Metagenome / Metatranscriptome Family F065644

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065644
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	65 residues
Representative Sequence	MKSIVTIIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Number of Associated Samples	105
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.31 %
% of genes near scaffold ends (potentially truncated)	26.77 %
% of genes from short scaffolds (< 2000 bps)	81.89 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (16.535 % of family members)
Environment Ontology (ENVO)	Unclassified (31.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.354 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.58% β-sheet: 0.00% Coil/Unstructured: 48.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF09084	NMT1	7.87
PF12840	HTH_20	6.30
PF00107	ADH_zinc_N	4.72
PF13340	DUF4096	3.15
PF08240	ADH_N	3.15
PF08281	Sigma70_r4_2	1.57
PF00440	TetR_N	1.57
PF01546	Peptidase_M20	1.57
PF08327	AHSA1	1.57
PF03972	MmgE_PrpD	1.57
PF00857	Isochorismatase	1.57
PF03401	TctC	0.79
PF00106	adh_short	0.79
PF01292	Ni_hydr_CYTB	0.79
PF13379	NMT1_2	0.79
PF02538	Hydantoinase_B	0.79
PF08818	DUF1801	0.79
PF07790	Pilin_N	0.79
PF01048	PNP_UDP_1	0.79
PF02803	Thiolase_C	0.79
PF04909	Amidohydro_2	0.79
PF00171	Aldedh	0.79
PF05118	Asp_Arg_Hydrox	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.87
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.87
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.57
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.57
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.57
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.57
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.79
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.79
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.79
COG3038	Cytochrome b561	Energy production and conversion [C]	0.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79
COG3430	Archaeal flagellin (archaellin), FlaG/FlaF family	Cell motility [N]	0.79
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.79
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.79
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.79
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.79
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.79
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.79
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.79
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.79
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.79
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.70 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.55 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.61 %
Unclassified	root	N/A	6.30 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	51.18 %
Unclassified	root	N/A	6.30 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.72 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	17.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.09 %
Unclassified	root	N/A	6.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.79 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	17.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.30 %
Unclassified	root	N/A	6.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	15.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.30 %
Unclassified	root	N/A	6.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	15.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.30 %
Unclassified	root	N/A	6.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig976562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	541	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0569697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1004986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2149	Open in IMG/M
3300000956\|JGI10216J12902_108915262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300001661\|JGI12053J15887_10012677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4648	Open in IMG/M
3300001661\|JGI12053J15887_10013621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4489	Open in IMG/M
3300001661\|JGI12053J15887_10019188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3815	Open in IMG/M
3300001661\|JGI12053J15887_10064542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2031	Open in IMG/M
3300001661\|JGI12053J15887_10118508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300001867\|JGI12627J18819_10076283	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300002568\|C688J35102_118684606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300002911\|JGI25390J43892_10035755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1195	Open in IMG/M
3300004267\|Ga0066396_10000486	All Organisms → cellular organisms → Bacteria → Proteobacteria	2948	Open in IMG/M
3300004633\|Ga0066395_10408161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300005166\|Ga0066674_10271829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300005167\|Ga0066672_10180758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300005172\|Ga0066683_10902960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300005184\|Ga0066671_10716901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300005332\|Ga0066388_100102295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3333	Open in IMG/M
3300005332\|Ga0066388_100484161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1875	Open in IMG/M
3300005332\|Ga0066388_102104950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1015	Open in IMG/M
3300005332\|Ga0066388_106181710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300005436\|Ga0070713_101348347	Not Available	691	Open in IMG/M
3300005437\|Ga0070710_11372332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300005555\|Ga0066692_10697414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300005568\|Ga0066703_10352731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300005713\|Ga0066905_100091822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2032	Open in IMG/M
3300005764\|Ga0066903_101703807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300006038\|Ga0075365_10216215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1344	Open in IMG/M
3300006755\|Ga0079222_11699999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300006797\|Ga0066659_11883803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300006800\|Ga0066660_10473054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1051	Open in IMG/M
3300006844\|Ga0075428_101328885	Not Available	756	Open in IMG/M
3300006845\|Ga0075421_100135240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3088	Open in IMG/M
3300006854\|Ga0075425_100500831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1399	Open in IMG/M
3300007788\|Ga0099795_10514303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300009089\|Ga0099828_10151900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2046	Open in IMG/M
3300009143\|Ga0099792_10029995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2511	Open in IMG/M
3300009143\|Ga0099792_10375046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300009156\|Ga0111538_10473339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1588	Open in IMG/M
3300009162\|Ga0075423_11567864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300010046\|Ga0126384_11022445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300010047\|Ga0126382_10065002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2208	Open in IMG/M
3300010154\|Ga0127503_10183586	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300010361\|Ga0126378_10633520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300010361\|Ga0126378_10922196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	979	Open in IMG/M
3300010366\|Ga0126379_10779836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054	Open in IMG/M
3300010398\|Ga0126383_12522050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300010400\|Ga0134122_10504328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300010401\|Ga0134121_12484440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300012180\|Ga0153974_1149181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	549	Open in IMG/M
3300012198\|Ga0137364_10131970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1791	Open in IMG/M
3300012200\|Ga0137382_10464674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300012200\|Ga0137382_10528811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300012200\|Ga0137382_10668838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300012202\|Ga0137363_11429515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	582	Open in IMG/M
3300012206\|Ga0137380_10209602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1765	Open in IMG/M
3300012208\|Ga0137376_10923996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	749	Open in IMG/M
3300012211\|Ga0137377_10046872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3981	Open in IMG/M
3300012211\|Ga0137377_10676575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300012212\|Ga0150985_114463130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	521	Open in IMG/M
3300012361\|Ga0137360_11228469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	648	Open in IMG/M
3300012685\|Ga0137397_10969483	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012923\|Ga0137359_11773997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	504	Open in IMG/M
3300012924\|Ga0137413_10069561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2104	Open in IMG/M
3300012955\|Ga0164298_10603747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300012957\|Ga0164303_11262934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300012957\|Ga0164303_11270576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	543	Open in IMG/M
3300012960\|Ga0164301_10190307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1298	Open in IMG/M
3300012971\|Ga0126369_10247925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1750	Open in IMG/M
3300012971\|Ga0126369_13002324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	552	Open in IMG/M
3300012984\|Ga0164309_10099882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1829	Open in IMG/M
3300012986\|Ga0164304_11514675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300012989\|Ga0164305_10036379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2756	Open in IMG/M
3300013306\|Ga0163162_11013566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	939	Open in IMG/M
3300016445\|Ga0182038_11211190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	673	Open in IMG/M
3300018027\|Ga0184605_10206891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	891	Open in IMG/M
3300018061\|Ga0184619_10125094	Not Available	1166	Open in IMG/M
3300018431\|Ga0066655_10483854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300018433\|Ga0066667_10268238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1306	Open in IMG/M
3300018468\|Ga0066662_12991475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	502	Open in IMG/M
3300018469\|Ga0190270_10126213	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300019873\|Ga0193700_1058402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	595	Open in IMG/M
3300019876\|Ga0193703_1044741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	682	Open in IMG/M
3300020140\|Ga0179590_1211038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300020579\|Ga0210407_10299803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1255	Open in IMG/M
3300020580\|Ga0210403_10774206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300021168\|Ga0210406_10089823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2620	Open in IMG/M
3300021170\|Ga0210400_10235320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1495	Open in IMG/M
3300021170\|Ga0210400_11380456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	562	Open in IMG/M
3300021363\|Ga0193699_10316602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300021418\|Ga0193695_1043239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	977	Open in IMG/M
3300021432\|Ga0210384_10937086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300021560\|Ga0126371_10366785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1577	Open in IMG/M
3300021560\|Ga0126371_10911695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1022	Open in IMG/M
3300022694\|Ga0222623_10133253	Not Available	968	Open in IMG/M
3300022726\|Ga0242654_10430699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300022756\|Ga0222622_10784833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300024288\|Ga0179589_10223255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300025906\|Ga0207699_10023764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3340	Open in IMG/M
3300025906\|Ga0207699_10587604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	810	Open in IMG/M
3300025910\|Ga0207684_10300516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1384	Open in IMG/M
3300027050\|Ga0209325_1001993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1867	Open in IMG/M
3300027181\|Ga0208997_1002981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1991	Open in IMG/M
3300027383\|Ga0209213_1035494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300027383\|Ga0209213_1060586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300027388\|Ga0208995_1094617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	520	Open in IMG/M
3300027480\|Ga0208993_1002997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2757	Open in IMG/M
3300027480\|Ga0208993_1018061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1234	Open in IMG/M
3300027527\|Ga0209684_1004365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2394	Open in IMG/M
3300027546\|Ga0208984_1020028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1350	Open in IMG/M
3300027546\|Ga0208984_1052367	Not Available	871	Open in IMG/M
3300027548\|Ga0209523_1015809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1442	Open in IMG/M
3300027633\|Ga0208988_1044430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1138	Open in IMG/M
3300027681\|Ga0208991_1036945	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300027681\|Ga0208991_1063194	Not Available	1117	Open in IMG/M
3300027738\|Ga0208989_10168349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300027738\|Ga0208989_10242060	Not Available	589	Open in IMG/M
3300027909\|Ga0209382_10056057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4684	Open in IMG/M
3300028716\|Ga0307311_10055206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1061	Open in IMG/M
3300028782\|Ga0307306_10067032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	918	Open in IMG/M
3300028811\|Ga0307292_10269420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	709	Open in IMG/M
3300028819\|Ga0307296_10798789	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300028878\|Ga0307278_10126600	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300028881\|Ga0307277_10001160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10233	Open in IMG/M
3300028885\|Ga0307304_10288015	Not Available	723	Open in IMG/M
3300031720\|Ga0307469_10031820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3074	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.13%
Host-Associated	Host-Associated	7.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.19%
Plants	Host-Associated → Plants	7.09%
Aquatic	Environmental → Aquatic	3.94%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%
Sediment	Environmental → Aquatic → Sediment	3.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.84%
Loam	Environmental → Terrestrial → Soil → Loam	28.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_08396480	2124908045	Soil	GLLAVAFAASADAAPKKSGSAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
ICChiseqgaiiDRAFT_05696971	3300000033	Soil	MKSIITIVAASLLAGAFAVSADAAAKKHGXAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMH
AF_2010_repII_A01DRAFT_10049865	3300000580	Forest Soil	MKSILTILVAGLLAGSFAISADAASKKSGMAQLKAQCEAQAKKKYSAIHFLKRRDYVKNCMNRKA*
JGI10216J12902_1089152621	3300000956	Soil	MKSIVTVIAAGLLASAFAMSADAAAKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
JGI12053J15887_100126773	3300001661	Forest Soil	MKSTFTIIAVGLLAGSLATSADAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA*
JGI12053J15887_100136213	3300001661	Forest Soil	MKSGFIIAAAGLLITPFAMSANAAPKTKDPAVAQHQAECQAQAKKKYSAIHFLKRHAFVKNCMNQKA*
JGI12053J15887_100191881	3300001661	Forest Soil	MKSAFTIVAVGLLANSLAASADAATPRKNIGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA
JGI12053J15887_100645425	3300001661	Forest Soil	MKSTLTIIAVSLLASSLATSAGAATQRKNAGMAQLKAQCEAQAKKKYSAIHFLKRRAFVKSCINQKA*
JGI12053J15887_101185081	3300001661	Forest Soil	MKSTFTIIAVGLLASSLATSADAATQRKSPGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMSQKA*
JGI12627J18819_100762831	3300001867	Forest Soil	MKSIVTIIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
C688J35102_1186846062	3300002568	Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
JGI25390J43892_100357552	3300002911	Grasslands Soil	MKSILTIMAAGLLAGSFSMSADAATKKSGMTQVKAQCEAQAKKKFSAIHFLKRRDYVKNCMNQKA*
Ga0066396_100004861	3300004267	Tropical Forest Soil	MKSIVTIIAAGLMAGSFAISADAGTKHSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA*
Ga0066395_104081611	3300004633	Tropical Forest Soil	MKSISIVTIIAAGLMAGSFAISADAGTKHSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA*
Ga0066674_102718292	3300005166	Soil	MKSIVTVIAAGLLAGAFAMSADAATKKSGMAQVKAQCEAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0066672_101807581	3300005167	Soil	MKSIITIVAAGLLAGALAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0066683_109029602	3300005172	Soil	VIAAGLLAGAFAMSADAATKKSGMAQVKAQCEAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0066671_107169012	3300005184	Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKSCMHQKA*
Ga0066388_1001022951	3300005332	Tropical Forest Soil	MKSILTIFVAGLLAGSFAISADAATKKSGMAQAKAQCEAQAKKKYSAIHFLKRRDYVKNCMNRKA*
Ga0066388_1004841612	3300005332	Tropical Forest Soil	MKSILTILVAGLLAGSFAISADAASKKSGMAQLKAQCEAQAKKKYSAIHFLKRHDYVKNCMNRKA*
Ga0066388_1021049502	3300005332	Tropical Forest Soil	MKSIITIVAAGLLASAVAMSADAATKKSPGMAQLQAQCQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0066388_1061817101	3300005332	Tropical Forest Soil	MKSIFTIVAAGLLASAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0070713_1013483472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0070710_113723322	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0066692_106974142	3300005555	Soil	MKSIMTIIAAGLLAGSFAISADAATKKSGMAEVKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQKA*
Ga0066703_103527312	3300005568	Soil	TIIAAGLLAGSFAISADAATKKSGMAEVKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQKA
Ga0066905_1000918222	3300005713	Tropical Forest Soil	MKSIVTIIAAGLMTGSFAISADAGTKHSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA*
Ga0066903_1017038073	3300005764	Tropical Forest Soil	MKSIITIVAAGLLASAFAMSADAATKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0075365_102162153	3300006038	Populus Endosphere	MKSIVTIVTAGLLSVAFAVSADAAPKKSGSAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0079222_116999992	3300006755	Agricultural Soil	MKSIITLVMAGVLAGAFALSAEAAAKKSGSAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0066659_118838031	3300006797	Soil	MKSIITIVAAGLLAGALAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMH
Ga0066660_104730541	3300006800	Soil	MKSIVTVIAAGLLAGAFAMSADAATKKSGMAQVKAQCEAQAKKKYSAIHFLKRRD
Ga0075428_1013288851	3300006844	Populus Rhizosphere	MKSIVTVVAAGLLAGAFAVSAEAAKKPGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0075421_1001352403	3300006845	Populus Rhizosphere	MKSILMTIAAALLATTFAVSADAATKKKGTAMTAKQQACVEQAKKKYSAIHFLKRRAAEKKCMGTA*
Ga0075425_1005008312	3300006854	Populus Rhizosphere	MKSIVTVIAAGLLAGALAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0099795_105143031	3300007788	Vadose Zone Soil	GPTMKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA*
Ga0099828_101519003	3300009089	Vadose Zone Soil	MKSIVTVIAAGLLVSAFAMSADAAAKKKSAGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0099792_100299953	3300009143	Vadose Zone Soil	MKTVFTVLAAALLASSFAMSADAAAKTKNRVIAQRQAECQAQAKQKYSAIHFLKRRAFVKNCMNQKA*
Ga0099792_103750462	3300009143	Vadose Zone Soil	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA*
Ga0111538_104733392	3300009156	Populus Rhizosphere	MKSIVTIVTIVTAGLLAVAFAASADAAPKKSGSAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0075423_115678641	3300009162	Populus Rhizosphere	MKSIITIVTAGLLAVAFAASADAAPKKSGSAQLQAQCQAQAKKKYSAIHFLKRLDYVKNCMHQKA*
Ga0126384_110224451	3300010046	Tropical Forest Soil	MKSILTILVAGLLAGSFAISADAASKKSGMAQVKAQCEAQAKKKYSAIHFLKRRDYVKNCMNRKA*
Ga0126382_100650022	3300010047	Tropical Forest Soil	MKYIVTIIAAGLMAGSFAISADAGTKHSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA*
Ga0127503_101835861	3300010154	Soil	LPMKSIVTIVAAGLLAGAFVVSADAAAKKSGAAQLQAHCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0126378_106335202	3300010361	Tropical Forest Soil	MPMKSILTILVAGLLAGSFAISADAASKKSGMAQLKAQCEAQAKKKYSAIHFLKRRDYVKNCMNKKA*
Ga0126378_109221962	3300010361	Tropical Forest Soil	MKSIVTIVAAGLLAGAFVISADAATKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0126379_107798361	3300010366	Tropical Forest Soil	MKSILTILVAGLLAGSFAISADAASKKSGMAQLKAQCEAQAKKKYSAIHFLKRRDYVKNCMNKKA*
Ga0126383_125220502	3300010398	Tropical Forest Soil	LAGSFAISADAASKKSGMAQLKAPCEAQAKKKYSAIHFLKRRDYVKNCMNRKA*
Ga0134122_105043281	3300010400	Terrestrial Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRHAFVKSCMNQKA*
Ga0134121_124844401	3300010401	Terrestrial Soil	LFSRPRGGLPTKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0153974_11491811	3300012180	Attine Ant Fungus Gardens	MKSIVTVIAAGLLAGAFAMSADAATKKKSPGMAQLQAQGQAQAKKKYSAIHFHKRRDYVKNCMHQKA*
Ga0137364_101319701	3300012198	Vadose Zone Soil	RPMKSILTIMAAGLLAGSFSMSADAATKKSGMTQVKAQCEAQAKKKFSAIHFLKRRDYVKNCMNQKA*
Ga0137382_104646742	3300012200	Vadose Zone Soil	MKSIFTIVAAGLLAGSFAMSADAATKKSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0137382_105288112	3300012200	Vadose Zone Soil	MKSIVTIVAAGLLAGAFVVSADAAAKKSGAAQLQAHCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0137382_106688381	3300012200	Vadose Zone Soil	MKSIVTVIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0137363_114295151	3300012202	Vadose Zone Soil	MESLFTIVAAGLLASSFAVSADAAAKKKEPAMAQHQAKCQAQAKKKYSAIHFLKRHAFVKSCMNQKA*
Ga0137380_102096022	3300012206	Vadose Zone Soil	MTIIAAGLLAGSFAISADAATKKSGMAEVKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQKA*
Ga0137376_109239962	3300012208	Vadose Zone Soil	MKSIITIVAAGLLAGALAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVK
Ga0137377_100468725	3300012211	Vadose Zone Soil	MKSLVTIIAAGLLAGSFAISADAATKKSGMAEVKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQKA*
Ga0137377_106765752	3300012211	Vadose Zone Soil	MKSIITIFAAGLLAGAFFMSAEAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0150985_1144631301	3300012212	Avena Fatua Rhizosphere	TIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA*
Ga0137360_112284691	3300012361	Vadose Zone Soil	MKSIVTVIAAGLLVSSFAMSADAAAKKSGMAQVKAQCEAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0137397_109694833	3300012685	Vadose Zone Soil	YAASSQGGPTMKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA*
Ga0137359_117739971	3300012923	Vadose Zone Soil	MKSIVTIVAAGLLAGAFAMSADAAAKKSPGMAQLQAQCQAQAKKKYSALHFLKRRDYVKHCMHQKA*
Ga0137413_100695613	3300012924	Vadose Zone Soil	LASSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA*
Ga0164298_106037472	3300012955	Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYV
Ga0164303_112629342	3300012957	Soil	ASLLAGAFAVSADAAAKKQGTAQLQAQRQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0164303_112705761	3300012957	Soil	MKSIVTIIAVGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKHCMHQKA*
Ga0164301_101903073	3300012960	Soil	MKSIVTIVAASLPAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0126369_102479252	3300012971	Tropical Forest Soil	MKSIVTIVAAGLLASAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA*
Ga0126369_130023241	3300012971	Tropical Forest Soil	MKSILTILVAGLLAGSFAISADAASKKSGMAQLKAQCEAQAKKKYSAIHFLKRRDYVKNC
Ga0164309_100998822	3300012984	Soil	MKSIVTIIAVGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0164304_115146752	3300012986	Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKHCMHQKA*
Ga0164305_100363793	3300012989	Soil	MKSIVTIVASSLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0163162_110135663	3300013306	Switchgrass Rhizosphere	KSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA*
Ga0182038_112111901	3300016445	Soil	MKSIVAVIAAGLFASAFAMSADAAAKKSGMAQVKAQCEVQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0184605_102068911	3300018027	Groundwater Sediment	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0184619_101250942	3300018061	Groundwater Sediment	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0066655_104838542	3300018431	Grasslands Soil	MKSILTIMAAGLLAGSFSMSADAATKKSGMTQVKAQCEAQAKKKFSAIHFLKRRDYVKNCMHQKA
Ga0066667_102682382	3300018433	Grasslands Soil	MKSILTIMAAGLLAGSFSMSADAATKKSGMTQVKAQCEAQAKKKFSAIHFLKRRDYVKNCMNQKA
Ga0066662_129914751	3300018468	Grasslands Soil	MKSIITIVAAGLLAGALAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0190270_101262133	3300018469	Soil	MKSILTTIAAALLATSFAVSADAATKKKGTAMTAKQQACVEQAKKKYSAIHFLKRRAAEKKCMATA
Ga0193700_10584021	3300019873	Soil	MKSTFTIIAIGFLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0193703_10447411	3300019876	Soil	MKSAITIIAVGLLASSLTTSADAATQRKSAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0179590_12110382	3300020140	Vadose Zone Soil	VTIVAASLLAGVFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQR
Ga0210407_102998031	3300020579	Soil	MKSIVTIVAAGLLAGAFTVSADAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVK
Ga0210403_107742061	3300020580	Soil	MKSIVTIVAAGLLAGAFTVSADAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0210406_100898232	3300021168	Soil	MKSIVTIIAVGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKHCMHQKA
Ga0210400_102353202	3300021170	Soil	MKSVVTIIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0210400_113804561	3300021170	Soil	PMKSIVTIVAAGLLAGAFTVSADAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0193699_103166021	3300021363	Soil	IVAAGLLACSFTMSAGAATKKGSGMAHQAECQAQAKKKYSAIHFLKRRSFVKNCMNQKA
Ga0193695_10432391	3300021418	Soil	MKSTFTIIAVGLLASSLATSADAATQRKDAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0210384_109370861	3300021432	Soil	MKSIVTFVAAGLLAGAFTVSADAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0126371_103667853	3300021560	Tropical Forest Soil	MKSIITIVAAGLLASAFAMSADAATKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0126371_109116951	3300021560	Tropical Forest Soil	MKSIVTIIAAGLMAGSFAISADAGTKHSGMAERKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA
Ga0222623_101332532	3300022694	Groundwater Sediment	MKSAITIIAVGLLASSLTTSADAATQRKSAGMAQLQAQCQAQAKKKYSAIHFVKRRAFVKSCINQKA
Ga0242654_104306991	3300022726	Soil	MRSIVTIIAVGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRHAFVKSCMNQKA
Ga0222622_107848332	3300022756	Groundwater Sediment	MKSMFTIVAAGLLACSFSMSAGAATKKGSGMAQHQAECQAQAKKKYSAIHFLKRRAFVKNCMNQKA
Ga0179589_102232552	3300024288	Vadose Zone Soil	MKSIVTIVAASLLAGVFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0207699_100237641	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRR
Ga0207699_105876041	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0207684_103005162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIVTVIAAGLLAGAFAMSADAATKKSGMAQVKAQCEAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0209325_10019932	3300027050	Forest Soil	MKSIVTIIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0208997_10029813	3300027181	Forest Soil	MKSTITIIAIGLLASSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0209213_10354942	3300027383	Forest Soil	MKSTLTIIAVSLLASSLATSAGAATQRKNAGMAQLKAQCEAQAKKKYSAIHFLKRRAFVKSCINQKA
Ga0209213_10605861	3300027383	Forest Soil	MKSAITIIAIGLLASSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA
Ga0208995_10946171	3300027388	Forest Soil	MKSGFIIAAAGLLITPFAMSANAAPKTKDPAVAQHQAECQAQAKKKYSAIHFLKRHAFVKNCMNQKA
Ga0208993_10029972	3300027480	Forest Soil	MKSVFTIIAAGLLACSFATSAGAAAKTKDPGMAQRQAECQAQAKKKYSAIHFLKRRAFVKNCMSQKT
Ga0208993_10180613	3300027480	Forest Soil	MKSTLTIIAVSLLASSLATSAGAATQRKNAGMAQLKAQCEAQAKKKYSAIHFLKRRAFVKSCMSQKA
Ga0209684_10043653	3300027527	Tropical Forest Soil	MKSIVTIIAAGLMAGSFAISADAGTKHSGMAELKAQCQAQAKKKYSAIHFLKRRDYVKNCMNQRA
Ga0208984_10200283	3300027546	Forest Soil	MKSLFSIVAACLLAGSFAVSADAAAKKKGPAMAQHQAECQAQAKKKYSAIHFLKRHAFVKSCVNQKA
Ga0208984_10523672	3300027546	Forest Soil	MKSAITIIAIGLLASSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0209523_10158092	3300027548	Forest Soil	MKSIVTVIAAGLLAGAFAMSADAATKKKSPGMAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQKA
Ga0208988_10444302	3300027633	Forest Soil	MKSTITIIAIGLLASSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA
Ga0208991_10369452	3300027681	Forest Soil	MKSLFTIVAACLLAGSFAVSADAAAKKKGPAMAQHQAECQAQAKKKYSAIHFLKRHAFVKSCVNQKA
Ga0208991_10631941	3300027681	Forest Soil	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQAQCQAQAKTKYSAIHFLKRRAFVKSCMNQKA
Ga0208989_101683491	3300027738	Forest Soil	MKSTFTIIAVGLLASSLATSADAATQRKSPGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMSQKA
Ga0208989_102420601	3300027738	Forest Soil	MKSTFAIIAVGLLAGSLATSADAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKR
Ga0209382_100560572	3300027909	Populus Rhizosphere	MKSILMTIAAALLATTFAVSADAATKKKGTAMTAKQQACVEQAKKKYSAIHFLKRRAAEKKCMGTA
Ga0307311_100552062	3300028716	Soil	MKSTFTIIAIGFLASSLATSADAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA
Ga0307306_100670321	3300028782	Soil	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMNQKA
Ga0307292_102694202	3300028811	Soil	MKSAITIIAVGLLASSLTTSADAATQRKSAGMAQLQAQCQAQAKKKYSAIHFMK
Ga0307296_107987891	3300028819	Soil	MKSTITIIAIGLLATSLTTSAGAATQRKNAGMAQLQAQCQAQAKKKYSAIHFLKRRAFVKSCMHQKA
Ga0307278_101266002	3300028878	Soil	MKSILTIVAAGLLAGSFAMSADAATKKFAMTQVKAQCEAQAKKKFSAIHFLKRRDYVKNCMHQKA
Ga0307277_100011605	3300028881	Soil	MKFIVTIVASSLLAGAFAVSAEAAKKPGTAQLQAQCQAQAKKKYSAIHFLKRRDYVKNCMHQRA
Ga0307304_102880151	3300028885	Soil	MKSTFTIIAVGLLASSLATSADAATQRKNAGMAQLQTQCQAQAKKKYSAIHFLKRRAFVKSCMHQ
Ga0307469_100318205	3300031720	Hardwood Forest Soil	MKSIVTIVAASLLAGAFAVSADAAAKKHGTAQLQAQCQAQAKKKYSAIHFLKRHAFVKSCMNQKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065644

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences