Metagenome / Metatranscriptome Family F066045

Basic Information
Family ID	F066045
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	83 residues
Representative Sequence	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRPLLVMQEQLSYVHH
Number of Associated Samples	121
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.24 %
% of genes near scaffold ends (potentially truncated)	91.34 %
% of genes from short scaffolds (< 2000 bps)	84.25 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Unclassified (55.906 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.449 % of family members)
Environment Ontology (ENVO)	Unclassified (33.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.071 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.37% β-sheet: 3.67% Coil/Unstructured: 55.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01039	Carboxyl_trans	14.17
PF00884	Sulfatase	2.36
PF08379	Bact_transglu_N	1.57
PF12395	DUF3658	1.57
PF00067	p450	1.57
PF03884	YacG	0.79
PF02449	Glyco_hydro_42	0.79
PF01011	PQQ	0.79
PF01436	NHL	0.79
PF13360	PQQ_2	0.79
PF07542	ATP12	0.79
PF07676	PD40	0.79
PF02545	Maf	0.79
PF13520	AA_permease_2	0.79
PF08352	oligo_HPY	0.79
PF00069	Pkinase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	14.17
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	14.17
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	14.17
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.15
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG2124	Cytochrome P450	Defense mechanisms [V]	1.57
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.79
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.79
COG5387	Mitochondrial FoF1-type ATP synthase assembly chaperone ATP12	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
All Organisms	root	All Organisms	44.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
cellular organisms	root	All Organisms → cellular organisms	44.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.96 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	9.45 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.94 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.57 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	5.51 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	3.15 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	5.51 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2.36 %
Phenylobacterium immobile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium immobile	0.79 %
Phenylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Rhizobium freirei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei	5.51 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2.36 %
Phenylobacterium immobile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium immobile	0.79 %
Phenylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.91 %
Rhizobium freirei PRF 81	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	5.51 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2.36 %
Phenylobacterium immobile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium immobile	0.79 %
Phenylobacterium aquaticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01AHRG4	Not Available	596	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1021430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300000955\|JGI1027J12803_102813618	Not Available	948	Open in IMG/M
3300000956\|JGI10216J12902_102559614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300002067\|JGI24735J21928_10222427	Not Available	548	Open in IMG/M
3300003996\|Ga0055467_10018748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1521	Open in IMG/M
3300004047\|Ga0055499_10112131	Not Available	514	Open in IMG/M
3300004463\|Ga0063356_100779556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300004463\|Ga0063356_104907550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300004643\|Ga0062591_100693448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300004643\|Ga0062591_102553065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300004778\|Ga0062383_10445094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300005213\|Ga0068998_10094358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	659	Open in IMG/M
3300005293\|Ga0065715_11110967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300005332\|Ga0066388_103426928	Not Available	810	Open in IMG/M
3300005406\|Ga0070703_10526901	Not Available	535	Open in IMG/M
3300005436\|Ga0070713_100935122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	835	Open in IMG/M
3300005529\|Ga0070741_10987238	Not Available	723	Open in IMG/M
3300005529\|Ga0070741_11412189	Not Available	578	Open in IMG/M
3300005539\|Ga0068853_102343043	Not Available	517	Open in IMG/M
3300005578\|Ga0068854_100003004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10471	Open in IMG/M
3300005829\|Ga0074479_10956426	Not Available	544	Open in IMG/M
3300005844\|Ga0068862_101567064	Not Available	665	Open in IMG/M
3300006173\|Ga0070716_101249284	Not Available	598	Open in IMG/M
3300006871\|Ga0075434_101474605	Not Available	690	Open in IMG/M
3300006881\|Ga0068865_100847881	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006954\|Ga0079219_11055808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	682	Open in IMG/M
3300009011\|Ga0105251_10548743	Not Available	544	Open in IMG/M
3300009148\|Ga0105243_11919429	Not Available	625	Open in IMG/M
3300009156\|Ga0111538_11389849	Not Available	886	Open in IMG/M
3300009176\|Ga0105242_11711329	Not Available	665	Open in IMG/M
3300009609\|Ga0105347_1039988	Not Available	1659	Open in IMG/M
3300009678\|Ga0105252_10174729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300010362\|Ga0126377_11412824	Not Available	769	Open in IMG/M
3300010366\|Ga0126379_12612124	Not Available	603	Open in IMG/M
3300010371\|Ga0134125_10995896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	919	Open in IMG/M
3300010376\|Ga0126381_100060843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4667	Open in IMG/M
3300010397\|Ga0134124_10573347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1102	Open in IMG/M
3300010399\|Ga0134127_10684678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300010403\|Ga0134123_12861545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300011003\|Ga0138514_100085431	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300011403\|Ga0137313_1070622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300011405\|Ga0137340_1096724	Not Available	569	Open in IMG/M
3300011423\|Ga0137436_1156928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300011430\|Ga0137423_1065903	Not Available	1075	Open in IMG/M
3300012166\|Ga0137350_1098514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300012167\|Ga0137319_1040137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300012205\|Ga0137362_10062271	All Organisms → cellular organisms → Bacteria	3069	Open in IMG/M
3300012207\|Ga0137381_11592862	Not Available	544	Open in IMG/M
3300012902\|Ga0157291_10144847	Not Available	700	Open in IMG/M
3300012930\|Ga0137407_11168511	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300012960\|Ga0164301_11126259	Not Available	626	Open in IMG/M
3300012984\|Ga0164309_11579214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300012987\|Ga0164307_11357495	Not Available	597	Open in IMG/M
3300013763\|Ga0120179_1091692	Not Available	673	Open in IMG/M
3300014298\|Ga0075341_1136891	Not Available	512	Open in IMG/M
3300014324\|Ga0075352_1170376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	625	Open in IMG/M
3300014325\|Ga0163163_11757182	Not Available	681	Open in IMG/M
3300014968\|Ga0157379_10418190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300015252\|Ga0180075_1107405	Not Available	501	Open in IMG/M
3300015373\|Ga0132257_100343139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1804	Open in IMG/M
3300016270\|Ga0182036_10194413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1482	Open in IMG/M
3300016294\|Ga0182041_11767312	Not Available	573	Open in IMG/M
3300016422\|Ga0182039_11214623	Not Available	681	Open in IMG/M
3300016445\|Ga0182038_10091298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2183	Open in IMG/M
3300017792\|Ga0163161_11310380	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300017966\|Ga0187776_10058824	Not Available	2202	Open in IMG/M
3300018028\|Ga0184608_10332343	Not Available	667	Open in IMG/M
3300018029\|Ga0187787_10257942	Not Available	639	Open in IMG/M
3300018084\|Ga0184629_10645830	Not Available	536	Open in IMG/M
3300018469\|Ga0190270_10203372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1676	Open in IMG/M
3300019377\|Ga0190264_10005450	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300020070\|Ga0206356_11595127	Not Available	544	Open in IMG/M
3300020581\|Ga0210399_10959215	Not Available	691	Open in IMG/M
3300021560\|Ga0126371_10094974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2957	Open in IMG/M
3300022893\|Ga0247787_1049337	Not Available	619	Open in IMG/M
3300025711\|Ga0207696_1044911	Not Available	1280	Open in IMG/M
3300025917\|Ga0207660_11682133	Not Available	511	Open in IMG/M
3300025925\|Ga0207650_11312065	Not Available	616	Open in IMG/M
3300025935\|Ga0207709_11148112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300025939\|Ga0207665_10844892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300025945\|Ga0207679_12182051	Not Available	502	Open in IMG/M
3300025973\|Ga0210145_1011505	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300026023\|Ga0207677_10763160	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300026078\|Ga0207702_11193416	Not Available	755	Open in IMG/M
3300026121\|Ga0207683_11185687	Not Available	708	Open in IMG/M
3300026464\|Ga0256814_1033085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	617	Open in IMG/M
3300027326\|Ga0209731_1037941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300027614\|Ga0209970_1086072	Not Available	593	Open in IMG/M
3300027765\|Ga0209073_10529926	Not Available	500	Open in IMG/M
3300028800\|Ga0265338_10045095	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300028802\|Ga0307503_10775894	Not Available	545	Open in IMG/M
3300029989\|Ga0311365_10270865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium immobile	1465	Open in IMG/M
3300030000\|Ga0311337_10346697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium aquaticum	1249	Open in IMG/M
3300031716\|Ga0310813_11832716	Not Available	570	Open in IMG/M
3300031716\|Ga0310813_11958796	Not Available	552	Open in IMG/M
3300031719\|Ga0306917_11416355	Not Available	536	Open in IMG/M
3300031744\|Ga0306918_10019837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4055	Open in IMG/M
3300031747\|Ga0318502_10541221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	699	Open in IMG/M
3300031754\|Ga0307475_11206168	Not Available	589	Open in IMG/M
3300031764\|Ga0318535_10196050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	903	Open in IMG/M
3300031770\|Ga0318521_10078143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1779	Open in IMG/M
3300031777\|Ga0318543_10281759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	743	Open in IMG/M
3300031941\|Ga0310912_10903191	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031947\|Ga0310909_10460649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1067	Open in IMG/M
3300032012\|Ga0310902_10131708	Not Available	1389	Open in IMG/M
3300032044\|Ga0318558_10596299	Not Available	552	Open in IMG/M
3300032075\|Ga0310890_10652991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300032180\|Ga0307471_101824319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300032180\|Ga0307471_102132263	Not Available	705	Open in IMG/M
3300032421\|Ga0310812_10339539	Not Available	672	Open in IMG/M
3300032829\|Ga0335070_11044577	Not Available	753	Open in IMG/M
3300033513\|Ga0316628_102808163	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300033551\|Ga0247830_10648271	Not Available	837	Open in IMG/M
3300033760\|Ga0314870_027220	Not Available	529	Open in IMG/M
3300034257\|Ga0370495_0239811	Not Available	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.38%
Host-Associated	Host-Associated	22.83%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.20%
Plants	Host-Associated → Plants	22.83%
Aquatic	Environmental → Aquatic	14.17%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.02%
Sediment	Environmental → Aquatic → Sediment	9.45%
Marine	Environmental → Aquatic → Marine	3.15%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Peat	Environmental → Terrestrial → Peat	1.57%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.30%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.09%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.15%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.36%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.36%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.57%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.79%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014298	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033760	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_C	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_03617150	2170459016	Switchgrass, Maize And Mischanthus Litter	VFYDMRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERLRADARTNQMVYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVC
AP72_2010_repI_A001DRAFT_10214301	3300000893	Forest Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLEDARANEMIYEHEGVQEPVRLMLRPLLVMQEARRRARQRDDLRA*
JGI1027J12803_1028136182	3300000955	Soil	VTRPVLSPAEALGLSGATLEARIRRAANHVSDTTFARIAARLLADARANEMIYEHEGVQEPIRLMLRPLLVMQEQL
JGI10216J12902_1025596141	3300000956	Soil	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDEK
JGI24735J21928_102224271	3300002067	Corn Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRPLLV
Ga0055467_100187481	3300003996	Natural And Restored Wetlands	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLKADAFANGMIYEHDGVPEAIRVMLRPLLAMSEQFDYVHYVCLRL
Ga0055499_101121312	3300004047	Natural And Restored Wetlands	MRTVLSPAEALGLSGATLEGRVRRAAHHVSDAAFARLADRLRADAWSNQMIYEHDGVEEAVRVMLRPLLVMPEQLA
Ga0063356_1007795563	3300004463	Arabidopsis Thaliana Rhizosphere	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDE
Ga0063356_1049075501	3300004463	Arabidopsis Thaliana Rhizosphere	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARIAERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDE
Ga0062591_1006934481	3300004643	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCL
Ga0062591_1025530652	3300004643	Soil	MPPILSPAESLGLSGAALEARVRRAAVHIPDAVFGRIAEHLRADAVANQIIYEHEGRTEPVRIMLRPLLAMRDQLSYVHYVCLRITEALKRFPALYLEDPRIKPILAIT
Ga0062383_104450941	3300004778	Wetland Sediment	MRPMLSPAESLGLSGATLEGRVQRAAHAVADPTFARIAERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDENIRKIIA
Ga0068998_100943581	3300005213	Natural And Restored Wetlands	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIDERLRADARINQMVYEHEGVEEPIRLMLR
Ga0065715_111109671	3300005293	Miscanthus Rhizosphere	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDEKMRKIIAISPDEESWLRASWTP
Ga0066388_1034269281	3300005332	Tropical Forest Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFGRIAERLLADARANEMIYEHEGVQEPVRLMLRPLLVMQEQLS
Ga0070677_101810161	3300005333	Miscanthus Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHE
Ga0070703_105269011	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLRTDAWANGMIYERDGEKEAIRIMLRPLLAMSEQFDYVHYVCLRLLEALKILPALY
Ga0070713_1009351222	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLEDARANEMIYEHEGVQEPVRLMLR
Ga0070694_1010863062	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRPVLSPAESLGLSGATLEGRIRRAATHVADATFARIEERLKADAFANEMIYERDGAREA
Ga0070741_109872381	3300005529	Surface Soil	MRPILSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARANLMVYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEAL
Ga0070741_114121891	3300005529	Surface Soil	MRPILSPAEALGLSGATLEARIRRAANHVTDTAFARIDERLRADARANLMVYEHEGVE
Ga0068853_1023430431	3300005539	Corn Rhizosphere	MRPILSPAEALGLSGATLEARIRRAANHVTDASFARIDERLRADARTNQLVYEHNGVEEPIRLMLRPLLVMQEQ
Ga0068854_10000300410	3300005578	Corn Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRP
Ga0074479_109564261	3300005829	Sediment (Intertidal)	MRSVLSPAEALGLSGATLEGRVRRAAHHVSDATFAKLADRLRADAWANLMIYEHEGVEEAVRIMLRP
Ga0068862_1015670642	3300005844	Switchgrass Rhizosphere	MLSPAESLGLSGATLEGRMRRAVHQVSDAVLQRIAQRLQADALTHEVIYEHEGVPEAVRIMPRPLL
Ga0070716_1012492841	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPTILSPAESLGLAGAALEARVRRAAVHIPDAVFARIAERLKADAFANQLIYEHEGKIEPIRIMLRPLLAMRDQLGYVHRVCLRI
Ga0075427_100841451	3300006194	Populus Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIATRLLADARANEMIYEHE
Ga0075434_1014746052	3300006871	Populus Rhizosphere	MRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERLRADARTNQMVYEHEGVEGPIRLMLRPLLV
Ga0068865_1008478812	3300006881	Miscanthus Rhizosphere	MRPILSPAEVLGLSGAALESRVRSASHQVPDLVFARLADRLRADAWSNRLIYEHEGVEEAVRIMLRPLLVMPEQLSYVHHVCSQLTEALKRLPGFYREDERVRRILAI
Ga0079219_110558082	3300006954	Agricultural Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNRLIYEHEGVEAPIRIMLRPLVVMKAPLSYVHPVWLQLI
Ga0105251_105487431	3300009011	Switchgrass Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRPLLVMQEQLSYVHH
Ga0105243_119194291	3300009148	Miscanthus Rhizosphere	MRPILSPAEVLGLSGAALESRARSASHQVPDLVFARLAEHLRADAWCNRLIYEHEGVEEAVRIMLRPLLVMPEQLSYVHHVCLQLTEALKRLPGLYRKDERVRRVLAITKEEEAWFNATWTSAHE
Ga0111538_113898492	3300009156	Populus Rhizosphere	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLRTDAWANGMIYERDGEKEAIRIMLRPLLAMSEQFDYVHYVCLRLLEALKILPALYLE
Ga0105242_117113291	3300009176	Miscanthus Rhizosphere	MRPILSPAEVLGLSGAALESRARSASHQVPDLVFARLAEHLRADAWSNRLIYEHEGVEEAVRIMLRPLLVMPEQLSYVHHVCLQLTEALKRLPGLYREDERVRRILAITKEEEAWFNATSMSAHERFTSLY
Ga0105347_10399881	3300009609	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLRTDAWANGMIYEREGEKEAIRIMLRPLLAMSEQFDYVHYVCLR
Ga0105252_101747292	3300009678	Soil	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALK
Ga0126377_114128242	3300010362	Tropical Forest Soil	MRPVLSPAETLGLSGAALDGRVRRAAHHVSDAIYARVAERLKADAIANELIYEREGVRDAILVMLRPLVAMREQLAYVHHVCLQIQEALKSV
Ga0126379_126121242	3300010366	Tropical Forest Soil	MRPVLSPAESLGLSGATLEGRIRRAATHVADATFARIAERLKADAFANEMIYERDGVREPIRVMLRPLLAM
Ga0134125_109958961	3300010371	Terrestrial Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLGDERIRSILAI
Ga0126381_1000608431	3300010376	Tropical Forest Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLEDARANEMIYEHEGVQEPVRLMLRPLLVMQEQLSYLHHVCL
Ga0134124_105733471	3300010397	Terrestrial Soil	MRPILSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLGDER
Ga0134127_106846781	3300010399	Terrestrial Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLRVDAWGNGMIYEREGEKEPIRIMLRPLLAMSEQFDYVHYVCLRLLEALKILPALYLEDEK
Ga0134122_132022161	3300010400	Terrestrial Soil	MRPVLSPAESLGLSGAALDGRIRRAAHHVTDAIYARLAERLLGDALANQMIYERDGKREPISVMLRP
Ga0134121_130346492	3300010401	Terrestrial Soil	MRPVLSPAESLGLSGAALDGRIRRAAHHVTDAIYARLAERLLGDALANQMIYEREGKREP
Ga0134123_128615451	3300010403	Terrestrial Soil	MRPVLSPAESLGLSGAALDGRIRRAAHHVTDAIYARLAERLLGDALANQMIYERDGKREPISVMLRPLVAMREQLAYVHHVCLHILEAVKRFPALYLADERIRHILAVTPNEDRW
Ga0138514_1000854312	3300011003	Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQEQLSYV
Ga0137313_10706221	3300011403	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIADRLKADAFANGMIYERDGEREAIRIMLRPLLAMNEQLDYVHYVCLRLIEALKILPQLYLDDEKIRKIIAISPDEEIWL
Ga0137340_10967241	3300011405	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLRTDAWANGMIYEREGEKEAIRIMLRPLLAMSEQFDYVHYVCLRLLEALKILPALFLEDEKIRKIIAISP
Ga0137436_11569282	3300011423	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYERDGKKEPIRVMLRPLLAMSEQFDYVHYVCLRLTEALKILPQLYLDDEKIRKIIAIS
Ga0137423_10659033	3300011430	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIADRLKADAFANGMIYERDGEREAIRIMLRPLLA
Ga0137350_10985142	3300012166	Soil	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLLEALKILPALFLEDEKIRKIIAISP
Ga0137319_10401371	3300012167	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIADRLKADAFANGMIYERDGEREAIRIMLRPLLAMNEQLDYVHY
Ga0137362_100622711	3300012205	Vadose Zone Soil	MRPVLSPAESLGLSGATLEGRVRRAATHVADATFARIAERLKTDAFANEMIYERDGAREPIRVMLRPLLAMNEQFDYVHYVCLQLSEALRRLPSL
Ga0137381_115928621	3300012207	Vadose Zone Soil	MAPVLSPAESLGLSGAALEARVRRAAVHIPDAVFARVAERLRADALANQMIYEHEGKIEPLRIMLRPLLAMRDQLAYVHHVCLQITEALKRFPALYLEDA
Ga0157291_101448471	3300012902	Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERLRADARTNQMVYEHEGVEGPIRLMLRPLLVMQEQLSYVHH
Ga0137407_111685111	3300012930	Vadose Zone Soil	MPPVLSPAESLGLAGATLDGRVRRATNHVSDGTFARIGERLRADAFANQMIYEREGVIEPVRVMLRPL
Ga0164301_111262591	3300012960	Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERLRVDAWTNQMVYEHEGVEEP
Ga0164309_115792141	3300012984	Soil	MPTILSPAESLGLAGASLEARVRRAAVHIPDGVFARIAERLKADAFANQMIYEHDGKIEPIRIMLRPLLAMRDQLGYVHHVCLRITEALKRFPALYLADPRIKSILAISPDEE
Ga0164307_113574951	3300012987	Soil	MLSPAESLGLSGATLEGRVRRAVHQVSDAVLQRIAQRLQADALTHEVIYEHEGVAEAVRIIPRPLLAMPEQLSYV
Ga0120179_10916921	3300013763	Permafrost	MRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERRRADARTNQMVYEHEGVEEPIRLMLRPLLVMQE
Ga0075341_11368911	3300014298	Natural And Restored Wetlands	MLSPAEALGLSGAALESRVRSAANQVADATMVRIAGRLNVDAGANEMVYERDGACETIQI
Ga0075354_10662851	3300014308	Natural And Restored Wetlands	MRPILSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYAHD
Ga0075352_11703761	3300014324	Natural And Restored Wetlands	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIDERLRADARINQMVYEHEGVEEPIRLM
Ga0163163_117571822	3300014325	Switchgrass Rhizosphere	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLGDERIR
Ga0157379_104181902	3300014968	Switchgrass Rhizosphere	MPPILSPAESLGLSGAALEARVRRAAVHIPDAVFGRIAEHLRADAVANQIIYEHEGRTEPVRIMLRPLLAMRDQLSYVHYVCLRITEALK
Ga0180075_11074051	3300015252	Soil	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARIAERLKADAFANGMIYEHDGAREAIRVMLRPLL
Ga0132257_1003431392	3300015373	Arabidopsis Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIATRLLADARANEMIYEHEGVQEPVRLMLRPLLV
Ga0182036_101944131	3300016270	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLEDARANEMVYEHQGVQEPVRLMLRPRLVMQEQLSYVHHVC
Ga0182041_117673121	3300016294	Soil	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAAHLRSDAGVNEMIYEYEGAQEPVRLMLRPLLVMQEQLSYVHHVCLQLIEA
Ga0182039_112146232	3300016422	Soil	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAAHLRSDAGVNEMIYEYEGAQEPVRL
Ga0182038_100912981	3300016445	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVYEHQGVQEPVRLMLRP
Ga0163161_113103802	3300017792	Switchgrass Rhizosphere	MRPILSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLVYEHNGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEAL
Ga0187776_100588242	3300017966	Tropical Peatland	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFTRIDERLRSDARTNQLIYEHEGVEE
Ga0184608_103323432	3300018028	Groundwater Sediment	MRPVLSPAEALGLSGATLEARIRRAANHVSDATFARIAERLRADARTNEMIYEHEGVQE
Ga0187787_102579422	3300018029	Tropical Peatland	MRPILSPAEALGLSGATLEARIRRAANHVSDTTFARIDERLRADARSNLMVYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLADQRIRKIVAITPDE
Ga0184629_106458301	3300018084	Groundwater Sediment	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLKADAFANGMIYERDGEREAIRIMLRPLLAMSEQLDYVHYVCLRLLEALKILPQLYLDD
Ga0190270_102033723	3300018469	Soil	MRPVLSPAESLGLSGATLEGRIRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDYVHYVCLRLIEALKILPQLYLDDE
Ga0190264_100054501	3300019377	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARIAERLKADAWSNSMIYEHNGEREAIRVMLRPLLAMNEQLDYVHYV
Ga0206356_115951271	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQGPVRLMLRPLLVMQ
Ga0210399_109592151	3300020581	Soil	MLSPAESLGLSGATLEGRVRRAMHQVSDAVLQRIAQRLQADALSHEVIYEHDGVPEAVRIMPRPLLAMPEQL
Ga0210399_109616002	3300020581	Soil	MPPVLSPAESLGLAGAALEARVRRAAVHIPDTVFARIAERLKADAFANQMIYEHHGKIEPIRIML
Ga0210383_111799362	3300021407	Soil	MPPVLSPAESLGLAGAALEARVRRAAVHIPDTVFARIAERLKADAFANQMIYEHHGKIEPIRI
Ga0126371_100949743	3300021560	Tropical Forest Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLPEDARANEMIYEHEGVQEPVRLMPRPLLVMQEQLSYLHHVCLQLIEALKR
Ga0247787_10493371	3300022893	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADALANEMIYEHEGVQEPVRLMLRPLLVMQEQL
Ga0207696_10449112	3300025711	Switchgrass Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVREPVR
Ga0207660_116821331	3300025917	Corn Rhizosphere	MRPILSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRV
Ga0207650_113120651	3300025925	Switchgrass Rhizosphere	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIQ
Ga0207709_111481122	3300025935	Miscanthus Rhizosphere	MRPVLSPAESLGLSGATLEGRIRRAATHVADATFARIEERLKADAFANEMIYERDGAREAIRVMLRPLLAMNEQFDYVHYVCLQLTEALKQLPALYLANKSIAKIIA
Ga0207665_108448921	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVLSPAESLGLAGATLDGRVRRAANHVSDTTFARIDERLRADAFANQMIYEREGVIEPVRVMLRPLLAMREQLAYVHYVCLQLTEALKLFPQRAHRIFTF
Ga0207679_121820511	3300025945	Corn Rhizosphere	MRPVLSPAEVLGLSGAALEGRARSASHQVPDIVFARLAERLRADAWSNRLIYEHEGVEEAVRIMLRPLLVMPEQL
Ga0210145_10115052	3300025973	Natural And Restored Wetlands	MRPILSPAEALGLSGATLEARIRRAANHATDAAFARIDERLRADARTNQLIYEHEGVEEPIRLMLRPLLVMQE
Ga0207677_107631601	3300026023	Miscanthus Rhizosphere	MRPILSPAEALGLSGATLEGRIRRAAHHVPDATFARIAERLRDDAWANQMIYEHEGVEEAIRIMLRPLLVMPEQLSYVHHVCLQLI
Ga0207702_111934161	3300026078	Corn Rhizosphere	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRPLLVMQEQLSYVHHVC
Ga0207683_111856872	3300026121	Miscanthus Rhizosphere	MRPVLSPAESLGLSGAALDGRIRRAAHHVTDAIYARLAERLLGDALANQMIYEREGKREPISVMLRPLVAMREQLAYVHHVCLHILEAVKR
Ga0256814_10330852	3300026464	Sediment	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNRLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLADER
Ga0209731_10379411	3300027326	Forest Soil	VLSPTEALGLSGTALEGRIRRAAHHVPDAVFARLAEQLNTDAFASGMIYERDDKPEAVRIMLRPLLAMNEQISYVHYVCNQVNDALKCIPGLYL
Ga0209970_10860721	3300027614	Arabidopsis Thaliana Rhizosphere	VTRPVLSPAEALGLSGATLEARIRRAASHVSDTTFARIAARLLADARANEMIYEHEGVQEPIRLMLRPL
Ga0209073_105299262	3300027765	Agricultural Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNRLIYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLADERIRTIVAITP
Ga0265338_100450953	3300028800	Rhizosphere	MRSVLSPAETLGLSGATLEGRVRRAVHHVSDATFARLADRLRADALSNQMIYEHDGVEEAIRIMLRPLLVMPEQLSYVHHVCLQLIEALKRFPGLYLQDERIRR
Ga0307503_107758941	3300028802	Soil	MRSVLSPAEALGLSGATLEGRVRRAAHHVSDATFARLADRLRADAWASQMIYEHEGVQEAIRIMLRPLLVMPEQLSYVHHVCLQLIEALKRLPGLYLKDERIRRILAVHPDE
Ga0311365_102708651	3300029989	Fen	MRPVLSPAEALGLSGATLEARIRRATNYVTDATFARIDERLRADARTNQMIYEHEGVEEPIRLMLRPLLVMQEQ
Ga0311337_103466972	3300030000	Fen	MRPVLSPAEALGLSGATLEARIRRATNYVTDATFARIDERLRADARTNQMIYEHEGVEEP
Ga0310813_118327162	3300031716	Soil	MRPILSPAEVLGLSGAALEGRVRAASHDVPDLVFARLADRLRADAWSNRVIYEHEGAEEAIRIMLRPLLVMPEQLSYVHHVCLQLIEALKRL
Ga0310813_119587961	3300031716	Soil	VLRCSAMRPILSPAEVLGLSGAALESRVRSASHQVPDLVFARLADRLRADAWANRLIYEHEGVEEAVRIMLRPLLVMPEQLSYVHHVCSQLIEALKRLPGFYREDERVR
Ga0306917_114163551	3300031719	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVYEHQGVQEPVRLMLRPRLVMQEQLSYVHHVCLQ
Ga0306918_100198371	3300031744	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVYEHQGVQEPVRLMLRPRLVMQEQLSYV
Ga0318502_105412211	3300031747	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVYEHQGVQEPVRLM
Ga0307475_112061681	3300031754	Hardwood Forest Soil	MPPVLSPAEALGLSGAALEARVRRAAVHIPDAVFARVDEHLRADAVANMITYEHEGKIEPVRVMLRPLLAMR
Ga0318535_101960501	3300031764	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEIVYEHQGVQEPVRLMLRPRLVMQEQLSYVH
Ga0318521_100781431	3300031770	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVYEHQGVQEPVRLML
Ga0318543_102817592	3300031777	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLEDARANEMVYEHQGVQEPVRLMLRPRLVMQEQLSYVHH
Ga0310912_109031911	3300031941	Soil	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAAHLRSDAGVNEMIYEYEGAQEPVRLMLRPLLVMQEQLSYVHHVCLQ
Ga0310909_104606492	3300031947	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLEDARANEMVYEHQGVQEPVRLML
Ga0310902_101317082	3300032012	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAARLLADARANEMIYEHEGVQEPVRLMLRPLLVMQEQ
Ga0318558_105962992	3300032044	Soil	MRPILSPAEALGLSGATLEARIRRAANHVSDATFARIAAHLRSDAGVNEMIYEYEGAQEPVRLMLRPLLVMQEQLSY
Ga0318513_103668231	3300032065	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMV
Ga0310890_106529911	3300032075	Soil	MRPVLSPAESLGLSGATLEGRVRRAAHHVADPTFARISERLKADAFANGMIYEHDGVPEAIRVMLRPLLGMSEQFDY
Ga0307471_1018243191	3300032180	Hardwood Forest Soil	MRPVLSPAESLGLAGATLEGRIRRAATHVADATFARIAERLKADAFANEMIYERDGVREPIRVMLRPLLAMNEQFDYVHYVCLQLTEALKQLPSLYLADPAIAKI
Ga0307471_1021322631	3300032180	Hardwood Forest Soil	MRPVLSPAEALGLSGATLEARIRRAANHVTDATFARIDERLRVDAWTNQMVYEHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLI
Ga0310812_103395392	3300032421	Soil	VTRPVLSPAEALGLSGATLEARIRRAASHVSDTTFARIAARLLADARAKEMIYEHEGVQEPVRLMLRPLLVM
Ga0335070_110445772	3300032829	Soil	MRPVLSPAETLGLSGAALDGRVRRAAHHVSDAIYARVAERLKADAIANELIYEREGVRDAILIMLRPLVAMREQLAYTHHVCLRILEAVKRFPALYLEDPRIRKILAVTEDEDRW
Ga0318519_104035962	3300033290	Soil	VTRPILSPAEALGLSGATLEARIRRAANHVSDATFARIASRLLQDARANEMVY
Ga0316628_1028081631	3300033513	Soil	MRPVLSPAEALGLSGATLEGRIRRAAHHVSDATFARIADRLRADAWSNQMIYEHEGAQEAIRIMLRPLLVMPEQLSYVHHVCLQLIEALKRLPGLYLEDERIRQILAI
Ga0247830_106482711	3300033551	Soil	VTRPVLSPAEALGLSGATLEARIRRAANHVSDTTFARIAARLLADARANEMIYEHEGVQEPV
Ga0314870_027220_197_529	3300033760	Peatland	MRPVLSPAEALGLSGATLEARIRRAANHVTDAAFARIDERLRADARTNQLIYDHEGVEEPIRLMLRPLLVMQEQLSYVHHVCLQLIEALKRVPDLYLADERIRSILAITPD
Ga0370495_0239811_3_296	3300034257	Untreated Peat Soil	MRPVLSPAESLGLSGATLEGRVQRAAHAVADPTFARIAERLKADAWANSMIYEHNGEREAIRVMLRPLLAMNQQFDYVHYVCLRLIEALKILPQLYLD
Ga0373948_0022629_1017_1211	3300034817	Rhizosphere Soil	MPPILSPAESLGLSGAALEARVRRAAVHIPDAVFGRIAEHLRADAVANQIIYEHEGRTEPVRIML

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066045

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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