Metagenome / Metatranscriptome Family F065998

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065998
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	88 residues
Representative Sequence	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRL
Number of Associated Samples	108
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.46 %
% of genes near scaffold ends (potentially truncated)	98.43 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.213 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (46.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.480 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 76.74% β-sheet: 0.00% Coil/Unstructured: 23.26%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01967	MoaC	81.89
PF13177	DNA_pol3_delta2	10.24
PF02518	HATPase_c	2.36
PF00072	Response_reg	0.79
PF00196	GerE	0.79
PF13426	PAS_9	0.79
PF08447	PAS_3	0.79
PF01476	LysM	0.79
PF01464	SLT	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	81.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	70.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.57 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	70.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	65.35 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	65.35 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	65.35 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	65.35 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	65.35 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10097233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	896	Open in IMG/M
3300001686\|C688J18823_10075351	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300003319\|soilL2_10078500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5139	Open in IMG/M
3300003319\|soilL2_10174660	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300004479\|Ga0062595_100085392	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300005093\|Ga0062594_103400647	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005166\|Ga0066674_10539810	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005167\|Ga0066672_10321291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1008	Open in IMG/M
3300005167\|Ga0066672_10754589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300005172\|Ga0066683_10908879	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005175\|Ga0066673_10199433	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005175\|Ga0066673_10666570	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005180\|Ga0066685_10414267	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005181\|Ga0066678_10395532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	916	Open in IMG/M
3300005186\|Ga0066676_10252677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1152	Open in IMG/M
3300005186\|Ga0066676_10719723	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005186\|Ga0066676_11143447	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005446\|Ga0066686_11015537	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005450\|Ga0066682_10084131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1980	Open in IMG/M
3300005451\|Ga0066681_10782496	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005471\|Ga0070698_100469347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1195	Open in IMG/M
3300005536\|Ga0070697_100197036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1711	Open in IMG/M
3300005549\|Ga0070704_100358855	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300005556\|Ga0066707_10007777	All Organisms → cellular organisms → Bacteria	5065	Open in IMG/M
3300005556\|Ga0066707_10036051	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300005559\|Ga0066700_10620875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	752	Open in IMG/M
3300005569\|Ga0066705_10001158	All Organisms → cellular organisms → Bacteria	8889	Open in IMG/M
3300005713\|Ga0066905_101313102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300006046\|Ga0066652_100035372	All Organisms → cellular organisms → Bacteria	3627	Open in IMG/M
3300006175\|Ga0070712_101418145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300006854\|Ga0075425_100601776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1264	Open in IMG/M
3300006854\|Ga0075425_100713514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1151	Open in IMG/M
3300006854\|Ga0075425_101915633	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006914\|Ga0075436_100166133	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300007004\|Ga0079218_12816560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300009089\|Ga0099828_10783686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300009090\|Ga0099827_11312025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	630	Open in IMG/M
3300009137\|Ga0066709_102764612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300009815\|Ga0105070_1092726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300010069\|Ga0127467_111181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300010072\|Ga0127428_165723	Not Available	511	Open in IMG/M
3300010085\|Ga0127445_1056096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300010111\|Ga0127491_1138182	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300010117\|Ga0127449_1125019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300010124\|Ga0127498_1043238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300010127\|Ga0127489_1111135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300010127\|Ga0127489_1151859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300010133\|Ga0127459_1033691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	648	Open in IMG/M
3300010136\|Ga0127447_1108728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1022	Open in IMG/M
3300010142\|Ga0127483_1136147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300010147\|Ga0126319_1071077	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300010147\|Ga0126319_1146878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1188	Open in IMG/M
3300010329\|Ga0134111_10474450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300010362\|Ga0126377_12959570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300010373\|Ga0134128_10375558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1588	Open in IMG/M
3300010399\|Ga0134127_12510444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300012198\|Ga0137364_10027791	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300012198\|Ga0137364_10329992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1136	Open in IMG/M
3300012200\|Ga0137382_10532480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	836	Open in IMG/M
3300012202\|Ga0137363_11660931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300012203\|Ga0137399_11272309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300012205\|Ga0137362_10834818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300012208\|Ga0137376_10845570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300012208\|Ga0137376_11354882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300012209\|Ga0137379_11060514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300012211\|Ga0137377_10460202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1210	Open in IMG/M
3300012212\|Ga0150985_121265149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300012349\|Ga0137387_10297002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1168	Open in IMG/M
3300012349\|Ga0137387_11112099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300012355\|Ga0137369_10046362	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300012355\|Ga0137369_10052596	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300012358\|Ga0137368_10032255	All Organisms → cellular organisms → Bacteria	4719	Open in IMG/M
3300012358\|Ga0137368_10643778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	670	Open in IMG/M
3300012360\|Ga0137375_10694047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	832	Open in IMG/M
3300012373\|Ga0134042_1030175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300012379\|Ga0134058_1165382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300012380\|Ga0134047_1029626	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300012381\|Ga0134026_1209044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	719	Open in IMG/M
3300012388\|Ga0134031_1238557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300012392\|Ga0134043_1299852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1255	Open in IMG/M
3300012393\|Ga0134052_1038886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300012395\|Ga0134044_1088716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300012397\|Ga0134056_1358407	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1801	Open in IMG/M
3300012402\|Ga0134059_1328576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300012404\|Ga0134024_1241051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	620	Open in IMG/M
3300012409\|Ga0134045_1451267	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012532\|Ga0137373_10170991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1815	Open in IMG/M
3300012582\|Ga0137358_10162910	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300012582\|Ga0137358_10611413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300012918\|Ga0137396_10022757	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300012922\|Ga0137394_10384348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1197	Open in IMG/M
3300012923\|Ga0137359_11130364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300012930\|Ga0137407_11314930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300012976\|Ga0134076_10476891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300014166\|Ga0134079_10511899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300015052\|Ga0137411_1074535	All Organisms → cellular organisms → Bacteria	4261	Open in IMG/M
3300015052\|Ga0137411_1170204	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300015054\|Ga0137420_1121077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300015054\|Ga0137420_1465067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2306	Open in IMG/M
3300015245\|Ga0137409_10056098	All Organisms → cellular organisms → Bacteria	3722	Open in IMG/M
3300015359\|Ga0134085_10173988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300017657\|Ga0134074_1141643	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	838	Open in IMG/M
3300017659\|Ga0134083_10181980	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	862	Open in IMG/M
3300018028\|Ga0184608_10242724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300018070\|Ga0184631_10377651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300018082\|Ga0184639_10555054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300018433\|Ga0066667_10025221	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300018433\|Ga0066667_11764547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300018468\|Ga0066662_10753992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	937	Open in IMG/M
3300019233\|Ga0184645_1040482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1788	Open in IMG/M
3300019249\|Ga0184648_1220245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	861	Open in IMG/M
3300019259\|Ga0184646_1249412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	636	Open in IMG/M
3300020022\|Ga0193733_1173251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300022195\|Ga0222625_1775206	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	939	Open in IMG/M
3300024330\|Ga0137417_1190941	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300026297\|Ga0209237_1229967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	574	Open in IMG/M
3300026310\|Ga0209239_1270604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300026318\|Ga0209471_1225663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	682	Open in IMG/M
3300026523\|Ga0209808_1269683	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300026528\|Ga0209378_1030107	All Organisms → cellular organisms → Bacteria	2871	Open in IMG/M
3300026540\|Ga0209376_1386754	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026552\|Ga0209577_10695993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300027663\|Ga0208990_1058623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1135	Open in IMG/M
3300028536\|Ga0137415_10032193	All Organisms → cellular organisms → Bacteria → Proteobacteria	5159	Open in IMG/M
3300030939\|Ga0138303_1346831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300034671\|Ga0314796_004573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1790	Open in IMG/M
3300034673\|Ga0314798_005758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Host-Associated	Host-Associated	3.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.98%
Aquatic	Environmental → Aquatic	7.09%
Plants	Host-Associated → Plants	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.98%
Freshwater	Environmental → Aquatic → Freshwater	4.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.15%
Sediment	Environmental → Aquatic → Sediment	2.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.31%
Loam	Environmental → Terrestrial → Soil → Loam	7.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.57%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.15%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	22.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.72%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.15%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.15%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.36%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010069	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100972333	3300001305	Soil	MQTRTQRLILRGGMVVLAALLVSTVGGWAGGTTTDSERVPASGSDLLGELRALRQQLDAKQGELEVARLQLDRVDAI
C688J18823_100753511	3300001686	Soil	MQTRTQRLILRGGMVVLAALLVSTVGGWAGGTTTDSERVPASGSDLLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVY
soilL2_100785001	3300003319	Sugarcane Root And Bulk Soil	MQTKTQRLMLRGGMIALAVLLVSTVGGWAGGTTTDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYKLPADMATAVYDVALSE
soilL2_101746603	3300003319	Sugarcane Root And Bulk Soil	MKLDAGAVGSLESEQERSMHTKTQRLLLRGGMIALAVLLVSTVGGWAGGTTTDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSE
Ga0062595_1000853921	3300004479	Soil	MHTRTQRLMIRGGMIVLAALLVSTVGGWAGGTTADTERAPASGTELLGELRSLRQQLDAKQGELEVARLQL
Ga0062594_1034006471	3300005093	Soil	MQTRTQRLILRGGMVVLAALLVSTVGGWAGSTTTSSERTPASGSDVLGELRTLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPAD
Ga0066674_105398102	3300005166	Soil	MQESHVDSRWDVELERGSMHTRTKRLMLRGGMIVLAALLVSTVGGWAGGTTADSERAPASGTELLGELRALRQQLDAKQGELEVARLQLDRVDAIM
Ga0066672_103212913	3300005167	Soil	MQTKTQRLMLRGGMIVLAALLVSTVGGWAGGTTTDTERAPVSGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALS
Ga0066672_107545892	3300005167	Soil	MQTKTQRLVVRGGIIVLAALLVSTVGGWAGGTTTDADRAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPADMATAVYDVALS
Ga0066683_109088791	3300005172	Soil	MHTRTQRLILRGGIIVLAALLISTVGGWAGGTTSDAERVPASGSELLGELRALRQQLDAKQGELEVARLQLD
Ga0066673_101994331	3300005175	Soil	MQTKTQRLMLRGGMIVLAGLLVSTVGGWAGGTTTEAERVPASGAELLGELRALQQQLDAKQGELEVAHLQLDRVDAIMQYSTHYRLPADMATAVYDVAL
Ga0066673_106665701	3300005175	Soil	MQTRTQRLLLRGGLIVLAAVLVSTVGAWAGDTTTDADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYKLPADMAT
Ga0066685_104142673	3300005180	Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDR
Ga0066678_103955323	3300005181	Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQ
Ga0066676_102526773	3300005186	Soil	MLDLQEVNEQGRTMQTKTQRLILRGGMIVLAALLISTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLD
Ga0066676_107197231	3300005186	Soil	MQAKTQRLVVRGGILVLAALLVSTVGGWAGGTTTDADRAPASGSELVGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPADMATAVYDVALSE
Ga0066676_111434472	3300005186	Soil	MHTRTQRLILRGGLIVLAAVLVSTVGAWAGDTTSEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRL
Ga0066686_110155372	3300005446	Soil	MQESHVDSRWDVELERGSMHTRTKRLMLRGGMIVLAALLVSTVGGWAGGTTADSERAPASGTELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYS
Ga0066682_100841313	3300005450	Soil	MLDLQEVDKQGRTMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALS
Ga0066681_107824961	3300005451	Soil	MQESHVDSRWDVELERGSMHTRTKRLMLRGGMIVLAALLVSTVGGWAGGTTADSERAPASGTELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAV
Ga0070698_1004693471	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPQVGAGRWVSQERGMNTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRVPATGSELLGELRDLRQQLDAKQGELDVARLQLDRANAIIQY
Ga0070697_1001970363	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTAPQLGAGRWDSQERGMHTKTQRLMLRGGMILLGALLVSTVGGWARGASADADRAPTSGTEVLGELRALRQQLDAKQGELEVARLQ
Ga0070704_1003588553	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRIEAAAVGLPESEMERSMQTKTQRLVLRGGMIVLAALLVSTVGGWAGGTTTDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSSHYKL
Ga0066707_100077776	3300005556	Soil	MLDLQEVNEQGRTMQTKTQRLILRGGMIVLAALLISTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAV
Ga0066707_100360511	3300005556	Soil	MLDSQEVAEHGRSMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDR
Ga0066700_106208752	3300005559	Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSE
Ga0066705_100011581	3300005569	Soil	MQTKTQRLVVRGGIIVLAALLVSTVGGWAGGTTTDADRAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQ
Ga0066905_1013131022	3300005713	Tropical Forest Soil	MHTRTQRLILRGGMVVLAALLVSTVGGWAGSTTTDSERAPASGTELLSELRGLRQQLDAKQGELEVARLQLDRVDAIMQY
Ga0066652_1000353721	3300006046	Soil	MHTRTQRLILRGGLIVLAAVLVSTVGAWAGDTTSEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLD
Ga0070712_1014181451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVAR
Ga0075425_1006017761	3300006854	Populus Rhizosphere	MHTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMA
Ga0075425_1007135143	3300006854	Populus Rhizosphere	MHTKTQRLILRGGILVLAALLISTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMA
Ga0075425_1019156331	3300006854	Populus Rhizosphere	MHTKTQRLVVRGGIIVLAALLVSTVGGWAGGTTTDADRAPASGSELLGELRSIRQQLDAKQGELEVARLQLDRVNAIMQ
Ga0075436_1001661333	3300006914	Populus Rhizosphere	MQARTQRLILRGGMIVLAAVLVSTVGAWAGGTTTEADRTPTSGPELLGELRSLRQQLDAKQGELEVARLQLDRVD
Ga0079218_128165602	3300007004	Agricultural Soil	MQTKTQRLMLRGGMIALAVLLVSTVGGWAGGTTTDAERAPVSGTEALSELRALRQQLDAKQGELEVARLQLNRVDAIMQYSTHYKLP
Ga0099828_107836863	3300009089	Vadose Zone Soil	MLRGGMIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYST
Ga0099827_113120251	3300009090	Vadose Zone Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYR
Ga0066709_1027646122	3300009137	Grasslands Soil	MLDSQEVDEQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQ
Ga0105070_10927261	3300009815	Groundwater Sand	MIVLAALLVSTVGGWAGGTTTDAERAPSSGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHY
Ga0127467_1111811	3300010069	Grasslands Soil	MQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIM
Ga0127428_1657231	3300010072	Grasslands Soil	MQAKTQRLVVRCGILVLAALLVSTVGGWAGGTTTDAERAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPADMA
Ga0127445_10560961	3300010085	Grasslands Soil	MQTKTQRLILRRGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSE
Ga0127491_11381822	3300010111	Grasslands Soil	MQAKTQRLVVRGGILVLAALLVSTVGGWAGGTTTDAERAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPAD
Ga0127449_11250192	3300010117	Grasslands Soil	MLDLQEVNEQGRTMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVA
Ga0127498_10432382	3300010124	Grasslands Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADIATAVY
Ga0127489_11111351	3300010127	Grasslands Soil	MLDSQEVDEQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYD
Ga0127489_11518591	3300010127	Grasslands Soil	LIVLAAVLVSTVGAWAGDTTTEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPAD
Ga0127459_10336911	3300010133	Grasslands Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPAD
Ga0127447_11087283	3300010136	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLISTVGGWAGGTTTDTKRAPASGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAI
Ga0127483_11361472	3300010142	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAERAPASGTELLGELRSLRQQLDAKQGELEFARLQLDRVDAIMQYS
Ga0126319_10710772	3300010147	Soil	LILRGGLIVLAAVLVSTVGAWAGDTTSEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQPPRRRHHAVLD
Ga0126319_11468783	3300010147	Soil	MQTKTQRLILRGGMIALAVLLVSTVGGWAGGTTTDAERAPASGAELLGELRSLRQQLDAKQGELEVARLQ
Ga0134111_104744501	3300010329	Grasslands Soil	MHTKTQRLMLRGGMILLGALLVSTVGGWARGASADAERTPASGPELLGELRALRQELDAKQGELDVARLQLDRANAI
Ga0126377_129595702	3300010362	Tropical Forest Soil	LILRGGIIVLAAVLVSTVGAWAGGTTTEADRVPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYST
Ga0134128_103755583	3300010373	Terrestrial Soil	MIVLAALLVSTVGGWAGGTTTDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQ
Ga0134127_125104442	3300010399	Terrestrial Soil	MHTKTQRLMVRGGMILIGALLVSTVGGWARGAAADDDRVPASGSELLGELRDLRQQLDAKQGELDVARLQLERANAI
Ga0137364_100277913	3300012198	Vadose Zone Soil	LILRGGIIVLAALLISTVGGWAGGTTSDAERVPASGSELLGELRALRQQLDAKQGELEVARLQLDRVNAIMQYSTHYKLPADMATAVYDVALS*
Ga0137364_103299921	3300012198	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERASGSGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPA
Ga0137382_105324803	3300012200	Vadose Zone Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVAR
Ga0137363_116609312	3300012202	Vadose Zone Soil	MQTKTQRLVLRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLD
Ga0137399_112723092	3300012203	Vadose Zone Soil	MQTKTQRLILRGGIIVLAALLISTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQ
Ga0137362_108348181	3300012205	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTELLGELRSLRQQLDAKQGELEV
Ga0137376_108455701	3300012208	Vadose Zone Soil	MQTKTQRLIVRGGIIVLAALLISTVGGWAGGTTTDTERAPASGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDA
Ga0137376_113548822	3300012208	Vadose Zone Soil	MLDLQEVDEQGRTMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEGIDPG
Ga0137379_110605141	3300012209	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTSDTERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEGIDPGL
Ga0137377_104602023	3300012211	Vadose Zone Soil	MLDLQEVDKQGRTMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVA
Ga0150985_1212651491	3300012212	Avena Fatua Rhizosphere	MHTKTQRLILRGGMIVLAALLVSTVGGWAGGTTSDAERAPSSGNEVLGELRSLRQQLEAKQGDLEVARLQLDRVDAIMQYSTHYRLPADMATAV
Ga0137387_102970021	3300012349	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQ
Ga0137387_111120992	3300012349	Vadose Zone Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPAD
Ga0137369_100463624	3300012355	Vadose Zone Soil	MHTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRAPGAGGESAGTELLGELRGLRQQLDAKQGELEVARLQLERAN
Ga0137369_100525965	3300012355	Vadose Zone Soil	MHTKTQRLIVRGGIIVLAALLVSTVGGWAGGTTSDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIM
Ga0137368_100322551	3300012358	Vadose Zone Soil	MLDSQEGDEQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPAD
Ga0137368_106437782	3300012358	Vadose Zone Soil	MHTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRAPGSGSGTELLGELRGLRQQLDAKQGELEVARLQLERANAIIQYSG
Ga0137375_106940472	3300012360	Vadose Zone Soil	MHTKTQRLIVRGGIIVLAALLVSTVGGWAGGTTSDAERAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPAD
Ga0134042_10301752	3300012373	Grasslands Soil	LILRGGLIVLAAVLVSTVGAWAGDTTSEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHY
Ga0134058_11653822	3300012379	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYS
Ga0134047_10296261	3300012380	Grasslands Soil	MQAKTQRLVVRGGILVLAALLVSTVGGWAGGTTTDANRAPASGSELLGELRSLRQQLDAKQGELEVARL
Ga0134026_12090442	3300012381	Grasslands Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYS
Ga0134031_12385572	3300012388	Grasslands Soil	MQTKTQRLILRGGIIVLAALLISTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQY
Ga0134043_12998521	3300012392	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRV
Ga0134052_10388862	3300012393	Grasslands Soil	MLDSQEVDKQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALS
Ga0134044_10887162	3300012395	Grasslands Soil	LIVLAAVLVSTVGAWAGDTTTEADRAPASGPELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYD
Ga0134056_13584071	3300012397	Grasslands Soil	MQAKTQRLVVRGGILVLAALLVSTVGGWAGGTTTDAERAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQ
Ga0134059_13285762	3300012402	Grasslands Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYD
Ga0134024_12410512	3300012404	Grasslands Soil	MVDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQY
Ga0134045_14512671	3300012409	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVAR
Ga0137373_101709911	3300012532	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTH
Ga0137358_101629101	3300012582	Vadose Zone Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAV
Ga0137358_106114131	3300012582	Vadose Zone Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEGI
Ga0137396_100227571	3300012918	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSE
Ga0137394_103843483	3300012922	Vadose Zone Soil	MLDLQEVDEQGRTMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAV
Ga0137359_111303641	3300012923	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQSSTHYRLPADMATAVYDVALSEGIDPGL
Ga0137407_113149301	3300012930	Vadose Zone Soil	MHTKTQRLMLRGGMILLGALLVSTVGGWARGASADAERTPASGPELLGELRALRQELDAKQGELDVARLQLD
Ga0134076_104768911	3300012976	Grasslands Soil	MQTKTQRLVVRGGILVLAALLVSTVGGWAGGTTTDANRAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYSTHYRLPADMATAVYDVALSE
Ga0134079_105118991	3300014166	Grasslands Soil	MGMQARTQRLVVRGGMIVLAALLVSTVGGWAGGTTGASDTDRAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQ
Ga0137411_10745356	3300015052	Vadose Zone Soil	MQTKTQRLMLRGGMIVLAALLVSTVGGWAGGTTSDAERAPASGTEVLGELRALRQQLDAKQGELEVARLQ
Ga0137411_11702043	3300015052	Vadose Zone Soil	MLRGGMIVLAALLVSTVGGWAGGTTSDAERAPASGTEVLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALS
Ga0137420_11210771	3300015054	Vadose Zone Soil	MLDSQEVDEQGRIMQTKTQRLILRGGILVLAALLVSTVGGWAGGTTTDAERAPGSGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYST
Ga0137420_14650674	3300015054	Vadose Zone Soil	MQTKTQRLMLRGGMIVLAALLVSTVGGWAGGTTSDAERAPASGTEVLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPPTWRRQFMTSR*
Ga0137409_100560981	3300015245	Vadose Zone Soil	MQTKTQRLMLRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYR
Ga0134085_101739883	3300015359	Grasslands Soil	MQTKTQRLIVRGGIIVLAALLISTVGGWAGGTTTDTERAPASGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPA
Ga0134074_11416431	3300017657	Grasslands Soil	MKQGRIMQTKTQRLILRGGIIVLAALLISTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVA
Ga0134083_101819803	3300017659	Grasslands Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRL
Ga0184608_102427242	3300018028	Groundwater Sediment	MILVGALLVSTVGGWARGASADADRTPASGPELLGELRSLRQELDAKQGELDVARLQLERANAIIQYSA
Ga0184631_103776511	3300018070	Groundwater Sediment	MDTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRMPASGSELLGELRDLRQQLDAKQGELDVARLQLD
Ga0184639_105550542	3300018082	Groundwater Sediment	MQTKTQRLILRGGMIVLAALLVSTVGGWAGGTTTDAEPAPSSGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADLATA
Ga0066667_100252211	3300018433	Grasslands Soil	MIDGSLMQVRHATLAESRETGRNMQTKTQRLIVRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTEVLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEGI
Ga0066667_117645472	3300018433	Grasslands Soil	MQTKTQRLMLRGGMIVLAGLLVSTVGGWAGGTTTEAERVPASGAELLGELRALQQQLDAKQGELEVAHLQLDRVDAIMQYSTHY
Ga0066662_107539921	3300018468	Grasslands Soil	MQAKTQRLIVRGGIIVLAALLVSTVGGWAGSTTTDAERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYR
Ga0184645_10404821	3300019233	Groundwater Sediment	MQTKTQRLMLRGGIIVLAALLVSTVGGWAGGTTTDAERAPASGAELLGELRTLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYR
Ga0184648_12202451	3300019249	Groundwater Sediment	MQTRTQRLILRGGMIVLAALLVSTVGGWAGGTTTDTERASASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSE
Ga0184646_12494122	3300019259	Groundwater Sediment	MDTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRVPASGSELLGELRDLRQQLDAKQGELDVARLQLDRA
Ga0193733_11732512	3300020022	Soil	MHTKTQRLMLRGGMILIGALLVSTVGGWARGASADAERVPATGPELLGELRELRQQLDAKQGELDVARLQLDRANAIIQYS
Ga0222625_17752061	3300022195	Groundwater Sediment	MDTKTQRLMLRGGMILVGALLVSTVGGWARGASADADRTPASGSEVLGELRDLRQQLDAKQGELDVARLQLDRANAIIQYSG
Ga0137417_11909411	3300024330	Vadose Zone Soil	WGGMLDSQVVDEQGRIMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEGIDPGRRSVW
Ga0209237_12299671	3300026297	Grasslands Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLD
Ga0209239_12706041	3300026310	Grasslands Soil	MQARTQRLVVRGGMIVLAALLVSTVGGWAGGTTGASDTDRAPASGAELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYS
Ga0209471_12256632	3300026318	Soil	MQTTTQRLVVRGGIIVLAALLVSTVGGWAGGTTTDADRAPASGSELLGELRSLRQQLDAKQGELEVARLQLDRVNAIMQYST
Ga0209808_12696832	3300026523	Soil	MQTKTQRLMLRGGMIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAI
Ga0209378_10301071	3300026528	Soil	MLDSQEVAEHGRSMQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDAARAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALSEG
Ga0209376_13867542	3300026540	Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRLPADMATAVYDVALS
Ga0209577_106959932	3300026552	Soil	MQTKTQRLMLRGGMIVLAGLLVSTVGGWAGGTTTEAERVPASGAELLGELRALQQQLDAKQGELEVAHLQLDRVDAIM
Ga0208990_10586233	3300027663	Forest Soil	MQTKTQRLMLRGGMIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYST
Ga0137415_100321938	3300028536	Vadose Zone Soil	MQTKTQRLILRGGIIVLAALLVSTVGGWAGGTTTDTERAPASGTELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHYR
Ga0138303_13468311	3300030939	Soil	MQTRTQRLMLRGGMIVLAALLVSTVGGWAGGTTADSERAPASGSELLGELRALRQQLDAKQGELEVARLQLDRVDAIMQYSTHYRL
Ga0314796_004573_1538_1789	3300034671	Soil	MQTKTQRLMLRGGMITLAVLLVSTVGGWAGGTTTDAERAPATGAELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSTHY
Ga0314798_005758_1393_1659	3300034673	Soil	MQTKTQRLMLRGGMITLAVLLVSTVGGWAGGTTTDAERAPATGAELLGELRSLRQQLDAKQGELEVARLQLDRVDAIMQYSSHYKLPAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences