Metagenome / Metatranscriptome Family F066089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	77 residues
Representative Sequence	LAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Number of Associated Samples	103
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.56 %
% of genes near scaffold ends (potentially truncated)	60.63 %
% of genes from short scaffolds (< 2000 bps)	84.25 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.992 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (14.173 % of family members)
Environment Ontology (ENVO)	Unclassified (43.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.00% β-sheet: 0.00% Coil/Unstructured: 61.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF02604	PhdYeFM_antitox	2.36
PF01850	PIN	2.36
PF02195	ParBc	1.57
PF13744	HTH_37	1.57
PF01381	HTH_3	1.57
PF09588	YqaJ	1.57
PF03401	TctC	0.79
PF13470	PIN_3	0.79
PF01614	IclR	0.79
PF13432	TPR_16	0.79
PF15919	HicB_lk_antitox	0.79
PF11959	DUF3473	0.79
PF05015	HigB-like_toxin	0.79
PF03695	UPF0149	0.79
PF12804	NTP_transf_3	0.79
PF00296	Bac_luciferase	0.79
PF00990	GGDEF	0.79
PF05534	HicB	0.79
PF00857	Isochorismatase	0.79
PF07927	HicA_toxin	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	2.36
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	2.36
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.79
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.79
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	0.79
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.79
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.99 %
Unclassified	root	N/A	37.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.99 %
Unclassified	root	N/A	37.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.99 %
Unclassified	root	N/A	37.01 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.97 %
Unclassified	root	N/A	37.01 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.82 %
Unclassified	root	N/A	37.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.01 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.36 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.36 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.79 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.01 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	3.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.36 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.57 %
Gluconacetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.01 %
Komagataeibacter rhaeticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	3.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.36 %
Gluconacetobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	0.79 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.01 %
Komagataeibacter rhaeticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	3.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.36 %
Methylobacterium sp. Leaf99	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. Leaf99	0.79 %
Gluconacetobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12977528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconacetobacter → Gluconacetobacter diazotrophicus	1025	Open in IMG/M
3300000956\|JGI10216J12902_121001488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300001081\|JGI12662J13196_1006476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300002245\|JGIcombinedJ26739_100068139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3277	Open in IMG/M
3300004091\|Ga0062387_101751220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300004092\|Ga0062389_104571624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300004153\|Ga0063455_101337866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	548	Open in IMG/M
3300004643\|Ga0062591_102715764	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005436\|Ga0070713_101492060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300005446\|Ga0066686_10493424	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005454\|Ga0066687_10800135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300005467\|Ga0070706_100580701	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005541\|Ga0070733_10652835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300005841\|Ga0068863_102266547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300006172\|Ga0075018_10861040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300006949\|Ga0075528_10103307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	752	Open in IMG/M
3300006953\|Ga0074063_10751499	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300009089\|Ga0099828_10441465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300009098\|Ga0105245_10580674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300009518\|Ga0116128_1024478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2036	Open in IMG/M
3300009519\|Ga0116108_1049827	Not Available	1331	Open in IMG/M
3300009520\|Ga0116214_1193376	Not Available	764	Open in IMG/M
3300009522\|Ga0116218_1138165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300009523\|Ga0116221_1191830	Not Available	886	Open in IMG/M
3300009523\|Ga0116221_1290884	Not Available	707	Open in IMG/M
3300009524\|Ga0116225_1050949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300009551\|Ga0105238_11998491	Not Available	613	Open in IMG/M
3300009623\|Ga0116133_1173129	Not Available	572	Open in IMG/M
3300009629\|Ga0116119_1111879	Not Available	684	Open in IMG/M
3300009630\|Ga0116114_1005439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4635	Open in IMG/M
3300009632\|Ga0116102_1008308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3865	Open in IMG/M
3300009632\|Ga0116102_1034379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1671	Open in IMG/M
3300009639\|Ga0116122_1286800	Not Available	506	Open in IMG/M
3300009640\|Ga0116126_1003044	All Organisms → cellular organisms → Bacteria → Proteobacteria	9224	Open in IMG/M
3300009640\|Ga0116126_1035656	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300009640\|Ga0116126_1050299	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300009640\|Ga0116126_1178923	Not Available	694	Open in IMG/M
3300009640\|Ga0116126_1231555	Not Available	584	Open in IMG/M
3300009645\|Ga0116106_1015813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2694	Open in IMG/M
3300009645\|Ga0116106_1025940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2032	Open in IMG/M
3300009645\|Ga0116106_1282592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. Leaf99	528	Open in IMG/M
3300009651\|Ga0105859_1248205	Not Available	541	Open in IMG/M
3300009672\|Ga0116215_1547606	Not Available	500	Open in IMG/M
3300009839\|Ga0116223_10105750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1776	Open in IMG/M
3300009839\|Ga0116223_10169330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1349	Open in IMG/M
3300009839\|Ga0116223_10402483	Not Available	805	Open in IMG/M
3300009839\|Ga0116223_10661144	Not Available	601	Open in IMG/M
3300010343\|Ga0074044_10026135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4158	Open in IMG/M
3300010343\|Ga0074044_10068539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2404	Open in IMG/M
3300010358\|Ga0126370_10835297	Not Available	825	Open in IMG/M
3300010376\|Ga0126381_103423490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	624	Open in IMG/M
3300010379\|Ga0136449_100018068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18284	Open in IMG/M
3300010379\|Ga0136449_100525298	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300010379\|Ga0136449_101912566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	881	Open in IMG/M
3300010379\|Ga0136449_102084811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300011120\|Ga0150983_11889052	Not Available	583	Open in IMG/M
3300012019\|Ga0120139_1023266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300012189\|Ga0137388_12021811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	504	Open in IMG/M
3300012207\|Ga0137381_10869997	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012208\|Ga0137376_10580939	Not Available	970	Open in IMG/M
3300012210\|Ga0137378_11330979	Not Available	633	Open in IMG/M
3300012356\|Ga0137371_11355675	Not Available	524	Open in IMG/M
3300012358\|Ga0137368_10108331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2136	Open in IMG/M
3300012361\|Ga0137360_10674160	Not Available	887	Open in IMG/M
3300012986\|Ga0164304_10299350	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300012988\|Ga0164306_10972169	Not Available	697	Open in IMG/M
3300013503\|Ga0120127_10169322	Not Available	530	Open in IMG/M
3300014054\|Ga0120135_1038192	Not Available	691	Open in IMG/M
3300014151\|Ga0181539_1024712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3252	Open in IMG/M
3300014152\|Ga0181533_1201962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	768	Open in IMG/M
3300014155\|Ga0181524_10307374	Not Available	720	Open in IMG/M
3300014156\|Ga0181518_10038078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3016	Open in IMG/M
3300014156\|Ga0181518_10047297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2616	Open in IMG/M
3300014158\|Ga0181521_10430094	Not Available	644	Open in IMG/M
3300014159\|Ga0181530_10003874	All Organisms → cellular organisms → Bacteria	16315	Open in IMG/M
3300014162\|Ga0181538_10247714	Not Available	983	Open in IMG/M
3300014162\|Ga0181538_10560701	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300014164\|Ga0181532_10045220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2939	Open in IMG/M
3300014164\|Ga0181532_10151130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300014164\|Ga0181532_10365735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300014169\|Ga0181531_10068789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300014201\|Ga0181537_10345532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1021	Open in IMG/M
3300014201\|Ga0181537_10748977	Not Available	663	Open in IMG/M
3300014489\|Ga0182018_10080586	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300014638\|Ga0181536_10248473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300014654\|Ga0181525_10028855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3337	Open in IMG/M
3300014654\|Ga0181525_10088516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1718	Open in IMG/M
3300016319\|Ga0182033_11203781	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300016404\|Ga0182037_10809504	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300017947\|Ga0187785_10697761	Not Available	532	Open in IMG/M
3300018006\|Ga0187804_10262929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	746	Open in IMG/M
3300018019\|Ga0187874_10441879	Not Available	524	Open in IMG/M
3300018020\|Ga0187861_10140116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300018022\|Ga0187864_10130329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1267	Open in IMG/M
3300018037\|Ga0187883_10176380	Not Available	1097	Open in IMG/M
3300018037\|Ga0187883_10367635	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300018081\|Ga0184625_10508468	Not Available	607	Open in IMG/M
3300018090\|Ga0187770_10664465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300018468\|Ga0066662_11654889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter rhaeticus	669	Open in IMG/M
3300020199\|Ga0179592_10328656	Not Available	676	Open in IMG/M
3300021088\|Ga0210404_10919423	Not Available	501	Open in IMG/M
3300021170\|Ga0210400_11477081	Not Available	540	Open in IMG/M
3300021475\|Ga0210392_11454770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300021559\|Ga0210409_10977891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300022756\|Ga0222622_11336067	Not Available	528	Open in IMG/M
3300025453\|Ga0208455_1041625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300025505\|Ga0207929_1041652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	874	Open in IMG/M
3300025576\|Ga0208820_1048185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1205	Open in IMG/M
3300025906\|Ga0207699_11127315	Not Available	581	Open in IMG/M
3300025910\|Ga0207684_10978129	Not Available	709	Open in IMG/M
3300025918\|Ga0207662_10880236	Not Available	633	Open in IMG/M
3300025960\|Ga0207651_11109661	Not Available	709	Open in IMG/M
3300026023\|Ga0207677_11627573	Not Available	598	Open in IMG/M
3300026800\|Ga0207742_115529	Not Available	563	Open in IMG/M
3300026839\|Ga0207764_123849	Not Available	538	Open in IMG/M
3300027014\|Ga0207815_1020291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300027875\|Ga0209283_10332898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300028906\|Ga0308309_10981530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300031170\|Ga0307498_10438013	Not Available	522	Open in IMG/M
3300031525\|Ga0302326_10694955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1489	Open in IMG/M
3300031573\|Ga0310915_10409808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300031573\|Ga0310915_11216144	Not Available	521	Open in IMG/M
3300031681\|Ga0318572_10818858	Not Available	553	Open in IMG/M
3300031910\|Ga0306923_11247406	Not Available	792	Open in IMG/M
3300032160\|Ga0311301_11370627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300032160\|Ga0311301_11921385	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032174\|Ga0307470_10422981	Not Available	949	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Host-Associated	Host-Associated	3.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.06%
Aquatic	Environmental → Aquatic	37.01%
Plants	Host-Associated → Plants	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.27%
Freshwater	Environmental → Aquatic → Freshwater	34.65%
Sediment	Environmental → Aquatic → Sediment	2.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Peat	Environmental → Terrestrial → Peat	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.65%
Loam	Environmental → Terrestrial → Soil → Loam	10.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	14.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	14.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.57%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026800	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_129775283	3300000789	Soil	AHHGAVDPLISAKLAFALKTLAENGKLTGGRTRRVSARVDPGLVEAARIKTGLNNESELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
JGI10216J12902_1210014883	3300000956	Soil	MLSARLNFALSILAENGKLKGVRSERLSARVDPGLIQAARVKTGFKNDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
JGI12662J13196_10064761	3300001081	Forest Soil	PVISAKLAFALRTLAENGKLTGTRTRRVSARVDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
JGIcombinedJ26739_1000681391	3300002245	Forest Soil	AKLAFALRTLAENGKLTGTRTRRVSARVDSGQVEAARIKTELNNDPELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0062387_1017512201	3300004091	Bog Forest Soil	GKKAHPRGGGRKLIDPITSARVEFALSTLAANGKLEGSRTKRLSARVDPGLIRAARTKTGLNNNSELVNAALAVLAAPDDFGPWFAVQAGRLPKDFELEI*
Ga0062389_1045716241	3300004092	Bog Forest Soil	RVEFALSTLAANGKLEGSRTQRLSARVDPGLIRAARTKTGLNNNSELVNAALAVLAAPDDFGPWFAVQAGRLPKDFELEI*
Ga0063455_1013378661	3300004153	Soil	PIVAARLAFALKALHESGRLAGVRTKRLSARVDPGLIKAARAKTGLENDSDLINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0062591_1027157641	3300004643	Soil	EGGKLTGTRTRRLSARVDPGLVEAARIKTGLNNDSELINAALAVIAAADDFGPWFAAQEGRLPKDFELEL*
Ga0070713_1014920601	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSARLAFAFKTLREHGLLAGARTKRLSARVDLGLINAARIKTGLENYSDLINAALAVIAAPADFGPWFATQATRLLREPEF*
Ga0066686_104934241	3300005446	Soil	SARLAFAFKTLSESGRLAGARTKRLSARVDPGLIKAARMKTGLENDSDLVNAALAVIAAPDDFGAWFVTQAGRLPKDFELEF*
Ga0066687_108001351	3300005454	Soil	GARTERLSARVDPGLIKAARTKTGLKNDSDLIHAALAVIAAPDDFGPWFATQAGRLPKDFELEL*
Ga0070706_1005807011	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RARHGAVDPVISAKLAFALKTLAENGTLTGTRTRRVSARVDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0070733_106528351	3300005541	Surface Soil	KSIDPITSARVAFALSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGFESDSELVNAALAVLAAPDDFGPWFVAQGGRLPKDFELEI*
Ga0068863_1022665471	3300005841	Switchgrass Rhizosphere	VRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
Ga0075018_108610401	3300006172	Watersheds	LTGTRTRRVSARVDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0075528_101033071	3300006949	Arctic Peat Soil	RVEFALSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0074063_107514992	3300006953	Soil	LNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
Ga0099828_104414652	3300009089	Vadose Zone Soil	MVSAKLEFAWNALAAGGTLAGARTKRLSARVDPGLIEAARRKTGIGNDSDLINAALAVIAAPDDFGPWFAAQAGRLPRDFELEL*
Ga0105245_105806743	3300009098	Miscanthus Rhizosphere	ILSARLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGPAAKGF*
Ga0116128_10244781	3300009518	Peatland	LAASGKLEGSRTERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEL
Ga0116108_10498272	3300009519	Peatland	VEFALSTLAASGKLEGSRTERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116214_11933761	3300009520	Peatlands Soil	LAASGKLKGSRTERLSARVDPGLMKAARTWTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEI*
Ga0116218_11381653	3300009522	Peatlands Soil	LAASGKLKGSRTERLSARVDPGLMKAARTRTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEI*
Ga0116221_11918302	3300009523	Peatlands Soil	LAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNSQLVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116221_12908842	3300009523	Peatlands Soil	LAARGKLKGSRTERLSARVDPGLIEAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116225_10509494	3300009524	Peatlands Soil	LAARGKLKGSRTERLSARVDPGLIEAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFKLEL*
Ga0105238_119984912	3300009551	Corn Rhizosphere	SARLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
Ga0116133_11731292	3300009623	Peatland	SGKLKGSRTERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116119_11118791	3300009629	Peatland	VEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116114_10054392	3300009630	Peatland	VEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKAGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116102_10083088	3300009632	Peatland	LAASGKLEGSRTERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116102_10343791	3300009632	Peatland	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEI*
Ga0116122_12868002	3300009639	Peatland	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELINAALAVLAAPDDFGPWFAAQAGCLPKDFELEL*
Ga0116126_10030449	3300009640	Peatland	LAASGKLEGSRTERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAASDDFGPWFAAQSGRLPKDFELEI*
Ga0116126_10356563	3300009640	Peatland	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAVPDDFGPWFAAQAGRLPKDFELEL*
Ga0116126_10502991	3300009640	Peatland	VEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDF
Ga0116126_11789231	3300009640	Peatland	LAASGKLKGSRTERLSARVDPGLIKAARSKTGLKSDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116126_12315551	3300009640	Peatland	VDFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKAGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116106_10158131	3300009645	Peatland	IEFALSTLAARGKLKGSRTKRLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116106_10259402	3300009645	Peatland	VEFALSTLAASGKLKGSRSERLSARVDPGLIQAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116106_12825921	3300009645	Peatland	LAASGKLEGSRTERLSARVDPGLIRAARAKTGLDSDSELINAALAVLAAPDDFGPWFAAQAGCLPKDFEL
Ga0105859_12482051	3300009651	Permafrost Soil	LSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGFKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116215_15476061	3300009672	Peatlands Soil	STLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116223_101057504	3300009839	Peatlands Soil	SVDPITAARVEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0116223_101693303	3300009839	Peatlands Soil	LAARGKLKGSRTKRLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116223_104024831	3300009839	Peatlands Soil	LAASGKLKGSRTERLSARVDPGLIKAARSKTGLKSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0116223_106611441	3300009839	Peatlands Soil	LARVEFALSTLAASGKLKGSRSERLSARVDPRLIKAARTKTGLNNDSELVNAALAVLAAADDFGPWFAAQAGRLPKDFELEI*
Ga0074044_100261356	3300010343	Bog Forest Soil	LAASGKLKGSRTERLSARVDPGLIKAARTKTGLDNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0074044_100685394	3300010343	Bog Forest Soil	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGGDSELVNAALAVLAVPDDFGPWFAAQAGRLPKDFELEL*
Ga0126370_108352972	3300010358	Tropical Forest Soil	STLANDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL*
Ga0126381_1034234901	3300010376	Tropical Forest Soil	KLSGIRTRRMSVRVDPGLVKAARTKTGLKTDSELINAALAMIAAPDDFGSWFATQAGRLPKDFDLEL*
Ga0136449_1000180689	3300010379	Peatlands Soil	LVASGKLKGSRSGRLSARVDPGLIEAARAKTGLQNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0136449_1005252981	3300010379	Peatlands Soil	MLWFDAMTVRSLAGSARVDPGLIKQARAKTGLGNDSVNAGLAVLAAPDDFGPWFAAQAERLPKDFELEL*
Ga0136449_1019125661	3300010379	Peatlands Soil	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0136449_1020848112	3300010379	Peatlands Soil	DPITSARVEFALSTLAASGKLKGSRTKRLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGPWFAAQSGRLPQDFELEI*
Ga0150983_118890522	3300011120	Forest Soil	MEGRKLAGARSRRLSARVDPGLIEAARQKTGIANNSDLINAALAVIAAPDDFGPWFAAQAGRLPPDFELDL*
Ga0120139_10232664	3300012019	Permafrost	LAASGKLKGSRTKRLSARIDPGLLKAARTKTGLGNDSELVNVALAVLAAPDDFGHWFAAQAGRLPKDFGLEL*
Ga0137388_120218111	3300012189	Vadose Zone Soil	MVSAKLEFAWNALAAGGTLAGARTKRLSARVDPGLIEAARRKTGIGNDSDLINAALAVIAAPDDFGPWFAAQAGRLPRDFE
Ga0137381_108699972	3300012207	Vadose Zone Soil	LADDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL*
Ga0137376_105809391	3300012208	Vadose Zone Soil	LAARLNFALSTLANDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL*
Ga0137378_113309792	3300012210	Vadose Zone Soil	LANDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFLSQARRLPKDFELEL*
Ga0137371_113556751	3300012356	Vadose Zone Soil	FKSLTDNGKLTGTRSRRVSARLDPGLVEAARSKTGLKKDSDLISAALAVIAAPDDFGPWFAAQAGQLAKDFELEL*
Ga0137368_101083313	3300012358	Vadose Zone Soil	FALSILAENGKLKGVRSERLSARVDPGLIQAARVKTGFKNDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
Ga0137360_106741602	3300012361	Vadose Zone Soil	RTLAENGKLAGTRTRRVSDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0164304_102993502	3300012986	Soil	MASAMARLNFALSTLADDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL*
Ga0164306_109721691	3300012988	Soil	RLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL*
Ga0120127_101693221	3300013503	Permafrost	FLTGLRTERLSARVDPGLIKAARSKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0120135_10381922	3300014054	Permafrost	LAASGKLKGSRTERLSARVDPGLIKAARSKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181539_10247121	3300014151	Bog	VEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALVVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181533_12019621	3300014152	Bog	VEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKSDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181524_103073742	3300014155	Bog	GSRTERLSARVDPGLIKAARAKTGLGNSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181518_100380787	3300014156	Bog	FALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181518_100472972	3300014156	Bog	LAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181521_104300942	3300014158	Bog	LAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181530_1000387417	3300014159	Bog	LAASGKLKGSRTERLSARVDPGLIKAARSKTGLKSDSELVNAALAVLAAPDDFGPWFAAQSGRLPKEFELEI*
Ga0181538_102477141	3300014162	Bog	VDFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKAGLKNDSELVNAALDVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181538_105607012	3300014162	Bog	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181532_100452201	3300014164	Bog	LSTLAARGKLKGSRTERLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181532_101511302	3300014164	Bog	LAASGKLKGSHSKRLSARVDPGLIKAARTKTGLQNDSELVSAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181532_103657351	3300014164	Bog	KLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181531_100687892	3300014169	Bog	LAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0181537_103455321	3300014201	Bog	LAASGKLKGSRTERLSARVDPGLIKAARTKTGLNSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEI*
Ga0181537_107489772	3300014201	Bog	LDPITSARIEFALSTLAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0182018_100805863	3300014489	Palsa	MQQLSTLAASGKLEGSRTERLSARVDPGLIKAARTKTGLNNGSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI*
Ga0181536_102484732	3300014638	Bog	LAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSNSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEI*
Ga0181525_100288556	3300014654	Bog	LAASGKLKGSRTERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGTWFAVQSGRLPKDFELEI*
Ga0181525_100885163	3300014654	Bog	LAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNNSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL*
Ga0182033_112037812	3300016319	Soil	FALSTLAANGALQGTRSRRLSARVDPGLIKAARKKSGLTNDSELINAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0182037_108095042	3300016404	Soil	SMDPIVSARVEFALSTLAANGALQGTRSRRLSARVDPGLIKAARKKSGLTNDSELINAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0187785_106977612	3300017947	Tropical Peatland	GKVLADPIVLARLAFALKALHESGRLAGARTKRLSARVDPGLIKAARAKTGLENDSDLINAALAVIAAPDDFGPWFATQAGRLPKDFELEL
Ga0187804_102629292	3300018006	Freshwater Sediment	GARSARLSARIDPGLMQAARAKTGLNNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0187874_104418791	3300018019	Peatland	PSRSIDPITSARIEFALSTLAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0187861_101401163	3300018020	Peatland	ARGKLKGSRTKRLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0187864_101303291	3300018022	Peatland	TERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELE
Ga0187883_101763802	3300018037	Peatland	LAASGKLKGSRTERLSARVDPGLIKAARSKTGLKSDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI
Ga0187883_103676352	3300018037	Peatland	TLAASGKLKGSRSERLSARVDPGLIKAARTKTGLQNDSELVNAALAVLAAPDDFGPWFAAQAGRLRDFELEL
Ga0184625_105084682	3300018081	Groundwater Sediment	AGPKPLDPILSARLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL
Ga0187770_106644652	3300018090	Tropical Peatland	RTERLSARVDPGLIKAARAKTGLDNDSELVNAALAVLAATDDFGPWFAAQAGRLPKDFALEL
Ga0066662_116548891	3300018468	Grasslands Soil	NGKLTGTRTRRVSARVDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLPKDFELEL
Ga0179592_103286562	3300020199	Vadose Zone Soil	LNFALSTLANDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFLSQARRLPKDFELEL
Ga0210404_109194231	3300021088	Soil	RIEFAFSTLAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNNSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0210400_114770812	3300021170	Soil	IDPLVSAKVRFAYKVLMEGRKLAGARSRRLSARVDPGLIEAARQKTGIANNSDLINAALAVIAAPDDFGPWFAAQAGRLPPDFELDL
Ga0210392_114547702	3300021475	Soil	MASAMARLNFALSTLADDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKGFELEL
Ga0210409_109778911	3300021559	Soil	ARHGTVDPVISAKLAFALRTLAENGKLTGTRTRRVSARVDPGLVEAARIKTGLNNDSELINAALAVIAAPDDFGPWFAAQAGRLQKDFELEL
Ga0222622_113360671	3300022756	Groundwater Sediment	RVEFALSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGLKNDSHLVNAALAVLAAHDDFGPWFAAQAGRLPKDFELEL
Ga0208455_10416252	3300025453	Peatland	EGSRTERLSARVDPGLIKAARTKTGLNNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI
Ga0207929_10416522	3300025505	Arctic Peat Soil	PITSARVEFALSTLAASGKLKGSRTERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0208820_10481851	3300025576	Peatland	AARVEFALSTLAASGKLKGSRSERLSARVDPGLIKAARTKTGLKNDSELVNAALAVLAAPDDFGPWFAAQSGRLPKDFELEI
Ga0207699_111273152	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RKLAGARSRRLSARVDPGLIEAARQKTGIANNSDLINAALAVIAAPDDFGPWFAAQSGRLPPDFELGL
Ga0207684_109781292	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NDGKLKGIRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL
Ga0207662_108802362	3300025918	Switchgrass Rhizosphere	LSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL
Ga0207651_111096612	3300025960	Switchgrass Rhizosphere	QRSGPKPLDPILSARLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAVPDDFGPWFVSQAGRLPKDFELEL
Ga0207677_116275731	3300026023	Miscanthus Rhizosphere	ILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL
Ga0207742_1155291	3300026800	Tropical Forest Soil	IDPITSARVEFALSTLAASGKLKGSRTERLSARVDPGLIKAARVKTGLKNDSELVNAALAVLAAPDDFGLWFAAQAGRLPKDFELEL
Ga0207764_1238492	3300026839	Tropical Forest Soil	STLAASGKLKGSRTERLSARVDPGLIKAARVKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0207815_10202911	3300027014	Tropical Forest Soil	GQLTGARTERLSARVDPGLIKAARSKTGFKSDSELINAALAVLAAPDDFGPWFAAQAGRLAKDFELGL
Ga0209283_103328983	3300027875	Vadose Zone Soil	MVSAKLEFAWNALAAGGTLAGARTKRLSARVDPGLIEAARRKTGIGNDSDLINAALAVIAAPDDFGPWFAAQAGRLPRDFELEL
Ga0308309_109815301	3300028906	Soil	GVLAEGGQLVGARTKRMSARVDPGLLKAAKAKTGLKNDSDLISAALAVIAASDDFGPWFAAQAGRLSRDFKLDF
Ga0307498_104380132	3300031170	Soil	SARLNFALSILAENGKLKGVRSERVSARVDPGLIQAARVKTGFENDSDLVNAALAVLAMPDDFGPWFVSQAGRLPKDFELEL
Ga0302326_106949553	3300031525	Palsa	LSTLAASGKLKGSRTERLSARVDPGLIKAARAKTGLGNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0310915_104098081	3300031573	Soil	VAIAPRRSTDPIVSARIKFALATLTANGALTGARTKRLSARVDPGLINAARTKTGLSNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0310915_112161442	3300031573	Soil	TLAANGALQGTRSRRLSARVDPGLIKAARKKSGLTNDSELINAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0318572_108188581	3300031681	Soil	LNYALSTLADGGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVLAAPDDFGPWFVSQAGRLPKDFELAL
Ga0306923_112474061	3300031910	Soil	MTIAPRQSMDPIVSARVEFALSTLAANGALQGTRSRRLSARVDPGLIKAARKKSGLTNDSELINAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0311301_113706271	3300032160	Peatlands Soil	IDPITSARVEFALTTLAASGKLKGSRTERLSARVDPGLIKAARAKTGLKNDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0311301_119213851	3300032160	Peatlands Soil	RSIDPITSARIEFALSTLAASGKLEGSRSERLSARVDPGLIKAARAKTGLGSDSELVNAALAVLAAPDDFGPWFAAQAGRLPKDFELEL
Ga0307470_104229811	3300032174	Hardwood Forest Soil	YEQLRKVPSVPSASSMASAMARLNFALSTLADDGKLKGVRSERLSARVDPGLIKAARAKTGFQNDSDLVNAALAVIAAPDDFGPWFVSQAGRLPKDFELEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences