Metagenome Family F065656

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065656
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	86 residues
Representative Sequence	MIDEGASSADDGPLRDAELRELVVRARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGGLHR
Number of Associated Samples	96
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.83 %
% of genes near scaffold ends (potentially truncated)	33.86 %
% of genes from short scaffolds (< 2000 bps)	81.89 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.740 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere (13.386 % of family members)
Environment Ontology (ENVO)	Unclassified (64.567 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (85.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.82% β-sheet: 0.00% Coil/Unstructured: 48.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF02310	B12-binding	20.47
PF13411	MerR_1	12.60
PF02518	HATPase_c	7.09
PF13487	HD_5	5.51
PF00072	Response_reg	5.51
PF01966	HD	5.51
PF13414	TPR_11	0.79
PF00294	PfkB	0.79
PF01594	AI-2E_transport	0.79
PF14361	RsbRD_N	0.79
PF02607	B12-binding_2	0.79
PF13426	PAS_9	0.79
PF06925	MGDG_synth	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.79
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.74 %
Unclassified	root	N/A	21.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.74 %
Unclassified	root	N/A	21.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.74 %
Unclassified	root	N/A	21.26 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	70.08 %
Unclassified	root	N/A	21.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	65.35 %
Unclassified	root	N/A	21.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	50.39 %
Unclassified	root	N/A	21.26 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.09 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	50.39 %
Unclassified	root	N/A	21.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.09 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	50.39 %
Unclassified	root	N/A	21.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.09 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	50.39 %
Unclassified	root	N/A	21.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.09 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	50.39 %
Unclassified	root	N/A	21.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.09 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105603457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2333	Open in IMG/M
3300004153\|Ga0063455_100109781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1161	Open in IMG/M
3300004463\|Ga0063356_100256690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2124	Open in IMG/M
3300005327\|Ga0070658_10196992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1699	Open in IMG/M
3300005327\|Ga0070658_10996590	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005327\|Ga0070658_11997145	Not Available	500	Open in IMG/M
3300005328\|Ga0070676_10040922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2685	Open in IMG/M
3300005328\|Ga0070676_10055896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2330	Open in IMG/M
3300005329\|Ga0070683_100070942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3250	Open in IMG/M
3300005329\|Ga0070683_101077128	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005331\|Ga0070670_100258781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1517	Open in IMG/M
3300005331\|Ga0070670_101808354	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005333\|Ga0070677_10097959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1288	Open in IMG/M
3300005333\|Ga0070677_10114368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1209	Open in IMG/M
3300005335\|Ga0070666_11193637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	567	Open in IMG/M
3300005337\|Ga0070682_100206341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1390	Open in IMG/M
3300005337\|Ga0070682_100613623	Not Available	861	Open in IMG/M
3300005338\|Ga0068868_100746731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	879	Open in IMG/M
3300005339\|Ga0070660_101289824	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005339\|Ga0070660_101322415	Not Available	612	Open in IMG/M
3300005343\|Ga0070687_100358920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	943	Open in IMG/M
3300005344\|Ga0070661_100268997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1319	Open in IMG/M
3300005344\|Ga0070661_100285845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1280	Open in IMG/M
3300005354\|Ga0070675_100391968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1238	Open in IMG/M
3300005354\|Ga0070675_101980866	Not Available	537	Open in IMG/M
3300005354\|Ga0070675_102132430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	517	Open in IMG/M
3300005355\|Ga0070671_100329767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1301	Open in IMG/M
3300005355\|Ga0070671_100576092	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300005356\|Ga0070674_100634350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	906	Open in IMG/M
3300005364\|Ga0070673_100765986	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005367\|Ga0070667_100702373	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005437\|Ga0070710_10446360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	876	Open in IMG/M
3300005439\|Ga0070711_101759363	Not Available	543	Open in IMG/M
3300005441\|Ga0070700_100984872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	692	Open in IMG/M
3300005455\|Ga0070663_101604447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	580	Open in IMG/M
3300005456\|Ga0070678_100447692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1131	Open in IMG/M
3300005456\|Ga0070678_102026409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	545	Open in IMG/M
3300005466\|Ga0070685_10039718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2675	Open in IMG/M
3300005530\|Ga0070679_102082666	Not Available	517	Open in IMG/M
3300005535\|Ga0070684_100477635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1153	Open in IMG/M
3300005535\|Ga0070684_100599900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1024	Open in IMG/M
3300005543\|Ga0070672_101781067	Not Available	554	Open in IMG/M
3300005544\|Ga0070686_100407152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1036	Open in IMG/M
3300005564\|Ga0070664_100031434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4436	Open in IMG/M
3300005577\|Ga0068857_100845620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	875	Open in IMG/M
3300005615\|Ga0070702_100979320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300005615\|Ga0070702_101879170	Not Available	502	Open in IMG/M
3300005616\|Ga0068852_102010757	Not Available	600	Open in IMG/M
3300005617\|Ga0068859_101028289	Not Available	905	Open in IMG/M
3300005618\|Ga0068864_101964409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	591	Open in IMG/M
3300006755\|Ga0079222_10374599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	976	Open in IMG/M
3300006876\|Ga0079217_10006650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3510	Open in IMG/M
3300006880\|Ga0075429_101854810	Not Available	523	Open in IMG/M
3300006881\|Ga0068865_100837667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	796	Open in IMG/M
3300009094\|Ga0111539_12110866	Not Available	654	Open in IMG/M
3300009176\|Ga0105242_12264339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	589	Open in IMG/M
3300009177\|Ga0105248_11983558	All Organisms → cellular organisms → Bacteria → FCB group	661	Open in IMG/M
3300010036\|Ga0126305_10682938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	694	Open in IMG/M
3300010397\|Ga0134124_11487422	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	705	Open in IMG/M
3300010403\|Ga0134123_11972238	Not Available	641	Open in IMG/M
3300012905\|Ga0157296_10242584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	600	Open in IMG/M
3300012988\|Ga0164306_10882938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	727	Open in IMG/M
3300013102\|Ga0157371_10689424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	764	Open in IMG/M
3300013105\|Ga0157369_10971557	Not Available	870	Open in IMG/M
3300013306\|Ga0163162_10432881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1447	Open in IMG/M
3300013308\|Ga0157375_10079439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3316	Open in IMG/M
3300014745\|Ga0157377_10576805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	799	Open in IMG/M
3300014969\|Ga0157376_10183391	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1915	Open in IMG/M
3300015374\|Ga0132255_103804072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	641	Open in IMG/M
3300015374\|Ga0132255_103986301	Not Available	627	Open in IMG/M
3300018476\|Ga0190274_10075082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2572	Open in IMG/M
3300021445\|Ga0182009_10019122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2560	Open in IMG/M
3300022756\|Ga0222622_10045613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2444	Open in IMG/M
3300022756\|Ga0222622_10143291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1532	Open in IMG/M
3300022756\|Ga0222622_10555537	Not Available	825	Open in IMG/M
3300025321\|Ga0207656_10064942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1610	Open in IMG/M
3300025893\|Ga0207682_10039959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1909	Open in IMG/M
3300025898\|Ga0207692_10431898	Not Available	826	Open in IMG/M
3300025899\|Ga0207642_11149388	Not Available	503	Open in IMG/M
3300025901\|Ga0207688_10114020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300025907\|Ga0207645_10015618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5039	Open in IMG/M
3300025907\|Ga0207645_10045511	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300025908\|Ga0207643_10046681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2449	Open in IMG/M
3300025909\|Ga0207705_10463413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	983	Open in IMG/M
3300025909\|Ga0207705_10501590	Not Available	943	Open in IMG/M
3300025909\|Ga0207705_11551211	Not Available	500	Open in IMG/M
3300025916\|Ga0207663_10799919	All Organisms → cellular organisms → Bacteria → FCB group	751	Open in IMG/M
3300025920\|Ga0207649_10452889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	969	Open in IMG/M
3300025921\|Ga0207652_11134535	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	683	Open in IMG/M
3300025923\|Ga0207681_10331628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1213	Open in IMG/M
3300025925\|Ga0207650_11461698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	581	Open in IMG/M
3300025926\|Ga0207659_10132583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1925	Open in IMG/M
3300025926\|Ga0207659_10351734	All Organisms → cellular organisms → Bacteria → FCB group	1223	Open in IMG/M
3300025926\|Ga0207659_11521544	Not Available	572	Open in IMG/M
3300025930\|Ga0207701_10245162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300025931\|Ga0207644_10150590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1800	Open in IMG/M
3300025931\|Ga0207644_11638514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300025933\|Ga0207706_10859038	Not Available	768	Open in IMG/M
3300025937\|Ga0207669_10393620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1083	Open in IMG/M
3300025938\|Ga0207704_11548080	Not Available	569	Open in IMG/M
3300025940\|Ga0207691_10080655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2926	Open in IMG/M
3300025944\|Ga0207661_10064919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2961	Open in IMG/M
3300025945\|Ga0207679_10290484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1405	Open in IMG/M
3300025960\|Ga0207651_10046141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2928	Open in IMG/M
3300025960\|Ga0207651_10309166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1317	Open in IMG/M
3300025960\|Ga0207651_10766063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300025960\|Ga0207651_12135608	Not Available	503	Open in IMG/M
3300025986\|Ga0207658_10086948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2413	Open in IMG/M
3300026023\|Ga0207677_10072961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2429	Open in IMG/M
3300026023\|Ga0207677_10091855	All Organisms → cellular organisms → Bacteria → FCB group	2209	Open in IMG/M
3300026035\|Ga0207703_10613057	Not Available	1030	Open in IMG/M
3300026035\|Ga0207703_10656915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	995	Open in IMG/M
3300026067\|Ga0207678_10027841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4935	Open in IMG/M
3300026075\|Ga0207708_11285682	Not Available	641	Open in IMG/M
3300026095\|Ga0207676_11144472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	770	Open in IMG/M
3300026116\|Ga0207674_10056769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3973	Open in IMG/M
3300026121\|Ga0207683_10485532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1140	Open in IMG/M
3300026121\|Ga0207683_10621240	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300026142\|Ga0207698_11299207	Not Available	742	Open in IMG/M
3300026142\|Ga0207698_11503633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	689	Open in IMG/M
3300027886\|Ga0209486_10115283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1443	Open in IMG/M
3300031716\|Ga0310813_10223461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1555	Open in IMG/M
3300031903\|Ga0307407_11029986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	637	Open in IMG/M
3300031939\|Ga0308174_11092407	All Organisms → cellular organisms → Bacteria → FCB group	678	Open in IMG/M
3300031996\|Ga0308176_12959807	All Organisms → cellular organisms → Bacteria → FCB group	503	Open in IMG/M
3300032074\|Ga0308173_10188296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1703	Open in IMG/M
3300032075\|Ga0310890_10394255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1026	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	67.72%
Environmental	Environmental	32.28%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	67.72%
Terrestrial	Environmental → Terrestrial	29.92%
Aquatic	Environmental → Aquatic	2.36%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	46.46%
Soil	Environmental → Terrestrial → Soil	29.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.26%
Sediment	Environmental → Aquatic → Sediment	2.36%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	38.58%
Loam	Environmental → Terrestrial → Soil → Loam	16.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.87%
Soil	Host-Associated → Plants → Rhizoplane → Soil	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	38.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%

Habitat	Taxonomy	Distribution
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	13.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	12.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	12.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056034572	3300000364	Soil	MTDEAAFSTDGGPFSDAELRELLVRARAHDDHRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSSGQFR*
Ga0063455_1001097811	3300004153	Soil	MIDEGASDVDDGPLRDTELRELLVHARAHDDRRLVQLITSSVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGTRSW*
Ga0063356_1002566902	3300004463	Arabidopsis Thaliana Rhizosphere	VNPPAVTIGVGDSVPIGDAELRELLARAREHDDPQLARLITSYVTLRRVTADVIASIEAREGGAAVARTPLLLRARELSGGLHR*
Ga0070658_101969921	3300005327	Corn Rhizosphere	MTDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPT
Ga0070658_109965902	3300005327	Corn Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070658_119971452	3300005327	Corn Rhizosphere	VSPPTIVDASASGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0070676_100409222	3300005328	Miscanthus Rhizosphere	VIPPTVIDGGASDDDAPLSDVELRELLTRAREHDDRRLVRLITGYVTLRRVMADVIASIEAREGGAAVARAPLLLRARELSRAQGR*
Ga0070676_100558962	3300005328	Miscanthus Rhizosphere	MNDDGAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR*
Ga0070683_1000709424	3300005329	Corn Rhizosphere	MIDEEASGADDGPLGDVELRELLVQARAQDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGGLRHGRSVTSHPPSPS*
Ga0070683_1010771281	3300005329	Corn Rhizosphere	SGADDSPLRDVELRALLVRARAQDDQGLVRLILSYVTLRRVMADVIALIEARDGGAAVARTPLLLRARELSGDLVR*
Ga0070670_1002587811	3300005331	Switchgrass Rhizosphere	MIDEGASGADDGPLGDAELRELLVRARANDDPRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLHHGRSVTPHPPSPS*
Ga0070670_1018083541	3300005331	Switchgrass Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRA
Ga0070677_100979592	3300005333	Miscanthus Rhizosphere	VTPSATIDEGASEGDAPLRDAELRELLVRARAHDDHRLVHLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSGSLDRKRSALSHTTSQS*
Ga0070677_101143682	3300005333	Miscanthus Rhizosphere	MIDEGASDVDTGPLRDTELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGMLAR*
Ga0070666_111936371	3300005335	Switchgrass Rhizosphere	PVTSSANIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070682_1002063412	3300005337	Corn Rhizosphere	VNPPTIGDEGASGADDSPLRDVELRALLVRARAQNDQGLVRLILSYVTLRRVMADVIALIEARDGGAAVARTPLLLRARELSGDLVR*
Ga0070682_1006136232	3300005337	Corn Rhizosphere	VSPPTIVDAGAFGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0068868_1007467311	3300005338	Miscanthus Rhizosphere	VTSSAKIGEGPSSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070660_1012898242	3300005339	Corn Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR*
Ga0070660_1013224152	3300005339	Corn Rhizosphere	VNPPTIGDEGASGADDSPLRDVELRALLVRARAQDDQGLVRLILSYVTLRRVMADVIALIEARDGGAAVARTPLLLRARELSGDLVR*
Ga0070687_1003589202	3300005343	Switchgrass Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSDTRAR*
Ga0070661_1002689972	3300005344	Corn Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0070661_1002858452	3300005344	Corn Rhizosphere	VIPAMIDEGASGADDGPLGDAELRELLVRARANDDPRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLHHGRSVTPHPPSPS*
Ga0070675_1003919682	3300005354	Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPDRKHSTLSHTPDES*
Ga0070675_1019808662	3300005354	Miscanthus Rhizosphere	VIPPTVIDGGASDDDALLSDVELRELLTRAREHDDRRLVRLITGYVTLRRVMADVIASIEAREGGAAVARAPLLLRARELSRAQGR*
Ga0070675_1021324301	3300005354	Miscanthus Rhizosphere	VTTSATIDEGASEGDAPLRDAELRELLVRARAHDDHRLVHLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSGSLDRKRSALSHTTSQS*
Ga0070671_1003297671	3300005355	Switchgrass Rhizosphere	VTSSANIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070671_1005760922	3300005355	Switchgrass Rhizosphere	MNDDGAVSSEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR*
Ga0070674_1006343501	3300005356	Miscanthus Rhizosphere	APREPAARIEPPMTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPDRKHSTLSHTPDES*
Ga0070673_1007659862	3300005364	Switchgrass Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR*
Ga0070667_1007023732	3300005367	Switchgrass Rhizosphere	VTSSANIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR*
Ga0070710_104463601	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEAAVGTNGGPFPDAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVAR
Ga0070711_1017593631	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEAAVGTNGGPFPDAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSSA*
Ga0070700_1009848722	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSLDRKHSTLSHTPDES*
Ga0070663_1016044472	3300005455	Corn Rhizosphere	VTTSATIDEGASEGDAPLRDAELRELLVRARAHDDHRLVHLITSYVTLRRVMADVVASIEAREGGAAVARTPLL
Ga0070678_1004476922	3300005456	Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSGSLDRKRSALSHTTSQS*
Ga0070678_1020264092	3300005456	Miscanthus Rhizosphere	IDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS*
Ga0070685_100397181	3300005466	Switchgrass Rhizosphere	REPAARVEPPPVTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070679_1020826662	3300005530	Corn Rhizosphere	VNPPTIGDEGASGADDSPLRDVELRALLVRARAQDDQGLVRLILSYVTLRRVMADVIALIEARDGGAAVARTPLLLRA
Ga0070684_1004776353	3300005535	Corn Rhizosphere	TSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0070684_1005999002	3300005535	Corn Rhizosphere	VIPAMIDEEASGADDGPLGDVELRELLVQARAQDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGGLRHGRSVTSHPPSPS*
Ga0070672_1017810671	3300005543	Miscanthus Rhizosphere	VTSSAKIGEGPSSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR*
Ga0070686_1004071522	3300005544	Switchgrass Rhizosphere	VIPPTVIDGGASDDDAPLSDVELRELLTRAREHDDRRLVRLITGYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070664_1000314342	3300005564	Corn Rhizosphere	MIDEGASGADDGPLGDVELRELLVQARAQDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLHHGRSVTPHPPSPS*
Ga0068857_1008456201	3300005577	Corn Rhizosphere	VTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDRRVALLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGARAR*
Ga0070702_1009793202	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0070702_1018791702	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GTSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0068852_1020107571	3300005616	Corn Rhizosphere	MNDDEAVSAEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR*
Ga0068859_1010282892	3300005617	Switchgrass Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELQALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0068864_1019644092	3300005618	Switchgrass Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSG
Ga0079222_103745991	3300006755	Agricultural Soil	MTDEAAVGTDGGPFPDAELRELLARARADGDPRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLL
Ga0079217_100066502	3300006876	Agricultural Soil	MIDQGTARAGDGPLTDIELRELLAQARAQDDQRLVRLVTSYLMLRRVTADVVAGIEAREGGASVARNPLLLRARQLSSRSSPSEAP*
Ga0075429_1018548101	3300006880	Populus Rhizosphere	VSPSAKIGEGGPSADDAPLRDAELRELLVRARAQDDHRIAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0068865_1008376672	3300006881	Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAYDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVART
Ga0111539_121108662	3300009094	Populus Rhizosphere	VSPSAKIGEGGPSADDGPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0105242_122643391	3300009176	Miscanthus Rhizosphere	MIDEGASDVDTGPLRDAELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSG
Ga0105248_119835582	3300009177	Switchgrass Rhizosphere	MNDDGAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR*
Ga0126305_106829382	3300010036	Serpentine Soil	SPSEMIDEGASDADDAPLGDAELRELLVRARAHNDRRVVQLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSGSLDRKRTALSQTTSQS*
Ga0134124_114874222	3300010397	Terrestrial Soil	MTDDRAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEARDGGAAVA
Ga0134123_119722382	3300010403	Terrestrial Soil	MIDEGASDVDNGPLRDTELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGMLAR*
Ga0157296_102425841	3300012905	Soil	DTPLRDAELRELLLRARAQDDRRLARLITSYITLRRVMADVIASIEAREGGAAVVRTPLLRRARELSGGLFR*
Ga0164306_108829382	3300012988	Soil	ARREPAAGRRTMNDDGAVSSEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR*
Ga0157371_106894242	3300013102	Corn Rhizosphere	MIDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0157369_109715572	3300013105	Corn Rhizosphere	RRAPAVSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQGVVRLILSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0163162_104328812	3300013306	Switchgrass Rhizosphere	MIDEGASDVDSGPLRDTELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR*
Ga0157375_100794392	3300013308	Miscanthus Rhizosphere	MNDDGAVSAEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR*
Ga0157377_105768052	3300014745	Miscanthus Rhizosphere	MIDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS*
Ga0157376_101833913	3300014969	Miscanthus Rhizosphere	VSPPTIVDTASSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR*
Ga0132255_1038040721	3300015374	Arabidopsis Rhizosphere	MIDEGASDVDTGPLRDAELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTP
Ga0132255_1039863012	3300015374	Arabidopsis Rhizosphere	MTDEAAVGTDGGPFPDAELRELLARARADGDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSSAQSR*
Ga0190274_100750823	3300018476	Soil	VTSSTISDEGASDADDAPLRDDELRELLVRARANDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGSPDRKHSGFSHTPSGS
Ga0182009_100191223	3300021445	Soil	VSPPTIVDAGASAADDSPLRDAELKALLARARAQDDPGLVRLIISYVTLRRVMADVIALIEAREGGAAVARTPLLLRARELSGDLVR
Ga0222622_100456132	3300022756	Groundwater Sediment	MIDEGASDVDDGPLRDTELRELLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGELFR
Ga0222622_101432912	3300022756	Groundwater Sediment	MIDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGGLRHGRSVTSHPPSPS
Ga0222622_105555372	3300022756	Groundwater Sediment	GGSSADEGPLRDTELRELLVRARAQDDHRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGGQVR
Ga0207656_100649422	3300025321	Corn Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELQALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207682_100399592	3300025893	Miscanthus Rhizosphere	VTTSATIDEGASEGDAPLRDAELRELLVRARAHDDHRLVHLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSGSLDRKRSALSHTTSQS
Ga0207692_104318981	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEAAVGTNGGPFPDAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARN
Ga0207642_111493881	3300025899	Miscanthus Rhizosphere	GPLRDTELRALLVHARAHDDRRLVQLITSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207688_101140201	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTVGTRSAVSPPTIVDTASSGADDSPLRDAELQALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207645_100156182	3300025907	Miscanthus Rhizosphere	MNDDGAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR
Ga0207645_100455113	3300025907	Miscanthus Rhizosphere	VIPPTVIDGGASDDDAPLSDVELRELLTRAREHDDRRLVRLITGYVTLRRVMADVIASIEAREGGAAVARAPLLLRARELSRAQGR
Ga0207643_100466812	3300025908	Miscanthus Rhizosphere	VTPSATIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR
Ga0207705_104634131	3300025909	Corn Rhizosphere	VIPPMTDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS
Ga0207705_105015902	3300025909	Corn Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR
Ga0207705_115512112	3300025909	Corn Rhizosphere	VSPPTIVDASASGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207663_107999192	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEAAVGTNGGPFPDAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSSA
Ga0207649_104528892	3300025920	Corn Rhizosphere	VTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR
Ga0207652_111345352	3300025921	Corn Rhizosphere	VNPPTIGDEGASGADDSPLRDVELRALLVRARAQDDQGLVRLILSYVTLRRVMADVIALIEARDGGAAVARTPLLLRARELSGDLVR
Ga0207681_103316281	3300025923	Switchgrass Rhizosphere	VIPPTVIDGGASDDDAPLSDVELRELLTRAREHDDRRLVRLITGYVTLRRVMADVIASIEAREGGAAVARA
Ga0207650_114616981	3300025925	Switchgrass Rhizosphere	EGASSADDAPLRDAELRELLVRARAQDDRRVALLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGARAR
Ga0207659_101325832	3300025926	Miscanthus Rhizosphere	VTSSAKIGEGPSSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTRAR
Ga0207659_103517342	3300025926	Miscanthus Rhizosphere	MTDDRAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR
Ga0207659_115215441	3300025926	Miscanthus Rhizosphere	VIPPIIDEGASSADDAPLGDAELRELLERARANDDRPLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS
Ga0207701_102451623	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPSSKRSSLSHTPSES
Ga0207644_101505901	3300025931	Switchgrass Rhizosphere	VTSSANIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR
Ga0207644_116385141	3300025931	Switchgrass Rhizosphere	GAVSSEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR
Ga0207706_108590382	3300025933	Corn Rhizosphere	VTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGMLAR
Ga0207669_103936202	3300025937	Miscanthus Rhizosphere	GDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPDRKHSTLSHTPDES
Ga0207704_115480801	3300025938	Miscanthus Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSLDRKHSTLS
Ga0207691_100806554	3300025940	Miscanthus Rhizosphere	VTPSAKIDEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR
Ga0207661_100649191	3300025944	Corn Rhizosphere	DGPLGDVELRELLVQARAQDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGGLRHGRSVTSHPPSPS
Ga0207679_102904842	3300025945	Corn Rhizosphere	VIPAMIDEEASGADDGPLGDVELRELLVQARAQDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLHHGRSVTPHPPSPS
Ga0207651_100461413	3300025960	Switchgrass Rhizosphere	MIDEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS
Ga0207651_103091662	3300025960	Switchgrass Rhizosphere	VTSSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPL
Ga0207651_107660632	3300025960	Switchgrass Rhizosphere	MNDDGAVSAEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR
Ga0207651_121356081	3300025960	Switchgrass Rhizosphere	MTSSAAMGEGASDGDDAPLRDAELRELLGRARAHDDRRVVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPDRKHSTLSHTPDES
Ga0207658_100869481	3300025986	Switchgrass Rhizosphere	APREPAARVEPPPVTSSAKIGEGPSSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR
Ga0207677_100729612	3300026023	Miscanthus Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQELVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207677_100918553	3300026023	Miscanthus Rhizosphere	VTSSAKIGEGPSSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR
Ga0207703_106130571	3300026035	Switchgrass Rhizosphere	VTPSAKIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARQLSGTSAR
Ga0207703_106569151	3300026035	Switchgrass Rhizosphere	MTDDRAVSTEGGSFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELSSAPSR
Ga0207678_100278415	3300026067	Corn Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGTLLR
Ga0207708_112856822	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VTTSATIDEGASEGDAPLRDAELRELLVRARAHDDHRLVHLITSYVTLRRVMADVIASIEAREGGAAVARTPLLPRARELSGSLDRKHSTLSHTPDES
Ga0207676_111444721	3300026095	Switchgrass Rhizosphere	VSPPTIVDQGTSGADDSPLRDAELKALLARARAQDDQGVVRLIVSYVTLRRVMADVIASIEARDGGAAVARTPLLLRARELSGNLFR
Ga0207674_100567692	3300026116	Corn Rhizosphere	VTPSATIGEGASSADDAPLRDAELRELLVRARAQDDRRVALLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSDTRAR
Ga0207683_104855321	3300026121	Miscanthus Rhizosphere	VIPPMIAEGASSADDAPLGDAELRELLERARANDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSL
Ga0207683_106212402	3300026121	Miscanthus Rhizosphere	IDEGASEGDAPLRDAELRELLVRARAHDDHRLVQLITSYVTLRRVMADVIASIEARDGGAAVARSPLLLRARELSSAPSR
Ga0207698_112992072	3300026142	Corn Rhizosphere	VTSSANIGEGASSADDAPLRDAELRELLVRARAQDDHRVAQLITSYVTLRRVMADVIASIEAREGGAAVAKTPLLLRARELSGTSA
Ga0207698_115036331	3300026142	Corn Rhizosphere	PPMIDEGESGADDAPLGDVELRALLVRARAQDDRPLVQLITSYVTLRRVMADVIASIEAREGGAAVARSPLLLRARELAGSLRHGRSVTSHPTSPS
Ga0209486_101152832	3300027886	Agricultural Soil	MIDEGASSADDGPLRDAELRELVVRARAHDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGGLHR
Ga0310813_102234612	3300031716	Soil	MTNASDAPIADAELRELLDRARAHDDPQLARLLTSYVTLRRVTADVIAAIEAKEGGAAVARSPLFLRARELSGALPR
Ga0307407_110299862	3300031903	Rhizosphere	VTPSEMIDEGASDADDAPLGDAELRELLVRARAHDDRRVVQLITSYVTLRRVMADVVASIEAREGGAAVARTPLLLRARELSS
Ga0308174_110924072	3300031939	Soil	DDEAVSAEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGATVARSPLLLRARELSSAPSR
Ga0308176_129598072	3300031996	Soil	AEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGATVARSPLLLRARELSSAPSR
Ga0308173_101882962	3300032074	Soil	MNDDEAVSAEGGPFADAELRELLARARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGATVARSPLLLRARELSSAPSR
Ga0310890_103942551	3300032075	Soil	DAELRELLVRARADDDRRLVQLITSYVTLRRVMADVIASIEAREGGAAVARTPLLLRARELSGSPDRKHSTLSHTPGES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences