NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065914

Metagenome / Metatranscriptome Family F065914

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065914
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 71 residues
Representative Sequence VPHVRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Number of Associated Samples 113
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.52 %
% of genes near scaffold ends (potentially truncated) 27.56 %
% of genes from short scaffolds (< 2000 bps) 77.17 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.906 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.047 % of family members)
Environment Ontology (ENVO) Unclassified
(29.921 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.244 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.66%    β-sheet: 0.00%    Coil/Unstructured: 55.34%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF03979Sigma70_r1_1 12.60
PF04545Sigma70_r4 10.24
PF04542Sigma70_r2 8.66
PF00156Pribosyltran 4.72
PF13240zinc_ribbon_2 2.36
PF01040UbiA 0.79
PF07685GATase_3 0.79
PF02880PGM_PMM_III 0.79
PF00376MerR 0.79
PF13649Methyltransf_25 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 21.26
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 8.66
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 8.66
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 8.66
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.79
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.91 %
UnclassifiedrootN/A44.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090015|GPICI_8921364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1458Open in IMG/M
2228664021|ICCgaii200_c0962620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1338Open in IMG/M
3300000156|NODE_c0744245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria19143Open in IMG/M
3300000890|JGI11643J12802_10994656Not Available558Open in IMG/M
3300000956|JGI10216J12902_112351563Not Available542Open in IMG/M
3300001534|A15PFW1_10357284Not Available544Open in IMG/M
3300002070|JGI24750J21931_1073089Not Available562Open in IMG/M
3300002075|JGI24738J21930_10154941Not Available511Open in IMG/M
3300002568|C688J35102_119103296Not Available638Open in IMG/M
3300003324|soilH2_10032074All Organisms → cellular organisms → Bacteria2252Open in IMG/M
3300004153|Ga0063455_100681990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria688Open in IMG/M
3300004479|Ga0062595_100072492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1699Open in IMG/M
3300004479|Ga0062595_100449357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria946Open in IMG/M
3300004479|Ga0062595_101850529Not Available576Open in IMG/M
3300005328|Ga0070676_10284806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1115Open in IMG/M
3300005332|Ga0066388_100041290All Organisms → cellular organisms → Bacteria4566Open in IMG/M
3300005338|Ga0068868_100162696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1844Open in IMG/M
3300005341|Ga0070691_10089823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1513Open in IMG/M
3300005544|Ga0070686_100318649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium1158Open in IMG/M
3300005545|Ga0070695_100282199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1221Open in IMG/M
3300005545|Ga0070695_101366550Not Available587Open in IMG/M
3300005614|Ga0068856_102690373Not Available503Open in IMG/M
3300005718|Ga0068866_10122030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1469Open in IMG/M
3300005764|Ga0066903_107623052Not Available558Open in IMG/M
3300005841|Ga0068863_100521375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1172Open in IMG/M
3300006196|Ga0075422_10397059Not Available609Open in IMG/M
3300006804|Ga0079221_10657942Not Available720Open in IMG/M
3300006806|Ga0079220_11620103Not Available562Open in IMG/M
3300006844|Ga0075428_102729043Not Available503Open in IMG/M
3300006845|Ga0075421_100419737All Organisms → cellular organisms → Bacteria1603Open in IMG/M
3300006854|Ga0075425_101580196Not Available739Open in IMG/M
3300006904|Ga0075424_102199318Not Available581Open in IMG/M
3300007076|Ga0075435_100791181Not Available826Open in IMG/M
3300009092|Ga0105250_10068379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1434Open in IMG/M
3300009093|Ga0105240_10313797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1789Open in IMG/M
3300009094|Ga0111539_11235837Not Available867Open in IMG/M
3300009100|Ga0075418_11379508Not Available764Open in IMG/M
3300009147|Ga0114129_10292195All Organisms → cellular organisms → Bacteria2174Open in IMG/M
3300009148|Ga0105243_11168788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria781Open in IMG/M
3300009789|Ga0126307_10004106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10058Open in IMG/M
3300009840|Ga0126313_10042275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3180Open in IMG/M
3300010039|Ga0126309_10064958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1788Open in IMG/M
3300010039|Ga0126309_10225080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1051Open in IMG/M
3300010039|Ga0126309_10242676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1017Open in IMG/M
3300010039|Ga0126309_10360049Not Available859Open in IMG/M
3300010039|Ga0126309_10609007Not Available689Open in IMG/M
3300010040|Ga0126308_10001415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9536Open in IMG/M
3300010166|Ga0126306_11658475Not Available533Open in IMG/M
3300010400|Ga0134122_10470768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium1129Open in IMG/M
3300011987|Ga0120164_1037817Not Available722Open in IMG/M
3300011991|Ga0120153_1066455Not Available626Open in IMG/M
3300011994|Ga0120157_1005327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3779Open in IMG/M
3300011999|Ga0120148_1006049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3286Open in IMG/M
3300012010|Ga0120118_1003746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4913Open in IMG/M
3300012011|Ga0120152_1007009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5173Open in IMG/M
3300012200|Ga0137382_10581137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria799Open in IMG/M
3300012204|Ga0137374_10000772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria34344Open in IMG/M
3300012208|Ga0137376_10745932Not Available844Open in IMG/M
3300012490|Ga0157322_1038740Not Available540Open in IMG/M
3300012496|Ga0157353_1001067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1512Open in IMG/M
3300012503|Ga0157313_1041288Not Available567Open in IMG/M
3300012915|Ga0157302_10529149Not Available515Open in IMG/M
3300013096|Ga0157307_1054015Not Available759Open in IMG/M
3300013102|Ga0157371_11163009Not Available593Open in IMG/M
3300013294|Ga0120150_1001969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5347Open in IMG/M
3300013297|Ga0157378_10707857Not Available1027Open in IMG/M
3300013306|Ga0163162_10660099Not Available1169Open in IMG/M
3300013763|Ga0120179_1006205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3296Open in IMG/M
3300014056|Ga0120125_1032448Not Available1121Open in IMG/M
3300014058|Ga0120149_1037599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1192Open in IMG/M
3300014150|Ga0134081_10072089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1057Open in IMG/M
3300014497|Ga0182008_10272313Not Available879Open in IMG/M
3300014829|Ga0120104_1037676Not Available892Open in IMG/M
3300015371|Ga0132258_10684493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2581Open in IMG/M
3300017792|Ga0163161_10406274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1093Open in IMG/M
3300017947|Ga0187785_10146878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria987Open in IMG/M
3300018000|Ga0184604_10018553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1612Open in IMG/M
3300018027|Ga0184605_10002376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6331Open in IMG/M
3300018027|Ga0184605_10007873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3973Open in IMG/M
3300018028|Ga0184608_10008141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3489Open in IMG/M
3300018031|Ga0184634_10477489Not Available559Open in IMG/M
3300018051|Ga0184620_10087150Not Available944Open in IMG/M
3300018052|Ga0184638_1182681Not Available744Open in IMG/M
3300018054|Ga0184621_10001886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5301Open in IMG/M
3300018061|Ga0184619_10014627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3151Open in IMG/M
3300018061|Ga0184619_10102635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1286Open in IMG/M
3300018073|Ga0184624_10011171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3131Open in IMG/M
3300018074|Ga0184640_10226934Not Available846Open in IMG/M
3300018081|Ga0184625_10079029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1681Open in IMG/M
3300019279|Ga0184642_1323882Not Available845Open in IMG/M
3300020018|Ga0193721_1027218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1515Open in IMG/M
3300020081|Ga0206354_10663986Not Available695Open in IMG/M
3300021080|Ga0210382_10054883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1576Open in IMG/M
3300021344|Ga0193719_10014904All Organisms → cellular organisms → Bacteria3293Open in IMG/M
3300021560|Ga0126371_13875466Not Available504Open in IMG/M
3300022534|Ga0224452_1171193Not Available669Open in IMG/M
3300022534|Ga0224452_1173656Not Available663Open in IMG/M
3300025916|Ga0207663_10851171Not Available728Open in IMG/M
3300025961|Ga0207712_10152484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1787Open in IMG/M
3300027909|Ga0209382_11837909Not Available588Open in IMG/M
3300028708|Ga0307295_10094375Not Available803Open in IMG/M
3300028710|Ga0307322_10026723Not Available1351Open in IMG/M
3300028711|Ga0307293_10015436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2191Open in IMG/M
3300028713|Ga0307303_10015315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1416Open in IMG/M
3300028722|Ga0307319_10000062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria32510Open in IMG/M
3300028778|Ga0307288_10222524Not Available733Open in IMG/M
3300028778|Ga0307288_10272402Not Available668Open in IMG/M
3300028782|Ga0307306_10245482Not Available523Open in IMG/M
3300028784|Ga0307282_10139558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1144Open in IMG/M
3300028810|Ga0307294_10038839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium1343Open in IMG/M
3300028811|Ga0307292_10067516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1364Open in IMG/M
3300028814|Ga0307302_10029580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2512Open in IMG/M
3300028824|Ga0307310_10004792All Organisms → cellular organisms → Bacteria5123Open in IMG/M
3300028828|Ga0307312_11179114Not Available506Open in IMG/M
3300028876|Ga0307286_10159409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria810Open in IMG/M
3300028876|Ga0307286_10217527Not Available695Open in IMG/M
3300028878|Ga0307278_10029823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2500Open in IMG/M
3300028881|Ga0307277_10239093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium800Open in IMG/M
3300030830|Ga0308205_1007375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1049Open in IMG/M
3300031091|Ga0308201_10052129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1030Open in IMG/M
3300031092|Ga0308204_10045184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1047Open in IMG/M
3300031092|Ga0308204_10090577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria826Open in IMG/M
3300031092|Ga0308204_10137346Not Available713Open in IMG/M
3300031720|Ga0307469_11150631Not Available731Open in IMG/M
3300031938|Ga0308175_100045494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3756Open in IMG/M
3300031996|Ga0308176_10250522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1698Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.05%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment10.24%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost9.45%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.15%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.15%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.36%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.57%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.57%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.57%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.79%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.79%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001534Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011987Permafrost microbial communities from Nunavut, Canada - A20_80cm_0MEnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012490Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610Host-AssociatedOpen in IMG/M
3300012496Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610EnvironmentalOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014829Permafrost microbial communities from Nunavut, Canada - A10_35cm_6MEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030830Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPICI_004877502088090015SoilMSHGVASFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
ICCgaii200_096262032228664021SoilVPHLRQPAMSHGVASFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
NODE_0744245283300000156Sugar Cane Bagasse Incubating BioreactorVHLRPPSISHGVISFIWALVFGVYIWLGGVAVGVSGGTAFIVGAVVGFLVYVFVMVYGTDEPARRPRRADRR*
JGI11643J12802_1099465613300000890SoilVPHLRQPAMSHGVASFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER*
JGI10216J12902_11235156323300000956SoilVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADVPRRQASRRARRAR*
A15PFW1_1035728413300001534PermafrostVPHIRLPAISHGVVSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFIYVMVYGVDVPRRQPGRRAGRLR*
JGI24750J21931_107308913300002070Corn, Switchgrass And Miscanthus RhizosphereVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRP
JGI24738J21930_1015494113300002075Corn RhizosphereVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQ
C688J35102_11910329613300002568SoilVPHLRPPATSPGTAAAIWALVFGLYVWLGGLAVGVSGGTAFIFGGVIGFLVFLAVLMYGADEPRRQPRRADRR*
soilH2_1003207423300003324Sugarcane Root And Bulk SoilVPHLRLPAIAHGVVSFVWALVFGLYVWLGGVAVGVKGGTAFIFGAVVGFLVYILVMVYGADEPRRQPRRADRR*
Ga0063455_10068199023300004153SoilMHLRGPSFSRGVTAFVWALVFGLYIWLGGLAVGVHGGTAFIFGAVVGFLVFLLVMAYGADAPTGQPRRADRR*
Ga0062595_10007249243300004479SoilVTSFIWGLLFGLYIWLGGLAVGVSGGTAFVFGAVFGFLIFLLVITYGADVPRRQASRRARRAR*
Ga0062595_10044935713300004479SoilVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPRRADRR*
Ga0062595_10185052923300004479SoilMRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR*
Ga0070676_1028480613300005328Miscanthus RhizosphereVPHVRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR*
Ga0066388_10004129053300005332Tropical Forest SoilVPHLRPPAISRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVFGFLIFLFVIAYGGNAPRRQASRRARRAR*
Ga0068868_10016269613300005338Miscanthus RhizosphereVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR*
Ga0070691_1008982323300005341Corn, Switchgrass And Miscanthus RhizosphereVPHVRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR*
Ga0070686_10031864913300005544Switchgrass RhizosphereVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQP
Ga0070695_10028219913300005545Corn, Switchgrass And Miscanthus RhizosphereVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAP
Ga0070695_10136655033300005545Corn, Switchgrass And Miscanthus RhizosphereISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR*
Ga0068856_10269037323300005614Corn RhizosphereVPHVRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFIFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR*
Ga0068866_1012203023300005718Miscanthus RhizosphereVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRHAGRPARRAR*
Ga0066903_10762305223300005764Tropical Forest SoilVHLRPPAISHGVIAFIWALVFFVYIWWGGIAVGYNGGVTFIFGAVVGFLVFLAVMVYGADEPQRQPRRADRR*
Ga0068863_10052137523300005841Switchgrass RhizosphereVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPR
Ga0075422_1039705913300006196Populus RhizosphereVPHLRPPAISRGVTSFIWGLVFGLYIWIGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADVPRRQASRRARRAR*
Ga0079221_1065794223300006804Agricultural SoilVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAGQPRRADRR*
Ga0079220_1162010323300006806Agricultural SoilVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPTAQPRRADRR*
Ga0075428_10272904323300006844Populus RhizosphereVPHLRPPSISRGVTSFIWGLLFGLYIWLGGLAVGVSGGTAFVFGAVFGFLIFLLVITYGADVPRRQASRRARRAR*
Ga0075421_10041973733300006845Populus RhizosphereVPHLRPPAISRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADVPRRQASRRARRAR*
Ga0075425_10158019623300006854Populus RhizosphereVPHLRPPAISRGVTSFIWGLLFGLYIWLGGLAVGVSGGTAFVFGAVFGFLIFLLVITYGADVPRRQASRRARRAR*
Ga0075424_10219931823300006904Populus RhizosphereVPHLRPPAISRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVIAYGADVPRRQGSRRARRAR*
Ga0075435_10079118113300007076Populus RhizosphereVPHLRPPAISRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADAPRRQASRRARRAR*
Ga0105250_1006837923300009092Switchgrass RhizosphereVPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVLGFLVFLLVMAFGADATTRQPSRADRR*
Ga0105240_1031379743300009093Corn RhizosphereMPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVLGFLVFLLVMAFGEDAPTRQPRRVDRR*
Ga0111539_1123583713300009094Populus RhizosphereVTSFIWGLLFGLYIWLGGLAVGVSGGTAFVFGAVFGFLIFLLVITYGADVPRRQASRRARRAR
Ga0075418_1137950813300009100Populus RhizosphereVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVIAYGADVPRRQGSRRARRAR*
Ga0114129_1029219533300009147Populus RhizosphereVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADAPRRQASRRARRAR*
Ga0105243_1116878833300009148Miscanthus RhizospherePVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPRRADRR*
Ga0126307_1000410623300009789Serpentine SoilVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGADVPRRQPGRRAERGR*
Ga0126313_1004227523300009840Serpentine SoilVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGADMPRRQPGRRAERGR*
Ga0126309_1006495813300010039Serpentine SoilVPHLRPPAISHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0126309_1022508033300010039Serpentine SoilVPHLRLPAISHGVISFVWALVFGLYIWLGGLAVGVNGGTAFIFGALAGFLVYLYVMVYGTDEPRRQPRRADRR*
Ga0126309_1024267633300010039Serpentine SoilVPHLRPPAISHGVISFVWALVFGLYIWLGGLAVGVNGGTAFIFGALAGFLVYLYVMVYGTDEPRRQPRRADRR*
Ga0126309_1036004913300010039Serpentine SoilVPHFRLPAFAHGFVSFVWALVFGLYIWLGGLAVGVSGGTAFIFGAVCGFLIYLLVMVYGSDEPRRQPRRADRR*
Ga0126309_1060900713300010039Serpentine SoilPPRPGTIRPVPHLRPPATSPGTAACIWALVFGLYVWLGGLAVGVKGGTAFIFGAVIGFLVFLAVLVYGADEPRRQPRRADRR*
Ga0126308_1000141573300010040Serpentine SoilVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER*
Ga0126306_1165847523300010166Serpentine SoilVPHFRLPAFSRGLVSLVWALVFGLYVWLGGVAVGVNGGTAFIFGAVVGFLVYLLVMAFGADEPRRQPRRADRR*
Ga0134122_1047076813300010400Terrestrial SoilMPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVLGFLVFLLVMAFGADVP
Ga0120164_103781713300011987PermafrostVPHLRAPAKSHGVGSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0120153_106645513300011991PermafrostLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0120157_100532733300011994PermafrostVPHFRLPAISHGVVSFLWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDLPRRQPGRRAERER*
Ga0120148_100604923300011999PermafrostVPHFRLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDLPRRQPGRRAERER*
Ga0120118_100374623300012010PermafrostVPHFRLPAISHGVVSFIWGLAFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0120152_100700933300012011PermafrostVPHFRLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0137382_1058113713300012200Vadose Zone SoilMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER*
Ga0137374_10000772223300012204Vadose Zone SoilVSFVWGLVFGLYIWLGGLAVGVTGATAFVFGAVAGFLIFLYVLVYGADVPRRQVGRRAGRGR*
Ga0137376_1074593223300012208Vadose Zone SoilVPHFRLPAISHGVVSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVSGFLIFLYVMVYGTDVPRRQPRRRAGRVR*
Ga0157322_103874013300012490Arabidopsis RhizosphereVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVIAYGADVPRRQRSRRARRAR*
Ga0157353_100106723300012496Unplanted SoilVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVIAYGADVPRRQGSRRARRTR*
Ga0157313_104128823300012503Arabidopsis RhizosphereRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVIAYGADVPRRQGSRRARRAR*
Ga0157302_1052914923300012915SoilVTSFIWGLLFGLYIWLGGLAVGVSGGTAFVFGAVFRFLICLLVITYGADVPRRQASRRARRAR*
Ga0164303_1058286513300012957SoilMSHGVVSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFIYVMVYGTDVPR
Ga0157307_105401513300013096SoilVPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVTCFLVYLLVVASGSVETSSQPRRADRR*
Ga0157371_1116300913300013102Corn RhizosphereAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR*
Ga0120150_100196963300013294PermafrostLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDLPRRQPGRRAERER*
Ga0157378_1070785713300013297Miscanthus RhizosphereAISRGVSSFIWRLVFGIYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR*
Ga0163162_1066009923300013306Switchgrass RhizosphereVPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVLGFLVFLLVMAFGADAASRQPRRADRR*
Ga0120179_100620513300013763PermafrostLPAISHGVVSFLWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDLPRRQPGRRAERER*
Ga0120125_103244823300014056PermafrostVPHFRLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRPERER*
Ga0120149_103759913300014058PermafrostQVSFLWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER*
Ga0134081_1007208923300014150Grasslands SoilMHLLAPSFSRGVTAFIWALVFGLYIWLGGLAVGVHGGTSFIFGAVVGFLVFLLVMAYGADAPTGQPRRAGRR*
Ga0182008_1027231323300014497RhizosphereVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQ
Ga0120104_103767623300014829PermafrostLPAISHGVVSFIWGLVFGLYIWFGGLAVGVSGATAFVFGAVAGFLIFIYVMVYGTDVPRRQPRRRAGRVR*
Ga0132258_1068449313300015371Arabidopsis RhizospherePSFSRGVGAFVWALMFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPRRADRR*
Ga0163161_1040627423300017792Switchgrass RhizosphereVPHLRAPAISRGVVALIWALVFGLYVWLGGLAVGVHGGTAFIFGAVLGFLVFLLVMAFGEDAPTRQPRRADRR
Ga0187785_1014687823300017947Tropical PeatlandVHLRPPAISHGVGAFIWALVFGLYIWLGGLAVGVDGGVSFIFGAVVGFLVFLAVMVYGADEPQSQPRRADRR
Ga0184604_1001855333300018000Groundwater SedimentMSHGVVSFIWGLAFGLYIRLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVERER
Ga0184605_1000237673300018027Groundwater SedimentVPHFRLPSISHGVVSFIWAVVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0184605_1000787343300018027Groundwater SedimentVPHLRQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVERER
Ga0184608_1000814123300018028Groundwater SedimentVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0184634_1047748923300018031Groundwater SedimentMRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0184620_1008715013300018051Groundwater SedimentVPHLRQPAISHGVISFIWALVFGIYVWLGGLAVGVHGGTAFLFGAVVGFVVYLLVMIYGAEEPRRQPRRADRR
Ga0184638_118268113300018052Groundwater SedimentVPHFRQPSISHGVVSFIWALVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYILVMVYGADEPRR
Ga0184621_1000188693300018054Groundwater SedimentVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVERER
Ga0184619_1001462753300018061Groundwater SedimentVPHLRQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRSVERER
Ga0184619_1010263523300018061Groundwater SedimentVPHFRLPAISHGVVSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVSGFLIFLYVMVYGTDVPRRHPRRRADRVR
Ga0184624_1001117123300018073Groundwater SedimentVSHRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR
Ga0184640_1022693413300018074Groundwater SedimentVPHMRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0184625_1007902923300018081Groundwater SedimentVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR
Ga0184642_132388213300019279Groundwater SedimentVPHFRLPSISHGVVSFIWALVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0193721_102721823300020018SoilMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRSVERER
Ga0206354_1066398613300020081Corn, Switchgrass And Miscanthus RhizosphereVPHLRQPSFSRGVGAFVWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPRRADRR
Ga0210382_1005488313300021080Groundwater SedimentVPHFRLPAISHGVVSFVWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRAERER
Ga0193719_1001490413300021344SoilMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVERER
Ga0126371_1387546613300021560Tropical Forest SoilRPPAISHGVIAFIWALVFFVYIWWGGIAVGYNGGVTFIFGAVVGFLVFLAVMVYGADEPQRQPRRADRR
Ga0224452_117119323300022534Groundwater SedimentVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0224452_117365613300022534Groundwater SedimentVPHLRQPAISHGVISFIWALVFGIYVWLGGLAVGVHGGTAFLFGAVVGFVVYLLVMIYGAEEPRR
Ga0207663_1085117113300025916Corn, Switchgrass And Miscanthus RhizosphereVPHVRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0207712_1015248413300025961Switchgrass RhizosphereVSHLRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGR
Ga0209382_1183790913300027909Populus RhizosphereVPHLRPPAISRGVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADVPRRQASRRARRAR
Ga0307295_1009437533300028708SoilMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0307322_1002672333300028710SoilVPHLRQPAMSHGVVSFIWGLAFGLYIWLGALAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0307293_1001543613300028711SoilVPHFRLPSISHGVVSFIWAVVFGLYVWLGGLAVGVSGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0307303_1001531523300028713SoilVPHLRQPATSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0307319_10000062243300028722SoilVPHFRLPAISRGVVSFIWALVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYILVMVYGADEPRRQPRRADRR
Ga0307288_1022252413300028778SoilQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVGGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0307288_1027240213300028778SoilAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0307306_1024548213300028782SoilAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQRGRPARRAR
Ga0307282_1013955813300028784SoilVPHLRQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0307294_1003883933300028810SoilVSHRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPAGRARGL
Ga0307292_1006751623300028811SoilVPHFRLPSISHGVVSFIWALVFGLYLWLGGLAIGLNGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0307302_1002958043300028814SoilVSHRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0307310_1000479223300028824SoilVPHFRLPSISHGVVSFIWALVFGLYVWLGGLAVGVSGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0307312_1117911413300028828SoilLRRGRVPPVSHRAPAISRGVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR
Ga0307286_1015940913300028876SoilVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR
Ga0307286_1021752713300028876SoilMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVE
Ga0307278_1002982313300028878SoilHFRLPSISHGVVSFIWALVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYIVVMVYGADEPRRQPRRADRR
Ga0307277_1023909313300028881SoilMAPLRPPSIAHGVLSFIWGLVFGLYVWLGSLAVGVEGATAFIVGAVVGAGTFLYVRIYGVERPRRQPGRRAGRAR
Ga0308205_100737513300030830SoilRQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRSVERER
Ga0308201_1005212913300031091SoilHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPGRRVERER
Ga0308204_1004518413300031092SoilRQPAMSHGVVSFIWGLAFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLYVMVYGTDVPRRQPRRRVERER
Ga0308204_1009057723300031092SoilPAISRGVSSFIWGLLFGLYIWLGGLAVGVSGATAFVFGAVAGFLIFLLVMLYGADEPRRQAGRPARRAR
Ga0308204_1013734623300031092SoilVPHFRLPSISHGVVSFIWAVVFGLYVWLGGLAVGVNGGTAFIFGAVVGFLVYILVMVYGADEPRRQPRRADRR
Ga0307469_1115063123300031720Hardwood Forest SoilVTSFIWGLVFGLYIWLGGLAVGVSGGTAFVFGAVCGFLIFLFVITYGADVPRRQASRRARRAR
Ga0308175_10004549433300031938SoilVSSFIWGLVFGLYIWLGGLAVGVSGATAFVFGAVAAFLIFLLVMLYGADEPRRQPGRPARRAR
Ga0308176_1025052223300031996SoilVPHLRQPSFSRGVGAFIWALVFGLYIWLGGLAVGVAGGTAFIFGALIGFLVFLLVMAYGAGAPAAQPRRADRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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