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006800\|Ga0066660_10007349	All Organisms → cellular organisms → Bacteria	5692	Open in IMG/M
3300006845\|Ga0075421_102453436	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300006852\|Ga0075433_10252459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1565	Open in IMG/M
3300006854\|Ga0075425_101153105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300006904\|Ga0075424_100302278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1704	Open in IMG/M
3300006904\|Ga0075424_102806294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300006969\|Ga0075419_10662502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300007076\|Ga0075435_101935222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300007258\|Ga0099793_10067506	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300009012\|Ga0066710_100182782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2964	Open in IMG/M
3300009012\|Ga0066710_101033432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1269	Open in IMG/M
3300009012\|Ga0066710_103723813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300009012\|Ga0066710_103843567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300009137\|Ga0066709_100250199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2372	Open in IMG/M
3300009137\|Ga0066709_100997386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1226	Open in IMG/M
3300009137\|Ga0066709_101120226	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300009137\|Ga0066709_102160121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	768	Open in IMG/M
3300009137\|Ga0066709_102331170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300009147\|Ga0114129_10427489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1741	Open in IMG/M
3300009147\|Ga0114129_10534606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1527	Open in IMG/M
3300009147\|Ga0114129_12210325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300009162\|Ga0075423_10472921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1318	Open in IMG/M
3300010304\|Ga0134088_10705947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300010320\|Ga0134109_10044942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1447	Open in IMG/M
3300010336\|Ga0134071_10333951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300010358\|Ga0126370_10130965	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300010358\|Ga0126370_11656059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300010359\|Ga0126376_10087140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2341	Open in IMG/M
3300010359\|Ga0126376_11415226	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010360\|Ga0126372_11748778	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300011271\|Ga0137393_11238358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300012189\|Ga0137388_11112741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300012205\|Ga0137362_11745786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300012362\|Ga0137361_11922901	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300012582\|Ga0137358_10040512	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300012685\|Ga0137397_10058760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2772	Open in IMG/M
3300012918\|Ga0137396_10121601	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1882	Open in IMG/M
3300012922\|Ga0137394_10247417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	1524	Open in IMG/M
3300012925\|Ga0137419_11448286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300012927\|Ga0137416_10192000	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012929\|Ga0137404_11326253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300012930\|Ga0137407_12194646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300012944\|Ga0137410_10026459	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300012977\|Ga0134087_10055864	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1567	Open in IMG/M
3300014150\|Ga0134081_10275602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300015054\|Ga0137420_1087348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300015054\|Ga0137420_1356914	All Organisms → cellular organisms → Bacteria	2871	Open in IMG/M
3300015264\|Ga0137403_10784529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	809	Open in IMG/M
3300015264\|Ga0137403_11572469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300015356\|Ga0134073_10076582	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	948	Open in IMG/M
3300015358\|Ga0134089_10318704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300015371\|Ga0132258_13643697	Not Available	1052	Open in IMG/M
3300018433\|Ga0066667_10001564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8618	Open in IMG/M
3300018433\|Ga0066667_10025504	All Organisms → cellular organisms → Bacteria	3231	Open in IMG/M
3300018433\|Ga0066667_10069613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2218	Open in IMG/M
3300018433\|Ga0066667_10608218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	912	Open in IMG/M
3300018482\|Ga0066669_11546873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300018482\|Ga0066669_12241234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300020170\|Ga0179594_10031514	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300025910\|Ga0207684_10057495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3300	Open in IMG/M
3300025910\|Ga0207684_10269425	Not Available	1469	Open in IMG/M
3300025910\|Ga0207684_10321815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1333	Open in IMG/M
3300025910\|Ga0207684_11055350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	678	Open in IMG/M
3300025922\|Ga0207646_10721600	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300026318\|Ga0209471_1006943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6082	Open in IMG/M
3300026327\|Ga0209266_1020997	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300026523\|Ga0209808_1052746	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1849	Open in IMG/M
3300026529\|Ga0209806_1181672	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300026538\|Ga0209056_10312182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1072	Open in IMG/M
3300026548\|Ga0209161_10392112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300026555\|Ga0179593_1125429	All Organisms → cellular organisms → Bacteria	3373	Open in IMG/M
3300027748\|Ga0209689_1424027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300027873\|Ga0209814_10313726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300031720\|Ga0307469_10705647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	915	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.30%
Host-Associated	Host-Associated	12.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.30%
Plants	Host-Associated → Plants	12.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1210326022	3300000956	Soil	MSVAELETFLLRIALPPLRLGLYVKRLAARKDHVGAAAVHVELRRTERLRARLARQGWWN
JGI12053J15887_105884302	3300001661	Forest Soil	MTDRDLERFILRIALPPVRLGLYVKRLKARSADRAARTVAIELRRAARIRTRLARAGWWN
Ga0066677_101799481	3300005171	Soil	IALPPVRLGLYVKRLKARRADPAGRRVAIDELLRAARVRRRLARAGWWN*
Ga0066683_100003046	3300005172	Soil	MTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN*
Ga0066683_105019852	3300005172	Soil	MTDGDLGRFLLRIALPPVRLGLYVKRLKARSADPAARTVAIDELRRAARVRRRLARAGWWN*
Ga0066683_107144851	3300005172	Soil	MSETNLERFLLCVALPPVRLGLYVKRLEARRADPAARTVAIDELRRAARIRARLARKGWWN*
Ga0066679_101433853	3300005176	Soil	DLERFLLRIALPPVRLGLYVKRLKARSADPAAWTVAIDELRRAARVRRRLARAGWWN*
Ga0066679_102110022	3300005176	Soil	MTDRDLECFLLHIALPPVRLGLYVKRLKARSADPAARTVVRDELRRAARIRVRIARLGWWN*
Ga0066685_102316271	3300005180	Soil	MTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN*
Ga0066671_100484153	3300005184	Soil	MTDRDLERFLLRIALPPVRLGLYVKRLKARRADPAGRRVAIDELLRAARVRRRLARAGWWN*
Ga0066388_1014780852	3300005332	Tropical Forest Soil	MSEIELERFLLRVALPPLRLGLYVKRLRARRADLSARVVAIDELRRAKRVRARLARQGWWN*
Ga0066388_1020672252	3300005332	Tropical Forest Soil	MSELELERFLLRVALPPLRLGLYVKRLRARRADPAARVVAIEELRRANRVRARLARQGWWN*
Ga0066388_1053591712	3300005332	Tropical Forest Soil	MSDDELERFLLRVALPSVCLGLYVKRVRARRTDPAARIVAIDELRRAARIRARLARQGWWN*
Ga0070705_1000790081	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLKRFLLRVALPPVRLGLYMKRLRVRRADPAARGVAIDELRRAERIRARLARQGWWN*
Ga0070705_1006266661	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLERVLLRVALPPTRLGLYVKRLRARRADPGVRVVAIGELRRAARVRARLARQGWWN*
Ga0070694_1012580181	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSEAELETLLLRIALPPVRHGLYVKRLNARRIDTATADAVRQELRRAERIRARLARQGWWN*
Ga0070708_1000355327	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRTLERFLLRVALPPMRLGLYVKRLRARRADPAARVVAIGELRRAARVRARLARQGWWN*
Ga0070708_1002241272	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDHQLERFLLRVALPPVRLGLYMKRLRMRRADPTARVVAIDEWRRAARVRRRLARQGWWN*
Ga0070708_1002475903	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDEQLERFLLRVALPPMRLGLYVKRLRARRTDPAARVVAIGELRRAARVRARLARQGWWN*
Ga0066681_107418223	3300005451	Soil	MTDGQLVRFLVRIALPPVRLGLYVKHLQARSADPAARVVAIDELRRAARIRVRLARAGWWN*
Ga0070706_10004610111	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GLYLKRLTARRDRAGAAAVNSELRRTERLRARLARQGWWN*
Ga0070706_1016904872	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPDDKLERVLLRVALPPMRLGLYVKRLRARRSDPAARVVAIDELRRAQRVRARLARQGWWN*
Ga0070707_1003688253	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSDEQLERFLLRVALPPMRLGLYVKRLRARRADPAARVVAIDELRRAARVRARLARQGWWN*
Ga0070699_1001116681	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLERFLLRVAPPPTRLGLYLKHLRAKRADPAARVVAIDELRRAERLRARLERSQRGGGRWLRSAH*
Ga0070699_1019133181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLERFLLRVALPPVRLGLYVKHLRARRADPAARVVAIDELRRAERLRARLARQGRWN*
Ga0070697_1002390331	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGELERFQLRIALPPVRLGLYVKRLKARSADPAARTVAVDELRRAARIRVRLARAGWW
Ga0070697_1002837871	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDHQLERFLLRVALPPVRLGLYMKRLRMRRADPTARVVAIDEWRRAA
Ga0070697_1010645991	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLERFLLRVAPPPTRLGLYLKHLRAKRADPAACVVAIDGLRRAERLRARLARQGWWN*
Ga0066697_100618214	3300005540	Soil	MTDGDLGRFLLRIALPPVRLGLYVKRLQARTADPAARTVAIDELRRAARIRRRLARAGWWN*
Ga0070696_1017171322	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSDDQLKRFLLRVALPPVRLGLYMKRLRTRRADPEARVVTIDEWRRAARV
Ga0066695_100456802	3300005553	Soil	MRNIDLERFLLRVALPSVRLGLYVKQLTARCADPAARAVATNELRRAARIRVRLARQGWWN*
Ga0066695_108422902	3300005553	Soil	MTGSRAYSPCTMREIDLERFLLRVALPPVRLGLYLKRLEARTSDPAARTVGIDELRRAARIRVRLTRQGWWN*
Ga0066661_100609434	3300005554	Soil	MTEGDLERFLLRIALPPVRLGLYVKCLKARRADPVARRVAVDELRRVARIRKRLAPAGWWN*
Ga0066692_109351832	3300005555	Soil	RFLLRVALPPVRLGIYVKQLTARRADPAARAVATDELRRAARIRARL*
Ga0066707_107292572	3300005556	Soil	MRGGRAYSPRTMRETDLERFLLRVALPPVRLGLYVKRLEARRADPTARTIAIDELRRTTRIRARMARQGWWN*
Ga0066698_102992181	3300005558	Soil	MTGGRAYSPRTMKKAELERFLLRIALPPVRLGLYVKRLEARRADPAARTVAIDELRRAARIRARLARQGWWN*
Ga0066700_106861312	3300005559	Soil	MTDRGLERFLLRIALPPVRLGLYVKRLEAKIANPAPRTVAIDEMRRAARIRVRLARGRRWN*
Ga0066700_107957331	3300005559	Soil	PVPRPTVSATMTDGELKRFLVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWWN*
Ga0066699_100087863	3300005561	Soil	MSKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN*
Ga0066703_101718373	3300005568	Soil	MTQSDLERFLLRIALPPVRLGLYVKRLKARRADPAGRRVAIDELLRAARVRRRLARAGWWN*
Ga0066705_103784693	3300005569	Soil	MTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLR
Ga0066708_100214475	3300005576	Soil	MTDGELKRFLGRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWWN*
Ga0066708_108373182	3300005576	Soil	MTDGQLERFLVRIALPPVRLGLYVKRLQARSADPAARVVAVDELRRAARIRVRLARAGWWN*
Ga0066691_106679812	3300005586	Soil	MTDRDLECFLLRIALPPVRLGLSVKRLKARSADPAARTVVRDELRRAARIRVRIARLGWWN*
Ga0066706_100577452	3300005598	Soil	MTDGELKRFLVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWWN*
Ga0066903_1083427451	3300005764	Tropical Forest Soil	RIALPPVRLGLYLKRLQTRLADPTVGVVAIDEFRRAARVRARLARQGWWN*
Ga0081455_100316411	3300005937	Tabebuia Heterophylla Rhizosphere	LERFLLRVAPPPLRLGLYVKRLTARRADPSRRAVAIDELQRAVRVGARLARQGWWN*
Ga0066651_100711811	3300006031	Soil	VEPSMTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN*
Ga0066652_1019547361	3300006046	Soil	MRNIDLERFLLSVALPPVRLGLYVKQLTARRADPAARTVAADELRRAARVRARLARQGWWN*
Ga0075417_101266841	3300006049	Populus Rhizosphere	MSEAETFPLRIALPPLRLGLYVKRLAARKDRVGAAAVHRELRHNERLRARLARQGWWN*
Ga0075432_104320812	3300006058	Populus Rhizosphere	MTLTLAWVTPRFANTMSDDQLEGILRRVALPPLRLGIYVKKLAARLTDPAARVVATDELRRAARVGARLARQGWWN*
Ga0066653_101417412	3300006791	Soil	RVEPSMTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN*
Ga0066660_100073497	3300006800	Soil	MTAGDLERFLLRIALPPVRLGLYVKCLKARRADPVARRVAVDELRRVARIRKRLAPAGWWN*
Ga0075421_1024534362	3300006845	Populus Rhizosphere	LARFLLRVALPPMRLGLYVKRLRARRADPAARIVAIDELRRAARVRARLALHGWWN*
Ga0075433_102524593	3300006852	Populus Rhizosphere	MSEAELEAFLLRIALPPVRLGLYVKRLAARRDRVGATAVHSELRRAERLRARLAQQGWWN
Ga0075425_1011531052	3300006854	Populus Rhizosphere	MSSDQLERFLLRVALPPMRLGLYVKRLRARRADPAARVVAIDELRRAKRVRARLARQGWWN*
Ga0075424_1003022782	3300006904	Populus Rhizosphere	MSEAELESFLLRIALPPVRHGLYVKRLEQRRTDPATAEAVRIELRRAERIRVRLARHGWWN*
Ga0075424_1028062941	3300006904	Populus Rhizosphere	MTKAELETFLLHVALPPLRLGLYVKRLRARRADPAGRVVAIDELRRAKRVRARLARQGWWN*
Ga0075419_106625021	3300006969	Populus Rhizosphere	MSDDQLARFLLRVALPPMRLGLYVKRLSARRADPAARVVAIDELRRAARVRARLALHGWWN*
Ga0075435_1019352223	3300007076	Populus Rhizosphere	MSEAELESFLLRIALPPVRHGLYVKRLEQRRTDPATAEAVRIELRRAERIRVRL
Ga0099793_100675063	3300007258	Vadose Zone Soil	MTQGDLERFLLRIALPPVRLGLYVKRLKARRADPAARRVTIDELLRAARVRRRLARAGWWN*
Ga0066710_1001827825	3300009012	Grasslands Soil	MTDGELKRFLVRIALPPVRLGLYVKRFQARRADPAARTVAVDEMRRAARIRMRLARAGWW
Ga0066710_1010334322	3300009012	Grasslands Soil	MTEGELERFLLRLALPPVRLGLYVKRLKARRADPVARRVAVDELRRVARIRKRLAPAGWW
Ga0066710_1037238132	3300009012	Grasslands Soil	MRNIDLERFLLSVALPPVRLGLYVKQLTARRADPAARTVAADELRRAARVRVRLARQGWW
Ga0066710_1038435672	3300009012	Grasslands Soil	MRESDLERFLLRVALPPVRLGVYVKRLKARSANPAARAVAIDELQRVARIRARLARQ
Ga0066709_1002501994	3300009137	Grasslands Soil	MRNIDLERFLLRVALPPVRLGLYVKQLTARCADPAARAVATNELRRAARIRVRLARQGWWN*
Ga0066709_1009973863	3300009137	Grasslands Soil	MTGLTLERFLLRIALPPVRLGLYMKRLEARRADPAAAAVANDELRRAERVRARLARQGWWN*
Ga0066709_1011202263	3300009137	Grasslands Soil	MTEGDLERFLLRIALPPVRLGLYVKCLKARRADPVARRVAVDELRRVARIR
Ga0066709_1021601211	3300009137	Grasslands Soil	MRIIDLERSLFSVALPPVRLGLYVKQLTARRADPEARTVAADELRRAARVRARLARQGWWN*
Ga0066709_1023311701	3300009137	Grasslands Soil	MTQSDLERFLLRIALPPVRLGLYVKRLKARRADPAGRRVATDELLRAARVRRRLARAGWWN*
Ga0114129_104274892	3300009147	Populus Rhizosphere	MSDDQLARFLLRVALPPMRLGLYVKRLRARRADPAARIVAIDELRRAARVRARLALHGWWN*
Ga0114129_105346061	3300009147	Populus Rhizosphere	MSEADLELFLLRIALPPARLAMDLKRLNARRADSTAALVVRNGLRRAARIRARRHA
Ga0114129_122103251	3300009147	Populus Rhizosphere	MTEAQLEAFLLRIAYPPVRLGLYVKRLKARRGDAAAAGAVREELRRAQRIHARLARQGWWN*
Ga0075423_104729214	3300009162	Populus Rhizosphere	MSEAELEAFLLRIALPPVRLGLYVKRLAARRDRVGATAVHSELRRAERLR
Ga0134088_107059471	3300010304	Grasslands Soil	MKKAELERFLLRIALPPVRLGLYVKRLEARRADPAARTVAIDELRRAARIRARLARQGWWN*
Ga0134109_100449422	3300010320	Grasslands Soil	MSKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTLLARQGWWN*
Ga0134071_103339512	3300010336	Grasslands Soil	LRCYGLLQPAVSLVEPPMTKAELETFLLRVAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN*
Ga0126370_101309654	3300010358	Tropical Forest Soil	SEIELERFLLRVALPPLRLGLYVKRLRARRADPSARVVAIDELRRAKRVRARLARQGWWN
Ga0126370_116560592	3300010358	Tropical Forest Soil	MSDDQLARFLLRVALPPMRLGLYVKRLRARRADPAARVVAIDELRRAARVRARLALHGWWN*
Ga0126376_100871402	3300010359	Tropical Forest Soil	MSEDQLDSFLLRIALPPVRLGLYLKRLQTRLADPTVGVVAIDEFRRAARVRARLARQGWWN*
Ga0126376_114152262	3300010359	Tropical Forest Soil	MSDDQLARFLLRVALPPMRLGLYVKRLRARRGDPAARVVAIDELRRAARVRARLALHGWWN*
Ga0126372_117487781	3300010360	Tropical Forest Soil	MSEDQLERFILRVALPPLRMGLYVKRLRARRADPAARAVAIEELRRAKRVRARLARQGWWN*
Ga0137393_112383582	3300011271	Vadose Zone Soil	MTDGELKRFLLLIALPPIRLGLYVKRLKARHADPAARTVALAELRRAARVRRRLARAGWWN*
Ga0137388_111127411	3300012189	Vadose Zone Soil	MTDGELERFLLRIALPPVRLGLYVKRLQARSADPAGRAVAVDELRRAARIHRRLARAGWWN*
Ga0137362_117457862	3300012205	Vadose Zone Soil	MTDGALERFLVRIALPPVRLGLYVKRLQARSADPAARVVAIDELRRAARIRVRLARAGWWN*
Ga0137361_119229012	3300012362	Vadose Zone Soil	MMTDRGLERFLLRIALPPVRLGLYVKRLEAKIANPAPRTVAIDEMRRAARIRVRLARGRR
Ga0137358_100405122	3300012582	Vadose Zone Soil	MTDRGLERFLFRIALPPVRLGLYVKRLEAKIANPAPRTVAIDEMRRAARIRVRLARGRR*
Ga0137397_100587605	3300012685	Vadose Zone Soil	MTDGGLKSFMVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWWN*
Ga0137396_101216011	3300012918	Vadose Zone Soil	HPKVSATMTDGDLECFLLRIALPPVRLGLYVKRLQARSADPAAPTVAVDELRRATRIRVRLARAGWWN*
Ga0137394_102474172	3300012922	Vadose Zone Soil	MTDGDLECFLLRIALPPVRLGLYVKRLQARSADPAAPTVAVDELRRATRIRVRLARAGWWN*
Ga0137419_114482861	3300012925	Vadose Zone Soil	EGDLERFLLRIALPPVRLGLYVKRLKARRADPAARRVTIDELLRAARVRRRLARAGWWN*
Ga0137416_101920001	3300012927	Vadose Zone Soil	MTDGELERFLLRIALPPVRLGLYVKRLKARRADPAARRVTIDELLRAARVRRRLARAGWWN*
Ga0137404_113262531	3300012929	Vadose Zone Soil	MSDHDLERFVLRVALPTVRLGLYVKRLEARHSDPAARAVARNELRRAERVRRRLVRQGWFN*
Ga0137407_121946462	3300012930	Vadose Zone Soil	MRNIDLERFLLRVALPPVRLGLYVKQLTARNADPTARAVANDELRRAARSRARLARQGWWN*
Ga0137410_100264591	3300012944	Vadose Zone Soil	MTDGELKRFLVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAG
Ga0134087_100558643	3300012977	Grasslands Soil	LRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN*
Ga0134081_102756021	3300014150	Grasslands Soil	TFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN*
Ga0137420_10873481	3300015054	Vadose Zone Soil	MTDGELERFLPRIALPPVRLGLYVERLKARSADPTARTVAVDELRRAARFRVRLARAGWWN*
Ga0137420_13569144	3300015054	Vadose Zone Soil	MSDHDLERFLLRVALPPVRLGLYVKRLEARQADPAARTVALGELRRATRVAERLARAGWWN*
Ga0137403_107845292	3300015264	Vadose Zone Soil	MTDSDLERFLLRVALPPVRLGLYVKRLEARRTDPAARTVAVDELRRAARIRARLAREGWWN*
Ga0137403_115724691	3300015264	Vadose Zone Soil	MRQADLERFLLRVALPPVRLGLYVKRLEARRTDPAARAVAIDELRRLARIRARLARQGWWN*
Ga0134073_100765822	3300015356	Grasslands Soil	SMTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN*
Ga0134089_103187041	3300015358	Grasslands Soil	LRCYGLLQPAVSRVEPSMTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN*
Ga0132258_136436971	3300015371	Arabidopsis Rhizosphere	MSDDQLERFLLRVAPPPTRLGLYLKHLRAKRADPAARVVAIDELRRAERLRARLARQGRWN*
Ga0066667_100015647	3300018433	Grasslands Soil	MTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN
Ga0066667_100255045	3300018433	Grasslands Soil	MTDGDLGRFLLRIALPPVRLGLYVKRLKARSADPAARTVAIDELRRAARVRRRLARAGWW
Ga0066667_100696134	3300018433	Grasslands Soil	MTDGELKRFLVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWW
Ga0066667_106082181	3300018433	Grasslands Soil	MTDGQLERFLVRIALPPVRLGLYVKRLQARRADPAARVVAIDELRRAARIRMRLARAGWW
Ga0066669_115468731	3300018482	Grasslands Soil	GRHPRVSATMTDGDLERFLVRIALPPVRLGLYVKRLQARSADPAARVVAIDELRRAARIRVRLARAGWWN
Ga0066669_122412341	3300018482	Grasslands Soil	MTEGDLERFLLRIALPPVRLGLYVKRLKARSADPAGRAVALDELRRAARVRRRLARAGWW
Ga0179594_100315141	3300020170	Vadose Zone Soil	MTDRGLERFLFRIALPPVRLGLYVKRLEAKIANPAPRTVAIDEMRRAARIRVRLARGRR
Ga0207684_100574954	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSDELEVFLLRIALPPARLGLYVKRLNARRADPAAAAVARNELRRAERIRARLARQGWWN
Ga0207684_102694251	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RVLLRVALPPTRLGLYVKRLRARRADPGVRVVAIGELRRAARVRARLARQGWWN
Ga0207684_103218152	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRTLERFLLRVALPPMRLGLYVKRLRARRADPAARVVAIGELRRAARVRARLARQGWW
Ga0207684_110553502	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTEPDLELFLLRIALPPVRLGIYLKRLAARRADPTGAAVVRSELRRAERIHARL
Ga0207646_107216002	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSDDQLERFLLRVALPPMRLGLYVKRLRARRADPAARVVAIDELRRAARVRARLARQGWW
Ga0209471_10069438	3300026318	Soil	MTEGDLERFLLRIALPPVRLGLYVKCLKARRADPVARRVAVDELRRVARIRKRLAPAGWW
Ga0209266_10209971	3300026327	Soil	MTKAELETFLLRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRTRLARQGWWN
Ga0209808_10527462	3300026523	Soil	MTDGDLGRFLLRIALPPVRLGLYVKRLQARSADPAARVVVIDELRRAARIRVRLARAGWW
Ga0209806_11816722	3300026529	Soil	MTDRGLERFLLRIALPPVRLGLYVKCLKARRADPVARRVAVDELRRVARIRKRLAPAGWW
Ga0209056_103121824	3300026538	Soil	MTDGDLGRFLLRIALPPVRLGLYVKRLKARSADPAAWTVAIDELRRAARVRRRLARAGWW
Ga0209161_103921121	3300026548	Soil	LRIAFPPVRLGLYVKRLAARRARGADVRNELRRAERLRARLARQGWWN
Ga0179593_11254291	3300026555	Vadose Zone Soil	MTDRDLERFLLRIALPPVRLGLYVKRLKARSADPAARAVAIDELRRAARVRRRLARAGWW
Ga0209689_14240271	3300027748	Soil	PVPRPTVSATMTDGELKRFLVRIALPPVRLGLYVKRLQARRADPAARTVAVDEMRRAARIRMRLARAGWWN
Ga0209814_103137262	3300027873	Populus Rhizosphere	MSEAETFPLRIALPPLRLGLYVKRLAARKDRVGAAAVHRELRHNERLRARLARQGWWN
Ga0307469_107056471	3300031720	Hardwood Forest Soil	MSDEQLERFLLRVAPPPMRLGLYVKRLRARRTDPAARVVAIGELRRAARVRARLARQGWW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences