Metagenome Family F066547

Basic Information
Family ID	F066547
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	109 residues
Representative Sequence	PQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ
Number of Associated Samples	111
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	97.62 %
% of genes from short scaffolds (< 2000 bps)	93.65 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Most Common Taxonomy
Group	Bacteria (92.063 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.318 % of family members)
Environment Ontology (ENVO)	Unclassified (36.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.968 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.09% β-sheet: 35.46% Coil/Unstructured: 57.45%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.6.1.0: automated matches	d3pxla2	3pxl	0.72716
b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II	d7cohb2	7coh	0.72266
b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II	d2cuaa_	2cua	0.72052
b.6.1.3: Multidomain cupredoxins	d2q9oa2	2q9o	0.71628
b.6.1.0: automated matches	d5n0ka2	5n0k	0.69985

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01161	PBP	40.48
PF03167	UDG	6.35
PF00571	CBS	2.38
PF03734	YkuD	1.59
PF13281	MAP3K_TRAF_bd	0.79
PF01551	Peptidase_M23	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	40.48
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	6.35
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	6.35
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	6.35
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.59
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.59

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.06 %
Unclassified	root	N/A	7.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.06 %
Unclassified	root	N/A	7.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.06 %
Unclassified	root	N/A	7.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.92 %
Unclassified	root	N/A	7.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	84.92 %
Unclassified	root	N/A	7.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.92 %
Unclassified	root	N/A	7.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002076\|JGI24749J21850_1024375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300004480\|Ga0062592_101322556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300004480\|Ga0062592_102061537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300005093\|Ga0062594_100987606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300005093\|Ga0062594_101886590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300005328\|Ga0070676_11196259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005335\|Ga0070666_10318915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300005339\|Ga0070660_101512429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005347\|Ga0070668_101036728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300005356\|Ga0070674_100831665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300005364\|Ga0070673_100809302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300005366\|Ga0070659_101757274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005406\|Ga0070703_10514666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005437\|Ga0070710_11511143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005438\|Ga0070701_10310554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005438\|Ga0070701_10335109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300005440\|Ga0070705_100906054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300005468\|Ga0070707_101211974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300005468\|Ga0070707_101906910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005518\|Ga0070699_101947165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005539\|Ga0068853_100204612	Not Available	1797	Open in IMG/M
3300005545\|Ga0070695_100137222	Not Available	1692	Open in IMG/M
3300005545\|Ga0070695_101459498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005546\|Ga0070696_100346079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300005546\|Ga0070696_101669580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005564\|Ga0070664_100442348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300005618\|Ga0068864_100595132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300005719\|Ga0068861_100244237	Not Available	1529	Open in IMG/M
3300005764\|Ga0066903_107880185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005834\|Ga0068851_10914385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005842\|Ga0068858_100531524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300005937\|Ga0081455_10042562	All Organisms → cellular organisms → Bacteria	3982	Open in IMG/M
3300006032\|Ga0066696_10734070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006844\|Ga0075428_101644818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300006852\|Ga0075433_10359498	Not Available	1286	Open in IMG/M
3300006853\|Ga0075420_101192450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300006864\|Ga0066797_1314479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300006880\|Ga0075429_101841925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300006918\|Ga0079216_10474321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300007076\|Ga0075435_100098500	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300009094\|Ga0111539_11104915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300009143\|Ga0099792_10770991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300009162\|Ga0075423_10870063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300009176\|Ga0105242_12152356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300009553\|Ga0105249_13300093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300009792\|Ga0126374_10375291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300010043\|Ga0126380_11655570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300010046\|Ga0126384_10552030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300010047\|Ga0126382_12129391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300010304\|Ga0134088_10209659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300010329\|Ga0134111_10381359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010358\|Ga0126370_11763440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300010399\|Ga0134127_11100601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300010400\|Ga0134122_11189497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300010400\|Ga0134122_12943808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010401\|Ga0134121_10236730	Not Available	1592	Open in IMG/M
3300010401\|Ga0134121_11363077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300010401\|Ga0134121_12553269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300011119\|Ga0105246_10686737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300011270\|Ga0137391_10330134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300011271\|Ga0137393_11041591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012204\|Ga0137374_10042249	All Organisms → cellular organisms → Bacteria	4811	Open in IMG/M
3300012353\|Ga0137367_10356612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300012353\|Ga0137367_10495588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300012354\|Ga0137366_11018328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300012354\|Ga0137366_11073765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300012355\|Ga0137369_10210996	Not Available	1494	Open in IMG/M
3300012360\|Ga0137375_11352936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012494\|Ga0157341_1030725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012510\|Ga0157316_1082678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012684\|Ga0136614_10009240	All Organisms → cellular organisms → Bacteria → Proteobacteria	6859	Open in IMG/M
3300012930\|Ga0137407_11996986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012955\|Ga0164298_11538535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012957\|Ga0164303_11389888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300012957\|Ga0164303_11449040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012961\|Ga0164302_11396615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300012972\|Ga0134077_10205032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300012986\|Ga0164304_11678961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012987\|Ga0164307_10570138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300013297\|Ga0157378_10260952	Not Available	1662	Open in IMG/M
3300013297\|Ga0157378_11018104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300013306\|Ga0163162_11234807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300013308\|Ga0157375_10729023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300014829\|Ga0120104_1007991	Not Available	1858	Open in IMG/M
3300014885\|Ga0180063_1106881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300015373\|Ga0132257_102411994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300015374\|Ga0132255_104970889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300017792\|Ga0163161_10237964	Not Available	1415	Open in IMG/M
3300018053\|Ga0184626_10105697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300018056\|Ga0184623_10385159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300018063\|Ga0184637_10253196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300018071\|Ga0184618_10225625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300018075\|Ga0184632_10007207	All Organisms → cellular organisms → Bacteria → Proteobacteria	4636	Open in IMG/M
3300018075\|Ga0184632_10290542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300018077\|Ga0184633_10031061	All Organisms → cellular organisms → Bacteria	2681	Open in IMG/M
3300018078\|Ga0184612_10538273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300019888\|Ga0193751_1154954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300022534\|Ga0224452_1161381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300022694\|Ga0222623_10228204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300025324\|Ga0209640_10103162	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300025899\|Ga0207642_10476882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300025910\|Ga0207684_11258940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300025911\|Ga0207654_10264920	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300025933\|Ga0207706_10816736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300025961\|Ga0207712_11990508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300025972\|Ga0207668_10921272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300026035\|Ga0207703_12330846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300026088\|Ga0207641_10561296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300027395\|Ga0209996_1052639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300027639\|Ga0209387_1017039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300027731\|Ga0209592_1159525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300027873\|Ga0209814_10318441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300028381\|Ga0268264_11951299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300031366\|Ga0307506_10031573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1420	Open in IMG/M
3300031562\|Ga0310886_10355610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300031720\|Ga0307469_10264061	Not Available	1395	Open in IMG/M
3300031720\|Ga0307469_11363075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031820\|Ga0307473_10809640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300031965\|Ga0326597_11362687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300032076\|Ga0306924_12202280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300032180\|Ga0307471_103371382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300033004\|Ga0335084_10807872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300033513\|Ga0316628_100068609	All Organisms → cellular organisms → Bacteria → Proteobacteria	3803	Open in IMG/M
3300033803\|Ga0314862_0192897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300033814\|Ga0364930_0239587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300034165\|Ga0364942_0104316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.08%
Host-Associated	Host-Associated	34.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.76%
Plants	Host-Associated → Plants	34.92%
Aquatic	Environmental → Aquatic	10.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.29%
Sediment	Environmental → Aquatic → Sediment	8.73%
Freshwater	Environmental → Aquatic → Freshwater	1.59%
Floodplain	Environmental → Terrestrial → Floodplain	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.70%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.17%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24749J21850_10243751	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	APPDGPQTVMISVRAWNFDPGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0062592_1013225561	3300004480	Soil	EEDAAPPATQTLTIHVRAWDFSPGGPNSPPIVLTVGQTYQFVFVNVDAPGTPSPRHGFSGISDLGLPGTDDISPGHDVTLPPFTPQPFQRGTHPFICTQNDCGGDPEQHRGMQGNIVIQ*
Ga0062592_1020615371	3300004480	Soil	GAEDVPAPGAETVMINVRAWDFAPGGPNSPPLVLTAGTTYALVFHNVDPPGTTNPRHGFSGISDLGLAATDDISPGHDFVIPSFTPQPYQRGTHPFSCTQNECGGDPEQHRGMQGILVIQ
Ga0062594_1009876061	3300005093	Soil	VPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPWFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0062594_1018865902	3300005093	Soil	DGPQTVMISVRAWNFDPGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0070676_111962592	3300005328	Miscanthus Rhizosphere	TDPSFVAGAEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0070666_103189151	3300005335	Switchgrass Rhizosphere	QIVISVHTWDFSPGGPVSAPLRLQVGTAYTLVFHNVDLPSTVNPQHGFSGISELGIPATDDISPGHDFVVPAFTLQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0070660_1015124293	3300005339	Corn Rhizosphere	LVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0070668_1010367283	3300005347	Switchgrass Rhizosphere	PQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0070674_1008316651	3300005356	Miscanthus Rhizosphere	LVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0070673_1008093021	3300005364	Switchgrass Rhizosphere	VISVHTWDFSPGGPVSAPLRLQVGTAYTLVFHNVDVPSTPNPQHGFSGISELGIPATDDISPGHDFVVPAFTPQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0070659_1017572742	3300005366	Corn Rhizosphere	SPAIVLQVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGSDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0070703_105146662	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0070710_115111431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SGTETITINVKAWDFNPGGPVSPAIVLKVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQPFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0070701_103105543	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0070701_103351093	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPWFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0070705_1009060543	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0070707_1012119741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AWDFSPGGPVSSPLRLTVGTTYTLIFRNVDSPGTPNPRHGFSGISDLGLPSTDDISPGHDFTITDFTPLPYQRGTYPFVCTQNDCGGDPEQHNGMMGALIIE*
Ga0070707_1019069101	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LQVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0070699_1019471652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FVVAAKDQAAPAAQTLVISVRAWDFSPGGPVSAPLTLKVGGTYTLVFRNSDSPGTPNARHGFSGISDLGLPSSDDISPGHDFVIPSFAPQGYQRGSYPFVCTQNDCGGDPEQHNGMIGLLIVE*
Ga0068853_1002046124	3300005539	Corn Rhizosphere	PGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0070695_1001372224	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FTYAAVIDNATTDPSFVAGAEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0070695_1014594981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PPMTLRVGTTYMLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0070696_1003460791	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QTITINVKAWDFNPGGPVSQPIILKVGTTYRLVFHNVDTVETTNPRHGFSGISDLGLPGSDDITLGRPDFVIPSFTPQPSQRNSYPFTCTNNECGGDPQQHAGMVGLLIIQ*
Ga0070696_1016695802	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TVMVSVHAWDFSPGGPVSSPLRLTVGTTYTLIFRNVDSPGTPNPRHGFSGISDLGLPSTDDISPGHDFTITDFTPLPYQRGTYPFVCTQNDCGGDPEQHNGMMGVLIIE*
Ga0070664_1004423484	3300005564	Corn Rhizosphere	ASPPQAGPETLVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSSCGGDPEQHAGMIGLLVVE*
Ga0068864_1005951323	3300005618	Switchgrass Rhizosphere	PISPPLTLEVGVTYTLVFHNVDVPGTVNARHGFSGISELGLPSTDDISAGHDFVIPSFTPQAYQRGAHPFVCTQSDCGGDPEQHAGMIGSLIVQ*
Ga0068861_1002442374	3300005719	Switchgrass Rhizosphere	PPPPAGPETLVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADQPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0066903_1078801851	3300005764	Tropical Forest Soil	WDFNPGGPVSQALVLKVGTNYRLVFHNVDSPQTTNPRHGFSGISDLGLPGTDNIELGKPDFVIPSFTPQPFQRNTYPFACTNNDCGGDPEQHAHMLGLLIIE*
Ga0068851_109143852	3300005834	Corn Rhizosphere	LVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSAVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0068858_1005315243	3300005842	Switchgrass Rhizosphere	VPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPWFTPLAFQRGPHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0081455_100425622	3300005937	Tabebuia Heterophylla Rhizosphere	VRAWDFSPGGPVSPPLTLRVGTTYTLIFRNVDLPGTPSPRHGFSGVSELGLPSTGDISPGHDFVTPSFTPEAWQRGTYPFVCTQSDCGGDPEQHAGMLGLLVVE*
Ga0066696_107340702	3300006032	Soil	YGAVIDNATADGSFVSGAEDEPSPAPQTIIVNVKAWDFSPGGPNSPPLVLNVGTTYVLVFHNVDLPGTPSPRHGFSGISELGLSGTDDISPGHDVTLAPFTPQPFQRGTYPFACTQNECGGDPEQHRGMQGNVIVQ*
Ga0075428_1016448181	3300006844	Populus Rhizosphere	SPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPEAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0075433_103594981	3300006852	Populus Rhizosphere	VFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0075420_1011924501	3300006853	Populus Rhizosphere	SPGGPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0066797_13144791	3300006864	Soil	INVKAWDFNPGGPVSPSLVLKVGTTYRLVFHNADSPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQAFQRNVYPFACTNNDCGGDPQQHAGMVGFLIIE*
Ga0075429_1018419251	3300006880	Populus Rhizosphere	YGAVIDNATADSSFVAGQEDVAAPDARTLTIEVRAWDFSPGGPNSPPIVLTVGQTYRFVFVNVDSPGTPSPRHGFSGISDLGLPGTDDISPGHDVVLPPFTPQPFQRGTHPFICTQNDCGGDPEQHRGMQGNIVIQ*
Ga0079216_104743211	3300006918	Agricultural Soil	DSSFVAGDEDVPPPAGPLTLTINVRAWDFSPGGPNSPPIVLTVGQTYQIVFHNVDLPGTASPRHGFSGISDLGLPGTDDISPGRDVTLPTFTPQPFHRGTHPFICTQNDCGGDPEQHRGMQGSIVIQ*
Ga0075435_1000985001	3300007076	Populus Rhizosphere	LFTYAAVIDNATADASFVPGAEDERGPEPQTITVNVKAWDFSPGGPNSPPLVLTVGTTYILVFHNVDSPGTPNPRHGFSGISDLGLSGTDDISPGHDVTLPPFTPQPFQRGTYPFSCTQNECGGDPEQHRGMQGNILIQ*
Ga0111539_111049151	3300009094	Populus Rhizosphere	APPPPAGPETLVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADQPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0099792_107709911	3300009143	Vadose Zone Soil	SPSPTPTPPSGTQTITINVKAWDFSPGGPVSPAIVLQVGTTYRLVFHNADTPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQPFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0075423_108700631	3300009162	Populus Rhizosphere	GAEDQRAAAPVSITVNVRAWDFSPGGPNSPPLVLDVGTAYTLTFHDVDPPGTTNPRHGFPGISELGLPGNDDISPGHDFVIPSFTPQAFQRGTHPFACTREDCGGDPEQHRGMMAAIVIR
Ga0105242_121523562	3300009176	Miscanthus Rhizosphere	VGTAYTLVFRNADQPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0105249_133000931	3300009553	Switchgrass Rhizosphere	TYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0126374_103752913	3300009792	Tropical Forest Soil	SGPQEIVISVKAWDFSPGGPVSSPLRLSVGTTYRLVFRDVDLPETPNPRHGFTGISELGLPETHDIFAGHDFVIPSFTPQPFQRGTYAFGCTETECGGDPEQHNGMIGLLIVE*
Ga0126380_116555702	3300010043	Tropical Forest Soil	SKDLAAPPGFNPPTPTPGAGIQTITINVKAWDFSPGGPVSQALVLKVGTTYRLVFHTVHSPQTTNPRHGFSGISDLGLPGTDNIELGKPDFVIPSFTPQAFQRNTYPFACTNNDCGGDPEQHAHMIGLLIIE*
Ga0126384_105520301	3300010046	Tropical Forest Soil	PGGPVSQALVLKVGTTYRLVFHNVDSPQTTNPRHGFSGISELGLPATDNIELGKPDFVIPSFTPQAFQRNTYFFTCTNNDCGGDPEQHVHMIGLLIIE*
Ga0126382_121293912	3300010047	Tropical Forest Soil	WDFSPGGPVSPPLVLQVGVSYTLVFRNVDPPGTPNARHGFSGISELGLPPTDDISAGHDFVVSAFTPQAFQRGTYPFACTRSDCGGDPEQHAGMIGSLNVQ*
Ga0134088_102096593	3300010304	Grasslands Soil	MLTAGTTYTIVFHNVDPEGTTNPRHGFPGISELGLPGNDDISPGHDFVIPSFTPQAFQRGTHPFSCTREDCGGDPEQHRGMIGTIVIQ*
Ga0134111_103813591	3300010329	Grasslands Soil	PPIVLKVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIEFGKADFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIVE*
Ga0126370_117634401	3300010358	Tropical Forest Soil	GTTYRLVFHNVDLPDTPNPRHGFSGVSDLGLPATNNISAGVDFVIPSFTPQPYQRGTYPFMCTEVDCGGDPEQHNGMIGLLIIQ*
Ga0134127_111006011	3300010399	Terrestrial Soil	TLVISVRAWDFSPGGPISPPMSLRVGTTYSLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE*
Ga0134122_111894971	3300010400	Terrestrial Soil	GAEDEPAPEAQTVVINVRAWDFGPGGPNSPPLVLTAGTTYTLVFHNVDPPGTTNPRHGFSGISDLGLPATDDISPGHDFVIPSFTPQPYQRGTHPFSCTQNECGGDPEQHRGMQGILVIE
Ga0134122_129438082	3300010400	Terrestrial Soil	INVRAWDFNPGGPVSPSLVLKVGTTYRLVFHNADTPQTTNPRHGFSGISDLGLPGTDNIEFGKADFVIPSFTPQAFQRNIYPFSCTNNDCGGDPQQHAGMIGVLIIE*
Ga0134121_102367301	3300010401	Terrestrial Soil	WNFDPGGPISPPLVLKAGVTYTLIFHNVDVPGTPNPRHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0134121_113630771	3300010401	Terrestrial Soil	TRTPTPISQSPTPTPTPPSGTQTITINVKAWDFSPGGPVSPAIVLQVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGSDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0134121_125532691	3300010401	Terrestrial Soil	PTPTPTPPSGTETITINVKAWDFNPGGPVSPAIVLKVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQPFQRNAYPFACTNNDCGGDPQQHAGMVGFLVIE*
Ga0105246_106867371	3300011119	Miscanthus Rhizosphere	DEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0137391_103301343	3300011270	Vadose Zone Soil	PTPTSPPGIQTITINVKAWDFSPGGPVSPALVLNVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGSDNIALGAADFVIPSFTPQPSQRNSYPFTCTNNECGGDPQQHASMIGFLIIQ
Ga0137393_110415911	3300011271	Vadose Zone Soil	VGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIEFGKPDYVIPSFTPQVFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0137374_100422496	3300012204	Vadose Zone Soil	VTPTRTPTPGGALTITINVRAWDFNPGGPVSAPLVLTVGTTYKLVFHNVDGPLVENARHGFTGIPELSLPGTVSIARGEPDFVIDNITLQPSQRGFYPFSCTNNNCGGDPQQHAGMNGILIVQ*
Ga0137367_103566121	3300012353	Vadose Zone Soil	AAVIDNATSDSSFVSGAEDERGPEPQTITVNVKAWDFSPGGPNSPPLVLSVGTTYILVFHNVDSPGTPSPRHGFSGISELGLSGTDDISPGHDVTLAPFTPQPFQRGTYPFICTQNECGGDPEQHRGMQGNILIQ*
Ga0137367_104955883	3300012353	Vadose Zone Soil	FNPGGPSSPALVLKVGTTYRLVFHNVDSPQTTNPRHGFSGISELGLPSSDNIALGEADFVIPSFTPQSSQRNSYPFTCTNNDCGGDPQQHAGMVGFLIIQ*
Ga0137366_110183282	3300012354	Vadose Zone Soil	IDNATSDSSFVSGAEDERGPEPQTITVNVKAWDFSPGGPNSPPLVLSVGTTYILVFHNVDSPGTPSPRHGFSGISELGLSGTDDISPGHDVTLAPFTPQPFQRGTYPFICTQNECGGDPEQHRGMQGNILIQ*
Ga0137366_110737651	3300012354	Vadose Zone Soil	QTITINVKAWDFSPGGPVSPALVLKVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGSDDIELGKPDFVIPSFTPLPFQRNSYPFTCTNNDCGGDPQQHAGMIGLLIIE*
Ga0137369_102109961	3300012355	Vadose Zone Soil	VKAWDFSPGGPNSPPLVLTVGATYVLVFHNVDPPGTPSPRHGFSGISDLGLAGTDDIFPGHDVVLAPFTPQPFQRGTYPFLCTQNDCGGDPEQHRGMLGNILIQ*
Ga0137375_113529361	3300012360	Vadose Zone Soil	LILKVGTTYRLVFHNVDTPQTENPRHGFSGISDLGLPANDNIAFGQPDFVIPSFTPQPFQRNSYPFTCTNNDCGGDPQQHVGMIGLLIIE*
Ga0157341_10307252	3300012494	Arabidopsis Rhizosphere	IDNATTDPSFVAGAEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFQITGFTPQGYQRGTYPFVCTQNNCGGDPEQHNGMVGMLIIE*
Ga0157316_10826781	3300012510	Arabidopsis Rhizosphere	AEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0136614_100092401	3300012684	Polar Desert Sand	TTYRLVFRNVDLPGTANPRHGFSGISDLGLPGTNDIALGAPDFVIPSFAPQPFQRGTHPFVCTQNDCGGDPEQHAGMVGTLIIE*
Ga0137407_119969861	3300012930	Vadose Zone Soil	TPPSGTETITINVKAWDFSPGGPVSPAIVLKVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIELGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0164298_115385351	3300012955	Soil	LFTYAAVIDNATTDPSFVAGAEDETVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDAPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0164303_113898881	3300012957	Soil	GAPAAAQIVISVHTWDFSPGGPVSAPLRLQVGTAYTLVFHNVDLPSTVNPQHGFSGISELGIPATDDISPGHDFVVPAFTLQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0164303_114490401	3300012957	Soil	TPTATPPSGTQTITINVKAWDFNPGGPVSPAIVLQVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGSDNIEFGRPDFVIPSFTPQAFQRNVYPFACTNNDCGGDPQQHAGMVGFLIIQ*
Ga0164302_113966151	3300012961	Soil	ADTPQTTNPRHGFSGISDLGLPGNDNIEFGKADFVIPSFTPQAFQRNIYPFACTNNDCGGDPQQHAGMIGVLVIE*
Ga0134077_102050323	3300012972	Grasslands Soil	FSPGGPNSPPLILTAGTTYTLTFHNVDPEGTTNPRHGFPGISELGLPGNDDISPGHDFVIPSFTPQAFQRGTHPFSCTREDCGGDPEQHRGMIGTIVIQ*
Ga0164304_116789612	3300012986	Soil	SLVLKVGTTYRLVFHNADTPQTTNPRHGFSGISDLGLPGNDNIEFGKADFVIPSFTPQAFQRNIYPFACTNNNCGGDPEQHAKMMGVLVIE*
Ga0164307_105701383	3300012987	Soil	VAGAADQAAPAAAQQVVISVHTWDFSPGGPVSAPLRLQVGTAYTLVFHNVDVPSTPNPQHGFSGISELGIPATDDISPGHDFVVPAFTLQPYQRGTYPFACTRNDCGADPEQHAGMRRTTIVE*
Ga0157378_102609524	3300013297	Miscanthus Rhizosphere	VVGAEDPAPPDGPQTVMISVRAWNFDPGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPRDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ*
Ga0157378_110181043	3300013297	Miscanthus Rhizosphere	AWDFSPGGPVSAPLRLQVGTAYTLVFHNVDLPSTLNPQHGFSGISELGIPATDDISPGHDFVVPAFTLQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0163162_112348071	3300013306	Switchgrass Rhizosphere	YTLVFHNVDLPSTVNPQHGFSGISELGIPATDDISPGHDFVVPAFTPQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0157375_107290233	3300013308	Miscanthus Rhizosphere	PLFTYAAVIDNATTDPSFVAGAEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ*
Ga0120104_10079911	3300014829	Permafrost	SAPLTLKVGTQYTLIFRNVDLPGTPNPRHGFSGVSDLGLPSTDDISPGHDFVISSFTPQDYQRGTYPFVCTQNDCGGDPEQHNGMVGALIIE*
Ga0180063_11068811	3300014885	Soil	NSPPLTLTVGTTYVLVFHNVDLPGTTNPRHGFAGISELGLPGTDDISPGHDVVMPAFTPQPFQRGTHPFSCTQENCGGDPEQHRGMAGAIIIQ*
Ga0132257_1024119941	3300015373	Arabidopsis Rhizosphere	TATLTPTPAPAVTVVIGVRAWDFSPGGPVSPPLILQVGVTYSLVFRNVDAPGTVNARHGFSGISELGLPSTDDISAGHDFVIPSFTPQAYQRGAHPFVCTQSDCGGDPEQHAGMIGSLIVQ*
Ga0132255_1049708892	3300015374	Arabidopsis Rhizosphere	YTLVFHNVDVPSTPNPQHGFSGISELGIPATDDISPGHDFVVPAFTPQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE*
Ga0163161_102379644	3300017792	Switchgrass Rhizosphere	TPPAGPETLVISVRAWDFSPGGPISPPMTLRVGTIYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSSCGGDPEQHAGMIGLLVVE
Ga0184626_101056973	3300018053	Groundwater Sediment	DVPAPDGPQVITINVKAWDFSPGGPNSPPLFLTAGASYTLVFHNVDSPETTNPRHGFSGISDLGLPGTDDISPGHDFVIPSFTPQPFHRGTHPFSCTQNECGGDPEQHRGMQGNIVIQ
Ga0184623_103851592	3300018056	Groundwater Sediment	VLVSVRAWDFSPGGPVSAPLTLEAGTTYTLIFHNVDNPGTPNPRHGFSGISDLGLPSTDDISPGHDFVISDFTPQDYQRGTYPFVCTQNDCGGDPEQHNGMVGTLIIQ
Ga0184637_102531961	3300018063	Groundwater Sediment	GTNYRLVFHNVDSAGTPNPVHGFSGISDLGLPGSNDISPGNDFVIPSFTPEAFQGGTHPFVCTQNSCGGDPEQHAGMIGNLIIE
Ga0184618_102256251	3300018071	Groundwater Sediment	TADSSFVSGEEDVPAPAAQVITIDVRAWNFSPGGPNSPPLVLTAGTTYTLVFHNVDPPGTTNPRHGFSGISDLGLPATDDISPGHDFVIPSFTPQPYQRGTHPFSCTQNECGGDPEQHRGMQGILVIE
Ga0184632_100072071	3300018075	Groundwater Sediment	IDNTTADSSFVAGDEDVPAAAQMITINVKAWDFSPGGPNSPPLFLTAGATYTLVFHNVDSPETTNPRHGFSGISDLGLPGTDDISPGHDFVIPSFTPQPFHRGTHPFSCTQNECGGDPEQHRGMQGSIVIQ
Ga0184632_102905421	3300018075	Groundwater Sediment	IDNTTADSSFVAGDEDVPAAAQMITINVKAWDFSPGGPNSPSLFLTAGASYTLIFHNVDSPQTTNPRHGFSGISDLGLPGTDDISPGHDFVIPSFTPQPFHRGTHPFSCTQNECGGDPEQHRGMQGSIVIQ
Ga0184633_100310616	3300018077	Groundwater Sediment	QTVTIDVRAWDFSPGGPVSAPLILQAGTTYRLVFHNVDSASTPNPRHGFSGISDLGLPGSNDISPGKDFVIPSFTPQPFQRGTHPFLCTQNDCGGDPEQHAGMVGNLIIQ
Ga0184612_105382731	3300018078	Groundwater Sediment	TYTLIFHNVDNPGTPNPRHGFSGISDLGLPSTDDISPGHDFVISDFTPQGYQRGTYPFVCTQNDCGGDPEQHNGMVGTLIIQ
Ga0193751_11549542	3300019888	Soil	GKAWDFSPGGPVSPAIVLKVGTTYRLVFHNVDTPQTTNPRHGFSGISDLGLPGNDNIEFGKADYVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ
Ga0224452_11613812	3300022534	Groundwater Sediment	APLFTYAAVIDNATSDPSFVSGAEDEPAPEAQKITIDVRAWDFSPGGPNSPPLVLTAGATYTLVFHNVDSPETTNPRHGFSGISDLGLPGTDDISPGHDFVIPSFTPQAFHRGTHPFSCTQNECGGDPEQHRGMQGSIVIE
Ga0222623_102282043	3300022694	Groundwater Sediment	FSPGGPNSPPLVLTAGATYTLVFHNVDSPETTNPRHGFSGISDLGLPGTDDISPGHDFVIPSFTPQAFHRGTHPFSCTQNECGGDPEQHRGMQGSIVIE
Ga0209640_101031621	3300025324	Soil	TADSSFVAGDEDVPPPAGPITLTINVRAWDFSPGGPNSPPIVLTVGQTYQFVFHNVDLPGTTNPRHGFSGISDLGLPGTDDISPGHDVTLPPFTPQAFQRGTHPFICTQNDCGGDPEQHRGMQGNIVIQ
Ga0207642_104768821	3300025899	Miscanthus Rhizosphere	TLVISVRAWDFSPGGPISPPMTLRVGTTYTLVFRNADQPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE
Ga0207684_112589401	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SQPLRLTVGTTYRLVFHNVDVPGTPNARHGFSGLSDLGLPEANDISAGHDFVIESFTPQAFQRGSYPFSCTETDCGGDPEQHNGMIGILIVE
Ga0207654_102649203	3300025911	Corn Rhizosphere	TDPIFVVGAEDPAPPDGPQTVMISVRAWNFDPGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ
Ga0207706_108167361	3300025933	Corn Rhizosphere	YAAVIDNATTDPSFVAGAEDEPVPQPQTVTINVKAWDFSPGGPNSPALMLTVGTTYTLVFHNVDTPGTPNPRHGFSGISDLGLPASDDISPGHDFVIPSFTPLAFQRGSHPFSCTQNECGGDPEQHRGMQGILVIQ
Ga0207712_119905082	3300025961	Switchgrass Rhizosphere	TYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE
Ga0207668_109212723	3300025972	Switchgrass Rhizosphere	TAYTLVFRNADQPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPQAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE
Ga0207703_123308462	3300026035	Switchgrass Rhizosphere	QVGTAYTLVFHNVDVPSTPNPQHGFSGISELGIPATDDISPGHDFVVPAFTPQPYQRGTYPFACTRNDCGADPEQHAGMRGTIIVE
Ga0207641_105612963	3300026088	Switchgrass Rhizosphere	VRAWNFDPGGPVSPPLILKAGVTYTLIFHNVDVPGTPNPQHGFSGVSDLGLPSTDNISPGHDFQITGFTPKDYQRGTYPFLCTQNDCGGDPEQHNGMIGSLIIQ
Ga0209996_10526391	3300027395	Arabidopsis Thaliana Rhizosphere	PIFVIGVEDERAPAPQTVTINVRAWDFSPGGPNSPPLTLTVGTTYVLVFHNVDLPGTTNPRHGFAGISELGLPGTDDISPGHDVVMPAFTPQPFQRGTHPFSCTQESCGGDPEQHRGMAGAIIIQ
Ga0209387_10170393	3300027639	Agricultural Soil	DFSPGGPNSPPIVLTVGQTYQFVFRNVDLAGTTSPRHGFSGISDLGLSGTDDISPGHDVTLPPFTPQPFHRGTHPFICTQNDCGGDPEQHRGMQGQIVIQ
Ga0209592_11595253	3300027731	Freshwater Sediment	GGPVSAPLTLRVGTTYTLVFRNVDLPGTPNARHGFSGVSDLGLPPTDDISPGHDFVIPAFTPQAYQRGSYPFVCTQSDCGGDPEQHAGMIGALIVE
Ga0209814_103184413	3300027873	Populus Rhizosphere	PQEIVISVKAWDYSPGGPVSSPLRLSVGTAYRLVFRNVDSPGTPNPRHGFTGISELGLPETHDISAGHDFVIPSFTPQPYQRGSYAFACTESDCGGDPEQHAGMHGLIIIE
Ga0268264_119512991	3300028381	Switchgrass Rhizosphere	GGPVSPSLVLKVGTTYRLVFHNVDLPGTTNPRHGFSGISDLGLPGNDNIASGKPDFIIPSFTPQAFQRNIYPFSCTNNDCGGDPEQHAGMIGVLIIE
Ga0307506_100315733	3300031366	Soil	PSPIPGPAVTIVIGVRAWDFSPGGPVSPPLTLQVGVTYTLVFHNVDAPGTVNARHGFSGISELGLASTDDISAGHDFVIPSFTPQAYQRGAHPFVCTQSNCGGDPEQHAGMIGSLIVQ
Ga0310886_103556103	3300031562	Soil	GPISPPMTLRVGTTYTLVFRNADLPGTVGARHGFSGVSELGLPATDDISPGHEFVIPAFTPEAWQRGNYPFVCTQSGCGGDPEQHAGMIGLLVVE
Ga0307469_102640614	3300031720	Hardwood Forest Soil	SGTQTITINVKAWDFSPGGPVSPAIVLQVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIE
Ga0307469_113630751	3300031720	Hardwood Forest Soil	TNTPVPTPTPTAPPGVQTITINVKAWDFNPGGPVSQPMILRVGTTYRLVFHNVDTAGTTNPRHGFSGISDLGLPGSDDITLGMPDFVIPSFTPQASQRNSYPFTCTNNECGGDPQQHAGMVGLLIIQ
Ga0307473_108096401	3300031820	Hardwood Forest Soil	AIVLQVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGNDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLIIQ
Ga0326597_113626871	3300031965	Soil	GGPNSPPLSLAAGTTYVLTFHNVDAPGTTNPRHGFSGISDLGLPGTDDISPGHDVTLPPFTPQAFHRGTHPFICTQNDCGGDPEQHRGMQGSIIIQ
Ga0306924_122022801	3300032076	Soil	GVTYTLIFHNVDTPGTPNPQHGFSGVSDLGLPPTDNISPGHDFQITGFAPQDYQRGTYPFVCTQNDCGGDPEQHNGMIGSLIIQ
Ga0307471_1033713821	3300032180	Hardwood Forest Soil	QVGTTYRLVFHNVDSPQTTNPRHGFSGISDLGLPGSDNIEFGKPDFVIPSFTPQAFQRNAYPFACTNNDCGGDPQQHAGMVGFLVIQ
Ga0335084_108078721	3300033004	Soil	ISAPLVLQAGVTYTLVFHDVDPPGTVNPRHGFSGISELGLPSTDDISAGHDFVIPSFTPQAYERGTHPFVCTNVNCGGDPEQHTGMVGSLVIQ
Ga0316628_1000686091	3300033513	Soil	DPIFVPGAEDEAGPPVPQTITINVRAWDFSPGGPNSPPLTLTAGTAYVLVFHDVDPPGTTNPRHGFSGISELGLPATDDISPGHDFVTPVFTPQDFQRGVHPFNCTQNECGGDPEQHRGMVGMIIVQ
Ga0314862_0192897_235_507	3300033803	Peatland	PLTLTVGTTYTLIFHNVDLPGTPNPQHGFSGVSDVGLPPTDNISPGHDFIVPSFTPLPYQRGAYPFVCTQSNCGGDPEQHNGMIGLLIIQ
Ga0364930_0239587_5_319	3300033814	Sediment	VRAWDFSPGGPNSPPIVLTVGQTYQFVFHNVDLPGTTSPRHGFSGISDLGLPGTDDISPGHDVTLPSFSPQPFQRGTHPFICTQNDCGGDPEQHRGMQGNIVIQ
Ga0364942_0104316_508_918	3300034165	Sediment	YAAVIDNATSDPALVAGVEDERAPEAQTVTIDVKAWDFSPGGPNSPALVLTAGTTYTLIFHNVDSPETTNPRHGFSGISDLGLPGTEDISPGHDFIIPSFTPQPFHRGTHPFSCTQNECGGDPEQHRGMQGTIIIQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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