Metagenome / Metatranscriptome Family F066353

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066353
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	48 residues
Representative Sequence	ALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTVPD
Number of Associated Samples	82
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.111 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (70.635 % of family members)
Environment Ontology (ENVO)	Unclassified (84.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (70.635 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 64.44% Coil/Unstructured: 35.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF05988	DUF899	50.79
PF00106	adh_short	12.70
PF13561	adh_short_C2	4.76
PF06736	TMEM175	3.17
PF01872	RibD_C	3.17
PF08281	Sigma70_r4_2	1.59
PF13649	Methyltransf_25	1.59
PF13586	DDE_Tnp_1_2	0.79
PF17197	DUF5134	0.79
PF07883	Cupin_2	0.79
PF13565	HTH_32	0.79
PF02371	Transposase_20	0.79
PF01177	Asp_Glu_race	0.79
PF13384	HTH_23	0.79
PF12680	SnoaL_2	0.79
PF03176	MMPL	0.79
PF07969	Amidohydro_3	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	50.79
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	3.17
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	3.17
COG3548	Uncharacterized membrane protein	Function unknown [S]	3.17
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.79
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.70 %
Unclassified	root	N/A	37.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.70 %
Unclassified	root	N/A	37.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.11 %
Unclassified	root	N/A	37.30 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.41 %
Unclassified	root	N/A	37.30 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.59 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.86 %
Unclassified	root	N/A	37.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.38 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.10 %
Unclassified	root	N/A	37.30 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2.38 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.30 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	30.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.17 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.38 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.59 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.30 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	30.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.17 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.38 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.30 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	30.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.38 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.59 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.79 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.30 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	30.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.38 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.59 %
unclassified Kitasatospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora	0.79 %
Arthrobacter liuii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter liuii	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.30 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	30.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	2.38 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.59 %
Kitasatospora sp. A2-31	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. A2-31	0.79 %
Arthrobacter liuii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter liuii	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004629\|Ga0008092_11221095	Not Available	653	Open in IMG/M
3300005332\|Ga0066388_100854888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1494	Open in IMG/M
3300005332\|Ga0066388_108789501	Not Available	501	Open in IMG/M
3300005764\|Ga0066903_102427643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1014	Open in IMG/M
3300005764\|Ga0066903_102994799	Not Available	915	Open in IMG/M
3300005764\|Ga0066903_104333513	Not Available	758	Open in IMG/M
3300009792\|Ga0126374_11195513	Not Available	608	Open in IMG/M
3300010047\|Ga0126382_10126032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1709	Open in IMG/M
3300010047\|Ga0126382_10940528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	752	Open in IMG/M
3300010048\|Ga0126373_10757740	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300010048\|Ga0126373_12149808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter liuii	620	Open in IMG/M
3300010048\|Ga0126373_12759404	Not Available	548	Open in IMG/M
3300010362\|Ga0126377_10438882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1325	Open in IMG/M
3300012948\|Ga0126375_10545844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	874	Open in IMG/M
3300012971\|Ga0126369_10170086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2071	Open in IMG/M
3300012971\|Ga0126369_11173401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300016270\|Ga0182036_10174221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1554	Open in IMG/M
3300016294\|Ga0182041_10193783	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300016319\|Ga0182033_10690768	Not Available	893	Open in IMG/M
3300016319\|Ga0182033_10783407	Not Available	839	Open in IMG/M
3300016319\|Ga0182033_11002119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	743	Open in IMG/M
3300016357\|Ga0182032_10465956	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1033	Open in IMG/M
3300016387\|Ga0182040_10045424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2694	Open in IMG/M
3300016422\|Ga0182039_10089365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	2240	Open in IMG/M
3300016422\|Ga0182039_10674811	All Organisms → cellular organisms → Bacteria → Terrabacteria group	909	Open in IMG/M
3300021560\|Ga0126371_10390693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1532	Open in IMG/M
3300021560\|Ga0126371_11533555	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300021560\|Ga0126371_12124137	Not Available	677	Open in IMG/M
3300031543\|Ga0318516_10114258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1535	Open in IMG/M
3300031543\|Ga0318516_10248112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1029	Open in IMG/M
3300031543\|Ga0318516_10772886	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031544\|Ga0318534_10298908	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031545\|Ga0318541_10126454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1391	Open in IMG/M
3300031549\|Ga0318571_10272788	Not Available	628	Open in IMG/M
3300031549\|Ga0318571_10365389	Not Available	556	Open in IMG/M
3300031549\|Ga0318571_10400555	Not Available	536	Open in IMG/M
3300031561\|Ga0318528_10746372	Not Available	523	Open in IMG/M
3300031564\|Ga0318573_10566865	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031640\|Ga0318555_10745198	Not Available	529	Open in IMG/M
3300031681\|Ga0318572_10059633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2078	Open in IMG/M
3300031682\|Ga0318560_10351240	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031713\|Ga0318496_10124338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1397	Open in IMG/M
3300031713\|Ga0318496_10634998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	590	Open in IMG/M
3300031719\|Ga0306917_10399006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1073	Open in IMG/M
3300031723\|Ga0318493_10010350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3834	Open in IMG/M
3300031723\|Ga0318493_10508523	Not Available	666	Open in IMG/M
3300031724\|Ga0318500_10436377	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	654	Open in IMG/M
3300031736\|Ga0318501_10163186	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031736\|Ga0318501_10557408	Not Available	627	Open in IMG/M
3300031744\|Ga0306918_10589387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. A2-31	871	Open in IMG/M
3300031748\|Ga0318492_10030041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2436	Open in IMG/M
3300031751\|Ga0318494_10726680	Not Available	581	Open in IMG/M
3300031751\|Ga0318494_10731462	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	579	Open in IMG/M
3300031765\|Ga0318554_10282315	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300031771\|Ga0318546_10582831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	786	Open in IMG/M
3300031778\|Ga0318498_10015866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3127	Open in IMG/M
3300031780\|Ga0318508_1144489	Not Available	673	Open in IMG/M
3300031780\|Ga0318508_1192084	Not Available	584	Open in IMG/M
3300031781\|Ga0318547_10116532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1543	Open in IMG/M
3300031781\|Ga0318547_10815556	Not Available	581	Open in IMG/M
3300031781\|Ga0318547_10849868	Not Available	569	Open in IMG/M
3300031782\|Ga0318552_10205743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	996	Open in IMG/M
3300031782\|Ga0318552_10521575	Not Available	606	Open in IMG/M
3300031782\|Ga0318552_10676042	Not Available	526	Open in IMG/M
3300031793\|Ga0318548_10185053	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1020	Open in IMG/M
3300031793\|Ga0318548_10276144	Not Available	826	Open in IMG/M
3300031793\|Ga0318548_10333752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	744	Open in IMG/M
3300031793\|Ga0318548_10397932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	675	Open in IMG/M
3300031797\|Ga0318550_10018362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	2849	Open in IMG/M
3300031797\|Ga0318550_10559485	Not Available	550	Open in IMG/M
3300031798\|Ga0318523_10524398	Not Available	585	Open in IMG/M
3300031805\|Ga0318497_10648346	Not Available	592	Open in IMG/M
3300031819\|Ga0318568_10445261	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031819\|Ga0318568_10786590	Not Available	590	Open in IMG/M
3300031821\|Ga0318567_10442681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	737	Open in IMG/M
3300031821\|Ga0318567_10664484	Not Available	591	Open in IMG/M
3300031831\|Ga0318564_10283598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	733	Open in IMG/M
3300031832\|Ga0318499_10026462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300031833\|Ga0310917_10685913	Not Available	694	Open in IMG/M
3300031845\|Ga0318511_10473796	Not Available	578	Open in IMG/M
3300031846\|Ga0318512_10585688	Not Available	568	Open in IMG/M
3300031846\|Ga0318512_10653817	Not Available	537	Open in IMG/M
3300031859\|Ga0318527_10468203	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031890\|Ga0306925_11540269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	649	Open in IMG/M
3300031893\|Ga0318536_10275070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	855	Open in IMG/M
3300031894\|Ga0318522_10374579	Not Available	539	Open in IMG/M
3300031897\|Ga0318520_10781927	Not Available	598	Open in IMG/M
3300031910\|Ga0306923_10451591	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1458	Open in IMG/M
3300031912\|Ga0306921_11322907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	796	Open in IMG/M
3300031941\|Ga0310912_10880610	Not Available	690	Open in IMG/M
3300031942\|Ga0310916_10021732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4554	Open in IMG/M
3300031954\|Ga0306926_10534136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1438	Open in IMG/M
3300031954\|Ga0306926_12933574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	511	Open in IMG/M
3300031959\|Ga0318530_10359520	Not Available	603	Open in IMG/M
3300031959\|Ga0318530_10410065	Not Available	562	Open in IMG/M
3300032008\|Ga0318562_10528603	Not Available	683	Open in IMG/M
3300032009\|Ga0318563_10024506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	2974	Open in IMG/M
3300032010\|Ga0318569_10055128	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300032025\|Ga0318507_10429261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	575	Open in IMG/M
3300032042\|Ga0318545_10218974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	682	Open in IMG/M
3300032044\|Ga0318558_10376240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	706	Open in IMG/M
3300032051\|Ga0318532_10281785	Not Available	590	Open in IMG/M
3300032051\|Ga0318532_10319519	Not Available	551	Open in IMG/M
3300032052\|Ga0318506_10352822	Not Available	652	Open in IMG/M
3300032054\|Ga0318570_10234421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	831	Open in IMG/M
3300032054\|Ga0318570_10566834	Not Available	518	Open in IMG/M
3300032059\|Ga0318533_10405947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	995	Open in IMG/M
3300032059\|Ga0318533_10646069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	776	Open in IMG/M
3300032060\|Ga0318505_10410343	Not Available	640	Open in IMG/M
3300032064\|Ga0318510_10136622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	959	Open in IMG/M
3300032064\|Ga0318510_10154780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	907	Open in IMG/M
3300032066\|Ga0318514_10136234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1267	Open in IMG/M
3300032067\|Ga0318524_10437723	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032067\|Ga0318524_10754625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	514	Open in IMG/M
3300032068\|Ga0318553_10408947	Not Available	710	Open in IMG/M
3300032076\|Ga0306924_10816240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1038	Open in IMG/M
3300032089\|Ga0318525_10209540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	1002	Open in IMG/M
3300032089\|Ga0318525_10484231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	633	Open in IMG/M
3300032089\|Ga0318525_10507158	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300032089\|Ga0318525_10572862	Not Available	576	Open in IMG/M
3300032090\|Ga0318518_10518378	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032261\|Ga0306920_102026496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	805	Open in IMG/M
3300033289\|Ga0310914_10035757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4000	Open in IMG/M
3300033290\|Ga0318519_10661626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	637	Open in IMG/M
3300033290\|Ga0318519_10755919	Not Available	596	Open in IMG/M
3300033290\|Ga0318519_11007855	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.03%
Loam	Environmental → Terrestrial → Soil → Loam	3.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	84.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.97%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	70.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008092_112210951	3300004629	Tropical Rainforest Soil	VPGSVQVTDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD*
Ga0066388_1008548881	3300005332	Tropical Forest Soil	ALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTVPD*
Ga0066388_1087895011	3300005332	Tropical Forest Soil	MVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPG*
Ga0066903_1024276431	3300005764	Tropical Forest Soil	GDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTVPD*
Ga0066903_1029947991	3300005764	Tropical Forest Soil	MVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD*
Ga0066903_1043335132	3300005764	Tropical Forest Soil	TPVDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTVPG*
Ga0126374_111955131	3300009792	Tropical Forest Soil	DGPPFGKLTIHNARLYRFDDNDKIAAEQVTFYTTPD*
Ga0126382_101260321	3300010047	Tropical Forest Soil	TKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTVPD*
Ga0126382_109405282	3300010047	Tropical Forest Soil	LMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD*
Ga0126373_107577402	3300010048	Tropical Forest Soil	ALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYAVPD*
Ga0126373_121498081	3300010048	Tropical Forest Soil	GPPYGKLTIHNARLYRFDEDDKIAAEQVIFCTVPD*
Ga0126373_127594042	3300010048	Tropical Forest Soil	YALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPG*
Ga0126377_104388821	3300010362	Tropical Forest Soil	SAGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD*
Ga0126375_105458441	3300012948	Tropical Forest Soil	GDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPD*
Ga0126369_101700861	3300012971	Tropical Forest Soil	DGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTVPD*
Ga0126369_111734011	3300012971	Tropical Forest Soil	VTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD*
Ga0182036_101742212	3300016270	Soil	RVTDSTGDESCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0182041_101937833	3300016294	Soil	GSVRVTDSAGDGRYALLMVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPN
Ga0182033_106907682	3300016319	Soil	DGQYALLMLTTKVDGPPYGKLTIHSARMYRFDEDDKIAAEQVIFYTVPD
Ga0182033_107834071	3300016319	Soil	DDNYALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPAS
Ga0182033_110021192	3300016319	Soil	DGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0182032_104659561	3300016357	Soil	SNGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPAS
Ga0182040_100454243	3300016387	Soil	GSVEVTDSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0182039_100893654	3300016422	Soil	KVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0182039_106748112	3300016422	Soil	LMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPG
Ga0126371_103906931	3300021560	Tropical Forest Soil	GDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTVPG
Ga0126371_115335551	3300021560	Tropical Forest Soil	TPVDGPPFGKLTIHNARLYRFDENDKIAAEQVVFYTVPG
Ga0126371_121241371	3300021560	Tropical Forest Soil	LLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318516_101142581	3300031543	Soil	LLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0318516_102481121	3300031543	Soil	VDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0318516_107728862	3300031543	Soil	PGSVRVTDSAGDGRYALLMVTTKVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPS
Ga0318534_102989081	3300031544	Soil	TKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318541_101264543	3300031545	Soil	DSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDRIAAEQVIFCTVPD
Ga0318571_102727881	3300031549	Soil	ALLMVITKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPD
Ga0318571_103653892	3300031549	Soil	YALLMVTTKVDGPPFGKLTIHNARLYRFDDNDRIAAEQVIFCTVPD
Ga0318571_104005552	3300031549	Soil	DDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFCTTPD
Ga0318528_107463721	3300031561	Soil	VQVTDCAGDDRYALLMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPG
Ga0318573_105668652	3300031564	Soil	DSAGDDRYALLMVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPN
Ga0318555_107451982	3300031640	Soil	DSCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318572_100596333	3300031681	Soil	DSSGDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0318560_103512402	3300031682	Soil	DSAGDDRYALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318496_101243381	3300031713	Soil	VQVTDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318496_106349982	3300031713	Soil	VRVTDSSGDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0306917_103990061	3300031719	Soil	KVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318493_100103505	3300031723	Soil	DSCALLMVTTPVDGPPFGKLTIHNARLYRFDEDDRLAAEQVIFYTTPD
Ga0318493_105085231	3300031723	Soil	VRVTDSNGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTAPG
Ga0318500_104363771	3300031724	Soil	SAGDDQYALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318501_101631861	3300031736	Soil	LMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318501_105574082	3300031736	Soil	TDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0306918_105893871	3300031744	Soil	SCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318492_100300411	3300031748	Soil	GDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318494_107266802	3300031751	Soil	TDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNGKIAAEQVIFYTTPD
Ga0318494_107314622	3300031751	Soil	AGDDRYALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318554_102823151	3300031765	Soil	EVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPN
Ga0318546_105828311	3300031771	Soil	DTAGDDRYALLMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTVPD
Ga0318498_100158665	3300031778	Soil	VDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318508_11444892	3300031780	Soil	DQYALLMVTTKVDGPPYGKLTIHNARLYRFDEDDKIAAEQVVFYVGQE
Ga0318508_11920842	3300031780	Soil	LLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318547_101165323	3300031781	Soil	VTDSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDRIAAEQVIFCTVPD
Ga0318547_108155562	3300031781	Soil	NYALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPG
Ga0318547_108498682	3300031781	Soil	VTDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318552_102057431	3300031782	Soil	MVSTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318552_105215752	3300031782	Soil	YALLMVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYIAPN
Ga0318552_106760422	3300031782	Soil	TWPGSVEVTDSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDRIAAEQVIFCTVPD
Ga0318548_101850533	3300031793	Soil	PGTVQVTDSNGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPA
Ga0318548_102761443	3300031793	Soil	VTDSTGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318548_103337521	3300031793	Soil	GDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0318548_103979322	3300031793	Soil	ALLMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTVPD
Ga0318550_100183626	3300031797	Soil	AGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0318550_105594852	3300031797	Soil	MVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318523_105243981	3300031798	Soil	TDSAGDDQYALLMVTTKVDGPPYGKLTIHNARLYRFDEDDKIAAEQVVFYVGQE
Ga0318497_106483461	3300031805	Soil	VDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTAPG
Ga0318568_104452612	3300031819	Soil	TDSAGDDRYALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318568_107865901	3300031819	Soil	MVTTPVDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTAPG
Ga0318567_104426812	3300031821	Soil	PGTVQVTDSNGDDQYALLMVTTPVDGPPFGKLTIHNARLYRFDENDKLAAEQVIFYTVPA
Ga0318567_106644842	3300031821	Soil	ALLMVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYIAPN
Ga0318564_102835982	3300031831	Soil	QVTDCAGDDRYALLMVITKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPD
Ga0318499_100264625	3300031832	Soil	PVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPAS
Ga0310917_106859132	3300031833	Soil	STGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318511_104737961	3300031845	Soil	MVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318512_105856882	3300031846	Soil	ALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0318512_106538171	3300031846	Soil	VRVTDSTGDESCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318527_104682032	3300031859	Soil	VTDSAGDDRYALLMVTTAVDGPPFGKLTIRNARLYRFDDNDKIAAEQVIFYTAPN
Ga0306925_115402691	3300031890	Soil	YALLMVTTKVDGPPFGKLTIHNARLYRFDDNGKIAAEQVIFYTTPD
Ga0318536_102750702	3300031893	Soil	STGDESCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318522_103745792	3300031894	Soil	LMVSTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318520_107819272	3300031897	Soil	DGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYIAPN
Ga0306923_104515911	3300031910	Soil	DCAGDDRYALLMVITKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPG
Ga0306921_113229071	3300031912	Soil	YALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFCTTPD
Ga0310912_108806102	3300031941	Soil	GDDQYALLMVTTKVDGPPYGKLTIHNARLYRFDEDDKIAAEQVVFYVGQE
Ga0310916_100217321	3300031942	Soil	VTDSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0306926_105341362	3300031954	Soil	GPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0306926_129335742	3300031954	Soil	GPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTVPD
Ga0318530_103595201	3300031959	Soil	LMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318530_104100651	3300031959	Soil	LMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318562_105286032	3300032008	Soil	ALLMVTTKVDGPPYGKLTIHNARLYRFDEDDKIAAEQVVFYVGQE
Ga0318563_100245061	3300032009	Soil	SSGDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0318569_100551283	3300032010	Soil	VDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPS
Ga0318507_104292611	3300032025	Soil	IVPGSVRVTDSSGDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTPG
Ga0318545_102189742	3300032042	Soil	YALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0318558_103762402	3300032044	Soil	ALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTTPD
Ga0318532_102817852	3300032051	Soil	DSNGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDENDKIAAEQVIFYTVPAS
Ga0318532_103195192	3300032051	Soil	DSAGDDRYALFMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318506_103528223	3300032052	Soil	DSTGDDSCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318570_102344212	3300032054	Soil	VTDSAGDDRYALFMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318570_105668342	3300032054	Soil	VTDSTGDESCALLMVTTPVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318533_104059471	3300032059	Soil	TTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0318533_106460692	3300032059	Soil	VPGSVRVTDSSGDDQYALLMVTTKVDGPPYGNLTIHNARLYRFDEHDKIAAEQVIFYTTP
Ga0318505_104103432	3300032060	Soil	DSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318510_101366221	3300032064	Soil	SVQVTGSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318510_101547801	3300032064	Soil	GPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPG
Ga0318514_101362342	3300032066	Soil	PGSVQVTDSAGDDRYALFMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318524_104377232	3300032067	Soil	VDGPPYGKLTIHNARLYRFDDNDKIATEQVIFYTAPN
Ga0318524_107546252	3300032067	Soil	DRYALLMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPG
Ga0318553_104089471	3300032068	Soil	PGSVQVTDSTGDDRYALLMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQVIFYTAPD
Ga0306924_108162402	3300032076	Soil	DDRYALFMVTTKVDGPPYGKLTIHNARLYRFDDNDKIAAEQIIFYTVPD
Ga0318525_102095402	3300032089	Soil	DGPPFGKLTIHNARLYRFDDNDKIAAEQVIFYTTPD
Ga0318525_104842311	3300032089	Soil	GDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0318525_105071581	3300032089	Soil	LMVTTKVDGPPFGKLTIHNARLYRFDDNGKIAAEQVVFYTSPH
Ga0318525_105728622	3300032089	Soil	DRYALLMVTTKVDGPPYGKLTIRNARLYRFDDNGKIAAEQVIFYTAPD
Ga0318518_105183782	3300032090	Soil	MVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYTAPN
Ga0306920_1020264962	3300032261	Soil	DDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD
Ga0310914_100357576	3300033289	Soil	DQYALLMVTTKVDGPPYGKLTIHNARLYRFDDDDKIAAEQVIFYTTPG
Ga0318519_106616261	3300033290	Soil	LMVTTKVDGPPYGKLTIHQARLYRFDDNDKIAAEQVIFYTAPD
Ga0318519_107559192	3300033290	Soil	RVTDSAGDGRYALLMVTTEVDGPPYGKLTIRNARLYRFDDNDKIAAEQVIFYIAPN
Ga0318519_110078551	3300033290	Soil	VQVTDSAGDDRYALLMVTTKVDGPPFGKLTIHNARLYRFDDNDKIAAEQVIFCTVPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences