Metagenome / Metatranscriptome Family F065666

Basic Information
Family ID	F065666
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	46 residues
Representative Sequence	MTREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEE
Number of Associated Samples	101
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.98 %
% of genes near scaffold ends (potentially truncated)	22.05 %
% of genes from short scaffolds (< 2000 bps)	83.46 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Unclassified (38.583 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (18.898 % of family members)
Environment Ontology (ENVO)	Unclassified (65.354 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.402 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.44% β-sheet: 16.44% Coil/Unstructured: 67.12%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF14090	HTH_39	4.72
PF00145	DNA_methylase	3.15
PF07486	Hydrolase_2	3.15
PF00589	Phage_integrase	1.57
PF09339	HTH_IclR	0.79
PF11753	DUF3310	0.79
PF02511	Thy1	0.79
PF03592	Terminase_2	0.79
PF06568	DUF1127	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	3.15
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	3.15
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.79
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.79
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.42 %
Unclassified	root	N/A	38.58 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	52.76 %
Unclassified	root	N/A	38.58 %
cellular organisms	root	All Organisms → cellular organisms	8.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	18.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.66 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	18.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	18.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.57 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.15 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	8.66 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.15 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.79 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.79 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Roseobacter phage CRP-13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	7.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.15 %
Zobellviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Roseobacter phage CRP-6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	0.79 %
Boseongicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Boseongicola	0.79 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Roseobacter phage CRP-13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	7.87 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	3.15 %
Cobavirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae	2.36 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	0.79 %
Boseongicola aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Boseongicola → Boseongicola aestuarii	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Roseobacter phage CRP-6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Roseobacter phage CRP-13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	7.87 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	3.15 %
Veravirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus	2.36 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	0.79 %
Boseongicola aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Boseongicola → Boseongicola aestuarii	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Roseobacter phage CRP-6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.07 %
Roseobacter phage CRP-13	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	7.87 %
Flavobacteriales bacterium TMED228	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	3.15 %
Roseobacter phage CRP-4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-4	0.79 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	0.79 %
Boseongicola aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Boseongicola → Boseongicola aestuarii	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Roseobacter phage CRP-6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	0.79 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10111146	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300000928\|OpTDRAFT_10031160	Not Available	695	Open in IMG/M
3300000947\|BBAY92_10022528	All Organisms → Viruses → Predicted Viral	1712	Open in IMG/M
3300000947\|BBAY92_10203778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	515	Open in IMG/M
3300000973\|BBAY93_10154614	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	576	Open in IMG/M
3300001352\|JGI20157J14317_10133481	Not Available	808	Open in IMG/M
3300001938\|GOS2221_1009916	All Organisms → Viruses → Predicted Viral	1685	Open in IMG/M
3300001963\|GOS2229_1042523	Not Available	1755	Open in IMG/M
3300003346\|JGI26081J50195_1000875	Not Available	12327	Open in IMG/M
3300003427\|JGI26084J50262_1096169	Not Available	611	Open in IMG/M
3300003617\|JGI26082J51739_10067247	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300003620\|JGI26273J51734_10068808	All Organisms → Viruses → Predicted Viral	1053	Open in IMG/M
3300004448\|Ga0065861_1066077	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	808	Open in IMG/M
3300004457\|Ga0066224_1009333	All Organisms → Viruses → Predicted Viral	3255	Open in IMG/M
3300006027\|Ga0075462_10003593	Not Available	5026	Open in IMG/M
3300006029\|Ga0075466_1048863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	1255	Open in IMG/M
3300006029\|Ga0075466_1196730	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	501	Open in IMG/M
3300006752\|Ga0098048_1136273	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	734	Open in IMG/M
3300006789\|Ga0098054_1353898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	521	Open in IMG/M
3300006810\|Ga0070754_10196756	Not Available	941	Open in IMG/M
3300006869\|Ga0075477_10428850	Not Available	512	Open in IMG/M
3300006916\|Ga0070750_10020375	All Organisms → Viruses → Predicted Viral	3371	Open in IMG/M
3300006916\|Ga0070750_10181870	Not Available	939	Open in IMG/M
3300006924\|Ga0098051_1048930	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300007236\|Ga0075463_10070798	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300007344\|Ga0070745_1183791	Not Available	779	Open in IMG/M
3300007344\|Ga0070745_1278694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	599	Open in IMG/M
3300007345\|Ga0070752_1324355	Not Available	582	Open in IMG/M
3300007346\|Ga0070753_1178660	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	794	Open in IMG/M
3300007540\|Ga0099847_1182297	Not Available	616	Open in IMG/M
3300007640\|Ga0070751_1335405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Boseongicola → Boseongicola aestuarii	557	Open in IMG/M
3300009001\|Ga0102963_1051047	All Organisms → Viruses → Predicted Viral	1710	Open in IMG/M
3300009001\|Ga0102963_1149780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	941	Open in IMG/M
3300009071\|Ga0115566_10155870	All Organisms → Viruses → Predicted Viral	1421	Open in IMG/M
3300009079\|Ga0102814_10128448	All Organisms → Viruses → Predicted Viral	1387	Open in IMG/M
3300009086\|Ga0102812_10695718	Not Available	560	Open in IMG/M
3300009434\|Ga0115562_1042438	All Organisms → Viruses → Predicted Viral	2088	Open in IMG/M
3300009434\|Ga0115562_1132438	Not Available	948	Open in IMG/M
3300009436\|Ga0115008_11069080	Not Available	605	Open in IMG/M
3300009438\|Ga0115559_1118396	All Organisms → Viruses → Predicted Viral	1012	Open in IMG/M
3300009496\|Ga0115570_10232993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	819	Open in IMG/M
3300010150\|Ga0098056_1237171	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	606	Open in IMG/M
3300013010\|Ga0129327_10234125	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	934	Open in IMG/M
3300017719\|Ga0181390_1011255	All Organisms → Viruses → Predicted Viral	3130	Open in IMG/M
3300017719\|Ga0181390_1079235	Not Available	909	Open in IMG/M
3300017735\|Ga0181431_1123910	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	576	Open in IMG/M
3300017742\|Ga0181399_1018103	All Organisms → Viruses → Predicted Viral	1987	Open in IMG/M
3300017749\|Ga0181392_1123889	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	764	Open in IMG/M
3300017751\|Ga0187219_1000485	Not Available	19214	Open in IMG/M
3300017756\|Ga0181382_1083563	Not Available	880	Open in IMG/M
3300017776\|Ga0181394_1102502	Not Available	913	Open in IMG/M
3300017786\|Ga0181424_10042273	All Organisms → Viruses → Predicted Viral	1975	Open in IMG/M
3300017786\|Ga0181424_10468068	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	507	Open in IMG/M
3300017818\|Ga0181565_10249583	Not Available	1205	Open in IMG/M
3300017818\|Ga0181565_10573935	Not Available	726	Open in IMG/M
3300017818\|Ga0181565_10762473	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	610	Open in IMG/M
3300017950\|Ga0181607_10078486	All Organisms → Viruses → Predicted Viral	2139	Open in IMG/M
3300017951\|Ga0181577_10360928	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	931	Open in IMG/M
3300017951\|Ga0181577_10678699	Not Available	629	Open in IMG/M
3300017952\|Ga0181583_10845857	Not Available	536	Open in IMG/M
3300017967\|Ga0181590_10363633	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
3300018424\|Ga0181591_10200631	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	1570	Open in IMG/M
3300018426\|Ga0181566_10563606	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	794	Open in IMG/M
3300020054\|Ga0181594_10099097	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228	1687	Open in IMG/M
3300020388\|Ga0211678_10038038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	2331	Open in IMG/M
3300021085\|Ga0206677_10298862	Not Available	644	Open in IMG/M
3300021169\|Ga0206687_1261231	Not Available	501	Open in IMG/M
3300021185\|Ga0206682_10002097	Not Available	18661	Open in IMG/M
3300021185\|Ga0206682_10138387	All Organisms → Viruses → Predicted Viral	1160	Open in IMG/M
3300021347\|Ga0213862_10007015	All Organisms → Viruses → Predicted Viral	4470	Open in IMG/M
3300021371\|Ga0213863_10285650	Not Available	695	Open in IMG/M
3300021375\|Ga0213869_10005571	Not Available	7972	Open in IMG/M
3300021375\|Ga0213869_10158149	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300021957\|Ga0222717_10024067	All Organisms → Viruses → Predicted Viral	4063	Open in IMG/M
3300021957\|Ga0222717_10610754	Not Available	570	Open in IMG/M
3300021958\|Ga0222718_10095934	All Organisms → Viruses → Predicted Viral	1758	Open in IMG/M
3300021958\|Ga0222718_10121580	All Organisms → Viruses → Predicted Viral	1509	Open in IMG/M
3300021958\|Ga0222718_10514641	Not Available	576	Open in IMG/M
3300021964\|Ga0222719_10024457	All Organisms → Viruses → Predicted Viral	4798	Open in IMG/M
3300021964\|Ga0222719_10296135	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300022065\|Ga0212024_1032031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	894	Open in IMG/M
3300022178\|Ga0196887_1047724	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300022218\|Ga0224502_10406331	Not Available	529	Open in IMG/M
3300022934\|Ga0255781_10254027	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	824	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10224971	Not Available	916	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10281901	Not Available	732	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10377129	Not Available	600	Open in IMG/M
3300024228\|Ga0228633_1027135	All Organisms → Viruses → Predicted Viral	1542	Open in IMG/M
3300025083\|Ga0208791_1002163	Not Available	6750	Open in IMG/M
3300025083\|Ga0208791_1047318	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	759	Open in IMG/M
3300025084\|Ga0208298_1103080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	516	Open in IMG/M
3300025098\|Ga0208434_1112095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	522	Open in IMG/M
3300025483\|Ga0209557_1058057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300025543\|Ga0208303_1072775	Not Available	778	Open in IMG/M
3300025620\|Ga0209405_1106314	Not Available	795	Open in IMG/M
3300025620\|Ga0209405_1148794	Not Available	607	Open in IMG/M
3300025626\|Ga0209716_1055213	All Organisms → Viruses → Predicted Viral	1288	Open in IMG/M
3300025637\|Ga0209197_1069040	All Organisms → Viruses → Predicted Viral	1131	Open in IMG/M
3300025640\|Ga0209198_1073407	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	1157	Open in IMG/M
3300025652\|Ga0208134_1065885	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M
3300025652\|Ga0208134_1066736	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300025668\|Ga0209251_1052507	All Organisms → Viruses → Predicted Viral	1384	Open in IMG/M
3300025684\|Ga0209652_1005646	Not Available	8429	Open in IMG/M
3300025759\|Ga0208899_1064306	All Organisms → Viruses → Predicted Viral	1501	Open in IMG/M
3300025803\|Ga0208425_1004450	All Organisms → Viruses → Predicted Viral	4175	Open in IMG/M
3300025809\|Ga0209199_1241004	Not Available	599	Open in IMG/M
3300025810\|Ga0208543_1079928	Not Available	789	Open in IMG/M
3300025810\|Ga0208543_1095984	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus	709	Open in IMG/M
3300025870\|Ga0209666_1068244	All Organisms → Viruses → Predicted Viral	1837	Open in IMG/M
3300025879\|Ga0209555_10096607	All Organisms → Viruses → Predicted Viral	1274	Open in IMG/M
3300025886\|Ga0209632_10344904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300026187\|Ga0209929_1154733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	557	Open in IMG/M
3300026500\|Ga0247592_1111433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-4	658	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10215833	Not Available	889	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10342438	Not Available	647	Open in IMG/M
3300028008\|Ga0228674_1185017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus	676	Open in IMG/M
3300028008\|Ga0228674_1226856	Not Available	590	Open in IMG/M
3300028133\|Ga0228609_1166432	Not Available	533	Open in IMG/M
3300028196\|Ga0257114_1224147	Not Available	682	Open in IMG/M
3300028287\|Ga0257126_1006052	Not Available	7005	Open in IMG/M
3300028287\|Ga0257126_1106305	Not Available	999	Open in IMG/M
3300028287\|Ga0257126_1263138	Not Available	508	Open in IMG/M
3300031539\|Ga0307380_10121736	All Organisms → Viruses → Predicted Viral	2643	Open in IMG/M
3300032277\|Ga0316202_10042597	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300032277\|Ga0316202_10071762	All Organisms → Viruses → Predicted Viral	1607	Open in IMG/M
3300032277\|Ga0316202_10310401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-13	735	Open in IMG/M
3300034374\|Ga0348335_035986	All Organisms → Viruses → Predicted Viral	2096	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	2.36%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.85%
Algae	Host-Associated → Algae	2.36%
Terrestrial	Environmental → Terrestrial	0.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	94.49%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.36%
Green Algae	Host-Associated → Algae → Green Algae	2.36%
Soil	Environmental → Terrestrial → Soil	0.79%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	30.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.05%
Pelagic	Environmental → Aquatic → Marine → Pelagic	8.66%
Strait	Environmental → Aquatic → Marine → Strait	8.66%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.87%
Inlet	Environmental → Aquatic → Marine → Inlet	6.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.30%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.15%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.36%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	2.36%
Sediment	Environmental → Aquatic → Marine → Sediment	0.79%
Clay	Environmental → Terrestrial → Soil → Clay	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	28.35%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.02%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.45%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	8.66%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.66%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.87%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	6.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.30%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.15%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	2.36%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.36%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	2.36%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.57%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	18.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.45%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	8.66%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	8.66%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.66%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.09%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.09%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.51%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	3.15%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.15%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	2.36%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.36%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.36%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	2.36%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.57%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.57%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.57%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.79%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.79%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.79%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.79%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.79%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003427	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA	Environmental	Open in IMG/M
3300003617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021169	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024228	Seawater microbial communities from Monterey Bay, California, United States - 41D	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025668	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027996 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MG	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065666

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_101111462	3300000116	Marine	MTKEDFFEALWQMVKDTDVDYQELMDDDDEGGVYIRFTNIETEEMA*
OpTDRAFT_100311603	3300000928	Freshwater And Marine	MTREEFFDALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVVVEEEMA*
BBAY92_100225282	3300000947	Macroalgal Surface	MTREDFFDALWQMVKDTDVDYEELLDDDGEGGVYVKFTNVETEEME*
BBAY92_102037781	3300000947	Macroalgal Surface	MARANVPFKLGEKTMTKEDFFAALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIETEEMA
BBAY93_101546141	3300000973	Macroalgal Surface	VPFKLGEKTMTKEDFFAALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIETEEMA*
JGI20157J14317_101334812	3300001352	Pelagic Marine	MDLNMDRKDFFDALWHMVKDTDVDYQELLDDDGEGGVYIRFTNVVVGDDDD*
GOS2221_10099163	3300001938	Marine	MTREDFFAALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEELGA*
GOS2229_10425231	3300001963	Marine	MTREEFFNALWAMVKDSNVDFEELLDDDGEGGVFVKFT
JGI26081J50195_100087520	3300003346	Marine	MTREEFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA*
JGI26084J50262_10961693	3300003427	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEME*
JGI26082J51739_100672472	3300003617	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA*
JGI26273J51734_100688084	3300003620	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMT*
Ga0065861_10660774	3300004448	Marine	MTREEFFDALWQMLKFTDVDYQELMDDDGEGGVYIKFTNIEIEEMDDD*
Ga0066224_100933310	3300004457	Marine	MTREEFFDALWQMLKFTDVDYQELLDDDGEGGVYIKFTNIEIGRIRHD*
Ga0075462_100035937	3300006027	Aqueous	MTREDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIGTEEMDDA*
Ga0075466_10488631	3300006029	Aqueous	MTREDFFEALCQMVKFTDLDYQVMEDDGEGRLYIRFTN
Ga0075466_11967302	3300006029	Aqueous	MTREEFFDALWQMLKFTDVDYQELLDDDGEGGVYIKFTNIETE*
Ga0098048_11362732	3300006752	Marine	MTREAFFAALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA*
Ga0098054_13538982	3300006789	Marine	MTREEFFDALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA*
Ga0070754_101967562	3300006810	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETEEMDDD*
Ga0075477_104288502	3300006869	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMA*
Ga0070750_100203757	3300006916	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFSNIETEEMDDD*
Ga0070750_101818702	3300006916	Aqueous	MTKEDFFDALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIEIEELDNA*
Ga0098051_10489301	3300006924	Marine	QRRYKIMTKEEFFDALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA*
Ga0075463_100707984	3300007236	Aqueous	MTREDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIEIEELDNA*
Ga0070745_11837913	3300007344	Aqueous	HIDLNMDRKYFFDALWKMVENTDVDYQELLDDDGEGGVYIRFTNVVIGDDDD*
Ga0070745_12786943	3300007344	Aqueous	MTKEDFFDALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIETEEMDDD*
Ga0070752_13243552	3300007345	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIR
Ga0070753_11786602	3300007346	Aqueous	MTKEDFFDALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETEEMDDD*
Ga0099847_11822972	3300007540	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETE*
Ga0070751_13354051	3300007640	Aqueous	MTRDEFFDRLCEMVKDTNVEFRELLDDDGEGRVYVQFTNIKIEEEEEE
Ga0102963_10510475	3300009001	Pond Water	MTKEDFFDALWQMVKDTDVDYEELLDEDGEGGVYIKFTNIEIEEMEDD*
Ga0102963_11497804	3300009001	Pond Water	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMNDD*
Ga0115566_101558703	3300009071	Pelagic Marine	MDREDFFEALWQMVKDTDVDYQVMDDDGEGGLFVRFTNIDEEETA*
Ga0102814_101284481	3300009079	Estuarine	VMTREEFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEME*
Ga0102812_106957182	3300009086	Estuarine	MTREKFFDALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVVVEEEMA*
Ga0115562_10424385	3300009434	Pelagic Marine	MTRTEFFDALWEVVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA*
Ga0115562_11324383	3300009434	Pelagic Marine	MDRKDFFDALWHMVKDTDVDYQELLDDDGEGGVYIRFTNVVVGDDDD*
Ga0115008_110690803	3300009436	Marine	MTHEEFFNKLWEMVKDSSVDFQELRWVGDEEDVFVRFTNIQEEEDA*
Ga0115559_11183963	3300009438	Pelagic Marine	MTRTEFFDALWEMVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA*
Ga0115570_102329932	3300009496	Pelagic Marine	MTKEDFFDALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMA*
Ga0098056_12371712	3300010150	Marine	MTREAFFAALWQMVKDTDVDYQELLDDDGEGGVYIKFINVIVEEEMA*
Ga0129327_102341253	3300013010	Freshwater To Marine Saline Gradient	MTREDFFEALGQMVKFTNVDYQVMEDDGEGRLYIRFTNIEEEEMDDD*
Ga0181390_10112559	3300017719	Seawater	MDREVFFDALWKMVENTDVDYQELLDDDGEGGVYIKFTNVVVGDDDD
Ga0181390_10792352	3300017719	Seawater	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYIKFTNVEAEEEVE
Ga0181431_11239102	3300017735	Seawater	MTREDFFDALWQMLKFTDVDYEELLDDDGEGGVYIKFTNVIAEEEV
Ga0181399_10181037	3300017742	Seawater	MTREDFFNALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVIVEEEMA
Ga0181392_11238893	3300017749	Seawater	MTREEFFDALWQMLKFTDVDYQELLDDDGEGGVYIKFTNVVVEEEMA
Ga0187219_100048526	3300017751	Seawater	MDLNMDREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFT
Ga0181382_10835632	3300017756	Seawater	MDREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVVVGDDDD
Ga0181394_11025022	3300017776	Seawater	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYIKFTNVEVEEEVELCIN
Ga0181424_100422737	3300017786	Seawater	MTREEFFDALWQMLKFTDVDYEELLDDDGEGGVYIKFTNVIAEEEMA
Ga0181424_104680682	3300017786	Seawater	MTREEFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVEVEDTLMTAYK
Ga0181565_102495831	3300017818	Salt Marsh	MMTRDEFFDRLWEMVKDTNVDFKELLDDDGEGGVYVQFTNIKIEEE
Ga0181565_105739352	3300017818	Salt Marsh	MNRQEFFDNLWEMVKGSNVDFEELLDDDGEGGVYVKFTNITVEEQEDA
Ga0181565_107624732	3300017818	Salt Marsh	MMTREEFFNRLLDMVKDTDVEFNELLDDDGEGGVYVQFTNIQIEEE
Ga0181607_100784864	3300017950	Salt Marsh	MTKEDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIETEELGL
Ga0181577_103609283	3300017951	Salt Marsh	MTREEFFNRLLDMVKDTDVEFNELLDDDGEGGVYVQFTNIQIEEE
Ga0181577_106786991	3300017951	Salt Marsh	MTREEFFNRLWDMVKDTDVEFNELLDDDGEGGVYVQFTNIEVEEESAA
Ga0181583_108458572	3300017952	Salt Marsh	MMTRDEFFDRLWEMVKDTNVDFKELLDDDGEGGVYVQFTNIEIEEE
Ga0181590_103636332	3300017967	Salt Marsh	MTREEFFNRLWEMVKDTNVDFKELLDDDGEGGVYVQFTNIEVEEESAA
Ga0181591_102006311	3300018424	Salt Marsh	MMTRDEFFDRLWVMVKDTNVDFKELLDDDGEGGVYVQFTNIKIEEE
Ga0181566_105636063	3300018426	Salt Marsh	MMTREEFFNRLLDMVKDTDVEFNELLDDDGEGGVYVQFTNI
Ga0181594_100990974	3300020054	Salt Marsh	MMTRDEFFDRLWEMVKDTNVDFKELLDDDGEGGVYVQFTNIQIEEE
Ga0211678_100380385	3300020388	Marine	MTREEFFNRLWEMVKDTDVDFAELLDDDGEGGVYV
Ga0206677_102988621	3300021085	Seawater	MTREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEE
Ga0206687_12612313	3300021169	Seawater	GDGVMTREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA
Ga0206682_1000209712	3300021185	Seawater	MTREDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA
Ga0206682_101383874	3300021185	Seawater	MTREEFFDALWQMLKFTDVDYEELLDDDGEGGVYIKFTNVIVEEEMA
Ga0213862_100070157	3300021347	Seawater	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETEEMA
Ga0213863_102856504	3300021371	Seawater	PTSRGDGIMTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETE
Ga0213869_100055718	3300021375	Seawater	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFTNIETE
Ga0213869_101581491	3300021375	Seawater	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTN
Ga0222717_100240678	3300021957	Estuarine Water	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYIKFTNVEAEEEMA
Ga0222717_106107542	3300021957	Estuarine Water	MTREELFDALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVIVEEEMA
Ga0222718_100959344	3300021958	Estuarine Water	MTREDFFAALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMA
Ga0222718_101215803	3300021958	Estuarine Water	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMDDD
Ga0222718_105146413	3300021958	Estuarine Water	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVVVEEEMA
Ga0222719_100244579	3300021964	Estuarine Water	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETE
Ga0222719_102961351	3300021964	Estuarine Water	KEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMDDD
Ga0212024_10320312	3300022065	Aqueous	MTREDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIGTEEMDDA
Ga0196887_10477244	3300022178	Aqueous	MTREDFFDALWQMIKDTDVDYEELLDDDGEGGVYIKFTNIETEEMNND
Ga0224502_104063312	3300022218	Sediment	MTREEFFDALWQMLKFTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA
Ga0255781_102540272	3300022934	Salt Marsh	MNRQEFFDNLWEMVKDSNVDFEELLDDDGEGGVYVKFTNITVEEDA
(restricted) Ga0233432_102249713	3300023109	Seawater	MDREEFFDALSQMLKFTDVDYQELLDDDGEGGVYIKFTNVVVGDDDD
(restricted) Ga0233412_102819012	3300023210	Seawater	MTREEFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA
(restricted) Ga0255040_103771293	3300024059	Seawater	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA
Ga0228633_10271351	3300024228	Seawater	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYIKFTNVEAEEE
Ga0208791_100216321	3300025083	Marine	MTKEEFFDALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA
Ga0208791_10473181	3300025083	Marine	MTREAFFAALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVI
Ga0208298_11030801	3300025084	Marine	MTREAFFAALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMA
Ga0208434_11120951	3300025098	Marine	MTREAFFAALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEI
Ga0209557_10580572	3300025483	Marine	MTREDFFDALWQMVKDTDVEYQELLDDDGEGGVYIKFTNIVVEEELLQ
Ga0208303_10727754	3300025543	Aqueous	MTKEDFFDALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIEIEELDNA
Ga0209405_11063142	3300025620	Pelagic Marine	MDLNMDRKDFFDALWHMVKDTDVDYQELLDDDGEGGVYIRFTNVVVGDDDD
Ga0209405_11487942	3300025620	Pelagic Marine	MTRTEFFDALWEVVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA
Ga0209716_10552136	3300025626	Pelagic Marine	MTKEDFFDALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMA
Ga0209197_10690403	3300025637	Pelagic Marine	LWEMVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA
Ga0209198_10734073	3300025640	Pelagic Marine	MTRTEFFDALWEMVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA
Ga0208134_10658853	3300025652	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIRFTNIETEEMA
Ga0208134_10667365	3300025652	Aqueous	RIGDSVMTREDFFDALWQMIKDTDVDYEELLDDDGEGGVYIKFTNIETEEMNND
Ga0209251_10525071	3300025668	Marine	MDRKDFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVVVGDDDD
Ga0209652_100564611	3300025684	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA
Ga0208899_10643062	3300025759	Aqueous	MTKEDFFEALWQMVKDTDVDYQELMDDDGEGGVYIKFSNIETEEMDDD
Ga0208425_10044508	3300025803	Aqueous	MTKEDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIGTEEMDDA
Ga0209199_12410041	3300025809	Pelagic Marine	GGSSMTRTEFFDALWEMVKDSNVDFEELLDDDGEGGVFVRFSNIQVEEEAA
Ga0208543_10799281	3300025810	Aqueous	TSALCRIGDGVMTREDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNIEIEELDNA
Ga0208543_10959841	3300025810	Aqueous	MTREDFFDALWQMIKDTDVDYEELMDDDGEGGVYIKFTNI
Ga0209666_10682446	3300025870	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVIVEEEMT
Ga0209555_100966074	3300025879	Marine	MDREVFFDALWKMVENTDVDYEELLDDDGEGGVYIRFTNVVVGDDDD
Ga0209632_103449043	3300025886	Pelagic Marine	MTREEFFNALWEMVKDSNVDFKELLDDDGEGGVFVRFTNIQEDEEA
Ga0209929_11547332	3300026187	Pond Water	MTKEDFFDALWQMVKDTDVDYEELLDEDGEGGVYIKFTNIEIEEMEDD
Ga0247592_11114333	3300026500	Seawater	MTREDFFDALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVIVEEEMA
(restricted) Ga0233415_102158331	3300027861	Seawater	MTREEFFDALWQMVKFTDVDYEELLDDDGEGGVYIKFTNVIVEEEMA
(restricted) Ga0233413_103424381	3300027996	Seawater	MTREEFFDALWQMLKFTDVDYEELLDGEGGVYIKFTNVIVEE
Ga0228674_11850171	3300028008	Seawater	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYIKFTN
Ga0228674_12268561	3300028008	Seawater	MTREKFFDALVWVFVDTDIEYEELLDDDGEGGVYM
Ga0228609_11664322	3300028133	Seawater	MTREEFFDALWQMVKDTDVDYQELLDDDGEGGVYIRFTNVIVEEEMA
Ga0257114_12241471	3300028196	Marine	MTREEFFDALWQMLKFTDVDYEELLDDDGEGGVYIKFTNVVVEEEMA
Ga0257126_100605215	3300028287	Marine	MTREKFFDALWQMIVDTDVEYEELLDDDGEGGVYIKFTNVVVEEEMA
Ga0257126_11063051	3300028287	Marine	MTREEFFDALWQMVKDTDVDYQELLDDDGEGGVYIKFTNVEVEDTLITAYQ
Ga0257126_12631382	3300028287	Marine	MTREDFFNALWQMVKDTDVDYQELLDDDGEGGVYLKFTNVVEEEETNG
Ga0307380_101217362	3300031539	Soil	MTKEDFFEALWQMVKDTDVDYQELMDTDDEGGVYIRFTNLETEE
Ga0316202_100425974	3300032277	Microbial Mat	MTKEDFFDALWQMVKDTDVDYEELLDDDGEGGVYIKFTNIEIEEIIQ
Ga0316202_100717624	3300032277	Microbial Mat	MTKEDFFDALWQMVKDTDVDYEELMDDDGEGGVYIKFTNIETEEMA
Ga0316202_103104013	3300032277	Microbial Mat	MTREDFFEALWQMIKDTDVDYQELMDDDGEGGVYIKFTNIETEELET
Ga0348335_035986_356_499	3300034374	Aqueous	MDRKDFFDALWKMVENTDVDYQELLDDDGEGGVYIRFTNVVIGDDDD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign